mRNA_H-elongata_contig46701.11770.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46701.11770.1
Unique NamemRNA_H-elongata_contig46701.11770.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: D8LC12_ECTSI (GBP5, guanylate-binding protein (Divergent) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC12_ECTSI)

HSP 1 Score: 488 bits (1255), Expect = 1.100e-161
Identity = 251/335 (74.93%), Postives = 281/335 (83.88%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGS-EVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIETGMRACDNGPPVPPADMEVDMEEAMQQELLVGFECEAKEIGAKDEAVVEGRR 1002
            IS  +DPCTQGVDVSRAVVPL++F+T+ GCTAP+GVS S +VRV FADVEGQGDRD  YDARLASAILPLTKCVIFNWRDSLQVDR+LNLLGVMQRAAHNVDLG         DDG  +   KFGHLHVVFRDWNYSGTAE+VKKQLF LD RGMG EVA+KNELRRTITAAFASVTVWLFPAPVEMTSELSKEL SEDLS  F+ +L   RS LSSQL+ P  FG ANP+TGHSLGSLVPA+V+VLN G++IMP+S YQQMLD EA+++KKTYL KA+ALIETGM+ACDNGPPVPP D+E DME+ +Q  LL  FE EAK  GAK +AV EG +
Sbjct:   50 ISNDKDPCTQGVDVSRAVVPLKDFATLDGCTAPRGVSTSNQVRVLFADVEGQGDRDAAYDARLASAILPLTKCVIFNWRDSLQVDRMLNLLGVMQRAAHNVDLG---------DDGEGTGGSKFGHLHVVFRDWNYSGTAEDVKKQLFGLDNRGMGSEVAVKNELRRTITAAFASVTVWLFPAPVEMTSELSKELKSEDLSEGFVSELKAFRSTLSSQLSAPTVFGPANPVTGHSLGSLVPALVEVLNKGEVIMPQSTYQQMLDMEAQQVKKTYLSKANALIETGMKACDNGPPVPPKDLEADMEDEIQA-LLSDFESEAKTRGAKADAVAEGAK 374          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A5D6XRZ9_9STRA (GBP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRZ9_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.080e-65
Identity = 124/271 (45.76%), Postives = 170/271 (62.73%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMK 810
            IS  ++PCTQGVD++   +PL EFS +HG  + +   G ++ V F D EGQGDRD+TYD+RL S +L  +K VIFNW+DSLQ DR+LNLL V+ RAA  ++L          D  ++ V   FGHLH++FRDW++   T E+V K LFA +K G G E A++N  R  +  AF S+T+WLFPAPV  T+ LS ++  + L   F  +L  LR+ L+ QL  PM F    P+T   L  ++P +VD LNS  +IMPES Y  M+  EA  +K
Sbjct:   89 ISNLREPCTQGVDLAARFLPLAEFSALHGGASVRPAGGGQMLVGFVDAEGQGDRDITYDSRLVSPVLLASKTVIFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGDNAKV---FGHLHIIFRDWSFVDSTPEQVFKDLFAKEK-GRGEEAAVRNLARANLVDAFESITIWLFPAPVANTASLSDKIRFDQLQRPFQDKLRELRACLARQLQAPMRFN-QQPLTARLLTQVIPGLVDALNSDQVIMPESIYASMVRAEANAVK 345          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A6A3TSF2_9STRA (GBP domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TSF2_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.860e-65
Identity = 129/283 (45.58%), Postives = 176/283 (62.19%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
            IS  ++PCTQGVD+S  ++PL  FS ++GC    G +G+ + V F D EGQGDRD+TYD+RL S +L  +K V+FNW+DSLQ DRILNLL V+ RAA  ++L          D  ++ V   FGHLH+VFRDW++   T EEV + LF  +K G   EV ++N  R  +  AF S+ +WLFPAPVE T+ L  ++  E L   F  +L  LR  LSSQL +PM F    P+T   L  ++PA+VD LNS  +IMPES Y  M+  EA+ +K++  +   A  E
Sbjct:   84 ISNLREPCTQGVDLSAHLLPLSRFSGLNGCPPVTG-TGTGIHVGFVDAEGQGDRDITYDSRLVSPVLLASKVVLFNWKDSLQADRILNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVDSTPEEVYRDLFQKEK-GRSDEVNVRNLARVNLIEAFESINIWLFPAPVENTANLRDKIRFEQLQRPFQDKLRELRKCLSSQLQKPMKF-YNRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAQALKESCEKDISAYCE 351          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A4D9D8U9_9STRA (GBP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8U9_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.220e-65
Identity = 123/293 (41.98%), Postives = 171/293 (58.36%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPK---------GVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPK---FGHLHVVFRDWNYSGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALI 843
            IS  QDPCTQGVD+SR VV    F    G    +           S +  ++ F DVEGQGDRD+TYDA L   ++  ++CV+FNW+DSLQ DR+LNLL VMQRAA NV       T     DG     P+   FGHLH+VFRDW+Y GT E V   LF   +R +  +   +N++R  +  AF S+T+WL P PV+ T++L KEL   DLS  F  Q+  LR  L+ Q+  P  F     +TG  + +LVP++V  LN+G+ ++P SAY  ++  E  R++ +YL+K   ++
Sbjct:  127 ISSSQDPCTQGVDISRKVVSWGAFHRRDGIALKEKPDRRSLANATSETAPKIAFVDVEGQGDRDLTYDANLVCPVVLTSRCVLFNWKDSLQRDRVLNLLAVMQRAAFNV------ATEEEGADGGPGGMPQSKIFGHLHIVFRDWSYQGTRESVYSTLFT-PERSLVADAVARNQIRSVLEGAFESITIWLLPPPVDRTTDLHKELRESDLSDGFKAQVQALRHVLAEQVKTPQHF-CGKILTGPKIAALVPSLVQTLNAGEQVLPRSAYANLIVSEISRVQISYLKKLQKVL 411          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A1W0A876_9STRA (GB1/RHD3-type G domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A876_9STRA)

HSP 1 Score: 231 bits (590), Expect = 5.680e-65
Identity = 127/272 (46.69%), Postives = 169/272 (62.13%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPK-FGHLHVVFRDWNYSGTA-EEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMK 810
            IS  ++PCTQGVD+S   VPL EFS  +GC   +    S++ V F D EGQGDRD+TYD+RL S +L  +K VIFNW+DSLQVDR+LNLL V+ +AA NV+L E               N K FGHLH+VFRDWN+  T  E+V   LF  +K G+  EV+ +N  R  +  AF S+ +WLFP PV  T++LS+ +  E L   F  QL  LR  L+SQL EPM F     +TG +L  ++P + D+LN   +IMPES Y  M   EA++++
Sbjct:   62 ISNEKEPCTQGVDLSSHFVPLTEFSRQNGCPPVQ----SKMMVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVIFNWKDSLQVDRMLNLLAVLAKAAQNVELAEG-------------ENRKVFGHLHIVFRDWNFINTTPEKVFDSLFKKEK-GVSSEVSTRNLARHELIDAFESIQIWLFPVPVVSTAQLSERIRFEQLQPSFQTQLRDLRKTLASQLKEPMPFN-QQALTGRTLSEMIPFVADILNENKVIMPESIYSSMRRAEAKKLQ 314          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A2P4XDC1_9STRA (Guanylate-binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDC1_9STRA)

HSP 1 Score: 228 bits (581), Expect = 6.570e-65
Identity = 126/283 (44.52%), Postives = 172/283 (60.78%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
            IS  ++PCTQGVD+S   VPL  FS+ +GC +    +   + V F D EGQGDRD+TYD+RL S +L  +K V+FNW+DSLQ DR+LNLL V+ RAA  ++L          D  ++ V   FGHLH+VFRDW++ + T EEV + LF  +K G   EV ++N  R  +  AF S+ +WLFPAPV  T+ L  ++  E L   F  +L  LR  LSSQL +PM F    P+T   L  ++PA+VD LNS  +IMPES Y  M+  EA+  K+   ++  A  E
Sbjct:   81 ISNLREPCTQGVDLSGHFVPLSSFSSFNGCPSITPKASKGIHVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVLFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVNSTPEEVYRDLFQKEK-GRSEEVNVRNLARVNLIEAFESINIWLFPAPVANTANLRDKIRFEQLQKPFQNKLRELRKCLSSQLQQPMKF-YQRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAQAAKEHCEKEISAYCE 349          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: D0MZ80_PHYIT (GBP domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0MZ80_PHYIT)

HSP 1 Score: 231 bits (589), Expect = 6.590e-65
Identity = 127/283 (44.88%), Postives = 174/283 (61.48%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
            IS  ++PCTQGVD+S   VPL +FS+ +GC +    +   + V F D EGQGDRD+TYD+RL S +L  +K VIFNW+DSLQ DR+LNLL V+ RAA  ++L           DG+++    FGHLH+VFRDW++ + T EEV + LF  +K G   EV ++N  R  +  AF S+ +WLFPAPV  T+ L  ++  + L   F  +L  LR  LSSQL EPM F    P+T   L  ++PA+VD LNS  +IMPES Y  M+  EA+  K+   ++  A  E
Sbjct:   84 ISNLREPCTQGVDLSGHFVPLSKFSSFNGCPSLASKASKNIHVGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLARAAQGIEL----------PDGANTK--VFGHLHLVFRDWSFVNSTPEEVYRDLFQKEK-GRSEEVNVRNLARVNLIEAFESINIWLFPAPVANTANLRDKIRFDQLQKPFQGKLRELRKCLSSQLQEPMKF-YQRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAQAAKENCEKEISAYCE 352          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A024U7R7_9STRA (GBP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7R7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.030e-64
Identity = 125/284 (44.01%), Postives = 171/284 (60.21%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSGTAE-EVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIET 849
            IS  ++PCTQGVD+S   +PL  FS ++GC     VSGS + + F D EGQGDRD+TYD+RL S +L  +K VIFNW+DSLQ DR+LNLL V+ +AA NV+L E                  FGHLH+VFRDWN+  T+  EV   LF  +K G+  EV+ +N  R  ++ AF S+ +WLFP PV  T++LS+ +  E L   F  +L  LR+ +S QL EPM F    P+TGH L  ++P   + LN   +IMPES Y  M   E ++++ +  E   A  +T
Sbjct:   70 ISNEKEPCTQGVDLSSHFMPLEAFSRINGCPP---VSGSNMSIGFVDAEGQGDRDITYDSRLVSPVLLSSKVVIFNWKDSLQADRMLNLLAVLAKAAQNVELAEG------------ETRKVFGHLHIVFRDWNFVNTSPTEVHDALFKKEK-GVSKEVSNRNLARHELSEAFESINIWLFPLPVVSTAQLSERIRFEQLQPSFQGKLRDLRNTISKQLQEPMLFN-QQPLTGHKLADMMPLFAESLNDNRVIMPESIYSSMRRAEGKKIQLSAEEAIRAYCKT 336          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: A0A0N7L8F8_PLAHL (Guanylate-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L8F8_PLAHL)

HSP 1 Score: 230 bits (587), Expect = 1.290e-64
Identity = 126/283 (44.52%), Postives = 171/283 (60.42%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNY-SGTAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
            IS  ++PCTQGVD+S   VPL  FS  +GC+A       ++ + F D EGQGDRD+TYD+RL S +L  +K V+FNW+DSLQ DR+LNLL V+ RAA  ++L          D  ++ V   FGHLH+VFRDW++ + T +EV + LF  +K G   EV ++N  R  +  AF S+ +WLFPAPV  T+ L  ++  + L   F  +L  LR  LSSQL EPM F    P+T   L  ++PA+VD LNS  +IMPES Y  M+  EAE  K    ++  A  E
Sbjct:   83 ISNLREPCTQGVDLSSHFVPLSTFSGFNGCSAITSKKSKDIHIGFVDAEGQGDRDITYDSRLVSPVLLASKVVLFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVNSTPDEVYRDLFQKEK-GRSDEVNVRNLARVNLIEAFESINIWLFPAPVANTANLKDKIRFDQLQRPFQEKLRELRKCLSSQLQEPMKF-YQRPLTAKYLSQIMPALVDTLNSDQVIMPESIYSSMVRAEAEAAKTNCEKEISAYCE 351          
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Match: M4B1N2_HYAAE (GBP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1N2_HYAAE)

HSP 1 Score: 230 bits (586), Expect = 1.740e-64
Identity = 127/283 (44.88%), Postives = 173/283 (61.13%), Query Frame = 1
Query:    1 ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEGQGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNVDLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSG-TAEEVKKQLFALDKRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLSVEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGDIIMPESAYQQMLDKEAERMKKTYLEKADALIE 846
            IS  ++PCTQGVD+S  +VPL  FS  +GC      +  ++R+ F D EGQGDRD+TYD+RL S +L  +K VIFNW+DSLQ DR+LNLL V+ RAA  ++L          D  ++ V   FGHLH+VFRDW++ G T EEV + LF  +K G   EV ++N  R  +  AF S+ +WLFPAPV  T+ L  ++  + L   F  +L  LR  LSSQL  PM F    P+T   L  ++PA+VD LNS  +IMPES Y  M+  EA+  K++  ++  A  E
Sbjct:   93 ISNLREPCTQGVDLSGHLVPLSSFSGFNGCPPVASRASKDIRIGFVDAEGQGDRDITYDSRLVSPVLLASKVVIFNWKDSLQADRMLNLLAVLARAAQGIELA---------DGANTKV---FGHLHLVFRDWSFVGSTPEEVYRDLFQKEK-GRSEEVNVRNLARVNLIEAFESINIWLFPAPVANTANLKDKIRFDMLQKPFQDKLRELRKCLSSQLQHPMKF-YQRPLTAKYLMQIMPALVDTLNSDQVIMPESIYSSMVRAEAQAAKQSCEKEISAYCE 361          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46701.11770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC12_ECTSI1.100e-16174.93GBP5, guanylate-binding protein (Divergent) n=1 Ta... [more]
A0A5D6XRZ9_9STRA1.080e-6545.76GBP domain-containing protein n=1 Tax=Pythium bras... [more]
A0A6A3TSF2_9STRA2.860e-6545.58GBP domain-containing protein n=4 Tax=Phytophthora... [more]
A0A4D9D8U9_9STRA3.220e-6541.98GBP domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A1W0A876_9STRA5.680e-6546.69GB1/RHD3-type G domain-containing protein (Fragmen... [more]
A0A2P4XDC1_9STRA6.570e-6544.52Guanylate-binding protein n=1 Tax=Phytophthora pal... [more]
D0MZ80_PHYIT6.590e-6544.88GBP domain-containing protein n=14 Tax=Phytophthor... [more]
A0A024U7R7_9STRA1.030e-6444.01GBP domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A0N7L8F8_PLAHL1.290e-6444.52Guanylate-binding protein n=1 Tax=Plasmopara halst... [more]
M4B1N2_HYAAE1.740e-6444.88GBP domain-containing protein n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46701contigH-elongata_contig46701:1..4027 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score489.2
Seed ortholog evalue1.5e-135
Seed eggNOG ortholog2880.D8LC12
EggNOG free text desc.GTPase activity
EggNOG OGsKOG2037@1,KOG2037@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons9
Model size1002
Cds size1002
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930772.8386939-CDS-H-elongata_contig46701:0..781622930772.8386939-CDS-H-elongata_contig46701:0..78Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 1..78 -
1691679563.5676146-CDS-H-elongata_contig46701:0..781691679563.5676146-CDS-H-elongata_contig46701:0..78Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 1..78 -
1622930772.8538322-CDS-H-elongata_contig46701:407..5161622930772.8538322-CDS-H-elongata_contig46701:407..516Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 408..516 -
1691679563.5787754-CDS-H-elongata_contig46701:407..5161691679563.5787754-CDS-H-elongata_contig46701:407..516Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 408..516 -
1622930772.8680642-CDS-H-elongata_contig46701:841..9301622930772.8680642-CDS-H-elongata_contig46701:841..930Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 842..930 -
1691679563.5882933-CDS-H-elongata_contig46701:841..9301691679563.5882933-CDS-H-elongata_contig46701:841..930Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 842..930 -
1622930772.8820488-CDS-H-elongata_contig46701:1538..16611622930772.8820488-CDS-H-elongata_contig46701:1538..1661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 1539..1661 -
1691679563.6010573-CDS-H-elongata_contig46701:1538..16611691679563.6010573-CDS-H-elongata_contig46701:1538..1661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 1539..1661 -
1622930772.8942454-CDS-H-elongata_contig46701:1945..20411622930772.8942454-CDS-H-elongata_contig46701:1945..2041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 1946..2041 -
1691679563.610471-CDS-H-elongata_contig46701:1945..20411691679563.610471-CDS-H-elongata_contig46701:1945..2041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 1946..2041 -
1622930772.9051244-CDS-H-elongata_contig46701:2372..24561622930772.9051244-CDS-H-elongata_contig46701:2372..2456Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 2373..2456 -
1691679563.6189027-CDS-H-elongata_contig46701:2372..24561691679563.6189027-CDS-H-elongata_contig46701:2372..2456Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 2373..2456 -
1622930772.9167087-CDS-H-elongata_contig46701:2872..29611622930772.9167087-CDS-H-elongata_contig46701:2872..2961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 2873..2961 -
1691679563.640372-CDS-H-elongata_contig46701:2872..29611691679563.640372-CDS-H-elongata_contig46701:2872..2961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 2873..2961 -
1622930772.929393-CDS-H-elongata_contig46701:3368..35811622930772.929393-CDS-H-elongata_contig46701:3368..3581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 3369..3581 -
1691679563.6522603-CDS-H-elongata_contig46701:3368..35811691679563.6522603-CDS-H-elongata_contig46701:3368..3581Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 3369..3581 -
1622930772.9419296-CDS-H-elongata_contig46701:3906..40271622930772.9419296-CDS-H-elongata_contig46701:3906..4027Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 3907..4027 -
1691679563.6623948-CDS-H-elongata_contig46701:3906..40271691679563.6623948-CDS-H-elongata_contig46701:3906..4027Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46701 3907..4027 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46701.11770.1prot_H-elongata_contig46701.11770.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46701 1..4027 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46701.11770.1

>prot_H-elongata_contig46701.11770.1 ID=prot_H-elongata_contig46701.11770.1|Name=mRNA_H-elongata_contig46701.11770.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bp
ISLRQDPCTQGVDVSRAVVPLREFSTMHGCTAPKGVSGSEVRVCFADVEG
QGDRDVTYDARLASAILPLTKCVIFNWRDSLQVDRILNLLGVMQRAAHNV
DLGESLVTTSRCDDGSSSVNPKFGHLHVVFRDWNYSGTAEEVKKQLFALD
KRGMGVEVAMKNELRRTITAAFASVTVWLFPAPVEMTSELSKELNSEDLS
VEFMLQLAGLRSALSSQLAEPMGFGLANPITGHSLGSLVPAMVDVLNSGD
IIMPESAYQQMLDKEAERMKKTYLEKADALIETGMRACDNGPPVPPADME
VDMEEAMQQELLVGFECEAKEIGAKDEAVVEGRR
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mRNA from alignment at H-elongata_contig46701:1..4027-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46701.11770.1 ID=mRNA_H-elongata_contig46701.11770.1|Name=mRNA_H-elongata_contig46701.11770.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4027bp|location=Sequence derived from alignment at H-elongata_contig46701:1..4027- (Himanthalia elongata Himel1 dioecious)
ATCTCTCTGAGGCAGGACCCATGCACTCAAGGCGTTGATGTTTCCCGGGC CGTCGTGCCTCTACGGGAGTTCTCCACCATGCATGGGTGTACCGCTCCGA AGGGAGTGTCCGGCAGCGAAGGTCAGCACTGGACTGGGGTGGTGTTTCTA AAAATACACAGATTCTCCCAGCCGTGACCAATCGAGCCAGATCTCGTCTC TCGGCCTCTTTACCTCGTATCTGCATGTTTGTACCCTCAAGACTGTAAAT TATCTTGGCCCGGCGTTTCTTTCGTGCCATTCGTTTGATCACCACAGGCA AGCTTGATTCCAAAAATAAAACATGTCAGTCGGTCGCTCTCCCAACACCC CAATACACTCCGCTCCTATATCACCTAAAACCTTCTCGTCGCCCTCAATA TTTTTCTTGTGCAACGCGAAAATCTGGGACAAAACAACCACACCAGTGCG AGTGTGCTTCGCGGACGTGGAGGGGCAGGGTGACCGGGACGTGACGTACG ACGCAAGGCTTGCCTCGGCGATCCTGCCCCTTACCAAGTGCGTCATCTTT AACTGGAGAGACAGCCTGCAGGTCGACCGGATCCTCAACTTGCTGGGGGT GATGCAGCGGGCCGCTCACAACGTCGACCTCGGCGAGTCACTAGTGACCA CATCACGATGTCCCTTAGATTCAGTACGTCTAGCGTGCTTGTCCTGTGTT TTTTTCGGGCTGCATTGCCTTGTGCCGTGGTATTCCTCCGATCTCATCCC ACGAAGGACATTCTTTGTGGAATAATTTGTGGGAGAGAAATAGAAAAGGA AGAAGAAATAATGCGGGCAATAAAGGGTCGAAGTAGTGTTTACTTCCGGA GTATTAATAGAGAGATCCCCTCCTACGCGATAAAAAATAAATAAATAATA ATCCCTATGTCGAGGTGCGTTTTATTTTTGCTTTTGGTTGCCCAACGAGC GCCCCTGCCTTAGCGCCACGCTCCTTGTTGCTCGATTTCTGTCTTGAGGG TAAGGTATGGTGTTTTGGCGTTTCAGTCCGTAGAGTGAGAGTTGTTGATT TACTTCCTCCCAACAGGCGACGACGGCTCGAGCTCGGTGAATCCCAAGTT TGGTCACCTGCACGTGGTTTTCCGCGATTGGAACTACAGCGGCACCGCGG AAGAAGTGAGCTTTGAAAATATTTTCCGTCCGTCCCCCGTCCCAGTCCCC GACATGTTCTCTCTCTTTTCTCTTGTGTGTGTGTGTGTGTGTGTGTTTTG TTTTTTTTACCGGGAGCATCTCTTATCGAGACGCATCATCGATTTTCGTT CTACGTTGCGTGCCTAGGCAGATAAAAGTCGCTACAACAGTACACAGCAC TTAGGAGGCCTTGTCTTACCTGCGAAAATGCTGCTGTACAAAAACCATTA GCGCTCGGAGACCTAATCCGAGAGTTTGAAGAGACTTGCTCCTTGTTCTT TTTTTCTTAAGCGATATGCTCGTGTTTTTCCTCCAGCGTCGGGCATCATT CGGCGTTCTCTTGGCTGGGTTTGGGGCACCGTTCCTTCGCTCTTTATTTC TCTGGGGGTTTCATCGGACAGGTGAAAAAGCAGCTGTTCGCCCTCGACAA GAGGGGTATGGGGGTGGAAGTGGCCATGAAAAATGAGCTCAGGCGGACGA TCACGGTGGGCTGCGAGTGCGCACGCGTTGGTTTCGCTTTTCTTTGAAAA GCCTTCCCGACTAACCTCCCCTCTTCACCCACCCATCTAGTGGGAGCGAA AGATGAACATTTTTCTTACGGTCGATAAATGGTTGAATTGGTGCACCATT TTTCTCGAGATCTTACTGTTCCAATCTTTCTTCAACGCGGCTAGCAGCGC AACGTTCCAGTGCCTTGTGGCGCACGAGCAAGCATACGACCCCATTTTTT CTTCTATTTTCCTTTACTTTCCTTTCCCTGCGCTGGGACTGCGAGAGTCA ACGACCGATTGCGTGAGCATTGCTTGTCTATGTCAGGCTGCGTTCGCGAG CGTGACTGTGTGGCTTTTCCCGGCCCCGGTCGAGATGACCAGCGAACTCT CCAAGGAGCTCAATTCCGAAGATCTCAGCGTGGTGAGTCCGGGCGGTGGA GCACGCCTCAAGACAGCACCGTTTTTGTGCGCGTTAAGTCTTGGCCGCGC TGAAACTTCGTTGTAAAACCAGCCGTAGACTTTTCCGATGGAACATTGGA GTAGGGGCAAACACCAAGAACGTTTCATTCTGAACCACCGCGTGCTACAG GGATGTTTTGTATCTCATATCGGCCGCCCCTACCCCACCTCCGTGTTATT ATTTTTTGTGATAACGGGGTATGAGCGCCAGGACTTAGTTTGGATGTTTG TCGCCTTTTTTCGCAGGAATTTATGTTGCAACTTGCGGGGCTTCGGTCTG CGCTCTCTTCTCAGCTCGCCGAGCCAATGGGATTCGGGCTTGCCAATCCC ATCACAGGGCACTCTCTGGGGTCCTTGGTCCCTGCTATGGTGAGGCTGTT GATCGAATAGTATACGTCTGTTTTTTTGTGGCCAGTACCCCTACGCGCTT GGATGTTTTTGAGTGATTTCCCCAGTGCTGCGTTCGCTCCGTAGTAGTAG GTGTATTAGTAGATTTTTTGCCCTCGCGATTCAACAGCACCGGCCACCTT TCGCACATTTTCATAAAATTGGTTTCGCTATGCGTAGTAGTTCGGTCTTT AACCCTTTTACTGAGGTGTTGTTGCGTTTATTGAGCGAAAAAGTGGCGTA TAAAAAGGTAAGGTATACTCTGCTAGGTGGTGGGGGGAGGAGGGCATATC GCGGAGAGAGACCGCGGTCCTCCCCATAAGAGAGAAGGAGAGACACTGTC GCGCTGTACTTGGGCTGTATTATTTAACTTCGAGTTGTAAGCGTTACAAG TTACACCGCGGCGGTATGTGCACGCCTCCGCATGGTGAGCGTAAGCCTTA TCGTGGTCCGATATAGAAGCTGCCCTTGCGATCGTCGTGACTGTTCTCCA AGTACAATATTGTGTAGCACAAGACATTCTCATGTCGTGCCATACCCTCC ACCGTCGTTTGCCTTTTTTTTGTTCTATTCGGTGTGCTGCTCTGCAGGTA GACGTGCTGAACAGCGGCGACATCATAATGCCAGAAAGCGCGTATCAGCA GATGCTCGACAAAGAAGCCGAACGTATGAAGAAGACGTGAGAAAAATATT TATGTTTTCTTTTACGCGGGGGGGGTGTTGAGAGAGGTAGAAATGACGCG GTAAGCAACGGGGGCGTCGGAATCTCGCTGGTGACCAAAAACAAACGCTT GTCTTTGTGAAGTCGTGTTCGTGGACATTGCGATCTGTGCGCGCACGCCT TCTTAGAATGAAAACTCGTAGAACCCTTCCATTACCGGGCCCCGACAAGA GTCATTGCGGGCCTTGCACATTGCTTTAGAGGCTGGATATTTGTGTAAAA ATCCGGGGCGTTTCTTGTTTTGACCTCTGTTCTCTTTCCGACGCTTGCTC GCTTTCCTTAGGTACCTGGAGAAGGCTGACGCTCTGATCGAGACAGGGAT GAGGGCTTGCGACAACGGACCCCCCGTGCCGCCAGCTGATATGGAGGTCG ACATGGAGGAGGCGATGCAGGTCAGGGGTTCGTGCCATCGATGCCTATTT GCGTCGCGACTCATTACAATAATACCACTTCCCAGACGGTAACGCACCCA TACACCCAGACGCACGACACTACACGTAGACAAAAATACAAAATAAAATG TAGTGATTACGTACACGCGTACGTTGTCTGGGTCGGGGAGAAAATCTCCC GTGATGCGGCGTATTGATAGTCGTTAATCTTATTGGTTTCGCTCGCGAGA TTCCCCCCCCCCGCTCCCGCCTCAGTCAAGAATGACTTGAAGGGTTTTCA GTACAGTATGATCTCGGTCCCTAAAAAAGTATCAAATACGGGAAATGAGC AGGAGCTCTTGGTCGGCTTCGAGTGCGAGGCGAAGGAAATCGGAGCAAAG GACGAAGCTGTAGTCGAAGGGAGGCGA
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Coding sequence (CDS) from alignment at H-elongata_contig46701:1..4027-

>mRNA_H-elongata_contig46701.11770.1 ID=mRNA_H-elongata_contig46701.11770.1|Name=mRNA_H-elongata_contig46701.11770.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2004bp|location=Sequence derived from alignment at H-elongata_contig46701:1..4027- (Himanthalia elongata Himel1 dioecious)
ATCTCTCTGAGGCAGGACCCATGCACTCAAGGCGTTGATGTTTCCCGGGC
CGTCGTGCCTCTACGGGAGTTCTCCACCATGCATGGGTGTACCGCTCCGA
AGGGAGTGTCCGGCAGCGAAGATCTCTCTGAGGCAGGACCCATGCACTCA
AGGCGTTGATGTTTCCCGGGCCGTCGTGCCTCTACGGGAGTTCTCCACCA
TGCATGGGTGTACCGCTCCGAAGGGAGTGTCCGGCAGCGAAGTGCGAGTG
TGCTTCGCGGACGTGGAGGGGCAGGGTGACCGGGACGTGACGTACGACGC
AAGGCTTGCCTCGGCGATCCTGCCCCTTACCAAGTGCGTCATCTTTAACT
GGAGAGACAGCCTGCAGGTCGACCGGATCCTCAACTTGCTGGGGGTGATG
CAGCGGGCCGCTCACAACGTCGACCTCGGCGAGTCACTAGTGACCACATC
ACGATTGCGAGTGTGCTTCGCGGACGTGGAGGGGCAGGGTGACCGGGACG
TGACGTACGACGCAAGGCTTGCCTCGGCGATCCTGCCCCTTACCAAGTGC
GTCATCTTTAACTGGAGAGACAGCCTGCAGGTCGACCGGATCCTCAACTT
GCTGGGGGTGATGCAGCGGGCCGCTCACAACGTCGACCTCGGCGAGTCAC
TAGTGACCACATCACGATGCGACGACGGCTCGAGCTCGGTGAATCCCAAG
TTTGGTCACCTGCACGTGGTTTTCCGCGATTGGAACTACAGCGGCACCGC
GGAAGAAGCGACGACGGCTCGAGCTCGGTGAATCCCAAGTTTGGTCACCT
GCACGTGGTTTTCCGCGATTGGAACTACAGCGGCACCGCGGAAGAAGTGA
AAAAGCAGCTGTTCGCCCTCGACAAGAGGGGTATGGGGGTGGAAGTGGCC
ATGAAAAATGAGCTCAGGCGGACGATCACGGTGAAAAAGCAGCTGTTCGC
CCTCGACAAGAGGGGTATGGGGGTGGAAGTGGCCATGAAAAATGAGCTCA
GGCGGACGATCACGGCTGCGTTCGCGAGCGTGACTGTGTGGCTTTTCCCG
GCCCCGGTCGAGATGACCAGCGAACTCTCCAAGGAGCTCAATTCCGAAGA
TCTCAGCGTGGCTGCGTTCGCGAGCGTGACTGTGTGGCTTTTCCCGGCCC
CGGTCGAGATGACCAGCGAACTCTCCAAGGAGCTCAATTCCGAAGATCTC
AGCGTGGAATTTATGTTGCAACTTGCGGGGCTTCGGTCTGCGCTCTCTTC
TCAGCTCGCCGAGCCAATGGGATTCGGGCTTGCCAATCCCATCACAGGGC
ACTCTCTGGGGTCCTTGGTCCCTGCTATGGAATTTATGTTGCAACTTGCG
GGGCTTCGGTCTGCGCTCTCTTCTCAGCTCGCCGAGCCAATGGGATTCGG
GCTTGCCAATCCCATCACAGGGCACTCTCTGGGGTCCTTGGTCCCTGCTA
TGGTAGACGTGCTGAACAGCGGCGACATCATAATGCCAGAAAGCGCGTAT
CAGCAGATGCTCGACAAAGAAGCCGAACGTATGAAGAAGACGTAGACGTG
CTGAACAGCGGCGACATCATAATGCCAGAAAGCGCGTATCAGCAGATGCT
CGACAAAGAAGCCGAACGTATGAAGAAGACGTACCTGGAGAAGGCTGACG
CTCTGATCGAGACAGGGATGAGGGCTTGCGACAACGGACCCCCCGTGCCG
CCAGCTGATATGGAGGTCGACATGGAGGAGGCGATGCAGGTACCTGGAGA
AGGCTGACGCTCTGATCGAGACAGGGATGAGGGCTTGCGACAACGGACCC
CCCGTGCCGCCAGCTGATATGGAGGTCGACATGGAGGAGGCGATGCAGCA
GGAGCTCTTGGTCGGCTTCGAGTGCGAGGCGAAGGAAATCGGAGCAAAGG
ACGAAGCTGTAGTCGAAGGGAGGCGACAGGAGCTCTTGGTCGGCTTCGAG
TGCGAGGCGAAGGAAATCGGAGCAAAGGACGAAGCTGTAGTCGAAGGGAG
GCGA
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