mRNA_H-elongata_contig47142.11817.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: D7FMG2_ECTSI (Cycloeucalenol cycloisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMG2_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 4.570e-141 Identity = 204/269 (75.84%), Postives = 232/269 (86.25%), Query Frame = 3
Query: 3 LACAEKNPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQS--SIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMKG 803
LACA+ NPAKR WE+FNL Y+VFWVGCFA II FS+YE FDEV+Y V FGL +PI AFPL+S+HPSEA + VGQR+GV+ANVWIA+YSFIGNYWYTHYFY VLGAKYTFPSWRLNDVPI LI AT+FYFSLYH LSNMAIRKVVTSFEA +R VTLVVLVGVMSYA AF ETLTISGFPYY+FEDRDMAYVVGSAFYGIYFVVSFPMFYAF+EWP + + + ++ S G+W AA++++GA MLILCLLDFVRLAVG++ MKG
Sbjct: 95 LACAKTNPAKRAWEVFNLRYAVFWVGCFAAIIGFSLYEDFDEVSYMVVCFGLSLPIVAFPLVSMHPSEAGLAVGQRYGVRANVWIAIYSFIGNYWYTHYFYCVLGAKYTFPSWRLNDVPIPLIAATVFYFSLYHALSNMAIRKVVTSFEATTSRAVTLVVLVGVMSYAVAFTETLTISGFPYYEFEDRDMAYVVGSAFYGIYFVVSFPMFYAFDEWPQEDENKLADRKAGNSARGLWGAAVDSLGASMLILCLLDFVRLAVGSEFFMKG 363
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A836CJT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT1_9STRA) HSP 1 Score: 290 bits (743), Expect = 3.040e-91 Identity = 150/263 (57.03%), Postives = 179/263 (68.06%), Query Frame = 3
Query: 3 LACAEKNPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADL 791
LA N AKR WE+FNL Y V W+ FA I+ F +Y+ V Y V GLCVPI PL+ S+ +P+ +RFGV+AN+W+A+YSFIGNYWYTHYFY VL A Y+ P WRLNDVPI L AT FYF YH LSN+A+RKVVT++ NAAR+V LV LV MSY AFMETLTIS +P Y FEDR+MAY +GSAFYGIYF+VSFPMFY F+EWP Q +W +++MG M IL LLD VRLA G L
Sbjct: 54 LADPVTNSAKRAWEVFNLCYGVVWIAVFAYIVYFGVYKDLTRVGYMVVCGGLCVPILLSPLVMPSKSDKKLPLLERFGVRANLWMAIYSFIGNYWYTHYFYCVLRASYSMPCWRLNDVPIQLYFATFFYFCFYHSLSNLALRKVVTTYVHNAARSVFLVALVLAMSYFVAFMETLTISAYPDYSFEDREMAYKLGSAFYGIYFIVSFPMFYRFDEWPQ---------QLKQPSLWQTCVDSMGTGMAILTLLDAVRLATGVPL 307
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A7S3XQ29_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ29_HETAK) HSP 1 Score: 286 bits (732), Expect = 4.450e-90 Identity = 140/211 (66.35%), Postives = 164/211 (77.73%), Query Frame = 3
Query: 15 EKNPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEE 647
++N AKR +EIF L Y+ FWVGCFA+I+ F +YE FDE AYFAV GLCVP+F +P L+ E + P+ +R+ KA++W+AVYSFIGNYWYTHYFYSVL A YTFPSWRLNDVPI L AT FYFS YHV SNMA+RKV+T++ AART L LV +SYATAF ETLTISGFPYY FEDR+MAY VGS FYGIYF+VSFPMF E
Sbjct: 64 KENSAKRSYEIFTLKYTPFWVGCFAVIVGFQLYESFDEAAYFAVCSGLCVPLFLYPFLA----ETETPLARRYAAKASLWLAVYSFIGNYWYTHYFYSVLRASYTFPSWRLNDVPIPLYFATFFYFSTYHVFSNMALRKVLTTYAPGAARTAFLCSLVFALSYATAFAETLTISGFPYYAFEDRNMAYTVGSVFYGIYFLVSFPMFQRLNE 270
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A7S2V4D0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4D0_9STRA) HSP 1 Score: 280 bits (717), Expect = 8.700e-88 Identity = 149/262 (56.87%), Postives = 177/262 (67.56%), Query Frame = 3
Query: 12 AEKNPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVM 797
+ +NP KR +E+F L Y+ W+G FA I+ +YE EV Y V GLC+P+F +P VP+ +R+ KANVW+A+YSFIGNYWYTHYFYSVL A YTFPSWRLNDVPI L AT FYFS YHV SNMAIRKVVTSF+ AR L L+ MSY TAF ETLTIS FPYY FEDR+MAY VGSAFYGIYF+VSFPMFY E K + G T + ++++GA MLIL LLD VRL +G L +
Sbjct: 32 SSENPPKREYELFCLYYTPIWIGIFAFIVVAQVYESMAEVEYMVVCGGLCIPLFLYPHFCSE--SKTVPLAERYSFKANVWLAIYSFIGNYWYTHYFYSVLKASYTFPSWRLNDVPICLYFATFFYFSTYHVFSNMAIRKVVTSFQEGWARWFFLAALILAMSYFTAFAETLTISSFPYYDFEDRNMAYTVGSAFYGIYFIVSFPMFYRIYE---KKEAGQGFTLGQV------IIDSLGAGMLILILLDIVRLYLGIPLTI 282
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: F0Y312_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y312_AURAN) HSP 1 Score: 278 bits (710), Expect = 1.150e-86 Identity = 141/261 (54.02%), Postives = 177/261 (67.82%), Query Frame = 3
Query: 21 NPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFP-LLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMK 800
N KR E++ L Y+V W+G FA I+ F YE FD +AYF V GL +P++A P LL + P+ +R+ KANVW+A++ F+GNYWYTHYFYSVLGA YT P+WRLNDVP+A+ AT FYF YHVLSN A+RK+ TS+E + R + MSY TAFMETLTISGFPYY FEDRDMAY VGSAFYGIYF+VSFPMF +E P + +++ A+ A+ + M +LCLLDFVRLA+G MK
Sbjct: 34 NAPKRATELWFLAYAVVWIGAFACIVGFEWYERFDALAYFLVCGGLALPLYAQPFLLPALTYDERRPLAERYSFKANVWLAIFGFVGNYWYTHYFYSVLGAAYTMPAWRLNDVPVAMFFATHFYFCFYHVLSNAALRKIRTSYEPSKRRLAFEAASIVAMSYLTAFMETLTISGFPYYSFEDRDMAYTVGSAFYGIYFLVSFPMFLRLDETPPT------VVNGATHDLFATAVEALASSMAVLCLLDFVRLALGIPFAMK 288
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A6U4EXF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EXF3_9STRA) HSP 1 Score: 265 bits (676), Expect = 2.330e-81 Identity = 142/267 (53.18%), Postives = 180/267 (67.42%), Query Frame = 3
Query: 3 LACAEKNPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMKG 803
LA A++ P K+ +E F YSV W+G F +IIA +YE F EV Y VL GL +P+F P+L+ +E +P +R+G KAN WI +YSFIGNYWYTHYF+SVL A YTFPSWRLN VP L AT FYFS YHVLSN +RKV T++ A AR V ++V +SYATAFMET TI+GFPYY FE+R MAY VGSAFYGIYF+ SFPMF+ +E + +G ++ ++ ++A G MLIL LD VRLA+ L + G
Sbjct: 46 LAGADQ-PGKQAYEHFAAWYSVVWMGAFGVIIAAQLYEQFTEVEYLGVLGGLALPLFLQPVLAPAQAERSLPFWKRYGFKANAWIWIYSFIGNYWYTHYFFSVLKANYTFPSWRLNYVPFCLYLATHFYFSSYHVLSNALLRKVATTYAAGPARWVFSALMVLCLSYATAFMETFTIAGFPYYTFENRSMAYTVGSAFYGIYFIYSFPMFFLLDE------RSYGPART----LYETVVDACGCGMLILTTLDLVRLALSIPLTIPG 301
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A8J5XCH9_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCH9_DIALT) HSP 1 Score: 260 bits (664), Expect = 1.230e-79 Identity = 134/262 (51.15%), Postives = 172/262 (65.65%), Query Frame = 3
Query: 21 NPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLLS-VHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMKG 803
N +K +E++ L YS+FW+GCFA I+AF MYE DE Y V GL P+ P L+ + P EA P+ QR+ KAN WI ++S IGNYWYTHYFY+VL A+YT P+WRLNDVP+AL AT FYF+ YH SN+ +RK+ T++ ++AR V V +Y TAFMET TIS +P Y FEDR MAY VGSAFYGIYF+VSFP+FY +E K ++ A + A+G+ ML+L LLD VRL +G MKG
Sbjct: 41 NESKYLYEVWALKYSIFWIGCFAAIVAFQMYERLDENGYMLVCGGLAAPLLLQPFLAPLGPREAAQPLAQRYSFKANAWIFIFSHIGNYWYTHYFYTVLKARYTMPAWRLNDVPLALTFATHFYFTTYHTFSNLMLRKIETTWRPSSARAVFTAASVVAFAYFTAFMETFTISAYPDYSFEDRFMAYTVGSAFYGIYFIVSFPVFYLLDETAAKHT------------LFQACMEALGSGMLVLMLLDLVRLLLGIPFAMKG 290
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A7S0DTR5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTR5_9EUKA) HSP 1 Score: 259 bits (663), Expect = 3.470e-79 Identity = 135/261 (51.72%), Postives = 176/261 (67.43%), Query Frame = 3
Query: 21 NPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFP-LLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMK 800
N KR WE+F+L Y VFW+ CFAIII +YE FD Y V GL P+ P LL E+DVP+ +R+ +KAN+WI ++ FIGNYWYTHYFY+VL A Y+ PSW LN VPI + AT FYF YHVLSN+A+RK ++F A R + ++ LV +MSYATAFME+LTISGFP Y F+DRD+AY +GSAFYGIYF+VSFPMF +E P K +++ A+ A+ + M +L LLD VR+ +G DL ++
Sbjct: 55 NSCKRNWEVFSLTYGVFWITCFAIIIGGELYESFDREHYMIVCGGLATPLLLQPILLPSITGESDVPLFERYSLKANLWIFIFGFIGNYWYTHYFYNVLEAHYSMPSWDLNGVPIPMYLATHFYFCFYHVLSNLALRKAYSTFSPGAMRRLFVISLVLIMSYATAFMESLTISGFPCYGFKDRDLAYTLGSAFYGIYFIVSFPMFLRLDESPPKK-----------WDLFTVAVEALASGMAVLMLLDIVRVYMGIDLNIR 304
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A7S2P5L6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P5L6_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.890e-78 Identity = 136/271 (50.18%), Postives = 175/271 (64.58%), Query Frame = 3
Query: 3 LACAEKNPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPI----FAFPLLSVHPSEADVPVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGTTQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMKG 803
L CA P KR +E++ L Y+ W+G FA ++AF +YE D Y + GL +P F P ++ +A +R+ +KAN+WIAVYSFIGNYWYTHYFYSVL A+Y+ P+ RLN+VPIAL AT FYFS YH SN+ +R V SFE R V +V SY TAFMETLTIS +PYY FED+ MAY GSAFYGIYF+VSFP F+ FE + + +H T +W +++ GA M+ILCLLDFVRL +G +LV+ G
Sbjct: 63 LPCAVTEPTKRAYEVYTLIYTTIWIGIFACVVAFQIYERLDAWGYLYLCGGLSLPFLLQPFVLPSCGMNSPDAHRKWYERYSMKANLWIAVYSFIGNYWYTHYFYSVLKARYSMPAHRLNNVPIALYFATHFYFSTYHAFSNILLRWVTRSFENGFMRNVLFWSVVVSFSYFTAFMETLTISSYPYYSFEDKHMAYTTGSAFYGIYFLVSFPTFFYFETQVDDKEGKHTT-------LWETFVSSCGAGMMILCLLDFVRLYIGVNLVVGG 326
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Match: A0A1E7F4W0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4W0_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.820e-77 Identity = 138/288 (47.92%), Postives = 185/288 (64.24%), Query Frame = 3
Query: 21 NPAKRRWEIFNLGYSVFWVGCFAIIIAFSMYEMFDEVAYFAVLFGLCVPIFAFPLL-----------SVHPSEADV--PVGQRFGVKANVWIAVYSFIGNYWYTHYFYSVLGAKYTFPSWRLNDVPIALIGATIFYFSLYHVLSNMAIRKVVTSFEANAARTVTLVVLVGVMSYATAFMETLTISGFPYYQFEDRDMAYVVGSAFYGIYFVVSFPMFYAFEEWPNKSDKQHGT---TQSSIEGIWSAALNAMGACMLILCLLDFVRLAVGADLVMKG*DSRAILRYQM 836
P+KR +EI+ L Y+ W+ F I+AF +YE FDE +Y V GL +P P+L +++ S DV P+ +R+ KAN+W+AVYSFIGNYWYTHYFYSVL AKYT P+ RLN+VPIAL AT FYFS YHV SNM +RKV T+++ N R + + +V +Y TAFMETLTIS +P Y FEDRDMAY VGSAFYGIYF+VSFP F+ F++ +K D ++S+ W +++ G M+I+ LLD VRL + LV+ D L+ ++
Sbjct: 43 EPSKRAYEIYVLCYTPIWIIAFCCIVAFGLYEDFDEWSYMKVCVGLSLPYLLQPILYPSAGTSSSTSTINSSNPDVQRPILERYSFKANLWLAVYSFIGNYWYTHYFYSVLHAKYTMPAHRLNNVPIALYFATHFYFSTYHVFSNMLLRKVTTTYQPNLTRKILYIAVVATFAYFTAFMETLTISAYPDYSFEDRDMAYTVGSAFYGIYFIVSFPAFFVFDQDIDKKDNXXXXXXXSKSTKISAWDTIISSCGYGMIIMILLDIVRLYLDIPLVVGSSDVVCSLKGEI 330 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47142.11817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47142.11817.1 >prot_H-elongata_contig47142.11817.1 ID=prot_H-elongata_contig47142.11817.1|Name=mRNA_H-elongata_contig47142.11817.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp MYEMFDEVAYFAVLFGLCVPIFAFPLLSVHPSEADVPVGQRFGVKANVWIback to top mRNA from alignment at H-elongata_contig47142:473..3167+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47142.11817.1 ID=mRNA_H-elongata_contig47142.11817.1|Name=mRNA_H-elongata_contig47142.11817.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2695bp|location=Sequence derived from alignment at H-elongata_contig47142:473..3167+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47142:473..3167+ >mRNA_H-elongata_contig47142.11817.1 ID=mRNA_H-elongata_contig47142.11817.1|Name=mRNA_H-elongata_contig47142.11817.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig47142:473..3167+ (Himanthalia elongata Himel1 dioecious)back to top |