mRNA_H-elongata_contig20979.6063.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: D7FKM8_ECTSI (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKM8_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 2.860e-160 Identity = 225/296 (76.01%), Postives = 261/296 (88.18%), Query Frame = 2
Query: 2 IVSTTEVAPGKKSTKTDQITYGPFQNVEPFEDGGEMKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKHRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRKSGEGTA 889
I+S TE AP K+S K+DQ+TYGPF++V PF DGGE++IHYVNH+ FAK TSCLREIE+SNWGNIAVEEH+++VHAGAK+KGGFSRMDYMA+KHA+ NPSFRKL+A LP GASDIYYRDNIGN+STS V+H LG V+L++ +RFPMYGGWK +WYQGYNLPTEA L+H G HFTLE+PFGPPF +WVEDLTVKVILPEGA+N+VALPPFE +EARTERFT+LDT SGRPVVI+ MKNVVKEHNV+ KV YDFNRARM++EPLLL GFFLACFLAAM AGRVDMRIR+ G A
Sbjct: 172 ILSMTE-APSKRSVKSDQVTYGPFEDVPPFADGGELRIHYVNHAAFAKATSCLREIEVSNWGNIAVEEHYDLVHAGAKMKGGFSRMDYMAKKHAELPNPSFRKLDAYLPAGASDIYYRDNIGNISTSTVRHNLGAVELSVLSRFPMYGGWKNAWYQGYNLPTEAGLRHSGSHFTLEMPFGPPFPSVWVEDLTVKVILPEGAHNIVALPPFEGVSEARTERFTFLDTTGSGRPVVIMKMKNVVKEHNVMLKVTYDFNRARMMMEPLLLAGFFLACFLAAMAAGRVDMRIRRGGADAA 466
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: A0A6H5JJT4_9PHAE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT4_9PHAE) HSP 1 Score: 273 bits (698), Expect = 5.960e-81 Identity = 123/164 (75.00%), Postives = 147/164 (89.63%), Query Frame = 2
Query: 2 IVSTTEVAPGKKSTKTDQITYGPFQNVEPFEDGGEMKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKHRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEA 493
I+S TE AP K+S K+DQ+TYGPF++V PF +GGE++IHYVNH+ FAK TSCLREIE+SNWGNIAVEEH+++VHAGAK+KGGFSRMDYMA+KHA+ NPSFRKL+A LP GASDIYYRDNIGN+STS V+H LGGV+L+L +RFPMYGGWK +WYQGYNLPTE
Sbjct: 181 ILSMTE-APNKRSVKSDQVTYGPFEDVPPFANGGELRIHYVNHAAFAKATSCLREIEVSNWGNIAVEEHYDLVHAGAKMKGGFSRMDYMAKKHAELPNPSFRKLDAYLPAGASDIYYRDNIGNISTSTVRHNLGGVELSLLSRFPMYGGWKNAWYQGYNLPTEV 343
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: A0A8K1FFD1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFD1_PYTOL) HSP 1 Score: 274 bits (701), Expect = 6.700e-80 Identity = 135/273 (49.45%), Postives = 182/273 (66.67%), Query Frame = 2
Query: 56 ITYGPFQNVEPF-EDGGEMKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKHRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRK 871
ITYGP++NVEPF +++HY NHSPF VT+ ++EIE+S WG ++VEE +++ H GAKLKGGFSR+DY + SF +L A LP A ++YYRD IGNVSTS ++ +L RFP++GGWKT WY G+++PT + L G F LE+ F V+DLTVKVILPEG+ NV PFE + T R TYLDTP GRPV++++ KNV+ +HNV F+V +DF ++ ML EPLLLVG FLA F+ M+ R+D+ + K
Sbjct: 180 ITYGPYENVEPFVAPSNSLRVHYKNHSPFLTVTNLVKEIEVSMWGRVSVEEVYDLEHTGAKLKGGFSRLDYQMH---GARGASFYELRAYLPRDAVNVYYRDQIGNVSTSRLRQTETRQELQFKPRFPIFGGWKTQWYFGHSVPTHSVLSRSGSKFKLEVDFSTSIEEAAVDDLTVKVILPEGSTNVQVNLPFEVDAQTETSRQTYLDTPLFGRPVLVIHKKNVIAQHNVPFEVTFDFAQSFMLHEPLLLVGGFLAFFVVCMVLFRLDVSLVK 449
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: A0A662Y6I6_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6I6_9STRA) HSP 1 Score: 267 bits (682), Expect = 5.880e-77 Identity = 139/285 (48.77%), Postives = 177/285 (62.11%), Query Frame = 2
Query: 38 STKTDQITYGPFQNVEPFE---DGGEMKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKHRLGG---VDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRKS 874
S K IT GP+ ++EPF +K+HY NH+PF VT REIE+S WG ++VEE +++ H GAKLKGGFSR DY+ SF ++ A LP + ++YYRD IGN+STS ++ DL RFP++GGWK+ WY GY++PT + L H G F LEI F P G V+DLTVKVILPEGA NV PF R TYLDTP GRPV+I++ KNVV HNV F+V +DF ++ ML EPLLLV FLA FL M R+D+ + KS
Sbjct: 186 SRKGSMITCGPYTDIEPFAAVLSAAPLKLHYKNHAPFMTVTKLTREIEVSMWGRVSVEEVYDLEHTGAKLKGGFSRYDYV---QLHQRGASFHEMHAHLPKDSVNVYYRDQIGNISTSRLRPAGSSGSYQDLEFKPRFPLFGGWKSQWYLGYSVPTHSVLTHVGDKFKLEIDFSTPIQGAAVDDLTVKVILPEGASNVQVNVPFSVDATGEATRQTYLDTPAIGRPVLILDKKNVVAAHNVPFEVTFDFPQSFMLHEPLLLVSAFLAFFLVCMALFRLDLSLVKS 467
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: K3W6J7_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6J7_GLOUD) HSP 1 Score: 266 bits (680), Expect = 7.350e-77 Identity = 137/285 (48.07%), Postives = 185/285 (64.91%), Query Frame = 2
Query: 44 KTDQITYGPFQNVEPFE-DGGEMKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKHRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPF--EATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRKSGEGTA 889
K I+YGP+ N EPF D +++H+ NHSPF VT+ +REIE+S WG ++VEE ++++H GAKLKGGFSR +Y A+ +S F ++A LP A ++YYRD IGNVSTS ++ +L +RFP++GGWKT WY GY++PT + L G F LEI F G V+DLTVKVILPEG+ N+ A PF ++ T+ T R TYLDTP GRPV+I++ KNV+ HNV F+V ++F + ML EPLLLV FLA FL M+ R D+ + A
Sbjct: 175 KGAMISYGPYTNAEPFSSDAKSLRVHFKNHSPFMTVTNLVREIEVSMWGRVSVEEVYDLLHTGAKLKGGFSRYEYTAQNERGAS---FHDMQAYLPKDAVNVYYRDQIGNVSTSRLRVTSTRQELAFKSRFPIFGGWKTQWYLGYSVPTHSVLSRDGDKFKLEIDFSTSIEGAAVDDLTVKVILPEGSTNLQANLPFAVDSITD-NTRRQTYLDTPLVGRPVLIISKKNVIAAHNVPFEVTFEFPQTFMLHEPLLLVSAFLAFFLFCMVIFRFDVSLLAKSNAKA 455
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: H3H721_PHYRM (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H721_PHYRM) HSP 1 Score: 261 bits (668), Expect = 3.720e-76 Identity = 139/284 (48.94%), Postives = 182/284 (64.08%), Query Frame = 2
Query: 38 STKTDQITYGPFQNVEPFEDGGE---MKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKH--RLGG-VDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRK 871
S K ++ GP+ +VE F G E + +HY NH+PF +T REIE+S WG ++ EE ++M H GAKLK GFSR DY+ + H S+ SF ++ A LP + ++YYRD IGN+STS ++ R G +DL RFP++GGWK+ WY GY++PT + L H G F LE+ F P G V+DLTVKVILPEGA NV PF + T R TYLDTP GRPVV+++ KNVV HNV F+V +DF + ML EPLLLV FLA F+ M R+D+ I K
Sbjct: 90 SRKGSVVSLGPYTDVEAFAAGVEESPLSVHYKNHAPFMTITKLTREIEVSMWGRVSFEEVYDMEHTGAKLKDGFSRYDYV-QLHQRSA--SFHEMYAHLPKDSVNVYYRDQIGNISTSRLRPAGRTGSHLDLEFKPRFPLFGGWKSQWYLGYSVPTHSVLTHVGDKFKLEVDFSTPVQGASVDDLTVKVILPEGATNVQVNVPFSLDGTSETTRQTYLDTPAIGRPVVVLDKKNVVAAHNVPFEVTFDFPQQFMLHEPLLLVSAFLAFFIVCMFLFRLDISIAK 370
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: A0A2D4BXN7_PYTIN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXN7_PYTIN) HSP 1 Score: 262 bits (670), Expect = 1.960e-75 Identity = 138/291 (47.42%), Postives = 187/291 (64.26%), Query Frame = 2
Query: 2 IVSTTEVAPGKKSTKTDQITYGPFQNVEPF-EDGGEMKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKHRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRK 871
I S ++VAP + K +TYGP++N EPF +++H+ NHSPF VTS ++EIE+S WG ++VEE ++++H GAKLKGGFSR DY A+ + SF +L ASLP A ++YYRD IGNVSTS ++ +L RFP++GGWKT WY GY++PT A + +G F LE+ F V+DLT+KVILPEG+ NV PF + RT R TYLDT GRPVV+++ +NVV HN +V +++ A ML EPLLLV FLA F+ M R D+R+ K
Sbjct: 166 IESYSDVAP--VTHKGSVVTYGPYENAEPFVAPRNALRVHFKNHSPFMTVTSLVKEIEVSMWGRVSVEEVYDLLHTGAKLKGGFSRFDYTAK---GARGASFHELRASLPREAVNVYYRDQIGNVSTSRLRVTDTRQELEFKPRFPLFGGWKTQWYLGYSVPTYAVMTRQGTTFKLEMDFSTSLEDAAVDDLTLKVILPEGSTNVQVSVPFAVDEQRRTTRQTYLDTALVGRPVVVLSKRNVVAAHNAPIQVTFEYAPAFMLHEPLLLVAGFLAFFVVCMALFRCDVRLVK 451
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: D0NY30_PHYIT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=15 Tax=Phytophthora TaxID=4783 RepID=D0NY30_PHYIT) HSP 1 Score: 262 bits (669), Expect = 3.590e-75 Identity = 137/284 (48.24%), Postives = 182/284 (64.08%), Query Frame = 2
Query: 38 STKTDQITYGPFQNVEPFEDGGE---MKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVK---HRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRK 871
S K +T GP+ +V+ F G E + +HY NH+PF +T RE+E+S WG ++ EE ++M H GAKLKGGFSR DY+ + H S+ SF ++ A LP + ++YYRD IGN+STS ++ +L RFP++GGWK+ WY GY++PT + L H G F LE+ F P G V+DLT+KVILPEGA NV PF + + T R TYLDTP GRPVVI++ KNVV HNV F+V +DF + ML EPLLLV FLA F+ MI R+D+ I K
Sbjct: 181 SRKGSVVTLGPYTDVKSFAAGVESSPLSVHYKNHAPFMTITKLTREVEVSMWGRVSFEEVYDMEHTGAKLKGGFSRYDYV-QLHQRSA--SFHEMYAHLPKDSVNVYYRDQIGNISTSRLRPAGRTSSHQNLEFKPRFPLFGGWKSQWYLGYSVPTYSVLTHVGDKFKLEVDFSTPVQGASVDDLTLKVILPEGATNVQVSVPFSLDSSSETTRQTYLDTPAIGRPVVILDKKNVVASHNVPFEVTFDFPQHFMLHEPLLLVSAFLALFIICMILFRLDISIAK 461
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: A0A421F3U5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F3U5_9STRA) HSP 1 Score: 262 bits (669), Expect = 4.110e-75 Identity = 136/282 (48.23%), Postives = 180/282 (63.83%), Query Frame = 2
Query: 44 KTDQITYGPFQNVEPFEDGGE---MKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVK---HRLGGVDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRK 871
K ++ GP+ ++E F E + +H+ NH+PF +T REIE+S WG ++VEE ++M H GAKLKGGFSR DYM + H S+ SF ++ A LP + ++YYRD IGN+STS ++ DL RFP++GGWK+ WY GY++PT + L H G F LEI F P G V+DLT+KVILPEGA NV PF + + T R TYLDTP GRPVVI++ KNVV HNV F+V +DF + ML EPLLL+ F+A FL M+ R+D I K
Sbjct: 186 KGSVVSLGPYTDIEAFAASVEKAPLSVHFKNHAPFMTITKLTREIEVSMWGRVSVEEVYDMEHTGAKLKGGFSRFDYM-QLHQRSA--SFHEMHAYLPKDSVNVYYRDQIGNISTSRLRPAGRTASHQDLEFKPRFPIFGGWKSQWYLGYSVPTHSVLTHVGDKFKLEIDFSTPVQGASVDDLTLKVILPEGATNVQVNVPFSLDSSSETTRQTYLDTPAIGRPVVILDKKNVVAAHNVPFEVTFDFPQRFMLHEPLLLISAFMALFLLCMVLFRLDFSIVK 464
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Match: H3HC98_PHYRM (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 n=7 Tax=Phytophthora TaxID=4783 RepID=H3HC98_PHYRM) HSP 1 Score: 261 bits (668), Expect = 4.990e-75 Identity = 139/284 (48.94%), Postives = 182/284 (64.08%), Query Frame = 2
Query: 38 STKTDQITYGPFQNVEPFEDGGE---MKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRMDYMARKHADSSNPSFRKLEASLPPGASDIYYRDNIGNVSTSAVKH--RLGG-VDLTLGTRFPMYGGWKTSWYQGYNLPTEACLKHKGPHFTLEIPFGPPFHGMWVEDLTVKVILPEGAYNVVALPPFEATTEARTERFTYLDTPWSGRPVVIVNMKNVVKEHNVIFKVKYDFNRARMLVEPLLLVGFFLACFLAAMIAGRVDMRIRK 871
S K ++ GP+ +VE F G E + +HY NH+PF +T REIE+S WG ++ EE ++M H GAKLK GFSR DY+ + H S+ SF ++ A LP + ++YYRD IGN+STS ++ R G +DL RFP++GGWK+ WY GY++PT + L H G F LE+ F P G V+DLTVKVILPEGA NV PF + T R TYLDTP GRPVV+++ KNVV HNV F+V +DF + ML EPLLLV FLA F+ M R+D+ I K
Sbjct: 181 SRKGSVVSLGPYTDVEAFAAGVEESPLSVHYKNHAPFMTITKLTREIEVSMWGRVSFEEVYDMEHTGAKLKDGFSRYDYV-QLHQRSA--SFHEMYAHLPKDSVNVYYRDQIGNISTSRLRPAGRTGSHLDLEFKPRFPLFGGWKSQWYLGYSVPTHSVLTHVGDKFKLEVDFSTPVQGASVDDLTVKVILPEGATNVQVNVPFSLDGTSETTRQTYLDTPAIGRPVVVLDKKNVVAAHNVPFEVTFDFPQQFMLHEPLLLVSAFLAFFIVCMFLFRLDISIAK 461 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20979.6063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20979.6063.1 >prot_H-elongata_contig20979.6063.1 ID=prot_H-elongata_contig20979.6063.1|Name=mRNA_H-elongata_contig20979.6063.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=264bp MKIHYVNHSPFAKVTSCLREIEISNWGNIAVEEHFNMVHAGAKLKGGFSRback to top mRNA from alignment at H-elongata_contig20979:587..6667- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20979.6063.1 ID=mRNA_H-elongata_contig20979.6063.1|Name=mRNA_H-elongata_contig20979.6063.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6081bp|location=Sequence derived from alignment at H-elongata_contig20979:587..6667- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20979:587..6667- >mRNA_H-elongata_contig20979.6063.1 ID=mRNA_H-elongata_contig20979.6063.1|Name=mRNA_H-elongata_contig20979.6063.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1584bp|location=Sequence derived from alignment at H-elongata_contig20979:587..6667- (Himanthalia elongata Himel1 dioecious)back to top |