mRNA_H-elongata_contig20965.6057.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A6H5KX34_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX34_9PHAE) HSP 1 Score: 650 bits (1678), Expect = 3.030e-218 Identity = 419/893 (46.92%), Postives = 517/893 (57.89%), Query Frame = 1
Query: 292 MDKYGHHVEDELGNNDRLSDISTLRKWLDEVETQQRCSLGLHAPISKDMGARFSTFFGRPECGGFQPYTSKGLHKMVKKVVTKHMLYLVEMQNNPRKFSRKAQALQRDRFMGLKQIYKNLSGQEFASEAPCLRDSHHCNTRRLTEWNNHTHSVVIRTPSADYSLYDALIQVRRECERLGIVPVTGPTKSIDHRYRLLQLKVVDFHRKKIIVYESRRRQQWRSNIAPHHGDIVKSFSRQHLSECLRDALVTKDMDRVCLAVESGADPGTEIRGGLFPFMAVILKRSTSHIQRLLAAGAKIDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKVTGETDAKRVLNHRSSINAGLTAVAIAAIHRNELMVRFLMRLGAKPEVKCHEGYGAGEHAMMAGWTSLGLWLQKTRAYSSKGVYTFADISAERALRVAGIRMLDAIVTGTAEEDMGDAQKKAAS-----NERRPAATSSSGLLRPPSAYNRFDVF--------------------------------------------DIFSQT------------------QAHTTTLTTVKVLQEGYAAPDTETNRGHTALISAAYRGLEKCVHELIQEGADPNYTNRNXXXXXXXXXXXXXXXXXXXXXXXXXXXARVDFDGKAAGRYAFEKGFCRLAELLAVAASRGNELALDWEVERRRRTEKGETRKLIEM-----------STHEADLQQWIIHATKPMDAAHLEEMRQASCQ-RLASCDPRRCTAMRDDDGTTPQSLQQPRRRERCPKCTLVVPCRHYSSLETLMMQFPDGVPEWEWNKRGVAVKVKLRERNRLMNLCSAKNRMFGGKYDITWLRALHRAHRDREVSP 2733
MDKYGH++E EL N+ L + +TL+ WLDEV QQRC+LGLH PIS + G++FSTFF RPECGGF+ +T +H MVKKV+TK L L++MQNNP FS+ AQ QRDR GL+ ++ RDSHHC+TRRL E +NHTH VVIRTP D SLYDALIQVRREC RLG+VP TGP SIDHR RLLQ+KV DFHRK++++YES+RRQQWR +IAPH ++K+FS H SE LR AL KDMDRVC+ +ESGADP TE+R GLFP +A +LKRS IQRLL SIA+RHG DIAQ +V+TLR DKV G+ A R LNHRSS+N GLT +AIAAIHRNE M R LMRLGAKP VKCH+G+ AGEHA AGW GLWLQ+T+A+ +GVYTFAD++AE ALRVA RMLDAI +G ED + AS RP T + R S+ D ++ S++ Q + L TV +L EG AAPDTE++ GHTALISAAYRG V LIQEGAD XXXXXXXXXXXXXXXXXXXXXXXXXXX AG YAFE+GF LA+LLA+AA+ G+E A+DWE++R RR E+ + RKL++ EADL W+I TKP + A + + + S Q +P ++ +P QQ + RERCPKCTL VPC H++ + PD V EW N+RG + + + L A++ G + W R LH+AHRDR + P
Sbjct: 1 MDKYGHNLEQELDTNESLLEFATLKTWLDEVVAQQRCALGLHTPISAEQGSKFSTFFARPECGGFRQHTPAKIHNMVKKVLTKQFLALLDMQNNPLNFSKIAQIHQRDRVSGLQDQLMESRRSNLHND----RDSHHCDTRRLAEGSNHTHPVVIRTPPTDLSLYDALIQVRRECVRLGVVPATGPVHSIDHRCRLLQMKVADFHRKQMLIYESQRRQQWRIDIAPHDAALLKNFSHHHRSEHLRHALDAKDMDRVCVLLESGADPSTELRSGLFPMIAAVLKRSIPIIQRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIASRHGRRDIAQFLVETLRADKVVGDMKATRALNHRSSVNRGLTPLAIAAIHRNEAMARCLMRLGAKPAVKCHQGHVAGEHAAKAGWGVFGLWLQETQAFGDRGVYTFADMNAENALRVAEQRMLDAISSGETVEDDSKRNSRTASVASNSGGSRPGPTMTGSSSRQVSSAISGDXXXXXXXXXXXXXXXXXXXXXXXXXXAVSATATEEGHNQTLPEPLPEVLSESARDGGLSGFLDVTQFQLGQIRSKILLTVSILHEGRAAPDTESDSGHTALISAAYRGQSSSVRSLIQEGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAYAFERGFADLAQLLAIAAADGHEAAVDWELDRFRREEEEKERKLVQHLMDKQGGVGGDGVPEADLYDWMIRVTKPRETARIADRKLQSEQGSFDQAEP----GKHKNNSVSPSRGQQ-KGRERCPKCTLFVPCLHFAGAK-----LPDEVAEWSVNQRGASRRANAGGKR----LVYARS----GNESVAWWRTLHQAHRDRTLPP 871
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A836C9T3_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T3_9STRA) HSP 1 Score: 315 bits (807), Expect = 1.060e-90 Identity = 202/603 (33.50%), Postives = 292/603 (48.42%), Query Frame = 1
Query: 334 NDRLSDISTLRKWLDEVETQQRCSLGLHAPISKDMGARFSTFFGRPECGGFQPYTSKGLHKMVKKVVTKHMLYLVEMQNNPRK------FSRKAQALQRDRFMGLKQIYKNLSGQEFASEAPCLRDSHHCNTRRLTEWNNHTHSVVIRTPSADYSLYDALIQVRRECERLGIVPVTGPTKSIDHRYRLLQLKVVDFHRKKIIVYESRRRQQWRSNIAPHHGDIVKSFSRQHLSECLRDALVTKDMDRVCLAVESGADPGTEIRGGLFPFMAVILKRSTSH--------------------------IQRLLAAGAKIDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKVTGETDAK----RVLNHRSSINAGLTAVAIAAIHRNELMVRFLMRLGAKPEVKCHEGYGAGEHAMMAGWTSLGLWLQKTRAYSSKGVYTFADISAERALRVAGIRMLDAIVTGTAEEDMGDAQKKAASNERRPAATSSSGLLRPPSAYNRFDVFDIFSQTQAHTTTLTTVKVLQEGYAAPDTETNRGHTALISAAYRGLEKCVHELIQEGADPNYTNRN 2034
N +D ++ W+ +V Q RC LG+H P++ F++F+G PECGG++ +T + KM+K +++ LV MQ K R A QR++ M ++ Y+++S + F E C RD++HCN+RR+ E +NHTH +++ PS D S Y++L+ + EC LG+ PVTGP +DHR +LL+ K+ H+++ + +RR Q R P + + L+E LR A+ DM RV V+ GA P E R G+FP +A L R T I L AGA D VN GM+ LMWA +R D V VN LLE GA +G TA+ AAR + + + + A R+LN R++ G+TA+ +AA RNE M R L+R GA ++ H G+ A +HA A L WL+ TRA G+YT+AD+ AERA+ A + AI G + +S L R TV+VL EG+A PD ET+ G TAL++A Y G V L+ +G D Y NRN
Sbjct: 4 NCSTTDAEKMKAWVQQVMEQMRCKLGVHKPLTPHQVRPFTSFYGGPECGGYKAFTPTAVVKMLKSFLSRQFAVLVSMQEAFTKEGPEGWVKRVALMRQREQVMAIQDCYESVSREPFRHEIECTRDTNHCNSRRICEGSNHTHGIIVTPPSIDLSEYNSLVALVEECMSLGLDPVTGPVTGMDHRAKLLREKLAAHHKRQELAAAARRSMQRRDAARPWVAHELWTAGETQLAETLRIAIEGDDMARVVTLVQRGAPPNLENRWGMFPLLAAGLARDTGRAHTRSPRCLPPSLSKYTKSRRCCAGAIAALAQAGANPDHVNWLGMSALMWAARRGDLVTVNALLEAGATPAAQGGAFGTALHAAARANRAAAVEAMCEHVTRAAGAAPGHAAVAVARLLNVRATAAGGVTALMVAARRRNEGMARLLLRRGADLGIRDHHGFTAADHAAAAKHDKLARWLRDTRACGDGGIYTYADLQAERAIAAAEGELAQAIAQGGGGSXXXXXXXR----------SSMDALPR-------------------------TVRVLAEGHAPPDLETDEGQTALMAACYGGSAAAVEALLSQGCDACYVNRN 571
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A0M4ELM8_DROBS (G9a n=2 Tax=Drosophila busckii TaxID=30019 RepID=A0A0M4ELM8_DROBS) HSP 1 Score: 63.5 bits (153), Expect = 2.080e-6 Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 1165 LLAAGAK----IDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKVTGETDAKRVLNHRSSINA----GLTAVAIAAIHRNELMVRFLMRLGAKPEV 1533
LL GA ++ V+S T LM AV + M+N+ L+ GADV ++G G T++ IAA+ GS++ AQLIVD+ R+ ++ + N S I+A G TA+ AA + +V L+ GA P +
Sbjct: 1095 LLCKGASLQNFVNIVDSELRTALMCAVMNEKCDMLNLFLQCGADVAIKGPDGMTSLHIAAKLGSLEAAQLIVDSYRS--------SQNIANFLSLIDAQDEGGWTAMVWAAELGHTDIVSLLINHGANPNI 1217
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A7S4FUR6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FUR6_9EUGL) HSP 1 Score: 60.5 bits (145), Expect = 2.370e-6 Identity = 41/127 (32.28%), Postives = 65/127 (51.18%), Query Frame = 1
Query: 973 HGDIVKSFSRQHLSECLRDALVTKDMDRVCLAVESGADPGTEIRGGLFPFMAVILKRSTSH--IQRLLAAGAKIDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSM 1347
HG V + + + L AL + V L ++ ADP G P + +++ + S RLL GA+IDAV+ G T LM AV++ + +V +LLE+GAD+ V +G TA+ + R +
Sbjct: 81 HGLNVNQANPEDQTTPLIYALRNGLDEAVELLLQGNADPNFTASGAEGPGPSPLMQAAGSRKWAGRLLEQGARIDAVDPEGRTALMHAVEKQEAEVVQLLLERGADIAVVAKSGMTAVGLVTRRAQL 207
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A6P5PG72_MUSCR (POTE ankyrin domain family member A-like n=1 Tax=Mus caroli TaxID=10089 RepID=A0A6P5PG72_MUSCR) HSP 1 Score: 58.2 bits (139), Expect = 7.520e-6 Identity = 32/113 (28.32%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 1093 TEIRGGLFPFMAVILKRSTSHIQRLLAAGAKIDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKV--TGETDAKRVLN 1425
T I+ L P + + + Q L+ A + AV+S+ LM+AV+ D VMVN++L++G D ++ GWTA+ A G D+ ++++ + ++ + E + R++N
Sbjct: 44 TTIQDNLTPLLLALRENRLKMAQFLVRMEASVHAVDSQRRNSLMYAVRCDSPVMVNLILQQGVDTNLKDLFGWTALRYAT-EGDRDVRTILLELRKRNRAFQSSENSSIRLIN 155
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A084WH64_ANOSI (SOCS box domain-containing protein n=27 Tax=Anopheles TaxID=7164 RepID=A0A084WH64_ANOSI) HSP 1 Score: 60.5 bits (145), Expect = 1.030e-5 Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 1126 AVILKRSTSHIQRLLAAGAKIDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVD 1371
A+I S ++ LLA GAK++ +G+ PL +AV +++ VN+L+ +GAD+ G++A+ +AA HG +D+A L++D
Sbjct: 17 AIIRMVSMDELRILLACGAKVNEQVVQGLKPLHYAVWQNNEAAVNLLIVRGADLNAIDEVGYSALHLAAEHGYLDLATLLLD 98
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A182F3G5_ANOAL (Thioredoxin domain-containing protein n=1 Tax=Anopheles albimanus TaxID=7167 RepID=A0A182F3G5_ANOAL) HSP 1 Score: 60.5 bits (145), Expect = 1.840e-5 Identity = 28/82 (34.15%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 1126 AVILKRSTSHIQRLLAAGAKIDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVD 1371
A+I S ++ LLA GAK++ ++G+ PL +AV +++ VN+L+ +GAD+ G++A+ +AA HG +++A++++D
Sbjct: 26 AIIRMVSMDELRILLACGAKVNEQVTQGLKPLHYAVWQNNEAAVNLLIVRGADINAIDEVGYSALHLAAEHGYLNLAKILLD 107
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: A0A3B0KLM0_DROGU (Blast:Histone-lysine N-methyltransferase EHMT2 n=1 Tax=Drosophila guanche TaxID=7266 RepID=A0A3B0KLM0_DROGU) HSP 1 Score: 60.1 bits (144), Expect = 2.450e-5 Identity = 59/199 (29.65%), Postives = 95/199 (47.74%), Query Frame = 1
Query: 976 GDIVKSFSRQHLSECLRD---ALVTKDMDRVCLAVESGADPGTEIRGGLFPFMAVILKRSTS--HIQRLLAAGAK----IDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKVTGETDAKRVLNHRSSINA----GLTAVAIAAIHRNELMVRFLMRLGAKPEV 1533
G +V + R RD A+ D++RV + + + T IR L ++ S + LL GA ++ V+S T LM AV + M+N+ L+ GADV ++G G T++ IAA+ GS++ QLIVD+ + ++ + N S I+A G TA+ AA + +V L+ GA P +
Sbjct: 1288 GHVVSASGRVTTEFTSRDMYYAVQNDDLERVAEILAADFNVLTPIREFLNGTCLHLVAHSGTLQMAYLLLCKGASSQDFVNIVDSELRTALMCAVMNEKCDMLNLFLQCGADVAIKGPDGKTSLHIAAKLGSVEATQLIVDSYKA--------SRNITNFLSFIDAQDEGGWTAMVWAAELGHTDIVSLLLNQGADPNI 1478
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: UPI00155A1FC6 (uncharacterized protein LOC117897691 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155A1FC6) HSP 1 Score: 60.1 bits (144), Expect = 2.450e-5 Identity = 59/199 (29.65%), Postives = 95/199 (47.74%), Query Frame = 1
Query: 976 GDIVKSFSRQHLSECLRD---ALVTKDMDRVCLAVESGADPGTEIRGGLFPFMAVILKRSTS--HIQRLLAAGAK----IDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKVTGETDAKRVLNHRSSINA----GLTAVAIAAIHRNELMVRFLMRLGAKPEV 1533
G +V + R RD A+ D++RV + + + T IR L ++ S + LL GA ++ V+S T LM AV + M+N+ L+ GADV ++G G T++ IAA+ GS++ QLIVD+ + ++ + N S I+A G TA+ AA + +V L+ GA P +
Sbjct: 1307 GHVVSASGRVTTEFTSRDMYYAVQNDDLERVAEILAADFNVLTPIREFLNGTCLHLVAHSGTLQMAYLLLCKGASSQDFVNIVDSELRTALMCAVMNEKCDMLNLFLQCGADVAIKGPDGKTSLHIAAKLGSVEATQLIVDSYKA--------SRNITNFLSFIDAQDEGGWTAMVWAAELGHTDIVSLLLNQGADPNI 1497
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Match: UPI0007E6184F (histone-lysine N-methyltransferase EHMT2 isoform X2 n=1 Tax=Drosophila miranda TaxID=7229 RepID=UPI0007E6184F) HSP 1 Score: 58.5 bits (140), Expect = 6.920e-5 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 1
Query: 1165 LLAAGAK----IDAVNSRGMTPLMWAVKRDDYVMVNVLLEKGADVGVEGCTGWTAMSIAARHGSMDIAQLIVDTLRNDKVTGETDAKRVLNHRSSINA----GLTAVAIAAIHRNELMVRFLMRLGAKPEV 1533
LL GA ++ V+S T LM AV D M+N+ L+ GADV ++G G T++ IAA+ GS++ QLIV++ + ++ + N S I+A G TA+ AA + +V L+ GA P +
Sbjct: 917 LLCKGASSQDFVNIVDSELRTALMCAVMNDKCDMLNLFLQCGADVAIKGPDGKTSLHIAAKLGSVEATQLIVESYKA--------SRNITNFLSFIDAQDEGGWTAMVWAAELGHTDIVSLLLNQGADPNL 1039 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20965.6057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20965.6057.1 >prot_H-elongata_contig20965.6057.1 ID=prot_H-elongata_contig20965.6057.1|Name=mRNA_H-elongata_contig20965.6057.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=911bp NDQARINAVYKQATLGDCTDTKWETLFENTVLKIWRTYKGTSSLTAKRRFback to top mRNA from alignment at H-elongata_contig20965:379..4555- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20965.6057.1 ID=mRNA_H-elongata_contig20965.6057.1|Name=mRNA_H-elongata_contig20965.6057.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4177bp|location=Sequence derived from alignment at H-elongata_contig20965:379..4555- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20965:379..4555- >mRNA_H-elongata_contig20965.6057.1 ID=mRNA_H-elongata_contig20965.6057.1|Name=mRNA_H-elongata_contig20965.6057.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5466bp|location=Sequence derived from alignment at H-elongata_contig20965:379..4555- (Himanthalia elongata Himel1 dioecious)back to top |