mRNA_H-elongata_contig48020.11938.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48020.11938.1
Unique NamemRNA_H-elongata_contig48020.11938.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: D7FTL8_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL8_ECTSI)

HSP 1 Score: 529 bits (1362), Expect = 7.220e-178
Identity = 253/287 (88.15%), Postives = 271/287 (94.43%), Query Frame = 1 
Query:    1 QASLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            QASL+KFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMA+YTVAHLLQGEDN+DGS  GP GV+ASAM D EWDYVFL+GAYP+ S VPE KLAEMR +FEYWYPMDLRCSAKDL+PNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDA KMSKSKGNFLMM+DCVKRFGADATRFALADAGDSLEDANFAVDSAN+AIL LTGEEEWM L+LEEA QGKLR+TP+EE +FM+RAFRNEMDAL+ KTDDAY RMMWREGLH+GFFA+QLLRDFYR
Sbjct:  601 QASLTKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAYYTVAHLLQGEDNLDGSSPGPSGVEASAMGDREWDYVFLQGAYPEGSGVPEAKLAEMRTEFEYWYPMDLRCSAKDLVPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAMKMSKSKGNFLMMDDCVKRFGADATRFALADAGDSLEDANFAVDSANKAILALTGEEEWMSLVLEEAAQGKLRETPEEEYVFMDRAFRNEMDALINKTDDAYGRMMWREGLHSGFFAMQLLRDFYR 887
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A835YRC2_9STRA (Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC2_9STRA)

HSP 1 Score: 403 bits (1035), Expect = 9.660e-130
Identity = 199/291 (68.38%), Postives = 227/291 (78.01%), Query Frame = 1 
Query:    1 QASLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDG-SKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVP---EEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            Q++L KFNFTLGWLKEWACTRLFGLGTRLPWDE+WVIESLSDSTIYMA+YTVAHLL G DN+DG +K  P  +      D  WDY+FL    P   +     +  L EMR +FEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWP+GY+TNGH+ VDA+KMSKSKGNFLM+ +C++RF ADATRFA A+AGDSL DANF V +AN AI+TLT EEEW    LE  K  +LR  P E   FM+RAF NEM+ L+ KT+D Y RMMWREGL  GFF +QLLRD YR
Sbjct:  554 QSALDKFNFTLGWLKEWACTRLFGLGTRLPWDETWVIESLSDSTIYMAYYTVAHLLHGHDNLDGITKPSPCNMAPEQFTDAVWDYIFLSRPMPSACSTDANVKATLEEMRGEFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPKGYWTNGHILVDAEKMSKSKGNFLMLNECIERFSADATRFACANAGDSLLDANFEVATANNAIITLTKEEEWFKATLEALKTDQLRTGPLE--FFMDRAFDNEMNRLIAKTEDNYTRMMWREGLQGGFFEMQLLRDSYR 842
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A7S3XPZ3_HETAK (Leucyl-tRNA synthetase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPZ3_HETAK)

HSP 1 Score: 386 bits (992), Expect = 4.350e-127
Identity = 185/287 (64.46%), Postives = 223/287 (77.70%), Query Frame = 1 
Query:    1 QASLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMRQ-FEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            Q +L KFNFTLGWLKEWAC+R FGLGTRLPWDE WVIESLSDSTIYMA+YTVAHLL G DN+DGSK  P GV    + D  WDY++L    P +S +PE+ L  +RQ FEYWYPMDLR SAKDLIPNHLTMALYNHA +WKDRP+LWP+GY+ NGHV VDA+KMSKSKGNF+M+ + V+ F AD TRFA ADAGD+LEDANFA D+AN A+L L+ EE+W   ML  A  G+L +  +  DLF++ AF NE++ LV  TD+A+  M +R+GL  G+F LQ+ RDFYR
Sbjct:  177 QPNLDKFNFTLGWLKEWACSREFGLGTRLPWDEKWVIESLSDSTIYMAYYTVAHLLHGADNLDGSKASPSGVRPEQLTDAVWDYIYLGAPMPTDSGIPEDTLKALRQEFEYWYPMDLRVSAKDLIPNHLTMALYNHAEVWKDRPDLWPKGYYCNGHVLVDAEKMSKSKGNFIMLNEAVETFSADGTRFACADAGDTLEDANFARDTANAAVLALSTEEQWCRDMLAAAAAGELFEGAR--DLFVDEAFLNEINRLVAATDEAFAGMRFRDGLQTGWFQLQIARDFYR 461
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A7S1Z2B6_TRICV (Leucine--tRNA ligase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2B6_TRICV)

HSP 1 Score: 351 bits (901), Expect = 1.710e-110
Identity = 169/286 (59.09%), Postives = 217/286 (75.87%), Query Frame = 1 
Query:    7 SLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDL-FMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +LSK+ + +GWLKEWACTR FGLGT+LPWDE WVIESLSDSTIYMA+YT+AH+LQGE N++G K  P  +   ++ D  +DY++  G  P ++ + +E L +MR +F YWYPMDLR SAKDLIPNHLTMALYNHA+IW D P+LWP+GY+TNGHV VDA+KMSKSKGNFLMM D V ++ ADATRFA ADAGDSL+DANF+ ++A+ AI++L  EE W+   L  A +G LR    E DL FM++   NE D L++ T+D Y RM +REGL  G+F + + R+ YR
Sbjct:  503 ALSKYEYVVGWLKEWACTRQFGLGTQLPWDEQWVIESLSDSTIYMAYYTIAHVLQGEGNLEGDKPSPGAISPESLTDEVFDYIYSNGPPPADTPISKENLDKMRNEFRYWYPMDLRVSAKDLIPNHLTMALYNHAAIWDDEPDLWPQGYYTNGHVLVDAEKMSKSKGNFLMMNDTVNKYSADATRFACADAGDSLDDANFSRETADSAIVSLVNEETWITETL--ATEG-LRTGTAEADLNFMDKVLNNETDRLISMTEDCYSRMQFREGLQRGWFEMMIARNEYR 785
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A7S1D882_CYCTE (Leucine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D882_CYCTE)

HSP 1 Score: 341 bits (874), Expect = 3.370e-110
Identity = 165/289 (57.09%), Postives = 217/289 (75.09%), Query Frame = 1 
Query:    7 SLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDG-SKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLML---EEAKQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +LSK+ +T GWLKEWACTR FGLGT LPWD  WVIESLSDSTIYMA+YT++HLLQGEDN++G + + P  +D   +    +D+++ +   P +S +P+E LA+MR +F YWYPMDLR SAKDLIPNHLTMAL+NHA++W+D P +WPRGY+TNGHV VDA+KMSKSKGNFL+M+D +++F ADATRFA ADAGDSL+DANF+ ++A+ AI++L+ EE W+G  L   E  K G L         FM++   NE + L+  T DA+ RM +REGL  G+F + L R+ YR
Sbjct:  132 ALSKYEYTTGWLKEWACTRQFGLGTFLPWDTQWVIESLSDSTIYMAYYTISHLLQGEDNLNGETSKAPGKIDPKDLTKEVFDFIYQKAPLPADSPIPKETLAKMRAEFRYWYPMDLRVSAKDLIPNHLTMALFNHAAVWEDDPGMWPRGYYTNGHVLVDAEKMSKSKGNFLIMDDTIEQFTADATRFACADAGDSLDDANFSRETADMAIVSLSNEEAWIGETLATPELRKSGDLN--------FMDKVLLNETNRLIEVTKDAFSRMQFREGLQRGWFEMMLARNDYR 412
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A7R9W812_9STRA (Leucine--tRNA ligase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W812_9STRA)

HSP 1 Score: 340 bits (871), Expect = 3.470e-107
Identity = 165/286 (57.69%), Postives = 211/286 (73.78%), Query Frame = 1 
Query:    7 SLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSK-RGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +L K+ +T+GWLKEWACTR FGLGT LPWD  WVIESLSDSTIYMA+YT+AH+LQG DN+DG K + P GVD + + D  +DY++  G  P  + +P E L +MR +F YWYPMDLR SAKDLIPNHLTMALYNHA+IW D P+LWPRGY+TNGHV VDA+KMSKSKGNFLMM++ VK++ ADATRFA ADAGDSL+DANF+ ++A+ AI++L  EE W+   L  +      D+      FM+    NE + L+  T++ +  M +REGL  G+F + L R+ YR
Sbjct:  373 ALGKYEYTVGWLKEWACTRQFGLGTFLPWDTQWVIESLSDSTIYMAYYTIAHVLQGIDNLDGKKEKSPGGVDPAELTDEVFDYIYCDGPSPAGTNIPREALDKMRSEFRYWYPMDLRVSAKDLIPNHLTMALYNHAAIWDDEPDLWPRGYYTNGHVLVDAEKMSKSKGNFLMMDETVKKYSADATRFACADAGDSLDDANFSRETADTAIVSLVNEETWIKETLASSDLRSSSDSTN----FMDDVLTNETNRLIKATEECFAAMQFREGLQRGWFEMLLARNEYR 654
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A7S2W6P9_9STRA (Leucine--tRNA ligase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W6P9_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.050e-106
Identity = 163/289 (56.40%), Postives = 213/289 (73.70%), Query Frame = 1 
Query:    7 SLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSK-RGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDL---FMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +L+K+++++GWLKEWACTR FGLGT+LPWD+ WVIESLSDSTIYMA+YT++H+LQG +N++G K + P  VD   + D  +DY++   A    + +P+E L + R +F YWYP+DLR SAKDLIPNHLTMALYNHA+IW + P+LWPRGY+TNGHV VDA+KMSKSKGNFLMM+  V++F ADATRFA ADAGDSL+DANFA +SA+ AI++L  EE W+        +  L  T   ED    FM+R   NE + L+  T D+Y  M +REGL  G+F + L R+ YR
Sbjct:  118 ALAKYDYSIGWLKEWACTRQFGLGTQLPWDKKWVIESLSDSTIYMAYYTISHILQGYNNINGDKEKSPFNVDPEHLTDSVFDYIYYNDAPLPTTEIPKEVLDQCRNEFRYWYPLDLRVSAKDLIPNHLTMALYNHAAIWDNEPDLWPRGYYTNGHVLVDAEKMSKSKGNFLMMDQTVEQFSADATRFACADAGDSLDDANFARESADSAIMSLINEETWI--------KETLTGTDLREDTNYNFMDRVLTNETNRLIQATHDSYTAMQFREGLQHGWFEMLLARNEYR 398
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: K0RF55_THAOC (Leucine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RF55_THAOC)

HSP 1 Score: 325 bits (833), Expect = 4.340e-106
Identity = 160/290 (55.17%), Postives = 209/290 (72.07%), Query Frame = 1 
Query:    1 QASLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSK-RGPLGVDASAMRDPEWDYVFLRG-AYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDL-FMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +ASL K+  TL WLKEWACTR FGLGT LPWD  WVIESLSDSTIYMA+YT+++ LQG DN++G + + P  +  + + D  ++Y+F +G A P+ SA+P E L +MR +F YWYPMDLR SAKDLIPNHLTMALYNHA++W D PELWPRGY+TNGH+ +DA+KMSKS GNFL M + +  F ADATRFA ADAGD+L+DANF   +AN AI++L+ E  W+  +L +A     R     +DL FM++ F NE + LV  T+  +  M +REGL  G+F   + R+ Y+
Sbjct:  137 EASLEKYEATLDWLKEWACTRQFGLGTFLPWDTQWVIESLSDSTIYMAYYTISNYLQGVDNLNGDESKSPANIKVADLTDDVFNYIFRKGFALPEASAIPAETLEKMRSEFRYWYPMDLRVSAKDLIPNHLTMALYNHAAVWDDEPELWPRGYYTNGHIMLDAEKMSKSTGNFLTMLETINEFSADATRFACADAGDTLDDANFERSTANSAIVSLSNEAAWIKEVLVDADPSSYRSG---DDLNFMDKVFENETNRLVKATEKCFEEMQFREGLQRGWFETMIARNQYK 423
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A662XN57_9STRA (Leucine--tRNA ligase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XN57_9STRA)

HSP 1 Score: 325 bits (833), Expect = 7.060e-105
Identity = 159/288 (55.21%), Postives = 202/288 (70.14%), Query Frame = 1 
Query:    7 SLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGSKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEA---KQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +L ++  TLGWLKEWA  R  GLGTRLPWD  +V+ESLSDSTIYMA+YT+AH LQ   N+DGS+ GP G+    M    +DY+FL+ + P ES +P   L ++R +FEYWYP+D+R S KDLI NHLTM LY+HA IW+D P  WPRG+FTNGHVQVD +KMSKS GNFL ++DC   FGADATRFA ADAGD ++DAN+A+D+   AIL LT EEEW+  ++E+    + G+L         F ++ F N+M  L+  T   Y R+ WREGLH GFF  Q+ RD YR
Sbjct:   17 ALGEYKSTLGWLKEWAPCRQSGLGTRLPWDPEFVVESLSDSTIYMAYYTIAHHLQA--NLDGSQLGPHGIKPEQMTKEVFDYIFLKASPPTESTIPLNVLKQIRDEFEYWYPVDVRASGKDLIRNHLTMCLYHHAEIWRDDPSKWPRGFFTNGHVQVDGKKMSKSMGNFLTLKDCAAEFGADATRFACADAGDGMDDANYALDTCRMAILRLTTEEEWIKKVVEDKTALRTGELN--------FNDKVFMNQMSNLINVTASFYDRLQWREGLHTGFFEYQIARDSYR 294
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BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Match: A0A7S0CF39_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CF39_9STRA)

HSP 1 Score: 325 bits (834), Expect = 2.900e-104
Identity = 158/288 (54.86%), Postives = 213/288 (73.96%), Query Frame = 1 
Query:    1 QASLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFYTVAHLLQGEDNMDGS-KRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEEKLAEMR-QFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGYFTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDANFAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDLFMERAFRNEMDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR 858
            +++L+K+ + +GWL+EWACTR FGLGT+LPWD  WVIESLSDSTIYM++YT+AH+LQG +N++G   + P G+D + + +  +DY++L+ A    +++  + L + R +F YWYPMDLR SAKDLIPNHLTMALYNHA+IW D PELWP+GY+TNGHV VDAQKMSKS GNFL+M++ V+ + ADATRFA ADAGDSL+DANF+ ++A+ AI++L  EE+W   ML      KLR     E  FM+R F NEMD  +  T  +Y  M +R+GL  G+  + L R+ YR
Sbjct:  309 ESALTKYEYVIGWLQEWACTRQFGLGTQLPWDTKWVIESLSDSTIYMSYYTIAHILQGRNNLEGDVTKSPHGIDPNLLTNDVFDYIYLKNAPLPTTSISTDLLKKCRGEFRYWYPMDLRVSAKDLIPNHLTMALYNHAAIWDDEPELWPKGYYTNGHVLVDAQKMSKSAGNFLLMDETVELYSADATRFACADAGDSLDDANFSRETADSAIVSLVNEEDWAKEML--VAHPKLRTG---EYSFMDRVFDNEMDRCIRATAHSYSTMQFRDGLQHGWHEMLLARNEYR 591
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48020.11938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL8_ECTSI7.220e-17888.15Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YRC2_9STRA9.660e-13068.38Leucine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3XPZ3_HETAK4.350e-12764.46Leucyl-tRNA synthetase (Fragment) n=1 Tax=Heterosi... [more]
A0A7S1Z2B6_TRICV1.710e-11059.09Leucine--tRNA ligase n=2 Tax=Trieres chinensis Tax... [more]
A0A7S1D882_CYCTE3.370e-11057.09Leucine--tRNA ligase n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9W812_9STRA3.470e-10757.69Leucine--tRNA ligase n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2W6P9_9STRA1.050e-10656.40Leucine--tRNA ligase n=1 Tax=Eucampia antarctica T... [more]
K0RF55_THAOC4.340e-10655.17Leucine--tRNA ligase n=1 Tax=Thalassiosira oceanic... [more]
A0A662XN57_9STRA7.060e-10555.21Leucine--tRNA ligase n=1 Tax=Nothophytophthora sp.... [more]
A0A7S0CF39_9STRA2.900e-10454.86Leucine--tRNA ligase (Fragment) n=1 Tax=Proboscia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48020contigH-elongata_contig48020:153..3369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score531.9
Seed ortholog evalue1.8e-148
Seed eggNOG ortholog2880.D7FTL8
Preferred nameLARS
KEGG rclassRC00055,RC00523
KEGG koko:K01869
KEGG ReactionR03657
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000323,GO:0001101,GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0004823,GO:0004832,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005773,GO:0005783,GO:0005829,GO:0005911,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006429,GO:0006438,GO:0006518,GO:0006520,GO:0006605,GO:0006622,GO:0006623,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0007034,GO:0007041,GO:0007154,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008361,GO:0009058,GO:0009059,GO:0009267,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009719,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010467,GO:0010506,GO:0010507,GO:0010646,GO:0010647,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016070,GO:0016604,GO:0016874,GO:0016875,GO:0017101,GO:0019222,GO:0019538,GO:0019752,GO:0023051,GO:0023056,GO:0030054,GO:0030234,GO:0030695,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032535,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034198,GO:0034613,GO:0034641,GO:0034645,GO:0034660,GO:0042221,GO:0042594,GO:0042886,GO:0043038,GO:0043039,GO:0043043,GO:0043085,GO:0043087,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043547,GO:0043603,GO:0043604,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051716,GO:0055044,GO:0060589,GO:0061462,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090066,GO:0090304,GO:0098772,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533,GO:1903432,GO:1904263,GO:1990253,GO:1990928
EggNOG free text desc.leucyl-tRNA aminoacylation
EggNOG OGsCOG0495@1,KOG0437@2759
EC6.1.1.4
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Exons7
Model size858
Cds size858
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930791.8100975-CDS-H-elongata_contig48020:152..2921622930791.8100975-CDS-H-elongata_contig48020:152..292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 153..292 +
1691679572.1532087-CDS-H-elongata_contig48020:152..2921691679572.1532087-CDS-H-elongata_contig48020:152..292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 153..292 +
1622930791.8239386-CDS-H-elongata_contig48020:779..9601622930791.8239386-CDS-H-elongata_contig48020:779..960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 780..960 +
1691679572.1689842-CDS-H-elongata_contig48020:779..9601691679572.1689842-CDS-H-elongata_contig48020:779..960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 780..960 +
1622930791.8423295-CDS-H-elongata_contig48020:1094..12101622930791.8423295-CDS-H-elongata_contig48020:1094..1210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 1095..1210 +
1691679572.1816337-CDS-H-elongata_contig48020:1094..12101691679572.1816337-CDS-H-elongata_contig48020:1094..1210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 1095..1210 +
1622930791.8595738-CDS-H-elongata_contig48020:1482..16021622930791.8595738-CDS-H-elongata_contig48020:1482..1602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 1483..1602 +
1691679572.1911757-CDS-H-elongata_contig48020:1482..16021691679572.1911757-CDS-H-elongata_contig48020:1482..1602Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 1483..1602 +
1622930791.8759866-CDS-H-elongata_contig48020:2184..22781622930791.8759866-CDS-H-elongata_contig48020:2184..2278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 2185..2278 +
1691679572.199782-CDS-H-elongata_contig48020:2184..22781691679572.199782-CDS-H-elongata_contig48020:2184..2278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 2185..2278 +
1622930791.891573-CDS-H-elongata_contig48020:2530..25911622930791.891573-CDS-H-elongata_contig48020:2530..2591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 2531..2591 +
1691679572.2103713-CDS-H-elongata_contig48020:2530..25911691679572.2103713-CDS-H-elongata_contig48020:2530..2591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 2531..2591 +
1622930791.9029021-CDS-H-elongata_contig48020:3223..33691622930791.9029021-CDS-H-elongata_contig48020:3223..3369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 3224..3369 +
1691679572.2190847-CDS-H-elongata_contig48020:3223..33691691679572.2190847-CDS-H-elongata_contig48020:3223..3369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48020 3224..3369 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48020.11938.1prot_H-elongata_contig48020.11938.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48020 153..3369 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48020.11938.1

>prot_H-elongata_contig48020.11938.1 ID=prot_H-elongata_contig48020.11938.1|Name=mRNA_H-elongata_contig48020.11938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
QASLSKFNFTLGWLKEWACTRLFGLGTRLPWDESWVIESLSDSTIYMAFY
TVAHLLQGEDNMDGSKRGPLGVDASAMRDPEWDYVFLRGAYPKESAVPEE
KLAEMRQFEYWYPMDLRCSAKDLIPNHLTMALYNHASIWKDRPELWPRGY
FTNGHVQVDAQKMSKSKGNFLMMEDCVKRFGADATRFALADAGDSLEDAN
FAVDSANQAILTLTGEEEWMGLMLEEAKQGKLRDTPQEEDLFMERAFRNE
MDALVTKTDDAYHRMMWREGLHAGFFALQLLRDFYR
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mRNA from alignment at H-elongata_contig48020:153..3369+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48020.11938.1 ID=mRNA_H-elongata_contig48020.11938.1|Name=mRNA_H-elongata_contig48020.11938.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3217bp|location=Sequence derived from alignment at H-elongata_contig48020:153..3369+ (Himanthalia elongata Himel1 dioecious)
CAGGCGTCCCTCTCCAAGTTTAATTTCACCCTGGGGTGGCTCAAGGAGTG
GGCCTGCACGAGGCTTTTCGGGCTTGGTACTCGCCTGCCTTGGGACGAGT
CCTGGGTGATCGAGAGCCTGAGCGACTCCACCATCTACATGTGAGATAAT
CTACGTTGGATAAGTTCGCTCCCCCACCCCGCCCCCGCCCCCCTGTTCAA
AAAGTCATTTTTTGATTTTTTTATTGCTCAGTAGTATTGTTTGTTAATCG
TTGTAAAGACTACGGTACTATATTTTGACTATTGGCAGCTTTGTCCTTGT
TAGCATCCGTGACCAATGAGGGAAGTGAATGCATACAAAGCTGATCCCCT
CCCCACACCGATATTCAAGGAGGCGTTTTGTGTTATTACGTTACTCGATT
GTTTTGTGTGGGTAATCACTCTCAAAGCTCCTATATTTGATAAGTAAACA
CCTCGTGAAGAGCGAATACATTTTGGTGTTTAGTTACAATACCGTGTTTT
GCATCATTTTTTTTTCAGACCGCTCAGCATTACATGAAGCTCCAATTTTT
GTATATCCTGAGAATGCCGTCTTATTTTTATTTTTTAAATATGCTCGGGC
AATGACGAAAATTGAATCATGGTGCAGGGCGTTCTACACAGTGGCGCATC
TTCTTCAGGGAGAGGACAACATGGACGGGTCTAAGAGGGGTCCCCTCGGC
GTTGACGCCTCGGCAATGAGAGACCCCGAGTGGGACTACGTCTTCCTCCG
CGGCGCTTACCCCAAGGAGTCTGCCGTACCAGAAGAGAAACTCGCGGAGA
TGAGGCAAGTGAACTTGGATTGAAATCTCTACCTTGCTGTACTTGTCGGC
CGTCGAACGTTTGACGCTTTTGCCTTGCTTCTCTTGGTCTTGCCCGTTAT
ATCTTATGTGTCTCCTCCTGTTCTTTTGGAGTCAGGACGGAGTTCGAGTA
CTGGTATCCCATGGACCTGAGGTGCTCGGCGAAGGACCTCATCCCGAACC
ACCTCACCATGGCACTGTACAACCACGCGAGCATCTGGAAGGACCGCCCG
GAGCTGTGGTGGGTGCGGGTCGCTAGTTGTGTGTGTTTTGGACGCAGTGC
TGTTTTTGTTGGGAAATCTTCGTCGAAACCAAACCATCTTTTGGCATAAC
CGCGCAATCCGGCCCTGTCGTCCTAGGGGGGGGGAGGGGGGAGGTTCCCC
CTTTTGTTTTTTTTTAGCAAGCGGTAGATACATTACCAATGACCTTACGT
TTATCGACGACCGGCCTTGCTTCAATGTACTGAAGTATACCTTAACGTGG
GATATGAAATGGGATGGCGGTGAAACGCAGGCCGCGTGGGTATTTCACGA
ACGGCCACGTCCAAGTGGACGCGCAAAAGATGTCCAAGAGCAAGGGAAAC
TTTCTCATGATGGAAGACTGCGTCAAGCGTTTCGGCGCCGACGCCACCAG
GTGTGTGTGTACGTGTGTGTGTTGGGGAGGGGGTAAGGAATGAAGGGGTT
TCCACCGTCCGAGTACCGTTTTTTCGAAAATTCACCCTCGCGTCCGTGCG
AAGAAAAGGATGGTGATTATTGTCACTCTTTGCGATGTCTTGCTATCGCT
TCGATTGATTTGAAACATACGAAGTATGGCACCCTCGAAAAGACCAGGGA
AGGGACCACTAAAGGGAAGGGACCACTAAAAAGACGGAACGCATACGCGC
ACGTGTAAGGATACCCGCCACGTGTCTCTTTAAAATGTTTAGCGCCAGCC
CACGCCCTCACTTTCCCCCGGATATTAAAATAAAAAGCTAACCGCCGCGA
CAAGACATGGCCGGATGCAACACGATATTGCAATGAGCATTGCCTGTGGA
GCGGTCTAGTGTAGCGGGGCTTCATATGGGCGTATGATGCATGATGTATG
ATGTATGACGCACGACACGTGACGTTGATAGGCCGCGATAAATAATATCG
TAGGATATTTGGGGGGGCAGGAGCAGTAAACCACGGAAGGGAGAGTCGAC
CCCGTTCCCTCGGCGTCGGTTGTCTGGGTCAGGTTCGCCCTGGCGGACGC
AGGAGACTCTCTGGAGGACGCCAATTTTGCCGTGGACTCTGCCAACCAGG
CGATCCTGACGCTCACGGGGGAGGAGGTAGGGGAGTGGCACGCGGCGTTG
TGCGAAGCTCGTGATAGTCTTTCAAGTGTGTTATCTGAGTAAGCGTTGTA
TCGATAATGGTTCCTTTTTTTGTCTCCTTTTTATAACTCTTTTGTGTGTT
TTCATGTATTAGTATTAGTAAGTATAGGGTTTGAAGCGTAACGCCTCTAT
CTCAACGTATGGCATGAATACGTTGTTTTGTGTAATGAATACGTGCTTCC
GTGCGCGCGAAACGTGTCATTTCGGCAGGAGTGGATGGGTTTAATGCTGG
AGGAGGCGAAGCAAGGAAAGCTTCGGGATACCCCGCAAGGTGGGTGAATG
CATTCGAAGAACAAAGAACGATTAACCCAGGAGGCGTGATTAAGGAGGGG
GCGGAATAGGTCACAGCCAAAGCTCGAAACATGCGCAATGCAAGTATATC
AAAGGCACGGTTTGCATGAGGCAAGAGCAAATTTGAGCCTTAACCGAGAG
CTGATCCACATGATATGACGTGACACGTAGTTCATCTAGGGCCCCGTTAA
CGTGTTTCTTGTTTTTTTCCTCATCTATTTGTAGACTACTGTATATTTTT
AGGTATTATATTTATTTTCCCATCTTTACCAGTAACTCTTTTTTTGTTCT
TTTTTTCTTCGATTTCTCTTGAATTTACTGTTGTTTTTCGTCGTTTATAT
AGATAAAAGACATTTTAATATCTACCTGGTATATATTAATGCAACTTTGG
TTTTTCGAATTTTTCCTACTGGAGTTCCTTTTTTTCTTAATTTCTCGTTT
TGTTTTTGTTTTTGTTTTTCTGCGTTTTGGTATATATTTTGATCGATAGA
CTAGATCCCATAGAGATTAATTTTATTTTGAAAATAACTTATTAATAATC
AACTTTCTCTTTTTGCTCGGTGTTTCGTTATTTTTTCCCTCTTTCTCTCT
TTAAATATATCCTCCGTACAGAGGAAGACCTGTTCATGGAACGCGCCTTC
CGGAACGAAATGGACGCCCTCGTGACGAAGACAGATGACGCCTACCATCG
GATGATGTGGAGAGAGGGTCTTCATGCCGGATTCTTCGCCCTGCAACTCC
TCCGGGACTTTTACCGG
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Coding sequence (CDS) from alignment at H-elongata_contig48020:153..3369+

>mRNA_H-elongata_contig48020.11938.1 ID=mRNA_H-elongata_contig48020.11938.1|Name=mRNA_H-elongata_contig48020.11938.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig48020:153..3369+ (Himanthalia elongata Himel1 dioecious)
CAGGCGTCCCTCTCCAAGTTTAATTTCACCCTGGGGTGGCTCAAGGAGTG
GGCCTGCACGAGGCTTTTCGGGCTTGGTACTCGCCTGCCTTGGGACGAGT
CCTGGGTGATCGAGAGCCTGAGCGACTCCACCATCTACATCAGGCGTCCC
TCTCCAAGTTTAATTTCACCCTGGGGTGGCTCAAGGAGTGGGCCTGCACG
AGGCTTTTCGGGCTTGGTACTCGCCTGCCTTGGGACGAGTCCTGGGTGAT
CGAGAGCCTGAGCGACTCCACCATCTACATGGCGTTCTACACAGTGGCGC
ATCTTCTTCAGGGAGAGGACAACATGGACGGGTCTAAGAGGGGTCCCCTC
GGCGTTGACGCCTCGGCAATGAGAGACCCCGAGTGGGACTACGTCTTCCT
CCGCGGCGCTTACCCCAAGGAGTCTGCCGTACCAGAAGAGAAACTCGCGG
AGATGAGGCAAGGCGTTCTACACAGTGGCGCATCTTCTTCAGGGAGAGGA
CAACATGGACGGGTCTAAGAGGGGTCCCCTCGGCGTTGACGCCTCGGCAA
TGAGAGACCCCGAGTGGGACTACGTCTTCCTCCGCGGCGCTTACCCCAAG
GAGTCTGCCGTACCAGAAGAGAAACTCGCGGAGATGAGGCAATTCGAGTA
CTGGTATCCCATGGACCTGAGGTGCTCGGCGAAGGACCTCATCCCGAACC
ACCTCACCATGGCACTGTACAACCACGCGAGCATCTGGAAGGACCGCCCG
GAGCTGTGTTCGAGTACTGGTATCCCATGGACCTGAGGTGCTCGGCGAAG
GACCTCATCCCGAACCACCTCACCATGGCACTGTACAACCACGCGAGCAT
CTGGAAGGACCGCCCGGAGCTGTGGCCGCGTGGGTATTTCACGAACGGCC
ACGTCCAAGTGGACGCGCAAAAGATGTCCAAGAGCAAGGGAAACTTTCTC
ATGATGGAAGACTGCGTCAAGCGTTTCGGCGCCGACGCCACCAGGCCGCG
TGGGTATTTCACGAACGGCCACGTCCAAGTGGACGCGCAAAAGATGTCCA
AGAGCAAGGGAAACTTTCTCATGATGGAAGACTGCGTCAAGCGTTTCGGC
GCCGACGCCACCAGGTTCGCCCTGGCGGACGCAGGAGACTCTCTGGAGGA
CGCCAATTTTGCCGTGGACTCTGCCAACCAGGCGATCCTGACGCTCACGG
GGGAGGAGGTTCGCCCTGGCGGACGCAGGAGACTCTCTGGAGGACGCCAA
TTTTGCCGTGGACTCTGCCAACCAGGCGATCCTGACGCTCACGGGGGAGG
AGGAGTGGATGGGTTTAATGCTGGAGGAGGCGAAGCAAGGAAAGCTTCGG
GATACCCCGCAAGGAGTGGATGGGTTTAATGCTGGAGGAGGCGAAGCAAG
GAAAGCTTCGGGATACCCCGCAAGAGGAAGACCTGTTCATGGAACGCGCC
TTCCGGAACGAAATGGACGCCCTCGTGACGAAGACAGATGACGCCTACCA
TCGGATGATGTGGAGAGAGGGTCTTCATGCCGGATTCTTCGCCCTGCAAC
TCCTCCGGGACTTTTACCGGAGGAAGACCTGTTCATGGAACGCGCCTTCC
GGAACGAAATGGACGCCCTCGTGACGAAGACAGATGACGCCTACCATCGG
ATGATGTGGAGAGAGGGTCTTCATGCCGGATTCTTCGCCCTGCAACTCCT
CCGGGACTTTTACCGG
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