mRNA_H-elongata_contig47765.11910.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47765.11910.1
Unique NamemRNA_H-elongata_contig47765.11910.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: D8LTW5_ECTSI (Bardet-Biedl syndrome 9, parathyroid hormone-responsive B1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW5_ECTSI)

HSP 1 Score: 571 bits (1471), Expect = 1.410e-193
Identity = 275/344 (79.94%), Postives = 308/344 (89.53%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGVSRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAASQGDREERNSEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+AREWWSTK+G+ EEFD GS+A+GNVDN+  GG+KVVTGS QG+LRVH P +  FRIEDLLLEQD+GTPI+Q+S+GRFIPSAP I AIAVLHPRKLGVY++EAVGG GAKASY+ L+KAYEH LG++GGGHFTS NMTHGGFGGVSRDLLCVQSMDGRLQ    DAHAFTRRL GILVPGP+CYV+KIDA VVGN+EMGVDCYKYQALAASQ DRE+  SEGIS ARGLQAYWSCQLGE VL++FVAKFSR+LGPGCVDIVVVGER+LFTLREQGTVRLQKVL YQPACACKY +VA PGE G  LTG TV G+DEGFA +VEEENL+IA D+DQLMV+K
Sbjct:    1 MSLFRAREWWSTKLGEGEEFDKGSMALGNVDNDSMGGVKVVTGSFQGVLRVHHPVQADFRIEDLLLEQDLGTPIIQVSVGRFIPSAPQINAIAVLHPRKLGVYSVEAVGGTGAKASYFDLVKAYEHVLGIEGGGHFTSCNMTHGGFGGVSRDLLCVQSMDGRLQ----DAHAFTRRLNGILVPGPLCYVAKIDAFVVGNSEMGVDCYKYQALAASQEDREKGRSEGISAARGLQAYWSCQLGEAVLDVFVAKFSRSLGPGCVDIVVVGERTLFTLREQGTVRLQKVLGYQPACACKYVVVAGPGEEGAGLTGTTVRGIDEGFATVVEEENLVIAADTDQLMVYK 340          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A6H5K7J4_9PHAE (Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J4_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 1.660e-170
Identity = 274/440 (62.27%), Postives = 306/440 (69.55%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGVSRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQ------------------------------------------------------------------------------------------------ALAASQGDREERNSEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+AREWWSTK+G+ EEFD GS+A+GNVDN+  GG+KVVTGS QG+LRVH P +  FRIEDLLLEQD+GTPILQ+S+GRFIPSAP I AIAVLHPRKLGVYT+EAVGG GAKASY+ L+KAYEH LG++GGGHFTS NMTHGGFGG+SRDLLCVQSMDGRLQ    DAHAFTRRL GILVPGP+CYV+KIDA VVGN+EMGVDCYKYQ                                                                                                ALAASQ DRE+  SEGIS ARGLQAYWSCQLGE VL++FVAKFSRALGPGC+DIVVVGER+LFTLREQGTVRLQKVL YQPACACKY +VA PGE G  LTG TV  +DEGFA +VEEENL+I  D+DQLMV+K
Sbjct:    1 MSLFRAREWWSTKLGEGEEFDKGSMALGNVDNDSMGGVKVVTGSFQGVLRVHHPVKADFRIEDLLLEQDLGTPILQVSVGRFIPSAPQINAIAVLHPRKLGVYTVEAVGGTGAKASYFDLVKAYEHVLGIEGGGHFTSCNMTHGGFGGISRDLLCVQSMDGRLQ----DAHAFTRRLNGILVPGPLCYVAKIDAFVVGNSEMGVDCYKYQINCSRRRSRGRSRLRRRSWLGLNEQDDLLRLCCGRSSCGRSGGTCNAVVCSSSCTFMLLKVSKHGVSRTRRVYVVCDAHRGRCRHPDLNIERANAQALAASQEDREKGRSEGISAARGLQAYWSCQLGEAVLDVFVAKFSRALGPGCIDIVVVGERTLFTLREQGTVRLQKVLGYQPACACKYVVVAGPGEKGAGLTGTTVKEIDEGFATVVEEENLVIGADTDQLMVYK 436          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A024T8H2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8H2_9STRA)

HSP 1 Score: 281 bits (719), Expect = 4.980e-86
Identity = 146/352 (41.48%), Postives = 213/352 (60.51%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFG-GVSRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAASQGDREE-------RNSEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+AREWW+   G  EE+  G+LAVGNVDN+P    K+V GSL G+LRV+ P +  F+I+ LL+E+ +  P+LQ+ IGRF+P +  +  +AVLHP+ L VY ++ VGG G  ASY+KL K YEH LG+DG  HFT+FNMT GGFG    +D +CVQS+DGRLQ FEQD  +F ++L   LVPG +CY +  D+L+   ++M V+CY+YQ +A S   +++       ++++G++ A+ L + W   +GE VL++   KF  A+     D+VV+GE SLF +   G +   K L + P+  C Y                               +N+IIAT + Q MV++
Sbjct:    1 MSLFQAREWWTVASGNTEEYTYGALAVGNVDNDPTPHDKIVVGSLNGILRVYYPTQGEFKIDHLLMEEQLEYPVLQVEIGRFVPHSTNV-GMAVLHPKHLAVYCLDGVGGSGMAASYFKLTKKYEHPLGLDGE-HFTAFNMTMGGFGKSPEKDHICVQSLDGRLQFFEQDRFSFMQQLPTCLVPGALCYAAPTDSLITATSDMSVECYRYQVMATSMVLKKKPGHDDGIKDAKGVTAAKALHSEWRTNIGESVLDIRTGKFHWAVRARSFDVVVLGEFSLFCVTPGGDICFHKRLGFHPSSLCLYNRPKCDNSDST--------------------DNVIIATHAKQWMVYR 330          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A8K1C8Q3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8Q3_PYTOL)

HSP 1 Score: 286 bits (733), Expect = 6.450e-86
Identity = 148/312 (47.44%), Postives = 201/312 (64.42%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFG-------GVSRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAA-------SQGDREERN-SEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKY 891
            MSLF+ REWW+TK   VEE+  G L VGNVDN+  G  K+VTGSL G LR++ P +  F+IE LLLE++IG PILQ+ +G FIP+   + A+AVLHPRK+ ++ +E VGG G  ASY+KL   YEH LG+DG  HFT+FNM +G FG       G  RD LCVQS+DGRLQ FEQD  AF + L    VPGPICY S +DA++   +++ ++CY+YQ LA+       S  D EE++ S   + ++ L   W   LGE +LE+ V +F+        D++V+GE +LF +R  G + LQK L + P+  C Y
Sbjct:    1 MSLFRVREWWTTKTEHVEEYSYGGLVVGNVDNDSSGLDKIVTGSLSGTLRMYYPTQNEFKIEHLLLEENIGHPILQLELGHFIPNQR-VLALAVLHPRKISIFVVEGVGGSGMAASYFKLTLRYEHRLGIDGE-HFTAFNMIYGPFGSPSTSTRGSERDHLCVQSLDGRLQFFEQDRFAFLQPLNNSFVPGPICYASGMDAIIAATSDLQIECYRYQVLASASLKQKKSALDSEEKSGSSSSASSKQLHCDWKLNLGETILEIRVGRFAVQENATSFDLLVLGEFTLFGIRSHGEIYLQKRLGFHPSTMCLY 310          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A5D6XLM6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLM6_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.260e-84
Identity = 148/355 (41.69%), Postives = 216/355 (60.85%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGVS-----RDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAASQGDREERNSEGI------SGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+ REWW  K  + +EF  G+L VGNVDN+  G +K+VTGSL G+LR++ P +  F+IE LLLE+ +  PILQ+++GRF+P+   + A+AVLHPR++ VYT+E VGG G  ASY+KL   YEH LG+DG  HFT+FNM HG FG  +     RD LCVQS+DGRLQ FEQD  AF   L    VPG +CY   +DA+V   +++ ++CY+YQ LA++   +++ ++ G+      +GA+ +   W   LGEPVL++ + +          D++V+GE +LF +R  G + LQK L + P+  C Y    +P            + +D          N+++A+ S    VFK
Sbjct:    1 MSLFQVREWWGVKGERGDEFTSGALVVGNVDNDASGQVKIVTGSLNGVLRMYAPLQSEFKIEHLLLEEKLRHPILQLALGRFVPNHSTL-ALAVLHPRRVSVYTVEGVGGSGLAASYFKLSPRYEHLLGLDGE-HFTAFNMFHGPFGSAASARSDRDHLCVQSLDGRLQFFEQDRFAFLLPLTNSFVPGAVCYAPGMDAVVAATSDLQLECYRYQVLASASLKQKKMHALGVDEHPEAAGAKPIHCEWRLNLGEPVLDIRIGRCFAQETASSFDVLVLGEATLFGIRPHGEIYLQKRLGFHPSAMCLYPRAPAPSAESXXXXXXXXSHMD----------NVLLASHSKLWTVFK 343          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A7S0N219_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N219_9CHLO)

HSP 1 Score: 279 bits (714), Expect = 1.390e-83
Identity = 150/346 (43.35%), Postives = 213/346 (61.56%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGVSRDL--LCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAAS-QGDREERNSEG-ISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMV 1026
            MSLFKAR+WW    G  EEFD G L +GNVDN+P G +KVVTGS QG+LR++ P ER F++EDL+LEQ++  PI+Q+  G F  ++ G  +IAVLHPRKL VYT+ AVG    +ASY+ L K YEH L        T+ N  +G FGG+S ++  +C+QSMDG+L ++E ++ AF+R L   L+PGP+CY SK+D+ +  N+   ++CYKYQ LA+S +G  E R   G ++  + +Q  W   LGE  L++ V +FSR L    VDI+V+ ER+++ L E G  R+Q   +Y PAC   +T+  +  E     T   +     G   +  +  LI A   D L V
Sbjct:    1 MSLFKARDWWRVNCGDEEEFDGGCLCMGNVDNDPSGEVKVVTGSFQGMLRIYNPKERDFKVEDLMLEQNLEEPIIQVEAGHF--TSNGGISIAVLHPRKLAVYTLAAVGSNQNQASYFSLHKNYEHKL------ERTAANFVYGSFGGISPNIHYICLQSMDGQLVVYEHESFAFSRFLHNFLLPGPLCYCSKLDSFITCNSSFEIECYKYQVLASSAEGKSESRGDAGSLTQQKRVQVDWRFILGEAALDIRVGRFSRTLTTCQVDIMVLAERTMYCLSEVGEPRMQMRFDYTPAC---FTLYRNAAEDSGGPTHNVIVASSTGAMHLYRDTQLIWAAKGDVLPV 335          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A2D4BH56_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BH56_PYTIN)

HSP 1 Score: 280 bits (716), Expect = 2.040e-83
Identity = 151/356 (42.42%), Postives = 213/356 (59.83%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFG----------GVSRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAASQGDREERNSEGISGARGLQAY--WSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+ REWW+TK    EEF  G L VGNVDN+ GG  K+VTGSL G LR++ P    F+IE LLLE+ +G PILQ+++G FIP+   I A+AVLHPR+LGVY +E VGG G  A+Y+++ + YEH LG+DG  HFT+FNM HG FG          G  R+ LCVQS+DGRLQ FEQD  AF + L    VPGPICY + +DA++   +++ ++CY+YQ LA++   ++ + +     A   Q +  W   LGE ++++ + +          DI+V+GE +LF +R  G + LQK L + P+  C Y   A+           T N    G       +N+++A+ S    VFK
Sbjct:    1 MSLFQVREWWATKTEHREEFSYGGLLVGNVDNDSGGQAKIVTGSLNGTLRIYLPTHNEFKIEHLLLEESLGHPILQLALGYFIPNQR-ILALAVLHPRRLGVYVVEGVGGSGMSANYFRITQRYEHRLGIDGE-HFTAFNMIHGPFGTTGVPRTGAPGAEREHLCVQSLDGRLQFFEQDRFAFLQPLNNSFVPGPICYANGMDAIIAATSDLQLECYRYQVLASASLKKKAKTALDSDDAAPKQVHCDWKLNLGETLVDIRIGRCFDQESATSFDILVLGEFTLFGVRPHGEIFLQKRLGFHPSTMCLYRRPAAT----------TSNSASAGTM-----DNVLVASHSKLWAVFK 339          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: T0R219_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R219_SAPDV)

HSP 1 Score: 278 bits (712), Expect = 4.050e-83
Identity = 152/346 (43.93%), Postives = 212/346 (61.27%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGM-KVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGV-SRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAASQGDREERNSEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+AR+WW+   G  EE+  G+LA+GNVDNE      K+V GSL G+LR++ P    F+IE LLLE+ +  PILQ++IG F+P     +A+AVLHP+ L VYT+E VGG G  ASY+KL K YEH LG DG  HFT+FNM HG FGG   +D LCVQ++DGRLQ FEQD  AF ++L   LVPGP+CY   ID+++   +++ V+CY+YQ LA S+  +  ++ +  +G++ L A W   +GEPVL+L + + + +      DIVV+ E +LF LR  G V  QK L + P+                AL     N  D          N+++AT + Q M++K
Sbjct:    1 MSLFQARDWWTVTSGTSEEYTHGALAIGNVDNESDQAQAKIVVGSLHGVLRIYYPTSMEFKIEHLLLEEQLEHPILQVAIGAFLPHTTA-QAVAVLHPKLLAVYTLEGVGGSGMAASYFKLSKKYEHHLGQDGE-HFTAFNMLHGPFGGAREKDHLCVQALDGRLQFFEQDRFAFLQQLPTCLVPGPVCYAPSIDSILTATSDLHVECYRYQILATSK--KAAKDEKPATGSKSLHAEWRVNVGEPVLDLQIGRVAPSTSAKSFDIVVLCEFTLFCLRPTGDVCFQKRLGFHPS----------------ALRLYPANDDDAPMT------NVLLATHAKQWMIYK 320          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A421FSM1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FSM1_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.020e-82
Identity = 150/363 (41.32%), Postives = 219/363 (60.33%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGVS---------RDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAASQ----------GDREERNSEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+ REWW+ K  + EE+  G+L VGNVDN+  G +K+VTGSL G+LRV+CP +  FRIE LLLE+++  PILQ+ +G FIP+   I A+A+L PR+LGVY +E +GG G  ASY+K+   YEH LG+DG  HFT++N  +G FG  S         RD LCVQS+DGRLQ FEQD  AF + L    +PG +CY   +DA++   +++ ++CY+YQ LA++             +++   +  S +  +   W   +GE ++++ VA+ S    P   DI+V+GE +LF ++ QG + LQK L + P+  C Y   ASP E G A           G A +   +NL+I++ +    VFK
Sbjct:    1 MSLFQVREWWTAKGEQDEEYTPGALVVGNVDNDASGHVKIVTGSLNGVLRVYCPTQSDFRIEHLLLEENLQRPILQLELGYFIPNQR-ILALAILQPRRLGVYVVEGMGGSGLAASYFKITLRYEHLLGIDGE-HFTAYNFIYGPFGAASSGGTTGRSERDHLCVQSLDGRLQFFEQDRFAFLQPLNNNFLPGALCYAPGMDAVIASTSDLQLECYRYQVLASASLKQKRNALDDDVKDDHQQDSSSFSTQVHCDWKLNIGEVIVDVRVARCSYQETPASFDILVLGEFTLFGIKPQGEIYLQKRLGFHPSAFCPYRRWASPTERGAAA----------GAAGL---DNLLISSHTKLWNVFK 348          
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Match: A0A1V9YNP4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNP4_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.290e-82
Identity = 156/350 (44.57%), Postives = 215/350 (61.43%), Query Frame = 1
Query:    1 MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPG-GGMKVVTGSLQGLLRVHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKLGVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGV-SRDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNNEMGVDCYKYQALAAS----QGDREERNSEGISGARGLQAYWSCQLGEPVLELFVAKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIVASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK 1032
            MSLF+AREWWS   G  EE+   +LA+GNVDN+P  G  K+V GSL G+LRV+ P    F+IE LLLE+ +  PILQ+++G F+P + G+ A+AVLHP+ L VYT+E VGG G  ASY+KL K YEH LG+DG  HFT+FNM  G FGG   +D LCVQ++DGRLQ FEQD  AF ++    LVPG +CY    D+LV   +++ V+CY+YQ LA S    +  +E+     ++ A+ L A W   +GEPVL++ + + +        DIVV+GE +LF LR  G +  QK L + P+ A  Y   A P            +G D+         N+I+A+ + Q M+FK
Sbjct:    1 MSLFQAREWWSVTGGTSEEYTPVALALGNVDNDPELGHAKIVVGSLHGMLRVYYPTHAEFKIEHLLLEEQLEHPILQVAVGAFVPHSTGV-AMAVLHPKLLVVYTLEGVGGTGMGASYFKLSKKYEHHLGLDGE-HFTAFNMVTGPFGGSRDKDHLCVQALDGRLQFFEQDRFAFLQQFPTCLVPGALCYAPATDSLVTAASDLHVECYRYQMLATSLVKKKPTKEDTPDTKVTAAKALHAEWRVNVGEPVLDVRIGRLAAGTSAKSFDIVVLGEFTLFCLRPSGDLCFQKRLGFHPSAAVLYP--ADP------------DGNDD-----TPRTNIIVASHTKQWMIFK 329          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47765.11910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW5_ECTSI1.410e-19379.94Bardet-Biedl syndrome 9, parathyroid hormone-respo... [more]
A0A6H5K7J4_9PHAE1.660e-17062.27Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024T8H2_9STRA4.980e-8641.48Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A8K1C8Q3_PYTOL6.450e-8647.44Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XLM6_9STRA1.260e-8441.69Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S0N219_9CHLO1.390e-8343.35Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A2D4BH56_PYTIN2.040e-8342.42Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
T0R219_SAPDV4.050e-8343.93Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A421FSM1_9STRA1.020e-8241.32Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A1V9YNP4_9STRA1.290e-8244.57Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47765contigH-elongata_contig47765:338..2520 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score568.5
Seed ortholog evalue2.1e-159
Seed eggNOG ortholog2880.D8LTW5
Preferred nameBBS9
KEGG koko:K19398
GOsGO:0000242,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0006996,GO:0008104,GO:0008150,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0031090,GO:0031253,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034451,GO:0034464,GO:0034613,GO:0035869,GO:0036064,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044459,GO:0044463,GO:0044464,GO:0044782,GO:0045444,GO:0048869,GO:0051179,GO:0051641,GO:0060170,GO:0060271,GO:0061512,GO:0070727,GO:0070925,GO:0071840,GO:0071944,GO:0098588,GO:0098590,GO:0120025,GO:0120031,GO:0120036,GO:0120038
EggNOG free text desc.cell projection organization
EggNOG OGsKOG3679@1,KOG3679@2759
COG Functional cat.JM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBardet-Biedl syndrome 9, parathyroid hormone-responsive B1
Ec32 orthologEc-12_004060.1
Exons4
Model size1032
Cds size1032
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47765.11910.1prot_H-elongata_contig47765.11910.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47765 338..2520 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930788.2854733-CDS-H-elongata_contig47765:337..5881622930788.2854733-CDS-H-elongata_contig47765:337..588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 338..588 +
1691679570.560761-CDS-H-elongata_contig47765:337..5881691679570.560761-CDS-H-elongata_contig47765:337..588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 338..588 +
1622930788.306609-CDS-H-elongata_contig47765:924..11651622930788.306609-CDS-H-elongata_contig47765:924..1165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 925..1165 +
1691679570.571839-CDS-H-elongata_contig47765:924..11651691679570.571839-CDS-H-elongata_contig47765:924..1165Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 925..1165 +
1622930788.3292856-CDS-H-elongata_contig47765:1613..17511622930788.3292856-CDS-H-elongata_contig47765:1613..1751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 1614..1751 +
1691679570.5807278-CDS-H-elongata_contig47765:1613..17511691679570.5807278-CDS-H-elongata_contig47765:1613..1751Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 1614..1751 +
1622930788.351122-CDS-H-elongata_contig47765:2118..25201622930788.351122-CDS-H-elongata_contig47765:2118..2520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 2119..2520 +
1691679570.5897408-CDS-H-elongata_contig47765:2118..25201691679570.5897408-CDS-H-elongata_contig47765:2118..2520Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47765 2119..2520 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47765.11910.1

>prot_H-elongata_contig47765.11910.1 ID=prot_H-elongata_contig47765.11910.1|Name=mRNA_H-elongata_contig47765.11910.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=344bp
MSLFKAREWWSTKIGKVEEFDCGSLAVGNVDNEPGGGMKVVTGSLQGLLR
VHCPAERGFRIEDLLLEQDIGTPILQISIGRFIPSAPGIKAIAVLHPRKL
GVYTIEAVGGRGAKASYYKLLKAYEHALGVDGGGHFTSFNMTHGGFGGVS
RDLLCVQSMDGRLQIFEQDAHAFTRRLAGILVPGPICYVSKIDALVVGNN
EMGVDCYKYQALAASQGDREERNSEGISGARGLQAYWSCQLGEPVLELFV
AKFSRALGPGCVDIVVVGERSLFTLREQGTVRLQKVLEYQPACACKYTIV
ASPGEHGVALTGITVNGVDEGFAAIVEEENLIIATDSDQLMVFK
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mRNA from alignment at H-elongata_contig47765:338..2520+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47765.11910.1 ID=mRNA_H-elongata_contig47765.11910.1|Name=mRNA_H-elongata_contig47765.11910.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2183bp|location=Sequence derived from alignment at H-elongata_contig47765:338..2520+ (Himanthalia elongata Himel1 dioecious)
ATGTCCTTGTTTAAAGCTCGAGAATGGTGGTCGACAAAGATCGGAAAAGT GGAAGAGTTCGATTGCGGATCCCTGGCAGTGGGGAACGTGGACAATGAAC CTGGAGGGGGCATGAAGGTTGTTACGGGCAGCCTCCAGGGTTTATTGAGG GTGCACTGCCCGGCAGAGAGAGGTTTTCGTATCGAGGACCTTCTGCTGGA GCAGGACATTGGGACTCCGATCCTCCAAATATCTATAGGACGATTTATCC CGTGAGAGCATACACGTGTGGCAGAACGCAGGAAGTCATAGTCGTTGTAT TCCTCGCCACCGTTCGAAGCCATTTTATTATGATATAATTTCCAAGATAT ATTAACGTTAGGTACTCGCTAAACTTGTCAAAATGAATGGCTGGTTGTAT TTTTTACATCCGAAAACGGATTTTTGACTCGACGATCAGCCTCAGTACGC GCAATTCGTAGAAGCCACATTACACCAGACTGTCCCGCGTATATTTCACT TGGAGCACCGTAAACTCGTACTGAGGCAAATGTCCGACTGACAGCGAGCG AAGGTGGTCGTGATATATCGCCCTTCGCGTTACTCAGTTCTGCTCCGGGA ATCAAGGCAATTGCTGTGCTCCACCCTCGAAAACTCGGAGTGTACACAAT AGAAGCGGTGGGCGGGCGAGGAGCCAAGGCTAGCTATTACAAATTGCTCA AGGCATACGAGCACGCGCTGGGGGTCGATGGAGGGGGACATTTCACCTCT TTTAACATGACACACGGGGGTTTCGGAGGGGTATCGCGCGATCTCTTGTG TGTGCAGAGCATGGATGGTCGTCTCCAGGTTAGGATGGTTCCCCAACAGG GGTTCTATACGCTCTTATCACACCGCACGCAGTGATGTCCTGGTTTTCGA GGCCAAACATCGCAGGTACTTTGTACGAAAAATTCTGGAAGGAAAACATG TAACGCGTGGTTCGAAGGCACCATAACGGCAAGAGGAACTCGAACAATGT TTCATTGCGTTCGTCGTGTGGTTATATGATACACTCACCCCCCGATCAAG AGAAACTTCGAACTCTTAGCTGGTGGGGCATTCTCGGGTGAATCTTATGC TAAGTGAAGGCGCAAGTAGCAGCTGCACGATATAATCATGGTTATCTGCT CGCCCCGTAACATTGTAATAATGGCAGACGTCGCCTGTCGTATTCCGGAA CTGAATCCTTGCTTCTCATCTCCTCTCTCACGGAGAAGCGGAACTCTCAT CTTCACACGGACAATGAACTATACAGATCTTCGAACAAGACGCACACGCG TTTACAAGACGCCTCGCCGGTATCCTAGTCCCTGGCCCAATATGCTACGT TTCCAAAATTGATGCCTTAGTCGTCGGAAACAATGAGATGGGTGTCGACT GCTACAAGTATCAGGTACATTTGCCCGACCTTCATTTGGACCGCCTTCGA AAAACTGCGTCGCCTAGCTCTGGAAATGAATTCCATTTAATCAAAACCTA TGGAAAAACCATATTGCTAGGCTTTCGTTGCCGTTGATCTACAAACCCCT TACGTTGAGTCGCATATATTGGACGTGGTTCTACTCTAAACTTGGCCCCA GAGCACGCCGAACCGCCCTGTTGCGGTGTTAGCGTTCGGAAACGTATTTT AACACGACATATCCCCTTTTCAACATGCTTTAGCTTCTGTGTGTGATATT TTACCTCCGTGCCGTTAGCCATATCCCCTAGAATTAGCGCGTGATGTCGA TCGCGCATGTATATTACGTCCTCTAATACAGGCGCTGGCAGCAAGCCAGG GAGACCGAGAGGAACGAAATAGCGAGGGGATTTCGGGTGCCCGAGGACTG CAGGCCTACTGGTCATGTCAACTGGGGGAGCCTGTCTTAGAACTATTCGT CGCCAAGTTCAGTCGTGCGTTGGGACCAGGGTGCGTGGACATCGTTGTCG TGGGGGAGAGATCGCTCTTCACGCTGCGAGAGCAAGGCACCGTAAGGTTG CAGAAGGTGCTCGAGTACCAGCCAGCCTGCGCGTGCAAGTACACCATTGT AGCATCCCCCGGGGAACATGGCGTGGCACTCACGGGCATTACGGTAAACG GAGTTGACGAGGGATTTGCTGCGATTGTCGAGGAGGAAAATCTCATCATC GCCACTGACAGCGACCAGCTCATGGTGTTCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig47765:338..2520+

>mRNA_H-elongata_contig47765.11910.1 ID=mRNA_H-elongata_contig47765.11910.1|Name=mRNA_H-elongata_contig47765.11910.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2064bp|location=Sequence derived from alignment at H-elongata_contig47765:338..2520+ (Himanthalia elongata Himel1 dioecious)
ATGTCCTTGTTTAAAGCTCGAGAATGGTGGTCGACAAAGATCGGAAAAGT
GGAAGAGTTCGATTGCGGATCCCTGGCAGTGGGGAACGTGGACAATGAAC
CTGGAGGGGGCATGAAGGTTGTTACGGGCAGCCTCCAGGGTTTATTGAGG
GTGCACTGCCCGGCAGAGAGAGGTTTTCGTATCGAGGACCTTCTGCTGGA
GCAGGACATTGGGACTCCGATCCTCCAAATATCTATAGGACGATTTATCC
CATGTCCTTGTTTAAAGCTCGAGAATGGTGGTCGACAAAGATCGGAAAAG
TGGAAGAGTTCGATTGCGGATCCCTGGCAGTGGGGAACGTGGACAATGAA
CCTGGAGGGGGCATGAAGGTTGTTACGGGCAGCCTCCAGGGTTTATTGAG
GGTGCACTGCCCGGCAGAGAGAGGTTTTCGTATCGAGGACCTTCTGCTGG
AGCAGGACATTGGGACTCCGATCCTCCAAATATCTATAGGACGATTTATC
CCTTCTGCTCCGGGAATCAAGGCAATTGCTGTGCTCCACCCTCGAAAACT
CGGAGTGTACACAATAGAAGCGGTGGGCGGGCGAGGAGCCAAGGCTAGCT
ATTACAAATTGCTCAAGGCATACGAGCACGCGCTGGGGGTCGATGGAGGG
GGACATTTCACCTCTTTTAACATGACACACGGGGGTTTCGGAGGGGTATC
GCGCGATCTCTTGTGTGTGCAGAGCATGGATGGTCGTCTCCAGTTCTGCT
CCGGGAATCAAGGCAATTGCTGTGCTCCACCCTCGAAAACTCGGAGTGTA
CACAATAGAAGCGGTGGGCGGGCGAGGAGCCAAGGCTAGCTATTACAAAT
TGCTCAAGGCATACGAGCACGCGCTGGGGGTCGATGGAGGGGGACATTTC
ACCTCTTTTAACATGACACACGGGGGTTTCGGAGGGGTATCGCGCGATCT
CTTGTGTGTGCAGAGCATGGATGGTCGTCTCCAGATCTTCGAACAAGACG
CACACGCGTTTACAAGACGCCTCGCCGGTATCCTAGTCCCTGGCCCAATA
TGCTACGTTTCCAAAATTGATGCCTTAGTCGTCGGAAACAATGAGATGGG
TGTCGACTGCTACAAGTATCAGATCTTCGAACAAGACGCACACGCGTTTA
CAAGACGCCTCGCCGGTATCCTAGTCCCTGGCCCAATATGCTACGTTTCC
AAAATTGATGCCTTAGTCGTCGGAAACAATGAGATGGGTGTCGACTGCTA
CAAGTATCAGGCGCTGGCAGCAAGCCAGGGAGACCGAGAGGAACGAAATA
GCGAGGGGATTTCGGGTGCCCGAGGACTGCAGGCCTACTGGTCATGTCAA
CTGGGGGAGCCTGTCTTAGAACTATTCGTCGCCAAGTTCAGTCGTGCGTT
GGGACCAGGGTGCGTGGACATCGTTGTCGTGGGGGAGAGATCGCTCTTCA
CGCTGCGAGAGCAAGGCACCGTAAGGTTGCAGAAGGTGCTCGAGTACCAG
CCAGCCTGCGCGTGCAAGTACACCATTGTAGCATCCCCCGGGGAACATGG
CGTGGCACTCACGGGCATTACGGTAAACGGAGTTGACGAGGGATTTGCTG
CGATTGTCGAGGAGGAAAATCTCATCATCGCCACTGACAGCGACCAGCTC
ATGGTGTTCAAGGCGCTGGCAGCAAGCCAGGGAGACCGAGAGGAACGAAA
TAGCGAGGGGATTTCGGGTGCCCGAGGACTGCAGGCCTACTGGTCATGTC
AACTGGGGGAGCCTGTCTTAGAACTATTCGTCGCCAAGTTCAGTCGTGCG
TTGGGACCAGGGTGCGTGGACATCGTTGTCGTGGGGGAGAGATCGCTCTT
CACGCTGCGAGAGCAAGGCACCGTAAGGTTGCAGAAGGTGCTCGAGTACC
AGCCAGCCTGCGCGTGCAAGTACACCATTGTAGCATCCCCCGGGGAACAT
GGCGTGGCACTCACGGGCATTACGGTAAACGGAGTTGACGAGGGATTTGC
TGCGATTGTCGAGGAGGAAAATCTCATCATCGCCACTGACAGCGACCAGC
TCATGGTGTTCAAG
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