mRNA_H-elongata_contig2099.6068.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig2099.6068.1
Unique NamemRNA_H-elongata_contig2099.6068.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A7D9LMQ1_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LMQ1_PARCT)

HSP 1 Score: 178 bits (452), Expect = 1.430e-50
Identity = 94/227 (41.41%), Postives = 137/227 (60.35%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G +D H+D  VRR +VL A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + + +   + G+A + A     P+ WP  E   +NEFKT GL T+ FPTL
Sbjct:  148 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVIDENELSVHVENEGPPQDPVMSA--NASVEELVLGSGSTSFIPMGQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTL 372
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BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: UPI00106C8F71 (uncharacterized protein LOC114545138 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C8F71)

HSP 1 Score: 173 bits (439), Expect = 1.320e-49
Identity = 90/227 (39.65%), Postives = 136/227 (59.91%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FS   DMDPG VP  L+GLTQ E+MLI++ CPIM+VYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR+G D+ HKD  VRR +V  A++WL+ N PF+  IEID  ++  LP NG+ ++L    +D+   +  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NEFKT GL ++ FPTL
Sbjct:   47 KNFSTGNDMDPGTVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADETHKDFTVRRHKVFEAISWLKTNNPFFKDIEIDRDIIQRLPENGVPEELRYIIDDNELPVHVENEGPPQEPVMSA--NATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDPLDWPSTEGNAVNEFKTDGLASMAFPTL 271
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: UPI00106CBCF8 (uncharacterized protein LOC114518711 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CBCF8)

HSP 1 Score: 181 bits (460), Expect = 2.110e-49
Identity = 95/227 (41.85%), Postives = 140/227 (61.67%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIM+VYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR+G D+ HKD  VRR RVL A+ WL+ N PF+  IEID  V+ +LP NG+ ++L    +D+  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NEFKT GL ++ FPTL
Sbjct:  333 KNFSAGNDMDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADETHKDFTVRRHRVLEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPKELRYVIDDNELSVHVENEGPPQEPVMSA--NATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDPLDWPSTEGNAVNEFKTDGLASMAFPTL 557
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A7D9LNP2_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LNP2_PARCT)

HSP 1 Score: 179 bits (455), Expect = 3.090e-49
Identity = 94/227 (41.41%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G +D H+D  VRR +VL A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NEFKT GL T+ FPTL
Sbjct:  316 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPHELRYVIDENELSVHVENEGPPQDPVMSA--NASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVSEVDPLDWPSTEGNLINEFKTDGLATMAFPTL 540
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BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A6S7GE38_PARCT (Helitron_like_N domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GE38_PARCT)

HSP 1 Score: 179 bits (455), Expect = 3.720e-49
Identity = 94/227 (41.41%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G +D H+D  VRR +VL A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NEFKT GL T+ FPTL
Sbjct:  159 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVIDENELSVHVENEGPPQDPVMSA--NASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTL 383
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A7D9LY68_PARCT (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LY68_PARCT)

HSP 1 Score: 179 bits (454), Expect = 6.100e-49
Identity = 94/227 (41.41%), Postives = 137/227 (60.35%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G +D H D  VRR +V  A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E  R+NEFKT GL T+ FPTL
Sbjct:  174 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVIDENEHSVHVENEGPPQDPVMSA--NASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNRVNEFKTDGLATMAFPTL 398
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A6S7I194_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I194_PARCT)

HSP 1 Score: 179 bits (455), Expect = 3.470e-48
Identity = 94/227 (41.41%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G +D H+D  VRR +VL A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NEFKT GL T+ FPTL
Sbjct:  313 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVIDENELSVHVENEGPPQDPVMSA--NASVEELVLGNGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINEFKTDGLATMAFPTL 537
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A7D9EWD8_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EWD8_PARCT)

HSP 1 Score: 179 bits (454), Expect = 4.540e-48
Identity = 94/227 (41.41%), Postives = 137/227 (60.35%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G +D H D  VRR +V  A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E  R+NEFKT GL T+ FPTL
Sbjct:  161 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAEDTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVIDENEHSVHVENEGPPQDPVMSA--NASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNRVNEFKTDGLATMAFPTL 385
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: UPI00106D8CF5 (uncharacterized protein LOC114518658 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D8CF5)

HSP 1 Score: 176 bits (445), Expect = 4.600e-47
Identity = 93/227 (40.97%), Postives = 135/227 (59.47%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIM+VYR +GGQR Y GHV+N  +D+  F+NRL     DL ++  RR G D  HKD  VRR +V  A+ WL+ N PF+  IEID  V+ +LP NG+ ++L    +D    + +E +   +     +  N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NEFKT GL ++ FPTL
Sbjct:  253 KNFSAGNDMDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRRGADQTHKDFTVRRHKVFEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPEELRYVIDDQELLVHAENEGPPQE--PEMSANATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDPLDWPSTEGNAVNEFKTDGLASMAFPTL 477
[Close]
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Match: A0A6S7G7B4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G7B4_PARCT)

HSP 1 Score: 174 bits (440), Expect = 3.460e-46
Identity = 92/227 (40.53%), Postives = 136/227 (59.91%), Query Frame = 1 
Query:   22 KPFSAATDMDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKDVGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*RVLFALTWLQLNIPFYHVIEIDDSVLAALPVNGLLQDLPKAFEDSNPNLDSEQDTDTESFLRAVVGNSMQEDAIVNQLMRKILRIQRGGNRVGSATKSA-----PVSWPVMEDTRLNEFKTQGLYTLCFPTL 687
            K FSA  DMDPGIVP  L+GLTQ E+MLI++ CPIMRVYR +GGQR Y GHV+N  +D+  F+NRL     DL +   RR G +D H+D  VR+ +VL A+ WL+ N PF+  IEID  V+ +LP NG+  +L    +++  ++  E +   +  + +   N+  E+ ++       + +++   + G+A + A     P+ WP  E   +NE KT GL T+ FPTL
Sbjct:  105 KKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVSIGRRHGAEDKHRDFTVRQHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVIDENELSVHVENEGPPQDPVMSA--NASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLDWPSTEGNLINELKTDGLATMAFPTL 329
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2099.6068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9LMQ1_PARCT1.430e-5041.41Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]
UPI00106C8F711.320e-4939.65uncharacterized protein LOC114545138 n=1 Tax=Dendr... [more]
UPI00106CBCF82.110e-4941.85uncharacterized protein LOC114518711 n=1 Tax=Dendr... [more]
A0A7D9LNP2_PARCT3.090e-4941.41Uncharacterized protein n=2 Tax=Paramuricea clavat... [more]
A0A6S7GE38_PARCT3.720e-4941.41Helitron_like_N domain-containing protein n=3 Tax=... [more]
A0A7D9LY68_PARCT6.100e-4941.41Helitron_like_N domain-containing protein (Fragmen... [more]
A0A6S7I194_PARCT3.470e-4841.41ATP-dependent DNA helicase n=3 Tax=Paramuricea cla... [more]
A0A7D9EWD8_PARCT4.540e-4841.41ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
UPI00106D8CF54.600e-4740.97uncharacterized protein LOC114518658 n=1 Tax=Dendr... [more]
A0A6S7G7B4_PARCT3.460e-4640.53ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig2099contigH-elongata_contig2099:10192..10914 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score86.7
Seed ortholog evalue6e-15
Seed eggNOG ortholog400682.PAC_15700047
EggNOG OGs2CC8B@1,2S3BW@2759,3A3QP@33154,3C1YH@33208
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size687
Cds size261
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig2099.6068.1prot_H-elongata_contig2099.6068.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig2099 10237..10497 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930172.5337138-UTR-H-elongata_contig2099:10191..102361622930172.5337138-UTR-H-elongata_contig2099:10191..10236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig2099 10192..10236 +
1691679308.281544-UTR-H-elongata_contig2099:10191..102361691679308.281544-UTR-H-elongata_contig2099:10191..10236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig2099 10192..10236 +
1622930172.5640228-UTR-H-elongata_contig2099:10497..106631622930172.5640228-UTR-H-elongata_contig2099:10497..10663Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig2099 10498..10663 +
1691679308.299551-UTR-H-elongata_contig2099:10497..106631691679308.299551-UTR-H-elongata_contig2099:10497..10663Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig2099 10498..10663 +
1622930172.5749788-UTR-H-elongata_contig2099:10699..109141622930172.5749788-UTR-H-elongata_contig2099:10699..10914Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig2099 10700..10914 +
1691679308.3082216-UTR-H-elongata_contig2099:10699..109141691679308.3082216-UTR-H-elongata_contig2099:10699..10914Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig2099 10700..10914 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930172.551061-CDS-H-elongata_contig2099:10236..104971622930172.551061-CDS-H-elongata_contig2099:10236..10497Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig2099 10237..10497 +
1691679308.2911654-CDS-H-elongata_contig2099:10236..104971691679308.2911654-CDS-H-elongata_contig2099:10236..10497Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig2099 10237..10497 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig2099.6068.1

>prot_H-elongata_contig2099.6068.1 ID=prot_H-elongata_contig2099.6068.1|Name=mRNA_H-elongata_contig2099.6068.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MDPGIVPPHLQGLTQAEDMLIAKGCPIMRVYRLNGGQRRYGGHVVNFAKD
VGDFVNRLHRTARDLLIVTARREGGDDIHKDLLVRR*
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mRNA from alignment at H-elongata_contig2099:10192..10914+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig2099.6068.1 ID=mRNA_H-elongata_contig2099.6068.1|Name=mRNA_H-elongata_contig2099.6068.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=723bp|location=Sequence derived from alignment at H-elongata_contig2099:10192..10914+ (Himanthalia elongata Himel1 dioecious)
AAGCACAAAAGCCACCCCATCAAGCCCTTTTCTGCTGCCACCGACATGGA
CCCCGGTATAGTGCCCCCACACCTCCAGGGTCTCACTCAGGCCGAAGATA
TGCTGATTGCAAAAGGATGTCCCATCATGCGCGTGTATCGCCTGAACGGG
GGACAGAGAAGGTACGGTGGACACGTCGTTAACTTCGCGAAGGATGTCGG
GGACTTTGTCAATCGCTTACATCGGACCGCACGGGACCTACTGATAGTCA
CCGCACGCCGTGAAGGGGGCGATGATATTCACAAGGATCTCTTGGTGCGC
CGGTAGAGGGTCCTCTTCGCCCTGACCTGGCTCCAGCTTAACATCCCCTT
CTACCACGTCATCGAGATCGATGACTCCGTTCTTGCTGCGCTGCCCGTCA
ACGGCCTGCTGCAAGACCTACCTAAGGCGTTTGAGGATAGCAACCCAAAC
CTCGATTCGGAACAGGATACTGGTCCTGAACAAGGCAGTGCCTTCGGGGA
GATGGAAGACACCGAGTCCTTTCTCCGAGCGGTCGTTGGAAACAGTATGC
AGGAGGATGCCATAGTTAATCAGCTCATGCGCAAGATACTACGGATACAG
CGTGGCGGCAATCGCGTTGGATCCGCTACCAAGTCCGCTCCCGTCTCTTG
GCCGGTTATGGAGGATACGCGGCTCAACGAGTTCAAGACCCAGGGACTGT
ACACCCTGTGCTTCCCGACTCTG
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Coding sequence (CDS) from alignment at H-elongata_contig2099:10192..10914+

>mRNA_H-elongata_contig2099.6068.1 ID=mRNA_H-elongata_contig2099.6068.1|Name=mRNA_H-elongata_contig2099.6068.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig2099:10192..10914+ (Himanthalia elongata Himel1 dioecious)
ATGGACCCCGGTATAGTGCCCCCACACCTCCAGGGTCTCACTCAGGCCGA
AGATATGCTGATTGCAAAAGGATGTCCCATCATGCGCGTGTATCGCCTGA
ACGGGGGACAGAGAAGGTACGGTGGACACGTCGTTAACTTCGCGAAGGAT
GTCGGGGACTTTGTCAATCGCTTACATCGGACCGCACGGGACCTACTGAT
AGTCACCGCACGCCGTGAAGGGGGCGATGATATTCACAAGGATCTCTTGG
TGCGCCGGTAGATGGACCCCGGTATAGTGCCCCCACACCTCCAGGGTCTC
ACTCAGGCCGAAGATATGCTGATTGCAAAAGGATGTCCCATCATGCGCGT
GTATCGCCTGAACGGGGGACAGAGAAGGTACGGTGGACACGTCGTTAACT
TCGCGAAGGATGTCGGGGACTTTGTCAATCGCTTACATCGGACCGCACGG
GACCTACTGATAGTCACCGCACGCCGTGAAGGGGGCGATGATATTCACAA
GGATCTCTTGGTGCGCCGGTAG
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