mRNA_H-elongata_contig48495.12006.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 207 bits (528), Expect = 1.670e-58 Identity = 124/349 (35.53%), Postives = 190/349 (54.44%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQ---------------------------LEAKGFQRSQADLCVFRWILH--GVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKT-SIIPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+P ++ EA S+EWP+WK AI +EM + G + +V+ PK ++G++ VF+ K + + IE YK RLVAQGF QV GI + ++ + ASI ++L + A WE Q+DV AYL ++EEEIY++ P + K+ L + G RS+ D CVF W+ + V+++ I + VDD +A TK RE+ + F ++DL + LG + RDR+V TL+ QH YI + RF + S+ + G LS P T + E+M+ IPYRE++G+L++AA TRPDI++A L +F NPG HW AA++ +
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFR 457
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 203 bits (517), Expect = 3.520e-55 Identity = 124/349 (35.53%), Postives = 188/349 (53.87%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQ---------------------------LEAKGFQRSQADLCVFRWILH--GVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKT-SIIPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+P ++ EA S+EWP+WK AIA+EM + G + +V+ PK ++G++ VF+ K + + IE YK RLVAQGF QV GI + ++ + ASIR++L + A WE Q+DV AYL ++EEEIY+ P + K+ L + G RS+ D CVF W+ + V+++ I + VDD +A TK RE+ + F ++DL + LG + RDR+ TL+ Q YI + RF + S+ + G LS P T + E+M+ IPYRE +G+L++AA TRPDI++A L +F NPG HW AA++ +
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFR 1267
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A6A3JRZ2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JRZ2_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.740e-54 Identity = 119/332 (35.84%), Postives = 174/332 (52.41%), Query Frame = 1
Query: 28 ASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELP---EAYRDSRKQLE----------------------AKGFQRSQADLCVF-RWILHGVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKTSIIPS-VAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAA 942
AS + QW+ A+ E+ G W +V R +G R VF +K D+ R+ +YK RLVA+GF+Q GI + ++ S SIR+VL + AA + QLD D A+L +E+++ +Y+E+P E RD + QL GF+ AD CV+ + +G + V + YVDD+++A+ T D ++ L + F + +L A + LG I D GTL Q +YI + +RFG + + A G LSK SP TDAE MR PYR ++G L++ T TRPDI+F A QL +F +NPG HW AA
Sbjct: 2 ASDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARDYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCL--YVDDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKQTRYIDDVVKRFGQENAKPVDNPCAAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFMATQLSRFLENPGQQHWNAA 331
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 192 bits (487), Expect = 3.620e-53 Identity = 130/352 (36.93%), Postives = 185/352 (52.56%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELP-----------------------EAYRDSRKQLEAK----GFQRSQADLCVFRWILHG----VVVVAIVVYVDDLLVASATKRDEKQAVRELCSC-FPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKT-SIIPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
EP T+ EA+AS EWPQW+ AI E+ G W++ ++P G V+G+ VFK K D I KYK RLVAQGF Q+ G+ Y + + +SIR++ + A WE Q+DV AYL ++EEEI+++ P +A R K+L A GF RS D VF HG + +VA V VDDL +A A DE ++ F +TDL + LG I RDR T++ Q YI T+ RF + S+ ++ SL+ SP T + ++MR I YRE +G+L++AA TRPD+S+A L +F NPG HW AA++ ++
Sbjct: 29 EPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVF--FRHGPNGEIAIVA--VSVDDLAIA-ANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMR 375
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR) HSP 1 Score: 190 bits (482), Expect = 3.640e-52 Identity = 113/349 (32.38%), Postives = 190/349 (54.44%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQ---------------------------LEAKGFQRSQADLCVFRWILHGVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKTSIIPSVAG---GKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+PTT +A + QW A+ E+ VW + + P G +G + V+K K+D + IE+YK RLVA+G+ Q +GI Y+++ S + S+R+V+ ++A E Q+DV A+L ++ E+++++ PE + K+ ++ F ++Q D C++ I G V +V+YVDD+L+AS ++ R L + F + DL ASY +G I R+R++GTL Q YI+ + +RF + + S PSVA G + P+++AE+++MR IPY +VG+L++A TRPDI++ L ++ NPG HW+AA+K L+
Sbjct: 109 DPTTFKDAMNCDQSTQWLDAMKDELKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCS--PSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKKVLR 454
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY) HSP 1 Score: 194 bits (494), Expect = 4.000e-52 Identity = 121/349 (34.67%), Postives = 185/349 (53.01%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQ---------------------------LEAKGFQRSQADLCVFRWILH--GVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKT-SIIPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+P ++ EA S+EWP+W AIA+EM + G + +V+ PK ++G++ VF+ K + + IE YK RLVAQGF QV GI + ++ + ASIR++L + A WE Q+DV YL ++EEEIY+ P + K+ L + G RS+ D C+F W+ + V+++ I + VDD +A TK RE+ F ++DL + LG + RDR+ TL+ Q YI + RF + S+ + G LS P T + E+M+ IPYRE +G+L++AA TRPDI++A L +F NPG HW AA++ +
Sbjct: 744 DPASLNEAMQSTEWPKWTEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIF-WLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMKNPGRPHWEAAKRVFR 1090
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A2N9E297_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9E297_FAGSY) HSP 1 Score: 191 bits (485), Expect = 3.320e-51 Identity = 115/323 (35.60%), Postives = 176/323 (54.49%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAY---RDSRKQLEAKGFQRSQADLCVFRWILHGVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKTSIIPSVAG-GKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
EP + EA +S +W A+ E + VW++V P G+ +G + V K K D I+KYK RLVA+G+ Q KG+ YEK+ S +SI ++L M+A+L E Q+DV A+L E++EEI+++ P + RK++ + GF + D CV+ G ++ + +Y DD+L+ K K L S F + D+ AS+ LG I RDR+ L Q YI+ + ERF + I + G SLS P+T AE+E M ++PY +G+L++A TRPDI FA + +F N GP HW+A ++ L+
Sbjct: 394 EPRSYDEAMSSPACNEWMTAMKEENESMRTNQVWELVDLPPGRKSIGNKWVLKIKRKADGSIDKYKARLVAKGYTQKKGVDYEKTFSPVVRFSSIHLILAMVASLNLELHQMDVKTAFLNGELDEEIFIDQPIGFVVKGQKRKEVISNGFLMIEEDHCVYVKRSKGSFII-LSLYADDILLIGNNKEFIKTIKEWLSSTFEMKDMGEASFVLGVKILRDRSRKLLGLSQETYIRKVLERFHMQDCKPIDTPVGKSDSLSSEMCPKTQAEIESMARVPYANAIGSLMYAMLCTRPDICFAVGLVNRFQSNRGPAHWKAVKRILR 715
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A2N9HDZ1_FAGSY (RNase H type-1 domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HDZ1_FAGSY) HSP 1 Score: 192 bits (487), Expect = 3.600e-51 Identity = 123/348 (35.34%), Postives = 187/348 (53.74%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQ---------------------------LEAKGFQRSQADLCVFRWILHGVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKTSI--IPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+P++ +A SS+ +W A+ E+ VW +V P G +G + VFK K D +IE+YK RLVA+GF Q +GI Y+++ S + S R+V+ ++A +E Q+DV A+L ++ E++Y+ P ++ S K+ + + GF+ + D C++ I G ++ +V+YVDD+L+AS ++ R L F + DL AS+ LG I RDR+ G L Q YI + ERF ++ S P V G K LSKL PQ D E EM++IPY VG+L++A TRPDI+FA L +F +PG HWRAA+K L+
Sbjct: 479 DPSSYSQAIQSSQSTKWIDAMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGIDYKETFSPVSSKDSFRIVMALVAHFDFELHQMDVKTAFLNGDLTEDVYMLQPNGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYLKI-SGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCSAGDAPVVKGDK-LSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLR 824
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR) HSP 1 Score: 184 bits (466), Expect = 3.850e-51 Identity = 109/347 (31.41%), Postives = 183/347 (52.74%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQ---------------------------LEAKGFQRSQADLCVFRWILHGVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKTS-IIPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+P++ EA S + +W A+ E++ VW++V+ G +G + V+K K+D + +E++K RLVA+G+ Q +GI Y+++ S + S+R+V+ ++A E Q+DV A+L E+ E++Y+ PE ++ K+ ++ GF +Q D C + + G +V+YVDD+L+AS + ++ R L S F + DL ASY +G I RDR GTL Q YI + R+ + S ++ V G P+T+ E E+MR IPY +VG++++A TRPDI++ A L ++ NPG HW+A +K L+
Sbjct: 35 DPSSYNEAITSDQSSEWHNAMIDELESMDKNNVWELVELLNGAKPVGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYLK-MSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLR 380
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY) HSP 1 Score: 191 bits (486), Expect = 4.800e-51 Identity = 117/346 (33.82%), Postives = 181/346 (52.31%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRKIDKDERIEKYKCRLVAQGFRQVKGIHYEKSSSRTPVQASIRMVLGMIAALGWEARQLDVDMAYLEAEVEEEIYVELPEAYRDSRKQLEAK--------------------------GFQRSQADLCVFRWILHGVVVVAIVVYVDDLLVASATKRDEKQAVRELCSCFPITDLRGASYYLGCHITRDRNVGTLTFDQHQYIQTMAERFGVTKT-SIIPSVAGGKSLSKLDSPQTDAEVEEMRQIPYREIVGALVWAATMTRPDISFAAHQLEKFNDNPGPTHWRAAQKALK 957
+P T +A S + +W++A E+ A W +V P GK +G+ VFK K + D +E+YK RLVA+G+ Q G Y + + T Q ++R++L + AA E +D+ A+L ++EEEIY++ PE + ++ + GF R Q+D ++ +I V ++ + V++DD+ +AS +K+ V+EL S F + DL + LG I RDR T++ Q QYI M ER+G++ S+ + G LSK +PQT E E M ++PY VGAL++ A TRPDI FA L +FN NPGP HW A + +
Sbjct: 883 DPRTYKQAMGSPDADKWQQAANEEIVSLMANNTWDIVPLPPGKRAIGSGWVFKVKHNADGSVERYKGRLVAKGYSQRPGFDYTEVFAPTFRQPALRLILALAAAEDLELHSVDISSAFLNGDLEEEIYMQQPEGFHQGGPEMVCRLNKSLYGLKQGARQWNKKLHEVLTKMGFTRLQSDRSIYVYIREDVRII-VPVFIDDMTLASKSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAELSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNANPGPAHWIAVKHVFR 1227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48495.12006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48495.12006.1 >prot_H-elongata_contig48495.12006.1 ID=prot_H-elongata_contig48495.12006.1|Name=mRNA_H-elongata_contig48495.12006.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=315bp MGEAQASSEWPQWKRAIAREMDGKTARGVWQVVQRPKGKTVLGTRVVFKRback to top mRNA from alignment at H-elongata_contig48495:476..1507- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48495.12006.1 ID=mRNA_H-elongata_contig48495.12006.1|Name=mRNA_H-elongata_contig48495.12006.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1032bp|location=Sequence derived from alignment at H-elongata_contig48495:476..1507- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48495:476..1507- >mRNA_H-elongata_contig48495.12006.1 ID=mRNA_H-elongata_contig48495.12006.1|Name=mRNA_H-elongata_contig48495.12006.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1890bp|location=Sequence derived from alignment at H-elongata_contig48495:476..1507- (Himanthalia elongata Himel1 dioecious)back to top |