mRNA_H-elongata_contig46527.11747.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5JDT4_9PHAE (MULE domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT4_9PHAE) HSP 1 Score: 273 bits (699), Expect = 3.870e-83 Identity = 137/253 (54.15%), Postives = 184/253 (72.73%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
Y H LA IVVVDKENHTQIAMQALL ER E+F+FL E F EL G+ P+VIFTD DQ+E SAIAQ +P +L+K C +H +N++ HG+GL G+L + +KF AAAYAPT + F++ K E L +L P+S +Y+YM +F+PGR KWA+ V P LHTL IASTQRVE TN A+K+++TR+G++ D++ A++G VQDDA +T RR+E G RV +S NMS A+ V+ +L F F+ A+ HE+CS +A E
Sbjct: 141 YNHKLAFIVVVDKENHTQIAMQALLDTERHESFVFLMESFKELIRGSSPKVIFTDTDQSEMSAIAQVFPGALNKLCYWHKEQNVKAHGKGLPGGILQGILRKFKAAAYAPTLEAFVEIKTELLSMLDPESGVYKYMLGEIFNPGRAGKWASFVHPGLHTLGIASTQRVEGTNCAVKKLVTRTGDLADLERALLGKVQDDAIRTQRRSEVGNTKRVSLSRNMSPAENVKQNLRGYFAFITAALTHERCSTHAKE 393
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5JXK5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK5_9PHAE) HSP 1 Score: 276 bits (706), Expect = 8.600e-83 Identity = 143/253 (56.52%), Postives = 183/253 (72.33%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
YK LALIVVVDKENHTQIAMQALL++ER+E+F F+FE F ELC G P V+FTD D A AIA YPS+L+K C++H ENIR HGRGL EGVL AV KF AAAYA T++ FLQ + E L +L P+SH+Y+YM N+F R KWA++V P LHTL IASTQRVES N+A+K V+TR G+M+D+++ I+ VQD KT RR+ GG+V++V + S+ RV +D FRF+ A+ HE+ S +AME
Sbjct: 356 YKFFLALIVVVDKENHTQIAMQALLANERSESFEFIFESFKELCGGGSPGVVFTDCDSAAMLAIANVYPSALNKLCIWHTMENIRDHGRGLAEGVLPAVLGKFKAAAYAQTQEYFLQLRGEILDMLPPESHMYKYMAVNIFGAERAGKWASYVHPGLHTLGIASTQRVESMNAAVKAVVTRKGSMMDLNDGIMAKVQDGMAKTERRSTGGKVNKVSMRQAKSAMSRVTTSHVDQFRFILDALAHEKSSTHAME 608
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5JB23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB23_9PHAE) HSP 1 Score: 263 bits (673), Expect = 6.720e-80 Identity = 136/253 (53.75%), Postives = 185/253 (73.12%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
YK LAL+VVVD ENH+QI MQALLS+ER E+F F++E ELC G P+V F+D D AET+AI +P ++HK C++H + NIR+HG GLGEGVL+ V +KF AA+A T + FLQ K E L L +S +Y YM N+F GRV+KWA+ V P LHTL I STQRVE+ NSA+KR++TRSG M++++ A++G VQDDANKT R+++GGR+ R +S+ MSS + V+ LL +F FV A+ HE+ S +A++
Sbjct: 265 YKFSLALVVVVDHENHSQIVMQALLSNERQESFQFVYESLKELCEGGSPKVCFSDNDAAETNAIELVFPGTVHKLCIWHTYGNIREHGGGLGEGVLSEVIRKFRKAAFAQTVEYFLQAKTELLAFLPRESKMYNYMANNIFGKGRVEKWASCVHPGLHTLGICSTQRVEAMNSAVKRLVTRSGTMVELNRALMGKVQDDANKTKRKSDGGRLPRAPLSS-MSSMENVKRGLLKHFSFVVDAVKHERSSTHAIK 516
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: D7G8C7_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C7_ECTSI) HSP 1 Score: 258 bits (659), Expect = 1.640e-78 Identity = 144/276 (52.17%), Postives = 182/276 (65.94%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPG-----------------------RVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
YK HLALIVVVDKENH+QIAMQALLS ER+E+F F+FE F +LC G P+V+FTD D A AIA+ YPS+L+K C++H NIR+HG GL +GVL V Q F AAAYA TE+ FLQ K L LL P+S +YEYM+KN+F G R KWA++V P LHTL IASTQRVES N+A+K+++TR G+M+D+ A++G VQDD N+T RR GG V RV V + S + + L F FV A+ +EQCS +A E
Sbjct: 80 YKFHLALIVVVDKENHSQIAMQALLSDERSESFEFVFESFKQLCEGGTPEVVFTDCDAAAMLAIAKVYPSALNKLCIWHTMGNIREHGGGLEKGVLGQVLQLFKAAAYAQTEEYFLQCKGALLDLLPPESKMYEYMEKNIFGTGFRQLVTSSVSCPLSLSRPVTCDRRAGKWASYVHPGLHTLGIASTQRVESMNAAVKKLVTRKGDMVDLGRALLGKVQDDINRTQRRNLGGTVARVAVQGH-SYVESFRTKHLRTFNFVLNAVKYEQCSQHATE 354
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE) HSP 1 Score: 255 bits (651), Expect = 2.220e-78 Identity = 136/253 (53.75%), Postives = 181/253 (71.54%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
YK LALIVVVD EN+TQIAMQALLS+ER+E+F+FL E F ELC G PQV FTD DQ AIA+ +P +L+K C+++ +NIRKHG+GL +G L +V Q F AAA+A + F++YK E RLL +S +++YM+ +F GRV+KWA+ V P LH L IASTQR E+T +ALK V+TR+GNM+D++ A++ VQDDA KT R +GG V RV V +S + V+A L +F FV +AM HE+CS +A E
Sbjct: 43 YKFFLALIVVVDMENYTQIAMQALLSNERSEDFIFLMETFKELCGGLMPQVAFTDCDQGAMGAIAEVFPGALNKLCIWYAMQNIRKHGKGLADGALQSVLQNFKAAAFAARVEDFVRYKTELPRLLPQESAMHKYMEGTIFGAGRVEKWASCVHPGLHKLGIASTQRCEATFTALKLVVTRNGNMVDLNRALLSKVQDDAIKTQSRNKGGAVTRVPVRK-VSPQESVKASFLRHFSFVFEAMEHERCSRHAKE 294
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5K1S8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S8_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.580e-68 Identity = 128/233 (54.94%), Postives = 158/233 (67.81%), Query Frame = 1
Query: 61 MQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
MQALLS ERTE+F FLF F L GA P+VIFTD D A + I + P+S K C++H+ EN+RKHG+GLGEGVLAAV F+ AAY+ TE+MFLQ K E +LL P H+Y Y+ + +F P VQ+WA +V P L TL I+STQRVESTN ALK MTR+G M+DV AI G V DD NKT +T GG + RVRV SS V+ L +F+FV MLH CSA+AM+
Sbjct: 1 MQALLSSERTEDFEFLFREFRSLIGGAQPEVIFTDNDAAAMAGIEKESPASRGKVCVFHMDENLRKHGKGLGEGVLAAVIGLFHKAAYSQTEEMFLQRKEELFKLLDPGRHMYTYITECVFSPKWVQRWAKYVHPGLPTLGISSTQRVESTNGALKPAMTRTGTMVDVHRAISGKVSDDVNKTKTQTTGGPIQRVRVPT-QSSFGDVRDSWLADFKFVHDGMLHAGCSAFAMK 232
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5KJW1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW1_9PHAE) HSP 1 Score: 219 bits (557), Expect = 9.730e-67 Identity = 112/188 (59.57%), Postives = 140/188 (74.47%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDV 564
YK+HLALIVVVDKEN+TQIAMQALL++ERTE+F FLF +F ELC G P+ T AI + P+S K CL+H+ EN+ KHG GL +GVLA V+ F+AAAYA TE+MFL++KA + L PDSH+Y+YM +F+P RVQ+WA+ V P LHTL+I STQRVESTN ALK M RSG+M+DV
Sbjct: 147 YKYHLALIVVVDKENYTQIAMQALLANERTEDFKFLFRVFRELCEGVQPEAAMT--------AIDEECPASHQKLCLFHMDENLMKHGEGLEQGVLAGVKGMFHAAAYAHTEEMFLKHKANLFKQLKPDSHMYKYMADFVFEPRRVQRWASFVHPGLHTLNIVSTQRVESTNGALKTAMHRSGSMVDV 326
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5JIP1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP1_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.030e-65 Identity = 107/216 (49.54%), Postives = 146/216 (67.59%), Query Frame = 1
Query: 112 EMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTARRTEGGRVDRVRVSNNMSSAQRVQAHLLDNFRFVEQAMLHEQCSAYAME 759
E F +L G+ PQVIFTD DQ+E SAIAQ +P +L+K C +H +N+++HG+GL + V+ V +KF AAAYAPT F + K E L +L P+S +Y+YM ++F PGR +WAA V P LHTL IASTQRVES N A K+++TR+G++ D+D AIVG V D K RR+EGG RV +S + S A+ ++ + F F+ AM HE+CS A E
Sbjct: 2 ESFKKLIRGSSPQVIFTDTDQSEMSAIAQVFPGALNKLCYWHTEQNVKEHGKGLPQAVIQGVLRKFKAAAYAPTVGTFFEAKTELLAMLDPESRMYKYMAGDIFSPGRAGRWAAFVHPGLHTLGIASTQRVESMNCAFKKLVTRTGDLFDLDRAIVGKVSDGKIKAERRSEGGNTPRVPISRHKSPAEVMKEKIRGYFSFIPAAMAHERCSTNAKE 217
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5JZ35_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ35_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.340e-63 Identity = 110/205 (53.66%), Postives = 144/205 (70.24%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKTAR 615
Y H LA IVVVDKEN TQ AMQALL ER E+FL L E F +L G+ P+VIFTD Q+E SAIAQ +P +L+K C +H+ +N+++HG+GL EGV+ V +KF AAA+APT ++ K E L +L P+S + +Y ++F PGR +WAA V P LHTL IASTQRVES N A K+++TR+G++ D+D AIVG V D K R
Sbjct: 201 YNHKLAFIVVVDKENLTQNAMQALLETERHESFLSLMESFKKLIRGSSPRVIFTDTGQSEMSAIAQVFPGALNKLCYWHMEQNVKEHGKGLPEGVIQGVLRKFKAAAFAPTVGALVEAKTELLAMLDPESTMNKYTAGDIFSPGRAGRWAAFVHPGLHTLGIASTQRVESMNCAFKKLVTRTGDLFDLDRAIVGKVSDGKIKAER 405
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.900e-62 Identity = 119/203 (58.62%), Postives = 141/203 (69.46%), Query Frame = 1
Query: 1 YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQVIFTDADQAETSAIAQTYPSSLHKFCLYHIHENIRKHGRGLGEGVLAAVQQKFNAAAYAPTEDMFLQYKAEALRLLTPDSHIYEYMDKNMFDPGRVQKWAAHVQPRLHTLSIASTQRVESTNSALKRVMTRSGNMIDVDNAIVGHVQDDANKT 609
YK+HLALIVVVDKEN+T I QALL+ ERTE+F FLF F E+ GA PQVIFTDAD A +AI + P S H+ CL+H+ EN+RKHG+GLGEGVLA V + F+ AA+APTE+ K + LL P S +Y YM ++F P V +WA P L TL I STQRVESTNSALK M RSG M+DV AI VQ DANKT
Sbjct: 225 YKYHLALIVVVDKENYTHIVFQALLASERTEDFDFLFRAFREMIGGAQPQVIFTDADAAAMAAIQKECPWSRHQLCLFHLDENLRKHGKGLGEGVLAGVIRMFHKAAFAPTEEA----KQDVFNLLAPGSDMYTYMADSVFGPKWVHRWAKFGHPGLPTLGITSTQRVESTNSALKPAMQRSGTMVDVHRAISKKVQSDANKT 423 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46527.11747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46527.11747.1 >prot_H-elongata_contig46527.11747.1 ID=prot_H-elongata_contig46527.11747.1|Name=mRNA_H-elongata_contig46527.11747.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp YKHHLALIVVVDKENHTQIAMQALLSHERTENFLFLFEMFTELCAGAHPQback to top mRNA from alignment at H-elongata_contig46527:1882..3689- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46527.11747.1 ID=mRNA_H-elongata_contig46527.11747.1|Name=mRNA_H-elongata_contig46527.11747.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1808bp|location=Sequence derived from alignment at H-elongata_contig46527:1882..3689- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46527:1882..3689- >mRNA_H-elongata_contig46527.11747.1 ID=mRNA_H-elongata_contig46527.11747.1|Name=mRNA_H-elongata_contig46527.11747.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1518bp|location=Sequence derived from alignment at H-elongata_contig46527:1882..3689- (Himanthalia elongata Himel1 dioecious)back to top |