mRNA_H-elongata_contig48486.12001.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A6H5JW60_9PHAE (Ald_Xan_dh_C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW60_9PHAE) HSP 1 Score: 460 bits (1183), Expect = 3.890e-157 Identity = 229/278 (82.37%), Postives = 246/278 (88.49%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKTSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLMDRKNAFAVHSSKVIFFSPFF 834
AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVA EF I+VEKVHISETATDRVAN+SPTAAS+STDLYGMAALDACEQIT RLRPV A+LP PFATI AAYFQ V LSAQGFY VP RCGYDF M+T+NNRDRG PFNYFTQGVAASEVE+DCLTGDAK++RADI+MDIG S+NPAIDIGQIEGAF QG+GWCTMEET+WGDSEH WVRPG+LFT+GPG+YKIPSFNDVPSDMRVKLMDR NAFAVHSSK + PFF
Sbjct: 277 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVANEFNIDVEKVHISETATDRVANTSPTAASMSTDLYGMAALDACEQITERLRPVMAELPEDTPFATI--AAYFQRVQLSAQGFYTVPAARCGYDFDMETTNNRDRGLPFNYFTQGVAASEVEIDCLTGDAKVIRADILMDIGTSVNPAIDIGQIEGAFV--------QGYGWCTMEETSWGDSEHLWVRPGQLFTKGPGTYKIPSFNDVPSDMRVKLMDRANAFAVHSSKAVGEPPFF 544
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: D7G4V3_ECTSI (Xanthine dehydrogenase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4V3_ECTSI) HSP 1 Score: 452 bits (1163), Expect = 3.050e-145 Identity = 222/276 (80.43%), Postives = 244/276 (88.41%), Query Frame = 1
Query: 7 FMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKTSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLMDRKNAFAVHSSKVIFFSPFF 834
F+NQ GALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVA EF I+VEKVHISETATDRVAN++PTAAS+STDLYGMAALDACEQIT RLRPV A+LP G PFATIV+AAYFQ + LSAQGFY V RC YDF M+T+NNRDRG PFNYFTQGVAASEVE+DCLTGDAK++RADI+MDIG S+NPAIDIGQIEGAF QG+GWCTMEET+WGDSEH WV+PG+LFT+GPG+YKIPSFNDVPSDMRVKLMDR NAFAVHSSK + PFF
Sbjct: 1167 FLNQAGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVANEFNIDVEKVHISETATDRVANTTPTAASMSTDLYGMAALDACEQITERLRPVMAQLPEGTPFATIVQAAYFQRIQLSAQGFYIVHAERCNYDFDMETTNNRDRGLPFNYFTQGVAASEVEIDCLTGDAKVMRADILMDIGTSVNPAIDIGQIEGAFI--------QGYGWCTMEETSWGDSEHLWVKPGQLFTKGPGTYKIPSFNDVPSDMRVKLMDRANAFAVHSSKAVGEPPFF 1434
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A836C8N1_9STRA (Xanthine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N1_9STRA) HSP 1 Score: 399 bits (1024), Expect = 6.500e-126 Identity = 205/277 (74.01%), Postives = 225/277 (81.23%), Query Frame = 1
Query: 7 FMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKTSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLMDR-KNAFAVHSSKVIFFSPFF 834
FMNQGGALVHVY DGTVLVSHGGTEMGQGLHTKV Q A FGI E VH++ETATDRV N+SPTAAS+STDLY MAALDACEQI RL+PVA KLP GA F TIV+A +FQ VNLSAQGFY VP+ RCGYDF + +NR RG PFNY+TQGVAASEVEVD LTGDA++LRADI MD+G SINPAIDIGQIEGAF QG+GWCTMEE WGD++H WVRPG+LFT+GPG+YKIPSFNDVP DMRVKLM N FAVHSSK I PFF
Sbjct: 1050 FMNQGGALVHVYTDGTVLVSHGGTEMGQGLHTKVIQTCARAFGISDEWVHVAETATDRVPNASPTAASMSTDLYCMAALDACEQIKERLKPVAEKLP-GADFKTIVQAGFFQRVNLSAQGFYVVPSDRCGYDFNVPGDDNRARGQPFNYYTQGVAASEVEVDTLTGDARVLRADITMDVGNSINPAIDIGQIEGAFV--------QGYGWCTMEELIWGDADHKWVRPGQLFTKGPGAYKIPSFNDVPGDMRVKLMHSVNNPFAVHSSKAIGEPPFF 1317
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A7S2RHM1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHM1_9STRA) HSP 1 Score: 377 bits (967), Expect = 9.990e-125 Identity = 190/282 (67.38%), Postives = 219/282 (77.66%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKT---SNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLMDR-KNAFAVHSSKVIFFSPFF 834
A FMNQGGALVHVY DGTVLVSHGGTEMGQGLHTKVCQV A G+ + VH++E+ATD+VAN+SP+AAS+STDLYGMA L+AC +I RL PVAA L PGA F +V AAYFQ V+LSA GFY VP+ RCGYD+ +N RG PFNYFTQGVAASEVEVDCLTGD +ILR D++MD+G SINPA+DIGQIEGAF QG GW TMEE WGD H WVRPG+LFTRGPG+YKIP+FND P D+RV+L+D+ N FAVHSSK + PFF
Sbjct: 276 AKFMNQGGALVHVYTDGTVLVSHGGTEMGQGLHTKVCQVAARVLGVPLADVHVAESATDKVANASPSAASLSTDLYGMATLNACHEIKRRLDPVAAGLAPGATFQEVVTAAYFQRVDLSAHGFYIVPSHRCGYDWSAPIPPGGDNSARGQPFNYFTQGVAASEVEVDCLTGDVRILRTDLLMDVGDSINPALDIGQIEGAFV--------QGMGWMTMEELAWGDEAHSWVRPGQLFTRGPGAYKIPAFNDTPVDLRVQLLDKASNPFAVHSSKAVGEPPFF 549
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: W7TFQ7_9STRA (Xanthine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFQ7_9STRA) HSP 1 Score: 382 bits (980), Expect = 3.250e-119 Identity = 194/281 (69.04%), Postives = 222/281 (79.00%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLP-PGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMK-TSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLM-DRKNAFAVHSSKVIFFSPFF 834
A FMNQGGALVHVY DGTVLVSHGGTEMGQGLHTKVCQ+ A FG+E E+VHI+ETATDRVANS PTAAS+STDLYGMA LDAC+QI RL PV A+L A + +V+AAYF+ ++LSA GFY VP CGYD+ K +NN +RG PFNYFTQG A SEVEVDCLTGDA++LRADI+MD+GASINP+ID+GQIEGAF QGFGW T EE WGD++HPWV+PG L TRGPG+YKIP+FNDVP D RV L+ D KN AVHSSK I PFF
Sbjct: 1130 AKFMNQGGALVHVYQDGTVLVSHGGTEMGQGLHTKVCQIAARAFGLEEEQVHIAETATDRVANSQPTAASMSTDLYGMATLDACQQILRRLAPVRARLGGEKAEWTAVVQAAYFERIDLSAHGFYIVPDDMCGYDWEKKGVTNNSERGQPFNYFTQGTAVSEVEVDCLTGDARVLRADIVMDVGASINPSIDVGQIEGAFV--------QGFGWLTTEELIWGDADHPWVKPGSLLTRGPGAYKIPAFNDVPIDFRVTLLKDTKNPVAVHSSKAIGEPPFF 1402
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A7S1XKK2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKK2_9STRA) HSP 1 Score: 363 bits (932), Expect = 3.430e-118 Identity = 185/281 (65.84%), Postives = 215/281 (76.51%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGA-PFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKT-SNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLM-DRKNAFAVHSSKVIFFSPFF 834
A FMNQGGALVHVY DGTVLVSHGGTEMGQGLHTK+ V A FGI V VH++ETATD+VAN+SPTAAS+STDLYGMA LDACEQI +LRPV K+ ++ +V+ AYF+ VNLSAQGFY VP RCGYD+ + ++N RG PFNYFTQGVA SEVEVDCLTGD +++R+DI+MD+G SINPAIDIGQIEG F QG GW T EE WGD HPWVRPG+LF+RGPG YKIP+ NDVP D+RV L+ D N FAVHSSK + P+F
Sbjct: 394 AKFMNQGGALVHVYTDGTVLVSHGGTEMGQGLHTKMAAVAAQTFGIPVHMVHVAETATDKVANASPTAASMSTDLYGMAVLDACEQILEQLRPVREKMASNEFSWSALVQRAYFERVNLSAQGFYTVPGDRCGYDWNLNVGADNARRGQPFNYFTQGVACSEVEVDCLTGDFRVVRSDILMDLGKSINPAIDIGQIEGGFV--------QGLGWLTTEEAIWGDKSHPWVRPGQLFSRGPGFYKIPAANDVPRDLRVHLLSDAPNPFAVHSSKAVGEPPYF 666
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A7S3H3T6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3T6_9STRA) HSP 1 Score: 363 bits (931), Expect = 1.290e-115 Identity = 179/278 (64.39%), Postives = 215/278 (77.34%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKTSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLMDRKNAFAVHSSKVIFFSPFF 834
A FMNQGGALVHVY DG+VL++HGGTEMGQGL+TKV QV A FGI + + +E+AT+ V N+SP+AAS+STDLYGMA LDACE I RL P+ A+L + T+V+ A+F V+LSA GFYK+ T RCGYDF ++NR+RG PFNYFT GVA +EVE+DCLTGD+ ++RAD++MD+G SINPAIDIGQIEGAF QGFGW TME+ WGD EHPWVRPG+LFTRGPG+YKIPSFNDVP+D RV L D N FAVHSSK + PFF
Sbjct: 608 AKFMNQGGALVHVYTDGSVLLAHGGTEMGQGLYTKVIQVAAQSFGISEQYIITTESATNTVPNASPSAASLSTDLYGMAVLDACEIIKKRLEPIKARLGD-CDWPTLVRTAFFDRVDLSAHGFYKIHTDRCGYDFDKVCASNRERGFPFNYFTMGVAVTEVEIDCLTGDSNVVRADVLMDVGKSINPAIDIGQIEGAFV--------QGFGWSTMEDLIWGDKEHPWVRPGQLFTRGPGTYKIPSFNDVPADFRVHLSDTDNRFAVHSSKAVGEPPFF 876
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A482SVL4_9ARCH (Ald_Xan_dh_C2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVL4_9ARCH) HSP 1 Score: 338 bits (866), Expect = 9.830e-114 Identity = 175/274 (63.87%), Postives = 204/274 (74.45%), Query Frame = 1
Query: 16 QGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKTSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDS-EHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLMDRKNAFAVHSSKVIFFSPFF 834
QGGALVHVY DG+VLV+HGGTEMGQGL TKV Q+ A F I V +ETAT+ VAN+SP+AAS+STDLYGMA LDACEQI +RL+P+ ++P A + +V AAYFQ +NLSAQGFY VPT +CGYD+ N G+ FNYFTQG A +EVE+D LTGD K+LRADI+MD+G SINP IDIGQIEGAF QGFGW TMEE WG+ + PWVR G+LFTRGPG+YKIP+FNDVP D RV L D N FAVHSSK I PFF
Sbjct: 6 QGGALVHVYTDGSVLVAHGGTEMGQGLFTKVIQIAARCFQIPDTMVFTAETATNTVANASPSAASLSTDLYGMAVLDACEQILSRLQPLREQMPQ-ATWPELVSAAYFQRINLSAQGFYIVPTDKCGYDWSKSVQENSKVGTAFNYFTQGAACTEVEIDVLTGDCKMLRADIVMDVGKSINPTIDIGQIEGAFM--------QGFGWSTMEEMIWGEKKDFPWVREGQLFTRGPGAYKIPAFNDVPLDFRVHLADTDNTFAVHSSKAIGEPPFF 270
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A7S3AHC4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AHC4_9EUKA) HSP 1 Score: 334 bits (856), Expect = 5.030e-111 Identity = 171/287 (59.58%), Postives = 206/287 (71.78%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPGAPFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMK-------TSNNRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRP-GELFTRGPGSYKIPSFNDVPSDMRVKLMDRK-NAFAVHSSKVIFFSPFF 834
A FMNQGGALVH+Y DGTVLV+HGGTEMGQGLHTKV QV A FGI + VHI+ETATD+VANS PTAAS STDLYGMA LDAC QI ARL+P+ LP G + I AA+F ++LSA GF+ + RCG+D+ + T +N RG PFNYFTQGV EVE+D LTGD ++LRAD+++D+G+SINPA+DIGQIEGAF +QG GW T EE WGDS+H WV+P G L T+GPG+YK PSFND P ++ V+LM N VHSSK + PFF
Sbjct: 9 AKFMNQGGALVHLYTDGTVLVTHGGTEMGQGLHTKVAQVAARAFGISLSAVHIAETATDKVANSQPTAASASTDLYGMATLDACNQILARLKPLRENLPSGTSLSEIATAAFFARIDLSAHGFFAIDDKRCGFDWATEPGRLPDGTHDNTTRGFPFNYFTQGVGCVEVEIDVLTGDHQVLRADLLVDLGSSINPALDIGQIEGAF--------AQGMGWTTTEELIWGDSDHVWVKPSGRLLTQGPGTYKPPSFNDTPQELNVRLMSHADNKVVVHSSKAVGEPPFF 287
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Match: A0A7R9U4K0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4K0_9STRA) HSP 1 Score: 356 bits (913), Expect = 1.050e-110 Identity = 183/281 (65.12%), Postives = 209/281 (74.38%), Query Frame = 1
Query: 1 AGFMNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHISETATDRVANSSPTAASISTDLYGMAALDACEQITARLRPVAAKLPPG-APFATIVKAAYFQSVNLSAQGFYKVPTGRCGYDFGMKTSN-NRDRGSPFNYFTQGVAASEVEVDCLTGDAKILRADIIMDIGASINPAIDIGQIEGAFYIIYISFRSQGFGWCTMEETTWGDSEHPWVRPGELFTRGPGSYKIPSFNDVPSDMRVKLM-DRKNAFAVHSSKVIFFSPFF 834
A FMNQGGALVHVY DGTVLVSHGGTEMGQGLHTK+ + A FGI VH++ETA+D+V N+SPTAAS+STDLYGMA LDACEQI + LRP+ K P G + +IV+ AYF+ VNLSAQGFY VP RCGYD+ N N RG PFNYFTQGVA SEVEVDCLTGD +LR+DI+MD+G SINP IDIGQIEG F QG GW T EE WGD H WVRPG+LF+RGPG YKIP+ NDVP D+RV L+ D N FAVHSSK + P+F
Sbjct: 924 AKFMNQGGALVHVYTDGTVLVSHGGTEMGQGLHTKMAAIAAQCFGIPAAMVHVAETASDKVPNASPTAASMSTDLYGMAVLDACEQILSNLRPIIEKNPGGDTSWPSIVQKAYFERVNLSAQGFYAVPGDRCGYDWNAPVGNDNSRRGMPFNYFTQGVACSEVEVDCLTGDFSVLRSDILMDLGKSINPVIDIGQIEGGFV--------QGLGWLTTEEAIWGDKNHQWVRPGQLFSRGPGFYKIPAANDVPKDLRVHLLNDAPNPFAVHSSKAVGEPPYF 1196 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48486.12001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48486.12001.1 >prot_H-elongata_contig48486.12001.1 ID=prot_H-elongata_contig48486.12001.1|Name=mRNA_H-elongata_contig48486.12001.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=275bp MNQGGALVHVYLDGTVLVSHGGTEMGQGLHTKVCQVVATEFGIEVEKVHIback to top mRNA from alignment at H-elongata_contig48486:115..3476- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48486.12001.1 ID=mRNA_H-elongata_contig48486.12001.1|Name=mRNA_H-elongata_contig48486.12001.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3362bp|location=Sequence derived from alignment at H-elongata_contig48486:115..3476- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48486:115..3476- >mRNA_H-elongata_contig48486.12001.1 ID=mRNA_H-elongata_contig48486.12001.1|Name=mRNA_H-elongata_contig48486.12001.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1650bp|location=Sequence derived from alignment at H-elongata_contig48486:115..3476- (Himanthalia elongata Himel1 dioecious)back to top |