mRNA_H-elongata_contig48919.12064.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48919.12064.1
Unique NamemRNA_H-elongata_contig48919.12064.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: D8LK56_ECTSI (Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK56_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 1.110e-167
Identity = 231/258 (89.53%), Postives = 247/258 (95.74%), Query Frame = 1
Query:    1 LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            L EA RKDP+STDFLESL+D+LPALAPVFDRAPKYAWIAKQLLEPER IQFRVAWLDDNGNSRMNRG+RVQYSSALGPYEGGLH  GGMSSDG KALGMETVF NALTG NLGAAAGGADFNPHNKSEAEIQRFCQS+MTE++KYIGPDLD+PSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGA  YPEATG+GVVEFA+C+L DKGD+L+GKRCLITGSGKVA+HVAE+LLQLGAIPLTFSDSSGHIYEP+
Sbjct:   96 LQEALRKDPHSTDFLESLQDLLPALAPVFDRAPKYAWIAKQLLEPERAIQFRVAWLDDNGNSRMNRGFRVQYSSALGPYEGGLHFVGGMSSDGCKALGMETVFANALTGSNLGAAAGGADFNPHNKSEAEIQRFCQSYMTEMTKYIGPDLDVPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAMPYPEATGYGVVEFARCMLEDKGDSLKGKRCLITGSGKVAVHVAEKLLQLGAIPLTFSDSSGHIYEPE 353          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A836CHL3_9STRA (Glutamate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL3_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 3.850e-141
Identity = 194/258 (75.19%), Postives = 225/258 (87.21%), Query Frame = 1
Query:    1 LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            L  A +KDP+ST+FLE+LED LPAL P+ DR PKYAWIAKQLLEPER IQFRVAWLDD G SRMNRG+R QYSS LGPYEGGLH +G +SS   KALG+ETVF N+L+GC+LGAA+GGADFNPHNKSE+E QRFCQS+MTELSKYIGPD+D+PSMGYGVGLPEVGYLYGQYKR+NDHVAQ+GRGVLWGG   YPE  G GVV FA  +L DKGD+L+GKRCL+TGSGK+A+ +A +LL+LGAIP++FSDS+GHI E D
Sbjct:   53 LLAAHKKDPHSTEFLETLEDTLPALIPLLDRQPKYAWIAKQLLEPERAIQFRVAWLDDMGYSRMNRGWRTQYSSTLGPYEGGLHFNGNLSSAQVKALGLETVFTNSLSGCSLGAASGGADFNPHNKSESETQRFCQSYMTELSKYIGPDMDIPSMGYGVGLPEVGYLYGQYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETD 310          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A835YWP2_9STRA (Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWP2_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 4.110e-141
Identity = 194/258 (75.19%), Postives = 225/258 (87.21%), Query Frame = 1
Query:    1 LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            L  A +KDP+ST+FLE+LED LPAL P+ DR PKYAWIAKQLLEPER IQFRVAWLDD G SRMNRG+R QYSS LGPYEGGLH +G +SS   KALG+ETVF N+L+GC+LGAA+GGADFNPHNKSE+E QRFCQS+MTELSKYIGPD+D+PSMGYGVGLPEVGYLYGQYKR+NDHVAQ+GRGVLWGG   YPE  G GVV FA  +L DKGD+L+GKRCL+TGSGK+A+ +A +LL+LGAIP++FSDS+GHI E D
Sbjct:   72 LLAAHKKDPHSTEFLETLEDTLPALIPLLDRQPKYAWIAKQLLEPERAIQFRVAWLDDMGYSRMNRGWRTQYSSTLGPYEGGLHFNGNLSSAQVKALGLETVFTNSLSGCSLGAASGGADFNPHNKSESETQRFCQSYMTELSKYIGPDMDIPSMGYGVGLPEVGYLYGQYKRVNDHVAQKGRGVLWGGIPLYPEGVGHGVVYFANEMLRDKGDSLKGKRCLVTGSGKLALSIAGKLLELGAIPISFSDSNGHIVETD 329          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A4D9CY97_9STRA (Glutamate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY97_9STRA)

HSP 1 Score: 364 bits (935), Expect = 2.370e-121
Identity = 165/258 (63.95%), Postives = 213/258 (82.56%), Query Frame = 1
Query:    1 LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            + E +R+D +  DF++  E+ L  LAPVF+R PKYA++AK+ LEPER+ QFRV+WLDD+G+ RMNRG+RVQYSSALGP+EGGLH H  +++   K++    VF NALTGC +GAA GGADFNP NKSEAEIQRFCQ++MTELSKYIGPD D+P +G GVG  E+GYLYGQYKR++ H AQ+G+G+LWGG + +P+AT  GVV +A  +L  KGD+LEGKRCLITGSGK+A+HVAE+L+++GA+PLT SD+SGH+YEPD
Sbjct:   84 INEVKRRDSHEKDFVQVFENALQTLAPVFERIPKYAFVAKEFLEPERIFQFRVSWLDDSGSYRMNRGFRVQYSSALGPFEGGLHFHKDVNAGMVKSMAFARVFTNALTGCEMGAAVGGADFNPMNKSEAEIQRFCQAYMTELSKYIGPDQDLPGVGTGVGAREIGYLYGQYKRMSIHHAQKGKGLLWGGVYPFPQATASGVVHWAARVLEGKGDSLEGKRCLITGSGKMALHVAEKLVEMGAVPLTLSDTSGHVYEPD 341          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A6V1RCQ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RCQ3_HETAK)

HSP 1 Score: 357 bits (917), Expect = 1.490e-118
Identity = 166/257 (64.59%), Postives = 206/257 (80.16%), Query Frame = 1
Query:    4 TEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            +EA RKD +  +F++S    +  ++PVFDR+PK+AWIAK LLEPER IQFRVAWLDD G +R+NRG+R+QY+SALGPYEGG H    +++   KAL ++  F NALTG N+GAA GG+DFNPH KSEAEIQRFCQS+MTELSKYIGPDLD+P MG   G  E+GY+YGQYKR ++H++  GRG+LWGGA  +P  TGFGV  FA+ +L DKG++L+GKRCLITGSGK A  VA +LL+ GA+PLTFSDSSGHIYEPD
Sbjct:   90 SEAIRKDGHQDEFIQSWSSTMDIISPVFDRSPKFAWIAKLLLEPERFIQFRVAWLDDQGTARINRGFRLQYNSALGPYEGGTHFGMNVNTSVLKALALDRTFTNALTGANMGAAVGGSDFNPHGKSEAEIQRFCQSYMTELSKYIGPDLDIPGMGLSAGPSEIGYMYGQYKRTHNHISHLGRGLLWGGAPPFPHCTGFGVAHFAQQMLEDKGESLKGKRCLITGSGKNAQAVARKLLEFGAVPLTFSDSSGHIYEPD 346          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A7S2RRL7_9STRA (Glutamate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL7_9STRA)

HSP 1 Score: 337 bits (864), Expect = 2.360e-111
Identity = 169/256 (66.02%), Postives = 197/256 (76.95%), Query Frame = 1
Query:    7 EARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            EA R+D   T FL++    L +LAPVFDR PKYAWIAKQL+EPER+IQFRVAWLDD G  RMNRG R+QYSS LGPYEG LH    + +D  KA+  +T+  NA+ G + G AAGGADF+P NKSEAEIQRFCQSFMTELSK+IGPD DMPSMG GVG  E+GY+YGQYKRI D  A++G G LWGG   +  A G GV  FA+ +L DK +TL+GKR LITGSG +A+ VAERLLQ GAIP+TFSDSSGHIYE D
Sbjct:   30 EATRRDQSQTLFLQTFSSTLTSLAPVFDRNPKYAWIAKQLIEPERLIQFRVAWLDDMGILRMNRGIRIQYSSTLGPYEGSLHFGPNVDTDFVKAVSFDTLGMNAVAGMDFGGAAGGADFDPSNKSEAEIQRFCQSFMTELSKHIGPDHDMPSMGIGVGEAEIGYMYGQYKRIKDIGAKQGSGFLWGGRVPWRFAYGHGVAHFAERMLRDKKETLQGKRVLITGSGNIALGVAERLLQFGAIPVTFSDSSGHIYEQD 285          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A7S2E2V9_9STRA (Glutamate dehydrogenase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2V9_9STRA)

HSP 1 Score: 333 bits (853), Expect = 3.040e-109
Identity = 159/256 (62.11%), Postives = 200/256 (78.12%), Query Frame = 1
Query:    7 EARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            EA+R+D     FL + +  L ++AP+FDR PKYAWIAKQL+EPER++QFRVAWLDD G SRMNRGYR+QYSS LGPY G L+ +  + SD  K+ G + V  N+++G ++GAA+GGADFNP NKS+AEIQRF QSFMTELSKYIGPD+D+P  G GV   E+GY+YGQYKRIN  VA RG G+LWGG   +  A GFGVV FA+ +L+DK D+LEGKRC++TGSG +A+ VA++L +LGA  LT SDSSG+IYE D
Sbjct:   62 EAKRRDGNLPKFLCTFQSTLRSIAPLFDRNPKYAWIAKQLIEPERMVQFRVAWLDDTGVSRMNRGYRMQYSSTLGPYHGSLNFNARVDSDFIKSQGFDAVLTNSISGLDIGAASGGADFNPKNKSDAEIQRFSQSFMTELSKYIGPDIDLPGPGLGVSATEIGYMYGQYKRINSSVAGRGTGILWGGQMKWKAAPGFGVVYFAQAMLNDKSDSLEGKRCVVTGSGMMAMSVAKKLCELGATVLTLSDSSGYIYEQD 317          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A6V2ALV2_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2ALV2_9STRA)

HSP 1 Score: 330 bits (846), Expect = 6.640e-108
Identity = 158/258 (61.24%), Postives = 202/258 (78.29%), Query Frame = 1
Query:    1 LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            + EA+R+D + T+F++S+   L  L+P+FDR P+YA++AK L+EPER IQFRVAW+DD G  RMNRGYR+QYSS++GPYEG LH    ++S   KALG  +VF NALTG ++GAA GG+D NP +KSEAEIQRFCQS+MTEL+KYIGPD D P+ G GVG  E+GYL+GQYKRI    +  G+  L G   F+ +A G+G+V FAK +L+DKGDTL+GKRCLI G+GKVA  VA++LL+ GAIPLTFSD SGH+YEPD
Sbjct:   93 VAEAKRRDSHETEFIDSVRSTLQCLSPIFDRNPRYAFVAKGLMEPERFIQFRVAWIDDVGVVRMNRGYRIQYSSSIGPYEGSLHFGHHVNSGVIKALGFNSVFSNALTGFDVGAAVGGSDINPFDKSEAEIQRFCQSYMTELAKYIGPDHDQPTQGMGVGEREIGYLFGQYKRITARSSSNGKPFLAGAGSFF-QAPGYGIVHFAKEMLNDKGDTLQGKRCLILGAGKVARSVAQKLLEYGAIPLTFSDESGHLYEPD 349          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A6U1R710_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1R710_CYCTE)

HSP 1 Score: 322 bits (824), Expect = 2.310e-105
Identity = 154/256 (60.16%), Postives = 202/256 (78.91%), Query Frame = 1
Query:    7 EARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            EARR+D + T+F+ES++  +  L+P+FDR P+YA++AKQL+EPER +QFRVAW+DD G  RMNRGYR+QYSS++GP++G LH    ++S   KA+G ++VF NA+TG ++GAAAGG+DF P +KSEAE+QRFCQS+MTEL+KY+GPD+D P MG GVG  E+GYL+GQYKRI    +  GR  L      +  A GFGVV FAK +L D+ D+LEGKRCLI GSGKVA  VAE+L++ GAIPL+FSD+SGH+YEPD
Sbjct:   34 EARRRDDHETEFIESIQSTMQCLSPIFDRNPRYAFVAKQLMEPERFVQFRVAWIDDVGVVRMNRGYRIQYSSSMGPHQGALHFGKHVNSAVVKAMGFDSVFSNAVTGFDVGAAAGGSDFYPEDKSEAELQRFCQSYMTELAKYVGPDIDSPWMGMGVGEVEMGYLFGQYKRIGIKSSAVGRPFLSFRNKTFHSAPGFGVVHFAKEMLKDRHDSLEGKRCLILGSGKVARCVAEKLIEYGAIPLSFSDASGHVYEPD 289          
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Match: A0A7S2U9C4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9C4_9STRA)

HSP 1 Score: 323 bits (829), Expect = 4.560e-105
Identity = 157/258 (60.85%), Postives = 199/258 (77.13%), Query Frame = 1
Query:    1 LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQFRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGMETVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDLDMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFGVVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDSSGHIYEPD 774
            + EA+R+D + T+F+ES+E  +  L+P+FDR P+YA++AKQL+EPER IQFRV W+DD G  RMNRGYR QYSS+LGPYEG LH    +++   K+LG ++VF NALTG  LGAA GG+D NP +KSEAE+QRFCQS+MTEL+KYIGPD+D P+MG GVG  E+GYL+GQYKRI+   +  GR  L  GA   PEA G+ V  FA  ++  K D+L+GKRC+I GSGKVA  +AE+LL+ GAIPLTFSD SGHIYEPD
Sbjct:  114 VAEAKRRDSHETEFIESVESTMQCLSPIFDRNPRYAFVAKQLMEPERFIQFRVPWMDDTGVVRMNRGYRCQYSSSLGPYEGSLHFGHHVNTAVVKSLGFDSVFSNALTGFPLGAAVGGSDINPFDKSEAEMQRFCQSYMTELAKYIGPDIDCPTMGMGVGEKEIGYLFGQYKRISVKSSAGGRPFLMNGA-MQPEAPGYAVAHFANEMMKHKHDSLQGKRCMIIGSGKVARALAEKLLEYGAIPLTFSDGSGHIYEPD 370          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48919.12064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK56_ECTSI1.110e-16789.53Glutamate dehydrogenase 1 (NADP-dependent) n=2 Tax... [more]
A0A836CHL3_9STRA3.850e-14175.19Glutamate dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
A0A835YWP2_9STRA4.110e-14175.19Glutamate dehydrogenase 1 (NADP-dependent) n=1 Tax... [more]
A0A4D9CY97_9STRA2.370e-12163.95Glutamate dehydrogenase n=2 Tax=Monodopsidaceae Ta... [more]
A0A6V1RCQ3_HETAK1.490e-11864.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RRL7_9STRA2.360e-11166.02Glutamate dehydrogenase n=2 Tax=Rhizochromulina ma... [more]
A0A7S2E2V9_9STRA3.040e-10962.11Glutamate dehydrogenase n=1 Tax=Dictyocha speculum... [more]
A0A6V2ALV2_9STRA6.640e-10861.24Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID... [more]
A0A6U1R710_CYCTE2.310e-10560.16Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2U9C4_9STRA4.560e-10560.85Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48919contigH-elongata_contig48919:827..2941 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue8.5e-134
Seed eggNOG ortholog2880.D8LK56
KEGG rclassRC00006,RC02799
KEGG koko:K00262
KEGG ReactionR00248
KEGG Pathwayko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100
EggNOG free text desc.glutamate dehydrogenase [NAD(P) ] activity
EggNOG OGsCOG0334@1,KOG2250@2759
EC1.4.1.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlutamate dehydrogenase 1 (NADP-dependent)
Ec32 orthologEc-06_008240.1
Exons7
Model size774
Cds size774
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930804.969092-CDS-H-elongata_contig48919:826..9161622930804.969092-CDS-H-elongata_contig48919:826..916Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 827..916 -
1691679577.7360013-CDS-H-elongata_contig48919:826..9161691679577.7360013-CDS-H-elongata_contig48919:826..916Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 827..916 -
1622930804.9872146-CDS-H-elongata_contig48919:1060..11591622930804.9872146-CDS-H-elongata_contig48919:1060..1159Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1061..1159 -
1691679577.7487173-CDS-H-elongata_contig48919:1060..11591691679577.7487173-CDS-H-elongata_contig48919:1060..1159Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1061..1159 -
1622930805.0059981-CDS-H-elongata_contig48919:1320..14161622930805.0059981-CDS-H-elongata_contig48919:1320..1416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1321..1416 -
1691679577.7573426-CDS-H-elongata_contig48919:1320..14161691679577.7573426-CDS-H-elongata_contig48919:1320..1416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1321..1416 -
1622930805.0247214-CDS-H-elongata_contig48919:1723..18141622930805.0247214-CDS-H-elongata_contig48919:1723..1814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1724..1814 -
1691679577.7690046-CDS-H-elongata_contig48919:1723..18141691679577.7690046-CDS-H-elongata_contig48919:1723..1814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1724..1814 -
1622930805.0462763-CDS-H-elongata_contig48919:1967..20801622930805.0462763-CDS-H-elongata_contig48919:1967..2080Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1968..2080 -
1691679577.7792232-CDS-H-elongata_contig48919:1967..20801691679577.7792232-CDS-H-elongata_contig48919:1967..2080Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 1968..2080 -
1622930805.0613353-CDS-H-elongata_contig48919:2388..25141622930805.0613353-CDS-H-elongata_contig48919:2388..2514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 2389..2514 -
1691679577.792759-CDS-H-elongata_contig48919:2388..25141691679577.792759-CDS-H-elongata_contig48919:2388..2514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 2389..2514 -
1622930805.080989-CDS-H-elongata_contig48919:2782..29411622930805.080989-CDS-H-elongata_contig48919:2782..2941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 2783..2941 -
1691679577.8036668-CDS-H-elongata_contig48919:2782..29411691679577.8036668-CDS-H-elongata_contig48919:2782..2941Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48919 2783..2941 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48919.12064.1prot_H-elongata_contig48919.12064.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48919 827..2941 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48919.12064.1

>prot_H-elongata_contig48919.12064.1 ID=prot_H-elongata_contig48919.12064.1|Name=mRNA_H-elongata_contig48919.12064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=258bp
LTEARRKDPYSTDFLESLEDILPALAPVFDRAPKYAWIAKQLLEPERVIQ
FRVAWLDDNGNSRMNRGYRVQYSSALGPYEGGLHLHGGMSSDGYKALGME
TVFCNALTGCNLGAAAGGADFNPHNKSEAEIQRFCQSFMTELSKYIGPDL
DMPSMGYGVGLPEVGYLYGQYKRINDHVAQRGRGVLWGGAHFYPEATGFG
VVEFAKCILSDKGDTLEGKRCLITGSGKVAIHVAERLLQLGAIPLTFSDS
SGHIYEPD
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mRNA from alignment at H-elongata_contig48919:827..2941-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48919.12064.1 ID=mRNA_H-elongata_contig48919.12064.1|Name=mRNA_H-elongata_contig48919.12064.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2115bp|location=Sequence derived from alignment at H-elongata_contig48919:827..2941- (Himanthalia elongata Himel1 dioecious)
CTAACTGAGGCCCGGCGTAAAGACCCCTACTCAACGGACTTCCTGGAATC ACTGGAAGACATTCTTCCCGCTCTTGCACCAGTCTTTGACCGAGCGCCGA AGTACGCGTGGATCGCCAAGCAGTTGCTGGAGCCGGAGCGGGTTATCCAA TTCCGTGTGGTGTGTGTTCCCGTAAAACTGTAAATTGATTAAATATTACC TGGTACACCATATTAGTAGTATTTTTATGATGTACTTTAATCATGTATAC ACCATATTAGTAGTATTTTTATGATGTACTTTAATCATGTATACACCATA TTAGTATTTTTATGATGTACATGACCCGGATCCTGGAACATCTACATCTT TAAACGAAGCGAGTGAGGTCCACAACCCATGTGTCATGTCTTACATCCGA GGCATCCCTTATCTGCATCCGCCAAAGGCATGGCTGGATGACAACGGTAA TTCGCGGATGAACAGGGGCTACCGAGTCCAGTACTCTAGCGCTCTCGGGC CATACGAAGGTGGTCTACACTTACATGGCGGCATGAGTAGCGATGGCTAC AAGGTGAGATTGTTGATGCCGTTATACCTGGAACCAAGGTGCATGTGGCT GTCACACGCATGACTGCAGCTGTACGTAGCTTAGTATTAGTTCTCGTATC TATGAAGGATCTATCTATTAATAGGGTGATTTTGTGTCGCGAGTTATATT GTAGCATCCTTATCTATTATATTATATATAGTATAAATCCTTGATGTTGC TGCTGCTTTTGCTGCCAAAACAAAATCCTTTAATACAGTATTTATTATCA CCTAGCCCATCGCGTATTTTTTCTCTCAAATCACCATACGGTAATGGTAA TGTGTAATCAGGCACTTGGAATGGAGACTGTATTTTGTAATGCTCTCACT GGCTGTAACCTCGGGGCTGCTGCTGGTGGCGCTGACTTCAACCCTCACAA CAAGAGCGAAGCAGAGATCCAAAGGTAAGGTAAGGTAGGTAAGTAGGCTC AACTCTCAAGCGAAGCGGATCTTTTTCGTATACACAAGTCAGCATGCGAT GCGCAACTGGCGTACTCTCTTTTTCACATGCAGGCGTACTCTCTTTTTCG CATTGTGTTTCGTAACCATGACCCCAGGTTTTGCCAGTCGTTCATGACAG AGCTGAGCAAGTACATCGGACCTGATCTTGACATGCCATCCATGGGATAT GGCGTTGGGTTGCCTGAGGTGTGAAGCTGTTTCGCTTGTTGCGACACACC TGCCGATAGTGTCGATAGTGAGCGCGTGGTAATGCGAGACGGTGAGTCAT GCAACGATGAACTTCAGTACAGTATAGAGTAATAGAGGACTGTGTCGTAT AGTATAGTATAGTATAGTACTGTACCGCGAATGACCTCAGCAAGTCACAG GTCACATGTTTCGTGCAGCGGTCGCCACCTGAACGTTACACGGCCATATC TACAGTAATACAGTAATGAACGGTTCGATATATTCCTCACAAAAACTGAT CTTGGATAACACTTGAACTGACCAGGTGGGGTACCTATACGGGCAGTACA AACGCATCAATGACCACGTGGCTCAGAGAGGACGCGGAGTCCTCTGGGGG GGGGCGCACTTTTACCCGGAGGTGAGGAATTTCCATCCCTCTCTCTTCCA TAGTGCAGTGCAGTGCAGTGCAGTTTGTCATTATGTCATGCCCCTCAACA TCTGCTAATTTGAGTATCGAACATATGTGGATTTGCTTGATATGTACACA GAATACATAACATATACCCAAACGTTCAACAGGCAACTGGATTCGGTGTG GTCGAGTTCGCAAAGTGCATCCTGTCAGACAAAGGAGACACGCTAGAAGG AAAGCGATGCTTGATCACTGGCAGCGGCAAGGTGAGCACTAAATTCGGCA CAAAAACTCAGGATTACCGTGTATGATTCGACACAATTAAGAACGCTTGA GAACCTTTTGCGTTCAGACTCAATTACTTAGAGCTATTCTTGTATATTCC TTCCTTCCTTTTGGGTGTCTGTGAGGTGGCGATCCATGTGGCGGAGAGGC TCCTACAGCTCGGTGCCATCCCGCTGACATTTTCGGACTCAAGCGGACAC ATTTACGAACCAGAC
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Coding sequence (CDS) from alignment at H-elongata_contig48919:827..2941-

>mRNA_H-elongata_contig48919.12064.1 ID=mRNA_H-elongata_contig48919.12064.1|Name=mRNA_H-elongata_contig48919.12064.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1548bp|location=Sequence derived from alignment at H-elongata_contig48919:827..2941- (Himanthalia elongata Himel1 dioecious)
CTAACTGAGGCCCGGCGTAAAGACCCCTACTCAACGGACTTCCTGGAATC
ACTGGAAGACATTCTTCCCGCTCTTGCACCAGTCTTTGACCGAGCGCCGA
AGTACGCGTGGATCGCCAAGCAGTTGCTGGAGCCGGAGCGGGTTATCCAA
TTCCGTGTGCTAACTGAGGCCCGGCGTAAAGACCCCTACTCAACGGACTT
CCTGGAATCACTGGAAGACATTCTTCCCGCTCTTGCACCAGTCTTTGACC
GAGCGCCGAAGTACGCGTGGATCGCCAAGCAGTTGCTGGAGCCGGAGCGG
GTTATCCAATTCCGTGTGGCATGGCTGGATGACAACGGTAATTCGCGGAT
GAACAGGGGCTACCGAGTCCAGTACTCTAGCGCTCTCGGGCCATACGAAG
GTGGTCTACACTTACATGGCGGCATGAGTAGCGATGGCTACAAGGCATGG
CTGGATGACAACGGTAATTCGCGGATGAACAGGGGCTACCGAGTCCAGTA
CTCTAGCGCTCTCGGGCCATACGAAGGTGGTCTACACTTACATGGCGGCA
TGAGTAGCGATGGCTACAAGGCACTTGGAATGGAGACTGTATTTTGTAAT
GCTCTCACTGGCTGTAACCTCGGGGCTGCTGCTGGTGGCGCTGACTTCAA
CCCTCACAACAAGAGCGAAGCAGAGATCCAAAGGCACTTGGAATGGAGAC
TGTATTTTGTAATGCTCTCACTGGCTGTAACCTCGGGGCTGCTGCTGGTG
GCGCTGACTTCAACCCTCACAACAAGAGCGAAGCAGAGATCCAAAGGTTT
TGCCAGTCGTTCATGACAGAGCTGAGCAAGTACATCGGACCTGATCTTGA
CATGCCATCCATGGGATATGGCGTTGGGTTGCCTGAGGTTTTGCCAGTCG
TTCATGACAGAGCTGAGCAAGTACATCGGACCTGATCTTGACATGCCATC
CATGGGATATGGCGTTGGGTTGCCTGAGGTGGGGTACCTATACGGGCAGT
ACAAACGCATCAATGACCACGTGGCTCAGAGAGGACGCGGAGTCCTCTGG
GGGGGGGCGCACTTTTACCCGGAGGTGGGGTACCTATACGGGCAGTACAA
ACGCATCAATGACCACGTGGCTCAGAGAGGACGCGGAGTCCTCTGGGGGG
GGGCGCACTTTTACCCGGAGGCAACTGGATTCGGTGTGGTCGAGTTCGCA
AAGTGCATCCTGTCAGACAAAGGAGACACGCTAGAAGGAAAGCGATGCTT
GATCACTGGCAGCGGCAAGGCAACTGGATTCGGTGTGGTCGAGTTCGCAA
AGTGCATCCTGTCAGACAAAGGAGACACGCTAGAAGGAAAGCGATGCTTG
ATCACTGGCAGCGGCAAGGTGGCGATCCATGTGGCGGAGAGGCTCCTACA
GCTCGGTGCCATCCCGCTGACATTTTCGGACTCAAGCGGACACATTTACG
AACCAGACGTGGCGATCCATGTGGCGGAGAGGCTCCTACAGCTCGGTGCC
ATCCCGCTGACATTTTCGGACTCAAGCGGACACATTTACGAACCAGAC
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