mRNA_H-elongata_contig4761.11897.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A0A6H5JMR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR6_9PHAE) HSP 1 Score: 253 bits (646), Expect = 8.000e-84 Identity = 128/171 (74.85%), Postives = 147/171 (85.96%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKV--NLYERLGREVIEEISTAFYGRVFDDEEWFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKG-HFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLVDYHNKMAESSGKV 504
QALTA A A SG TREE +A+DKV +L+ERLG++ IE IS FY RVFDDEEWFRSIFSA+TK EA++NQ+DFLVERLGGPK+YT+RKG H+RLI RHSPYDLNPKSA RWLEHM+AA+D+ GVD +S+ LLMAFFSHMAFFL AGKDM NPSNLVDYHNKMAES K+
Sbjct: 2 QALTACAFAGSGVTREESVALDKVKPSLFERLGQDTIEGISALFYDRVFDDEEWFRSIFSASTKREAVQNQADFLVERLGGPKLYTKRKGKHYRLIHRHSPYDLNPKSAARWLEHMEAAIDASGGVDAESKRLLMAFFSHMAFFLVAGKDMSNPSNLVDYHNKMAESCPKI 172
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A0A0U9HKG8_KLENI (Hemoglobin-like protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKG8_KLENI) HSP 1 Score: 168 bits (426), Expect = 1.940e-50 Identity = 83/161 (51.55%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDEE-WFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLVDYHNK 480
Q+L A SG +E VD VNLYERLG +V ++ST FY RV+DD+E WFR IF+ +T+ A +NQ +F ++RLGGP +Y+QRKGH LI RH PY + ++A+RWLEHM ALD +G+D+DSR L FF H A+FL AGK+++N + LV Y K
Sbjct: 2 QSLQEQASQKSGVPLDEAFQVDAVNLYERLGHQVFIDLSTNFYTRVYDDKETWFRDIFANSTREHATQNQYEFFIQRLGGPPLYSQRKGHPALIGRHGPYAVTERAAQRWLEHMDEALDETAGIDEDSRQRLRNFFRHTAYFLVAGKELVNRNRLVGYGGK 162
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: D8T7E2_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T7E2_SELML) HSP 1 Score: 161 bits (407), Expect = 1.050e-47 Identity = 75/150 (50.00%), Postives = 109/150 (72.67%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVF-DDEEWFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMM 447
Q+L A SG ++++ +D++NLY++LG E ++ST FY RV+ DDEEWFRSIF+ ++K AI+NQ +F ++R+GGP +Y++RKGH LI RH PY + ++A RW+EHM AALDS+ +D DS+ ++ FF H AFFL AGK+MM
Sbjct: 2 QSLQDRASELSGVSQDDAFEIDEINLYKKLGHETFVKLSTNFYNRVYADDEEWFRSIFANSSKDAAIQNQYEFFIQRMGGPPLYSRRKGHPALIGRHGPYPVTERAAERWIEHMTAALDSVEEIDADSKKRMLKFFRHTAFFLVAGKEMM 151
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: UPI001FB16E89 (two-on-two hemoglobin-3 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB16E89) HSP 1 Score: 160 bits (405), Expect = 3.370e-47 Identity = 75/155 (48.39%), Postives = 110/155 (70.97%), Query Frame = 1
Query: 31 SGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDE-EWFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLVDYHNKMAES 492
SG + + A+D++NL+E+LG++ +ST FY RV+DDE EWFRSIF+ ++K +AI+NQ +F ++R+GGP +Y++RKGH LI RH P+ + ++A RWL+HM+ ALDS + +D DS+ +M FF H AFFL AG +M NP+ V K A S
Sbjct: 12 SGVDQTDAFAIDEINLFEKLGKQTFINLSTHFYNRVYDDEQEWFRSIFANSSKEDAIQNQYEFFIQRMGGPPLYSERKGHPALIGRHRPFPVTHEAAERWLQHMQQALDSTADIDSDSKTKMMNFFRHTAFFLVAGNEMKNPNQGVPPPCKHATS 166
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A0A7S1GAZ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAZ3_9STRA) HSP 1 Score: 161 bits (407), Expect = 9.530e-47 Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDD-EEWFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLVDYHNKMAESSG 498
QAL A +G T EE A+D+VN++ERLG++V ++ST FY RV+DD E WFR IF+ + K +AI+NQ +F ++R+GGP +Y+ RKGH LI RH +D++P +ARRWL HM+AALD+ +D DSR + AF H A+FL AG+DMM AE G
Sbjct: 63 QALQEAASRNAGVTSEEAFALDEVNIFERLGKDVFVKLSTEFYNRVYDDGEAWFRDIFAGSKKEDAIQNQYEFFIQRMGGPPLYSTRKGHPALIGRHRTFDVSPAAARRWLTHMEAALDATPEIDGDSRKRMWAFLRHTAWFLVAGQDMMKAREAEAAAAAAAEDGG 229
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A9S385_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S385_PHYPA) HSP 1 Score: 158 bits (400), Expect = 1.210e-46 Identity = 73/146 (50.00%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 31 SGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDE-EWFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLV 465
SG +++ +D+VNL++RLG + ++ST FY RV+DD+ EWFR IFS++TK +AIRNQ +F V+R+GGP +Y+QRKGH LI RH P+ + + A RWLEHM+AAL+ +D DS+ + FF H A+FL AGK++MN N +
Sbjct: 11 SGVKQDDAFKIDEVNLFQRLGLDTFIKLSTNFYARVYDDDQEWFRKIFSSSTKEDAIRNQYEFFVQRMGGPPLYSQRKGHPALIGRHGPFTFDEQGAVRWLEHMQAALNDTPEIDADSKKRMFDFFKHTAYFLVAGKELMNRRNAM 156
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A9TSV7_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TSV7_PHYPA) HSP 1 Score: 156 bits (395), Expect = 1.070e-45 Identity = 77/169 (45.56%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVF-DDEEWFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLVDYHNKMAESSGKV 504
QAL A SG E+ A+D VNLYE+LG + ++ST FY V+ DD++WFRSIF+ +TK +AI+NQ +F ++R+GGP +Y RKG LI RH PY + ++A RWL HMK ALD +D DS+ + FF H AFFL AGK++ N LV + G+
Sbjct: 2 QALNRQASCMSGVAHEDATAIDNVNLYEKLGFDTFVKLSTNFYNEVYNDDQQWFRSIFANSTKDDAIQNQYEFFIQRMGGPPLYAHRKGSTALIARHGPYPITERAAARWLFHMKTALDKSPEIDLDSKTRMFNFFKHTAFFLVAGKELTNHHRLVGNYGVGGRHMGRA 170
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: H6U807_WOLAU (Truncated hemoglobin n=1 Tax=Wolffia australiana TaxID=161112 RepID=H6U807_WOLAU) HSP 1 Score: 155 bits (391), Expect = 2.730e-45 Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDEE-WFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSN 459
Q+L A SG + ++D+ NL+ RLG + ++STAFY RVF DE+ WFRSIF + K +AI+NQ +F V+R+GGP +Y+QRKGH LI RH PY + ++A RWL HM+ ALD+ G+D DSR +M FF H AFFL AG + NP++
Sbjct: 2 QSLQQKAAEWSGVASADAFSIDETNLFHRLGLQTFVDLSTAFYDRVFADEQLWFRSIFGESKKEDAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPYPVTHQAAERWLHHMEQALDATPGIDPDSRIKMMNFFRHTAFFLVAGDKLKNPAD 155
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A0A3Q7HPE4_SOLLC (Uncharacterized protein n=5 Tax=Solanum TaxID=4107 RepID=A0A3Q7HPE4_SOLLC) HSP 1 Score: 155 bits (391), Expect = 3.830e-45 Identity = 73/141 (51.77%), Postives = 102/141 (72.34%), Query Frame = 1
Query: 31 SGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDEE-WFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMN 450
SG ++ +AVD++NL+++LG + +ST FY RV+DDEE WFRSIFS + K EAIRNQ +F V+R+GGP +Y+QRKGH LI RH + + K+A RWL HM+ ALDS + +D+DS+ ++ FF H AFFL AG ++ N
Sbjct: 12 SGVDPKDAVAVDEINLFQKLGLQTFINLSTNFYNRVYDDEEEWFRSIFSNSNKEEAIRNQYEFFVQRMGGPNLYSQRKGHTALIGRHRTFPVTHKAAERWLHHMQQALDSAADIDEDSKTKMINFFRHTAFFLVAGVELKN 152
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Match: A0A059CT31_EUCGR (Uncharacterized protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CT31_EUCGR) HSP 1 Score: 154 bits (390), Expect = 5.950e-45 Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 1
Query: 1 QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDEE-WFRSIFSATTKAEAIRNQSDFLVERLGGPKVYTQRKGHFRLITRHSPYDLNPKSARRWLEHMKAALDSLSGVDKDSRDLLMAFFSHMAFFLTAGKDMMNPSNLV 465
Q+L A SG +E+ A+D NL+E+LG +ST FY RV+DDEE WFRSIF+ + K EAI+NQ +F V+R+GGP +Y+QRKGH LI RH P+ + ++A RWL HM+ ALDS++ +D DS+ +M FF H AFFL AG ++ N + V
Sbjct: 2 QSLQEKAAQWSGVDQEDAFAIDGTNLFEKLGLPTFVNLSTNFYTRVYDDEEEWFRSIFANSKKEEAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPFPVTRQAAERWLHHMQQALDSVAEIDDDSKTKMMNFFRHTAFFLVAGDELKNQNQQV 157 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4761.11897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig4761.11897.1 >prot_H-elongata_contig4761.11897.1 ID=prot_H-elongata_contig4761.11897.1|Name=mRNA_H-elongata_contig4761.11897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp QALTAYACAASGFTREEGLAVDKVNLYERLGREVIEEISTAFYGRVFDDEback to top mRNA from alignment at H-elongata_contig4761:1147..2544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig4761.11897.1 ID=mRNA_H-elongata_contig4761.11897.1|Name=mRNA_H-elongata_contig4761.11897.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-elongata_contig4761:1147..2544- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig4761:1147..2544- >mRNA_H-elongata_contig4761.11897.1 ID=mRNA_H-elongata_contig4761.11897.1|Name=mRNA_H-elongata_contig4761.11897.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig4761:1147..2544- (Himanthalia elongata Himel1 dioecious)back to top |