mRNA_H-elongata_contig4648.11743.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig4648.11743.1
Unique NamemRNA_H-elongata_contig4648.11743.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: D8LTY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY5_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 6.090e-66
Identity = 230/668 (34.43%), Postives = 288/668 (43.11%), Query Frame = 1
Query:    1 GVRVREPHSHSIWREPD--SEIVRQGEREG-IPLRVALKGERTDNFSLSVESCFV-GDNSHRAGCTTAGVSAAGDVRSFWSP---VVLDLSTGKAKGSISVLSSCKARKVRVAAVNAGEEIVGVKSTEAATGMKRAANGSGG------GEDN-------------EEIYLLIAFTPEWTARFNRPILPLESLLLRVVGSYVEYPP----ACGENEGNASRCCQPLKNMRGHARRRESWAARDYSYNVRRLLFAV--------HDCYPR--RGSKGSITNSGPQWALGEAHIDSAAVPATVEPEIGREPKSERNPGKVGQQCSAREI---LELVPSSRLLSESAKEQLTTAPAAYTSSTRSGINYKRTN-LSSISNPCPEASG---------ANGIIELSVVESADLGGYFGTVWDCSLALGAFVASLGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRRHKGCRSVEVEEYTWGSPTRDRQALARG-RFDVIICSDLF--------------------------------------------CSSVIYLAHRTRNVQEREFFSSLEG---------------------------FRCRKEVFVGEGVSEREDTGHCTNIEGEDFWNQTRWQRGCFPDVLLYELTPI 1629
            GVRV+ PHS+ +W EP   S   R G   G +PLRV L+GER   F L V S    GD     G      S+  D     +P   + LDLSTG A G ++VL S +  + R       E+   V +  A                   GE+N              E+ L I+ +P W  RFNRP+LPLESL      + V  PP    A G     A+    P   + G  ++R +   R  + NVRRL F V         D   R  R  +    NSG ++   EA        ATVE        + ++ G     C    I   L   PS      S+   L+++P    ++         T+ LSS                    NGIIE+   ESA LGG+FGTVWDCSL +GAF+A+LGP S+EGKRVVELGA  G +SA+CA LGA EVVATDT DLLPLL  N+ R      G  +VE  EY WGSP     AL+RG  FDV+ICSDL                                               +V+YLAHRTRN QE EFF +L G                           FRCR+     EGV    D G C   EG        W+ GCFPDV LYEL+P+
Sbjct:   54 GVRVQHPHSYHVWAEPQPSSSSARDGLATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGGADRHDDSSHADQGRQCAPFKGLTLDLSTGTAHGWVAVLPSSRPTEPRTPPDLDHEDSTPVCACPAVAAQXXXXXXXXXXXXXXXGEENGCKPEGEEGVVAGAEVQLSISLSPAWARRFNRPVLPLESL-----PALVHSPPYHVAAVGATPTVATPT-PPTGRLEGEGQKR-AVIGRSGACNVRRLRFEVGVARGGGDRDTGRRTIREEEKREENSGSKFTANEAEG------ATVEDSHLAGAPARKHKG----DCCGGPINISLPPPPSPPTTPASSWPSLSSSPVGNAATVSGSDGDGATSGLSSCXXXXXXXXXXXXXXXXERGNGIIEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNS--CPGSLNVEACEYDWGSPVGHHPALSRGVGFDVVICSDLLYDPAGWEPLLESLRQLLAAAGGRQRQPARGRGAXXXXXSPTPPSAPAVVYLAHRTRNPQESEFFDALLGQEGGRGPAAEASRRGGPPEGGEEGVLSFRCRR--LSEEGVGGCHDEG-CRGGEG------LVWRGGCFPDVALYELSPV 693          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: A0A6H5JS56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS56_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 4.240e-58
Identity = 219/677 (32.35%), Postives = 279/677 (41.21%), Query Frame = 1
Query:    4 VRVREPHSHSIWREPD--SEIVRQGEREGI-PLRVALKGERTDNFSLSVESCFVGDNSHRAG--CTTAGVSAAGDVRSFWSP----------VVLDLSTGKAKGSISVLSSCKARKVRVAAVNAGEEIVGVKSTEAATGMKRAA-------------------NGSGGGEDNEEIYLLIAFTPEWTARFNRPILPLESLLLRVVGSYVEYPPACGENEGNASRCCQPLKNMRGHARRRESWAARDYSYNVRRLLFAVHDCYPRRGSKGSITNSGP------QWALGEAHIDSAAVPATVEPEIGREPKSERNPGKVGQQCSAREI-LELVPSSRLLSESAKEQLTTAPAAYTSSTRSGINYKRTN--LSSISNPCP--------------------EASGANGIIELSVVESADLGGYFGTVWDCSLALGAFVASLGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRRHKGCRSVEVEEYTWGSPTRDRQALARGR-FDVIICSDLFCS--------------------------------------------SVIYLAHRTRNVQEREFFSSLEG---------------------------FRCRKEVFVGEGVSEREDTGHCTNIEGEDFWNQTRWQRGCFPDVLLYELTPI 1629
            + +  PHSH +W EP+  S     G   G+ PLRV L+GER + F L V S         AG  C  AG  A   V S  +           + LDLSTG A G ++VL + +  + R       ++   V +  A                            G  G     E+ L I+ +P W  RFNRP+LPLESL    V     +  A G     A+    P   + G  +RR     RD + NVRRL F V     R G         P      +   G     + A  ATVE     E  S ++ G  G     R   L   PS       ++  L+++P    +   SG  +      LSS S                        +    N I+E+   ESA LGG+FGTVWDCSL +GAF+A+LGP S+EGKRVVELGA  G +SA+CA LGA EVVATDT DLLPLL  N+ R      G  +VE  EY WGSP     AL++G  FDV++CSDL                                               +V+YLAHRTRN QE EFF  L G                           FRCR+     E V    D G C   EG        W+ GCFPD+ LYEL+P+
Sbjct:    1 MNIPHPHSHHVWAEPEPSSSSAHDGLAAGVVPLRVTLEGERANRFLLDVSSSIEEGECVGAGGSCGEAGGGADRHVDSSHADQGRQCAPSKGLTLDLSTGMAHGWVAVLPASRPTEPRTPPDLDHDDSTPVCACPAVAAXXXXXXXXXXXXXXXXGEENGCEPEGEDGVVAGAEVQLSISLSPAWVRRFNRPVLPLESLPA-FVHDPAYHVAAVGATPTVATPT-PPTGRLEGEGQRRAVIGRRD-ACNVRRLRFEVG--VARGGGDRDTGRRTPGEEERREEKSGSKFTPNEAEGATVEDSHLAEAPSRKHKG--GYCRGPRNTSLPPPPSPPATPAWSRPSLSSSPVG-NAPAMSGSEWDGATGGLSSCSAXXXXXXXXXXXXXXXXXXXXXXNDDKHGNKIVEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPGSLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNS--CPGSVNVEACEYDWGSPVGHHLALSQGGGFDVVLCSDLLYDPAGWEPLLESLRQLLAAAGERQRQPTRRXXXXXXXXXXXXXXXXAVVYLAHRTRNPQESEFFDVLLGQEGGRGPAAEASQRGGPREGCEEGVLSFRCRR--LSDEWVGGCHDEG-CRGGEG------LVWRGGCFPDIALYELSPV 658          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: A0A813B9D6_SYMMI (Vcpkmt protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B9D6_SYMMI)

HSP 1 Score: 82.8 bits (203), Expect = 1.730e-13
Identity = 69/213 (32.39%), Postives = 98/213 (46.01%), Query Frame = 1
Query: 1063 GYFGTVWDCSLALGAFVASLGPRS-MEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRRHKGCRSVEVEEYTWGSPTRDRQALARGRFDVIICSDLFC--------------------SSVIYLAHRTRNVQEREFFSSLEGFRCRKEVFVGEGVSEREDTGHCTNIEGEDFWNQTRWQRGCFPDVLLYELTPIVSA 1638
            G  G VWD  L L  ++A    R  +EG+RV+ELG+G G+V   CA LGA+EV+ TD  D+  LL  N+   + R  G   V+V+ + WG+   D  AL     +V+I +DL                      S    LA R RN+++ +FF                    RE +GH    + EDF  + R    C+ D+ L ELTP  +A
Sbjct:  163 GIGGGVWDGGLVLLEYLAHPAQRPRLEGRRVLELGSGTGLVGLGCALLGAQEVLLTDLPDVTSLLDFNVALNRARRSGLERVQVQAHEWGT---DVAALEPAALEVVIMADLIYDVEPSKQLIVSIATLAAANPSICFLLAFRPRNIEDPDFF--------------------RELSGHFRIDQAEDFGGELRAL--CY-DLQLLELTPRSAA 349          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: A0A812I6H3_9DINO (Vcpkmt protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812I6H3_9DINO)

HSP 1 Score: 73.9 bits (180), Expect = 1.390e-11
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 1063 GYFGTVWDCSLALGAFVASLGPRS-MEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRRHKGCRSVEVEEYTWGSPTRDRQALARGRFDVIICSDL 1395
            G  G VWD  L L  ++A    R+ +EG+RV+ELG+G G+V   CA LGA+EV+ TD  D+  LL  N+   + R  G   V+V+ + WG+   D  AL     +V+I +DL
Sbjct:   68 GIGGGVWDGGLVLLEYLAHPAQRTRLEGRRVLELGSGTGLVGLGCALLGAQEVLLTDLPDVTALLDFNVALNRARRSGLERVQVQAHEWGT---DVAALEPAALEVVIMADL 176          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: A0A1V9YJ95_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ95_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.820e-11
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query: 1072 GTVWDCSLALGAFVASLGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRRHKGCRSVEVEEYTWGSPTRDRQALARGRFDVIICSDLFCSSVIYLAHRTRNVQE 1446
            GTVWD  + L  ++ SLG  +++GKR++ELGAG  + S V A LGA  VVATD +D+LP     ++      K  R++E EE  WG      +ALA+   D I+ +D     V+Y A     +QE
Sbjct:   41 GTVWDAGVVLSHYLDSLGSAALQGKRIIELGAGTALPSIVSARLGAV-VVATDMSDVLPYTIAAIDG-NCSPKTRRAIEAEELIWGIHGIGLKALAQEHCDFIVAAD-----VVYNAKHFAELQE 158          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: A0A8K0MRI9_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0MRI9_9ROSA)

HSP 1 Score: 72.4 bits (176), Expect = 2.870e-10
Identity = 50/120 (41.67%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 1075 TVWDCSLALGAFVAS------LGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRR-------HKGCRSVEVEEYTWGSPTRDRQALARGRFDVIICSDL 1395
            TVWD SL    F+          P  ++GKRV+ELGAGCGV     A LG  +VVATD  ++LPLLR N+ER   R            SV+VEE +WG+   D        FD II +D+
Sbjct:   24 TVWDASLVFAKFLEKNCRRGRFSPSKLKGKRVIELGAGCGVAGFGMALLGC-DVVATDQIEVLPLLRRNVERNSSRIVQMNPGSDSFGSVQVEELSWGN--EDHIRAVGPPFDYIIGTDV 140          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: A0A7S0NIN9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0NIN9_MICPS)

HSP 1 Score: 72.4 bits (176), Expect = 3.400e-10
Identity = 52/118 (44.07%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 1060 GGYFGTVWDCSLALGAFVASLGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERI------QRRHKGCRSVEVEEYTWGSPTRDRQALARGR-FDVIICSD 1392
            GG+  TVWD S+ L  +V      S   K+V ELGAGCGVVSA     G   VVATD  + LPLLR NMER        +  +G R  EV+  TWG+      A+A G  FDV++ +D
Sbjct:  114 GGFASTVWDSSIVLAKYVEKR-RGSFANKKVCELGAGCGVVSAALVKAGCARVVATDLPENLPLLRENMERNCGGGENGQGGEGTR-WEVKALTWGADA----AVALGETFDVVVAAD 225          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: C1FI77_MICCC (FCP1 homology domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FI77_MICCC)

HSP 1 Score: 73.9 bits (180), Expect = 4.230e-10
Identity = 53/116 (45.69%), Postives = 64/116 (55.17%), Query Frame = 1
Query: 1060 GGYFGTVWDCSLALGAFVASLGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRRH----KGCRSVEVEEYTWGSPTRDRQALARGR-FDVIICSD 1392
            GG+  TVWD S+ L  +V      S   KRV ELGAGCGVVSA     G   VVATD  + LPLLR NMER    +    +G R  EV+  TWG       A+A G  FDV++ +D
Sbjct:  504 GGFASTVWDSSIVLAKYVEKH-RGSFANKRVCELGAGCGVVSAALVKAGCARVVATDLPENLPLLRENMERNCGENGENGEGAR-WEVKALTWGPDA----AVALGETFDVVVAAD 613          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: I3STE9_LOTJA (Uncharacterized protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3STE9_LOTJA)

HSP 1 Score: 71.6 bits (174), Expect = 4.350e-10
Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 1075 TVWDCSLALGAFV------ASLGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMER-----IQRRHKGCRSVEVEEYTWGSPTRDRQALARGRFDVIICSDLFCSSVIYLAH 1425
            TVWD SL L  F+          P  ++GKRV+ELGAGCGV     A LG  +VV TD  ++LPLL+ N+ER     +Q+  +   S++V E  WG  +  +       FD II +D     V+Y+ H
Sbjct:   37 TVWDASLVLAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGFGMALLGC-DVVVTDQKEVLPLLQRNVERNVSRVMQKSPESFGSIKVSELQWGDDSHIKAV--DPPFDYIIGTD-----VVYVEH 156          
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Match: B9SCI5_RICCO (Uncharacterized protein n=4 Tax=Ricinus communis TaxID=3988 RepID=B9SCI5_RICCO)

HSP 1 Score: 72.0 bits (175), Expect = 4.520e-10
Identity = 51/130 (39.23%), Postives = 65/130 (50.00%), Query Frame = 1
Query: 1075 TVWDCSLALGAFVAS------LGPRSMEGKRVVELGAGCGVVSAVCATLGAKEVVATDTNDLLPLLRLNMERIQRR-------HKGCRSVEVEEYTWGSPTRDRQALARGRFDVIICSDLFCSSVIYLAH 1425
            TVWD S+    F+          P  ++GKRV+ELGAGCGV     A LG  +VVATD  ++LPLL  N+ER   R           RS++VEE  WG+   D        FD II +D     V+Y  H
Sbjct:   37 TVWDASMVFAKFLEKNCRKGRFSPSKLKGKRVIELGAGCGVAGFGMALLGC-DVVATDQKEVLPLLMRNVERNTSRIMQMDTNSVSFRSIKVEELDWGN--EDHIRAVDPPFDYIIGTD-----VVYTEH 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4648.11743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTY5_ECTSI6.090e-6634.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS56_9PHAE4.240e-5832.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A813B9D6_SYMMI1.730e-1332.39Vcpkmt protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A812I6H3_9DINO1.390e-1140.18Vcpkmt protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A1V9YJ95_9STRA2.820e-1139.20Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K0MRI9_9ROSA2.870e-1041.67Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A7S0NIN9_MICPS3.400e-1044.07Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
C1FI77_MICCC4.230e-1045.69FCP1 homology domain-containing protein n=1 Tax=Mi... [more]
I3STE9_LOTJA4.350e-1038.28Uncharacterized protein n=1 Tax=Lotus japonicus Ta... [more]
B9SCI5_RICCO4.520e-1039.23Uncharacterized protein n=4 Tax=Ricinus communis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4648contigH-elongata_contig4648:1986..4651 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.9
Seed ortholog evalue2.3e-62
Seed eggNOG ortholog2880.D8LTY5
EggNOG free text desc.peptidase activity, acting on L-amino acid peptides
EggNOG OGsCOG3897@1,KOG2920@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNicotinamide N-methyltransferase-like
Ec32 orthologEc-12_003880.1
Exons5
Model size1707
Cds size1707
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4648.11743.1prot_H-elongata_contig4648.11743.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig4648 1986..4651 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930769.8913407-CDS-H-elongata_contig4648:1985..22191622930769.8913407-CDS-H-elongata_contig4648:1985..2219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 1986..2219 +
1691679562.1639242-CDS-H-elongata_contig4648:1985..22191691679562.1639242-CDS-H-elongata_contig4648:1985..2219Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 1986..2219 +
1622930769.9148397-CDS-H-elongata_contig4648:2437..28231622930769.9148397-CDS-H-elongata_contig4648:2437..2823Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 2438..2823 +
1691679562.185912-CDS-H-elongata_contig4648:2437..28231691679562.185912-CDS-H-elongata_contig4648:2437..2823Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 2438..2823 +
1622930769.9264605-CDS-H-elongata_contig4648:3109..37971622930769.9264605-CDS-H-elongata_contig4648:3109..3797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 3110..3797 +
1691679562.19709-CDS-H-elongata_contig4648:3109..37971691679562.19709-CDS-H-elongata_contig4648:3109..3797Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 3110..3797 +
1622930769.942967-CDS-H-elongata_contig4648:4195..42861622930769.942967-CDS-H-elongata_contig4648:4195..4286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 4196..4286 +
1691679562.2069485-CDS-H-elongata_contig4648:4195..42861691679562.2069485-CDS-H-elongata_contig4648:4195..4286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 4196..4286 +
1622930769.961313-CDS-H-elongata_contig4648:4343..46511622930769.961313-CDS-H-elongata_contig4648:4343..4651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 4344..4651 +
1691679562.217442-CDS-H-elongata_contig4648:4343..46511691679562.217442-CDS-H-elongata_contig4648:4343..4651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig4648 4344..4651 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig4648.11743.1

>prot_H-elongata_contig4648.11743.1 ID=prot_H-elongata_contig4648.11743.1|Name=mRNA_H-elongata_contig4648.11743.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=569bp
GVRVREPHSHSIWREPDSEIVRQGEREGIPLRVALKGERTDNFSLSVESC
FVGDNSHRAGCTTAGVSAAGDVRSFWSPVVLDLSTGKAKGSISVLSSCKA
RKVRVAAVNAGEEIVGVKSTEAATGMKRAANGSGGGEDNEEIYLLIAFTP
EWTARFNRPILPLESLLLRVVGSYVEYPPACGENEGNASRCCQPLKNMRG
HARRRESWAARDYSYNVRRLLFAVHDCYPRRGSKGSITNSGPQWALGEAH
IDSAAVPATVEPEIGREPKSERNPGKVGQQCSAREILELVPSSRLLSESA
KEQLTTAPAAYTSSTRSGINYKRTNLSSISNPCPEASGANGIIELSVVES
ADLGGYFGTVWDCSLALGAFVASLGPRSMEGKRVVELGAGCGVVSAVCAT
LGAKEVVATDTNDLLPLLRLNMERIQRRHKGCRSVEVEEYTWGSPTRDRQ
ALARGRFDVIICSDLFCSSVIYLAHRTRNVQEREFFSSLEGFRCRKEVFV
GEGVSEREDTGHCTNIEGEDFWNQTRWQRGCFPDVLLYELTPIVSAATRC
SKTDEMNSNGAGLCMGWT*
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mRNA from alignment at H-elongata_contig4648:1986..4651+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig4648.11743.1 ID=mRNA_H-elongata_contig4648.11743.1|Name=mRNA_H-elongata_contig4648.11743.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2666bp|location=Sequence derived from alignment at H-elongata_contig4648:1986..4651+ (Himanthalia elongata Himel1 dioecious)
GGTGTTCGAGTTCGGGAACCGCACAGCCATAGTATCTGGAGGGAACCAGA TTCAGAAATTGTTCGTCAGGGAGAGCGGGAAGGTATTCCCCTGCGGGTGG CGCTTAAGGGCGAACGGACAGATAATTTTTCCCTGAGCGTCGAGAGTTGC TTCGTCGGGGACAACAGTCATAGAGCGGGATGCACTACCGCGGGGGTGAG CGCGGCCGGCGATGTACGCTCGTTTTGGAGTCCTGTGTGTCTTATGTATA CGTATGGGGGGAAATTGGCATTCTCACGACACATTGCTTGGACAACTCGT TGCTGTGGTCTTTTGAGACGTCGGCTCAAAGTCAGAGAAGCTTTGTCCGT GTGTAGCACACCTCGACCCGACCCAATTAATACGATATCATCTGCCTCAC GTTTTCGGGGAACACCTCCCCCCTCTCTTCTAATGCTCTTGTCTCTCTGC AGGTCGTCCTAGACCTGTCCACGGGAAAGGCGAAGGGCTCGATCTCCGTC TTATCATCTTGCAAAGCTCGCAAAGTACGGGTAGCTGCGGTAAACGCGGG AGAAGAAATAGTGGGGGTAAAATCCACCGAAGCAGCAACAGGGATGAAGA GGGCGGCGAACGGTTCAGGTGGCGGCGAGGATAACGAAGAAATATATTTG CTGATTGCTTTTACCCCGGAGTGGACGGCGAGGTTCAACCGTCCGATCCT CCCGCTGGAGAGTCTACTCTTGCGCGTCGTCGGCTCATATGTAGAGTACC CTCCAGCCTGTGGCGAAAATGAAGGTAATGCGTCACGTTGTTGTCAACCC TTGAAAAACATGCGAGGCCACGCTCGCAGGCGAGAATCGTATAACGGTCA ATATAGTTACGACATGCCATCTCTCACGGAATGTTTTTTTTCTTCTTGCG GCACCCATCATGCCTCCTGCGCCCTCGCTTGCTTCCTCCGTCATGCACCG TCTGTGCAATGGTTTGCTCGGCCAAAACAAGTTTCTGCATGAAAGTCTCA CAATAATCTAAGCTATTTTACCCTCGTGGCTTCGACCGGCGGCCACTTCC GCAGCGGGAAACTCTCATCAGCTCATACCGATTGCCGCGCAGCAGAAGGC AGTGCAGGGTGCTGACCTGCCCAGCTGGGCGGCTCGCGACTACTCGTACA ACGTCCGTCGTCTGCTCTTCGCCGTCCACGACTGCTATCCGCGACGTGGT TCAAAAGGGTCTATCACCAACTCTGGACCCCAATGGGCGCTCGGGGAGGC ACATATAGATTCCGCTGCCGTACCCGCCACCGTTGAACCCGAAATCGGAC GCGAGCCCAAATCTGAACGCAACCCCGGAAAAGTAGGACAACAGTGCTCA GCACGCGAAATACTAGAACTGGTTCCATCATCACGATTGCTTTCGGAATC TGCCAAGGAACAACTTACTACCGCCCCCGCTGCCTACACCAGCAGCACCC GAAGCGGCATAAATTACAAGCGTACAAACCTCAGCAGCATCTCTAACCCT TGTCCTGAAGCCAGCGGTGCGAACGGCATCATCGAACTGAGCGTTGTGGA GTCTGCCGACCTCGGAGGCTACTTCGGGACGGTGTGGGACTGTTCGCTGG CACTCGGGGCATTCGTAGCATCCCTCGGCCCGCGGTCGATGGAGGGGAAA AGGGTTGTCGAGCTCGGGGCTGGTTGTGGCGTGGTGTCCGCCGTGTGCGC GACGCTGGGCGCGAAGGAAGTGGTGGCGACCGACACGAACGACTTGTTGC CCCTTTTAAGGCTGAATATGGAACGGATCCAGCGGCGGCACAAAGGCTGC CGAAGCGTCGAGGTGAGACCCGCGGAATCTACGATTGCGCTTTTTCTTTT CGACCGTACTTTTTATTTGAGAAATATGTTATGAACTCTCTGATGTTGCA CTTTGTTGTAGAATTTCCTCGTCTCTGACGTGTAGGCATACCTGTTTTGC AGGCAAAAACGCACAACAGTAAACTTGAAAAGACAAACGGACCAAGATCT TACTTTTTAATGACACTAAAGGAGCGGCAGTAACTGCGCCGGTACGACCG GGGTGATGTATTGTGGCGCAGATAAAAATTGCGCTGTATGTTGTTCTATG TGTGTTTCTGGTCTCTTATGTGCCATTGCATACACGTGAGGCTGATTTGC GTCAACAAAGCAAGCGTTCGTTTATCAATCGCCCGACAATGCTCCACCGA TCCCGAAAAGGTTGAAGAGTACACCTGGGGATCGCCTACGCGAGATCGAC AAGCCCTGGCGCGGGGAAGGTTTGACGTAATAATATGCTCGGATCTGTTT TTTGACCCCGCTCACTGGGAATCCCTGAAGAACTCATTTTCGATGCTCGC TGGGGGACGTTCATCGGTGATCTACCTCGCACACCGGACTCGGAATGTCC AGGAGCGCGAGTTTTTCTCCTCTCTGGAAGGATTTCGATGTCGGAAAGAA GTGTTCGTAGGGGAGGGAGTAAGTGAACGGGAGGATACAGGGCATTGTAC GAATATTGAGGGCGAGGATTTCTGGAATCAGACACGATGGCAGAGGGGAT GCTTTCCTGATGTCTTGCTGTACGAGCTCACGCCCATCGTCTCCGCAGCA ACGCGATGCAGCAAAACGGATGAAATGAACAGTAACGGCGCAGGACTGTG CATGGGCTGGACATGA
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Coding sequence (CDS) from alignment at H-elongata_contig4648:1986..4651+

>mRNA_H-elongata_contig4648.11743.1 ID=mRNA_H-elongata_contig4648.11743.1|Name=mRNA_H-elongata_contig4648.11743.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3414bp|location=Sequence derived from alignment at H-elongata_contig4648:1986..4651+ (Himanthalia elongata Himel1 dioecious)
GGTGTTCGAGTTCGGGAACCGCACAGCCATAGTATCTGGAGGGAACCAGA
TTCAGAAATTGTTCGTCAGGGAGAGCGGGAAGGTATTCCCCTGCGGGTGG
CGCTTAAGGGCGAACGGACAGATAATTTTTCCCTGAGCGTCGAGAGTTGC
TTCGTCGGGGACAACAGTCATAGAGCGGGATGCACTACCGCGGGGGTGAG
CGCGGCCGGCGATGTACGCTCGTTTTGGAGTCCTGGTGTTCGAGTTCGGG
AACCGCACAGCCATAGTATCTGGAGGGAACCAGATTCAGAAATTGTTCGT
CAGGGAGAGCGGGAAGGTATTCCCCTGCGGGTGGCGCTTAAGGGCGAACG
GACAGATAATTTTTCCCTGAGCGTCGAGAGTTGCTTCGTCGGGGACAACA
GTCATAGAGCGGGATGCACTACCGCGGGGGTGAGCGCGGCCGGCGATGTA
CGCTCGTTTTGGAGTCCTGTCGTCCTAGACCTGTCCACGGGAAAGGCGAA
GGGCTCGATCTCCGTCTTATCATCTTGCAAAGCTCGCAAAGTACGGGTAG
CTGCGGTAAACGCGGGAGAAGAAATAGTGGGGGTAAAATCCACCGAAGCA
GCAACAGGGATGAAGAGGGCGGCGAACGGTTCAGGTGGCGGCGAGGATAA
CGAAGAAATATATTTGCTGATTGCTTTTACCCCGGAGTGGACGGCGAGGT
TCAACCGTCCGATCCTCCCGCTGGAGAGTCTACTCTTGCGCGTCGTCGGC
TCATATGTAGAGTACCCTCCAGCCTGTGGCGAAAATGAAGGTAATGCGTC
ACGTTGTTGTCAACCCTTGAAAAACATGCGAGGCCACGCTCGCAGGCGAG
AATCGTCGTCCTAGACCTGTCCACGGGAAAGGCGAAGGGCTCGATCTCCG
TCTTATCATCTTGCAAAGCTCGCAAAGTACGGGTAGCTGCGGTAAACGCG
GGAGAAGAAATAGTGGGGGTAAAATCCACCGAAGCAGCAACAGGGATGAA
GAGGGCGGCGAACGGTTCAGGTGGCGGCGAGGATAACGAAGAAATATATT
TGCTGATTGCTTTTACCCCGGAGTGGACGGCGAGGTTCAACCGTCCGATC
CTCCCGCTGGAGAGTCTACTCTTGCGCGTCGTCGGCTCATATGTAGAGTA
CCCTCCAGCCTGTGGCGAAAATGAAGGTAATGCGTCACGTTGTTGTCAAC
CCTTGAAAAACATGCGAGGCCACGCTCGCAGGCGAGAATCCTGGGCGGCT
CGCGACTACTCGTACAACGTCCGTCGTCTGCTCTTCGCCGTCCACGACTG
CTATCCGCGACGTGGTTCAAAAGGGTCTATCACCAACTCTGGACCCCAAT
GGGCGCTCGGGGAGGCACATATAGATTCCGCTGCCGTACCCGCCACCGTT
GAACCCGAAATCGGACGCGAGCCCAAATCTGAACGCAACCCCGGAAAAGT
AGGACAACAGTGCTCAGCACGCGAAATACTAGAACTGGTTCCATCATCAC
GATTGCTTTCGGAATCTGCCAAGGAACAACTTACTACCGCCCCCGCTGCC
TACACCAGCAGCACCCGAAGCGGCATAAATTACAAGCGTACAAACCTCAG
CAGCATCTCTAACCCTTGTCCTGAAGCCAGCGGTGCGAACGGCATCATCG
AACTGAGCGTTGTGGAGTCTGCCGACCTCGGAGGCTACTTCGGGACGGTG
TGGGACTGTTCGCTGGCACTCGGGGCATTCGTAGCATCCCTCGGCCCGCG
GTCGATGGAGGGGAAAAGGGTTGTCGAGCTCGGGGCTGGTTGTGGCGTGG
TGTCCGCCGTGTGCGCGACGCTGGGCGCGAAGGAAGTGGTGGCGACCGAC
ACGAACGACTTGTTGCCCCTTTTAAGGCTGAATATGGAACGGATCCAGCG
GCGGCACAAAGGCTGCCGAAGCGTCGAGCTGGGCGGCTCGCGACTACTCG
TACAACGTCCGTCGTCTGCTCTTCGCCGTCCACGACTGCTATCCGCGACG
TGGTTCAAAAGGGTCTATCACCAACTCTGGACCCCAATGGGCGCTCGGGG
AGGCACATATAGATTCCGCTGCCGTACCCGCCACCGTTGAACCCGAAATC
GGACGCGAGCCCAAATCTGAACGCAACCCCGGAAAAGTAGGACAACAGTG
CTCAGCACGCGAAATACTAGAACTGGTTCCATCATCACGATTGCTTTCGG
AATCTGCCAAGGAACAACTTACTACCGCCCCCGCTGCCTACACCAGCAGC
ACCCGAAGCGGCATAAATTACAAGCGTACAAACCTCAGCAGCATCTCTAA
CCCTTGTCCTGAAGCCAGCGGTGCGAACGGCATCATCGAACTGAGCGTTG
TGGAGTCTGCCGACCTCGGAGGCTACTTCGGGACGGTGTGGGACTGTTCG
CTGGCACTCGGGGCATTCGTAGCATCCCTCGGCCCGCGGTCGATGGAGGG
GAAAAGGGTTGTCGAGCTCGGGGCTGGTTGTGGCGTGGTGTCCGCCGTGT
GCGCGACGCTGGGCGCGAAGGAAGTGGTGGCGACCGACACGAACGACTTG
TTGCCCCTTTTAAGGCTGAATATGGAACGGATCCAGCGGCGGCACAAAGG
CTGCCGAAGCGTCGAGGTTGAAGAGTACACCTGGGGATCGCCTACGCGAG
ATCGACAAGCCCTGGCGCGGGGAAGGTTTGACGTAATAATATGCTCGGAT
CTGTTTTGTTGAAGAGTACACCTGGGGATCGCCTACGCGAGATCGACAAG
CCCTGGCGCGGGGAAGGTTTGACGTAATAATATGCTCGGATCTGTTTTGT
TCATCGGTGATCTACCTCGCACACCGGACTCGGAATGTCCAGGAGCGCGA
GTTTTTCTCCTCTCTGGAAGGATTTCGATGTCGGAAAGAAGTGTTCGTAG
GGGAGGGAGTAAGTGAACGGGAGGATACAGGGCATTGTACGAATATTGAG
GGCGAGGATTTCTGGAATCAGACACGATGGCAGAGGGGATGCTTTCCTGA
TGTCTTGCTGTACGAGCTCACGCCCATCGTCTCCGCAGCAACGCGATGCA
GCAAAACGGATGAAATGAACAGTAACGGCGCAGGACTGTGCATGGGCTGG
ACATGAGTTCATCGGTGATCTACCTCGCACACCGGACTCGGAATGTCCAG
GAGCGCGAGTTTTTCTCCTCTCTGGAAGGATTTCGATGTCGGAAAGAAGT
GTTCGTAGGGGAGGGAGTAAGTGAACGGGAGGATACAGGGCATTGTACGA
ATATTGAGGGCGAGGATTTCTGGAATCAGACACGATGGCAGAGGGGATGC
TTTCCTGATGTCTTGCTGTACGAGCTCACGCCCATCGTCTCCGCAGCAAC
GCGATGCAGCAAAACGGATGAAATGAACAGTAACGGCGCAGGACTGTGCA
TGGGCTGGACATGA
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