mRNA_H-elongata_contig46701.11770.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: D8LC12_ECTSI (GBP5, guanylate-binding protein (Divergent) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC12_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 1.100e-161 Identity = 251/335 (74.93%), Postives = 281/335 (83.88%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGS-EVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIETGMRACDNGPPVPPADMEVDMEEAMQQELLVGFECEAKEIGAKDEAVVEGRR 1002
IS +DPCTQGVDVSRAVVPL++F+T+ GCTAP+GVS S +VRV FADVEGQGDRD YDARLASAILPLTKCVIFNWRDSLQVDR+LNLLGVMQRAAHNVDLG DDG + KFGHLHVVFRDWNYSGTAE+VKKQLF LD RGMG EVA+KNELRRTITAAFASVTVWLFPAPVEMTSELSKEL SEDLS F+ +L RS LSSQL+ P FG ANP+TGHSLGSLVPA+V+VLN G++IMP+S YQQMLD EA+++KKTYL KA+ALIETGM+ACDNGPPVPP D+E DME+ +Q LL FE EAK GAK +AV EG +
Sbjct: 50 ISNDKDPCTQGVDVSRAVVPLKDFATLDGCTAPRGVSTSNQVRVLFADVEGQGDRDAAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLG---------DDGEGTGGSKFGHLHVVFRDWNYSGTAEDVKKQLFGLDNRGMGSEVAVKNELRRTITAAFASVTVWLFPAPVEMTSELSKELKSEDLSEGFVSELKAFRSTLSSQLSAPTVFGPANPVTGHSLGSLVPALVEVLNKGEVIMPQSTYQQMLDMEAQQVKKTYLSKANALIETGMKACDNGPPVPPKDLEADMEDEIQA-LLSDFESEAKTRGAKADAVAEGAK 374
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A5D6XRZ9_9STRA (GBP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRZ9_9STRA) HSP 1 Score: 233 bits (595), Expect = 1.080e-65 Identity = 124/271 (45.76%), Postives = 170/271 (62.73%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMK 810
IS ++PCTQGVD++ +PL EFS +HG + + G ++ V F D EGQGDRD+TYD+RL S +L +K VIFNW+DSLQ DR+LNLL V+ RAA ++L D ++ V FGHLH++FRDW++ T E+V K LFA +K G G E A++N R + AF S+T+WLFPAPV T+ LS ++ + L F +L LR+ L+ QL PM F P+T L ++P +VD LNS +IMPES Y M+ EA +K
Sbjct: 89 ISNLREPCTQGVDLAARFLPLAEFSALHGGASVRPAGGGQMLVGFVDAEGQGDRDITYDSRLVSPVLLASKTVIFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGDNAKV---FGHLHIIFRDWSFVDSTPEQVFKDLFAKEK-GRGEEAAVRNLARANLVDAFESITIWLFPAPVANTASLSDKIRFDQLQRPFQDKLRELRACLARQLQAPMRFN-QQPLTARLLTQVIPGLVDALNSDQVIMPESIYASMVRAEANAVK 345
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A6A3TSF2_9STRA (GBP domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TSF2_9STRA) HSP 1 Score: 232 bits (592), Expect = 2.860e-65 Identity = 129/283 (45.58%), Postives = 176/283 (62.19%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
IS ++PCTQGVD+S ++PL FS ++GC G +G+ + V F D EGQGDRD+TYD+RL S +L +K V+FNW+DSLQ DRILNLL V+ RAA ++L D ++ V FGHLH+VFRDW++ T EEV + LF +K G EV ++N R + AF S+ +WLFPAPVE T+ L ++ E L F +L LR LSSQL +PM F P+T L ++PA+VD LNS +IMPES Y M+ EA+ +K++ + A E
Sbjct: 84 ISNLREPCTQGVDLSAHLLPLSRFSGLNGCPPVTG-TGTGIHVGFVDAEGQGDRDITYDSRLVSPVLLASKVVLFNWKDSLQADRILNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVDSTPEEVYRDLFQKEK-GRSDEVNVRNLARVNLIEAFESINIWLFPAPVENTANLRDKIRFEQLQRPFQDKLRELRKCLSSQLQKPMKF-YNRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAQALKESCEKDISAYCE 351
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A4D9D8U9_9STRA (GBP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8U9_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.220e-65 Identity = 123/293 (41.98%), Postives = 171/293 (58.36%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPK---------GVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPK---FGHLHVVFRDWNYSGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALI 843
IS QDPCTQGVD+SR VV F G + S + ++ F DVEGQGDRD+TYDA L ++ ++CV+FNW+DSLQ DR+LNLL VMQRAA NV T DG P+ FGHLH+VFRDW+Y GT E V LF +R + + +N++R + AF S+T+WL P PV+ T++L KEL DLS F Q+ LR L+ Q+ P F +TG + +LVP++V LN+G+ ++P SAY ++ E R++ +YL+K ++
Sbjct: 127 ISSSQDPCTQGVDISRKVVSWGAFHRRDGIALKEKPDRRSLANATSETAPKIAFVDVEGQGDRDLTYDANLVCPVVLTSRCVLFNWKDSLQRDRVLNLLAVMQRAAFNV------ATEEEGADGGPGGMPQSKIFGHLHIVFRDWSYQGTRESVYSTLFT-PERSLVADAVARNQIRSVLEGAFESITIWLLPPPVDRTTDLHKELRESDLSDGFKAQVQALRHVLAEQVKTPQHF-CGKILTGPKIAALVPSLVQTLNAGEQVLPRSAYANLIVSEISRVQISYLKKLQKVL 411
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A1W0A876_9STRA (GB1/RHD3-type G domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A876_9STRA) HSP 1 Score: 231 bits (590), Expect = 5.680e-65 Identity = 127/272 (46.69%), Postives = 169/272 (62.13%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPK-FGHLHVVFRDWNYSGTA-EEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMK 810
IS ++PCTQGVD+S VPL EFS +GC + S++ V F D EGQGDRD+TYD+RL S +L +K VIFNW+DSLQVDR+LNLL V+ +AA NV+L E N K FGHLH+VFRDWN+ T E+V LF +K G+ EV+ +N R + AF S+ +WLFP PV T++LS+ + E L F QL LR L+SQL EPM F +TG +L ++P + D+LN +IMPES Y M EA++++
Sbjct: 62 ISNEKEPCTQGVDLSSHFVPLTEFSRQNGCPPVQ----SKMMVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVIFNWKDSLQVDRMLNLLAVLAKAAQNVELAEG-------------ENRKVFGHLHIVFRDWNFINTTPEKVFDSLFKKEK-GVSSEVSTRNLARHELIDAFESIQIWLFPVPVVSTAQLSERIRFEQLQPSFQTQLRDLRKTLASQLKEPMPFN-QQALTGRTLSEMIPFVADILNENKVIMPESIYSSMRRAEAKKLQ 314
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A2P4XDC1_9STRA (Guanylate-binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDC1_9STRA) HSP 1 Score: 228 bits (581), Expect = 6.570e-65 Identity = 126/283 (44.52%), Postives = 172/283 (60.78%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
IS ++PCTQGVD+S VPL FS+ +GC + + + V F D EGQGDRD+TYD+RL S +L +K V+FNW+DSLQ DR+LNLL V+ RAA ++L D ++ V FGHLH+VFRDW++ + T EEV + LF +K G EV ++N R + AF S+ +WLFPAPV T+ L ++ E L F +L LR LSSQL +PM F P+T L ++PA+VD LNS +IMPES Y M+ EA+ K+ ++ A E
Sbjct: 81 ISNLREPCTQGVDLSGHFVPLSSFSSFNGCPSITPKASKGIHVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVLFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVNSTPEEVYRDLFQKEK-GRSEEVNVRNLARVNLIEAFESINIWLFPAPVANTANLRDKIRFEQLQKPFQNKLRELRKCLSSQLQQPMKF-YQRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAQAAKEHCEKEISAYCE 349
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: D0MZ80_PHYIT (GBP domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0MZ80_PHYIT) HSP 1 Score: 231 bits (589), Expect = 6.590e-65 Identity = 127/283 (44.88%), Postives = 174/283 (61.48%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
IS ++PCTQGVD+S VPL +FS+ +GC + + + V F D EGQGDRD+TYD+RL S +L +K VIFNW+DSLQ DR+LNLL V+ RAA ++L DG+++ FGHLH+VFRDW++ + T EEV + LF +K G EV ++N R + AF S+ +WLFPAPV T+ L ++ + L F +L LR LSSQL EPM F P+T L ++PA+VD LNS +IMPES Y M+ EA+ K+ ++ A E
Sbjct: 84 ISNLREPCTQGVDLSGHFVPLSKFSSFNGCPSLASKASKNIHVGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLARAAQGIEL----------PDGANTK--VFGHLHLVFRDWSFVNSTPEEVYRDLFQKEK-GRSEEVNVRNLARVNLIEAFESINIWLFPAPVANTANLRDKIRFDQLQKPFQGKLRELRKCLSSQLQEPMKF-YQRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAQAAKENCEKEISAYCE 352
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A024U7R7_9STRA (GBP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7R7_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.030e-64 Identity = 125/284 (44.01%), Postives = 171/284 (60.21%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSGTAE-EVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIET 849
IS ++PCTQGVD+S +PL FS ++GC VSGS + + F D EGQGDRD+TYD+RL S +L +K VIFNW+DSLQ DR+LNLL V+ +AA NV+L E FGHLH+VFRDWN+ T+ EV LF +K G+ EV+ +N R ++ AF S+ +WLFP PV T++LS+ + E L F +L LR+ +S QL EPM F P+TGH L ++P + LN +IMPES Y M E ++++ + E A +T
Sbjct: 70 ISNEKEPCTQGVDLSSHFMPLEAFSRINGCPP---VSGSNMSIGFVDAEGQGDRDITYDSRLVSPVLLSSKVVIFNWKDSLQADRMLNLLAVLAKAAQNVELAEG------------ETRKVFGHLHIVFRDWNFVNTSPTEVHDALFKKEK-GVSKEVSNRNLARHELSEAFESINIWLFPLPVVSTAQLSERIRFEQLQPSFQGKLRDLRNTISKQLQEPMLFN-QQPLTGHKLADMMPLFAESLNDNRVIMPESIYSSMRRAEGKKIQLSAEEAIRAYCKT 336
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A0N7L8F8_PLAHL (Guanylate-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8F8_PLAHL) HSP 1 Score: 230 bits (587), Expect = 1.290e-64 Identity = 126/283 (44.52%), Postives = 171/283 (60.42%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
IS ++PCTQGVD+S VPL FS +GC+A ++ + F D EGQGDRD+TYD+RL S +L +K V+FNW+DSLQ DR+LNLL V+ RAA ++L D ++ V FGHLH+VFRDW++ + T +EV + LF +K G EV ++N R + AF S+ +WLFPAPV T+ L ++ + L F +L LR LSSQL EPM F P+T L ++PA+VD LNS +IMPES Y M+ EAE K ++ A E
Sbjct: 83 ISNLREPCTQGVDLSSHFVPLSTFSGFNGCSAITSKKSKDIHIGFVDAEGQGDRDITYDSRLVSPVLLASKVVLFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVNSTPDEVYRDLFQKEK-GRSDEVNVRNLARVNLIEAFESINIWLFPAPVANTANLKDKIRFDQLQRPFQEKLRELRKCLSSQLQEPMKF-YQRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAEAAKTNCEKEISAYCE 351
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: M4B1N2_HYAAE (GBP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1N2_HYAAE) HSP 1 Score: 230 bits (586), Expect = 1.740e-64 Identity = 127/283 (44.88%), Postives = 173/283 (61.13%), Query Frame = 1
Query: 1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSG-TAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
IS ++PCTQGVD+S +VPL FS +GC + ++R+ F D EGQGDRD+TYD+RL S +L +K VIFNW+DSLQ DR+LNLL V+ RAA ++L D ++ V FGHLH+VFRDW++ G T EEV + LF +K G EV ++N R + AF S+ +WLFPAPV T+ L ++ + L F +L LR LSSQL PM F P+T L ++PA+VD LNS +IMPES Y M+ EA+ K++ ++ A E
Sbjct: 93 ISNLREPCTQGVDLSGHLVPLSSFSGFNGCPPVASRASKDIRIGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVGSTPEEVYRDLFQKEK-GRSEEVNVRNLARVNLIEAFESINIWLFPAPVANTANLKDKIRFDMLQKPFQDKLRELRKCLSSQLQHPMKF-YQRPLTAKYLMQIMPALVDTLNSDQVIMPESIYSSMVRAEAQAAKQSCEKEISAYCE 361 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46701.11770.1 >prot_H-elongata_contig46701.11770.1 ID=prot_H-elongata_contig46701.11770.1|Name=mRNA_H-elongata_contig46701.11770.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGback to top mRNA from alignment at H-elongata_contig46701:1..4027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46701.11770.1 ID=mRNA_H-elongata_contig46701.11770.1|Name=mRNA_H-elongata_contig46701.11770.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4027bp|location=Sequence derived from alignment at H-elongata_contig46701:1..4027- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46701:1..4027- >mRNA_H-elongata_contig46701.11770.1 ID=mRNA_H-elongata_contig46701.11770.1|Name=mRNA_H-elongata_contig46701.11770.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2004bp|location=Sequence derived from alignment at H-elongata_contig46701:1..4027- (Himanthalia elongata Himel1 dioecious)back to top |