mRNA_H-elongata_contig20952.6048.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: A0A6H5LLH5_9PHAE (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLH5_9PHAE) HSP 1 Score: 526 bits (1354), Expect = 3.590e-184 Identity = 263/330 (79.70%), Postives = 302/330 (91.52%), Query Frame = 1
Query: 1 IRQQTALAAEQFAGGIGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEEN-NDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
+R +TAL A A +GDV+R LS+AR+RLEKNR+L DEA+L+GEL+YLE +SSEA+FW+D SARKTLG+LNRLK+Q+DRLYRWR WE D ET IELCGEE +DE +A MLDEA + L LLQRDLDAWE++QLLSGK+D CGCRLTIMAGAGGTEAQDWA MLQRMY+RFF+RRGFKY+IVEEE+GEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQ+DLS+L +P+GEL+++TMRSGG+GGQNVNKVETGVR+KH+PTGIAVRCTQERSQ+LN+ELAL MLKEKLVVVMQEQQ +DLAEIR
Sbjct: 70 VRPRTALGAANLAVDVGDVRRALSSARERLEKNRQLFDEARLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLYRWRGWEADAETVIELCGEEEGDDEETAAMLDEATEALQLLQRDLDAWEMQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKIVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTKDLAEIR 399
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: D7FJS9_ECTSI (Peptide chain release factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS9_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 1.130e-177 Identity = 261/330 (79.09%), Postives = 301/330 (91.21%), Query Frame = 1
Query: 1 IRQQTALAAEQFAGGIGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEENN-DENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
+R +TAL A + A +GDV+R LS+AR+RL KNR+L DEAKL+GEL+YLE +SSEA+FW+D SARKTLG+LNRLK+Q+DRL+RWR WE D ET IELCGEE DE + MLDEA++ L LLQRDLDAWEL+QLLSGK+D CGCRLTIMAGAGGTEAQDWA MLQRMY+RFF+RRGFKY++VEEE+GEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQ+DLS+L +P+GEL+++TMRSGG+GGQNVNKVETGVR+KH+PTGIAVRCTQERSQ+LN+ELAL MLKEKLVVVMQEQQ +DLAEIR
Sbjct: 72 VRPRTALGAAKLAVDVGDVRRGLSSARERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWRGWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDLAEIR 401
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: A0A835Z7S5_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S5_9STRA) HSP 1 Score: 404 bits (1037), Expect = 9.580e-138 Identity = 202/295 (68.47%), Postives = 241/295 (81.69%), Query Frame = 1
Query: 109 LDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELC--GEENNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
+D KL GEL YLE + SEA FW D A+ARKTL E RLK QVDRL RW W GD E+A+EL G+ +D + + +EA TL +DLD WELE+LLSGK D G +LTI AGAGGTEAQDWALMLQRMY R+F+R+GF Y+++EEE GEVAGIKSC + VEG YG LAGEKGTHRLVRQSPFNAQAKRQTSFAGVE+FP++E EDL ++HIPDG+L+ITTMRSGG GGQNVNKVETGVR++H+PTGIAVRCTQERSQ++N+ LALKM+KE+L+VVMQEQQA ++A+IR
Sbjct: 1 MDSGKLTGELAYLEGVCSEAGFWDDAAAARKTLAESTRLKSQVDRLDRWAAWGGDVESALELLADGDALSDAEAVALAEEAAATLDAWAKDLDTWELERLLSGKFDNAGTQLTIQAGAGGTEAQDWALMLQRMYTRYFQRKGFSYKLIEEEPGEVAGIKSCRIDVEGPLCYGLLAGEKGTHRLVRQSPFNAQAKRQTSFAGVETFPVLELEDLDDVHIPDGDLEITTMRSGGKGGQNVNKVETGVRMRHIPTGIAVRCTQERSQLMNKALALKMIKERLLVVMQEQQAAEVAQIR 295
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: A0A7S2UWG0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWG0_9STRA) HSP 1 Score: 344 bits (882), Expect = 6.120e-113 Identity = 174/315 (55.24%), Postives = 235/315 (74.60%), Query Frame = 1
Query: 46 IGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEENNDENSATML-DEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
I +K+ L +R+E+N L+ LKGE+ LE +SE+ W D A + +L LK ++++ RW+ W+GD ETA EL + + D A ML +EA+ LQ+DLD++ELEQ+L G +D C CRLTI AGAGGT+AQDWA ML RMY R+ ER+G++ +++E GE AGIKS E+++ G FAYG LAGEKGTHRLVR SPFN+ KRQTSFAGVE+ PI+EQ+DL + IP+ +L++TTMR+GG GGQNVNKVET VR+KH+PTG++V+CTQER+Q +NR LALK LKEK++V+M+EQQA++LA+IR
Sbjct: 84 ISSLKKDLQGFHERIERNVDLVGILALKGEIKDLEGQASESSLWDDPARGQALTSKLGFLKGRLEQTERWQRWQGDIETACELGADPDLDSEEAAMLVEEALDISRNLQKDLDSFELEQMLGGPYDNCPCRLTIQAGAGGTDAQDWAAMLLRMYRRYAERQGYQVTLIDEMEGEEAGIKSAELEITGPFAYGRLAGEKGTHRLVRLSPFNSSNKRQTSFAGVETIPIVEQDDLGKFEIPEADLEVTTMRAGGKGGQNVNKVETAVRMKHLPTGLSVKCTQERTQTMNRALALKALKEKILVIMEEQQAKELAQIR 398
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: A0A0G4ETN2_VITBC (RF_PROK_I domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ETN2_VITBC) HSP 1 Score: 330 bits (845), Expect = 3.290e-107 Identity = 170/315 (53.97%), Postives = 228/315 (72.38%), Query Frame = 1
Query: 46 IGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIE-LCGEENNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
+ +VKRTL R+R ++N L D + E+D ++R +++ DFW D A A K L RLK + WR D E AI+ + EE +D L E++ T+ L R +D+WELE+L+ G +D+ GCRL + AGAGGTE+ DWA ML RMYLRF +R+G++ R+V+ GE AGIKS E+++EG++AYG L+GEKGTHRLVR SPFNAQ KRQTSFAGVE+ PI+ ED+ ++ I D +L++TTMRSGG GGQNVNKVET VRI H+PT I V+CTQERSQ+ N+E+ALKMLKE+L+V+ +EQ+ Q+LAEIR
Sbjct: 81 VNEVKRTLDTLRERYDRNVELADLPSIGREMDSIQRETTKEDFWDDPARASKLSARLQRLKESRSSVEGWRRSLEDAEAAIDFVTSEELSDAERNEFLAESVTTMKRLSRHMDSWELEKLMDGPYDRVGCRLYVTAGAGGTESCDWADMLLRMYLRFAQRKGWRARVVDRSDGEEAGIKSAEVEIEGEYAYGLLSGEKGTHRLVRISPFNAQGKRQTSFAGVETMPILPDEDVRDITIDDRDLEVTTMRSGGKGGQNVNKVETAVRILHIPTNIMVKCTQERSQLKNKEIALKMLKERLLVIKEEQRVQELAEIR 395
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: K9YDC1_HALP7 (Peptide chain release factor 2 n=1 Tax=Halothece sp. (strain PCC 7418) TaxID=65093 RepID=K9YDC1_HALP7) HSP 1 Score: 310 bits (794), Expect = 7.270e-101 Identity = 162/314 (51.59%), Postives = 223/314 (71.02%), Query Frame = 1
Query: 46 IGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEENNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
I D+KR + +RL K + LD ++ +++ LE+ +++ +FW D SA++TL +LN LK +++ ++WR+ DT+ IEL E + +EA Q L LQ+ L+ WEL+QLL +D+ G LT+ GAGGT+AQDWA ML RMY R+ E+RG+K + E G+ AGIKS +++EG +AYGYL GEKGTHRLVR SPFNA KRQTSFAGVE P+++Q + ++ +P+ +L+ITT R+GG GGQNVNKVET VRI H+PTGIAVRCTQERSQ+ NRE A+ +LK KL+V+ QEQ+AQ +AEIR
Sbjct: 3 ITDLKRDVETVMERLGKAQEYLDLPWIQAKIEDLEQEAAQPEFWDDPDSAQQTLQKLNDLKSALEQYHQWRDRAEDTQAIIELL----ETEADPALWEEATQNLEALQQSLERWELQQLLCEPYDERGAVLTLNTGAGGTDAQDWAQMLLRMYSRWAEKRGYKAHLAELSEGDEAGIKSASLEIEGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPMLDQTTIQDIELPEKDLEITTSRAGGKGGQNVNKVETAVRILHIPTGIAVRCTQERSQLQNREKAIALLKSKLIVIAQEQRAQKIAEIR 312
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: UPI0016835605 (peptide chain release factor 2 n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016835605) HSP 1 Score: 310 bits (794), Expect = 7.510e-101 Identity = 168/315 (53.33%), Postives = 226/315 (71.75%), Query Frame = 1
Query: 46 IGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWR-EWEGDTETAIELCGEENNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
I D+KR L RL K + LD L ++ LE+ +++ +FW D SA+KTL LN LK ++++ +W+ EWE D+ EL +E++ T+L+EA TL L+RDLD WEL+QLLSG++D G LTI AGAGGT+AQDWA ML RMY R+ E++G+K + E G+ AGIKS ++++G +AYGYL GEKGTHRLVR SPFNA KRQTSFAGVE P +E+ +++ L IP+ +L+ +T RSGG GGQNVNKVETG R+ H+PTGIAVRCT+ERSQ N+E AL +LK KL+V+ EQ+A+++AEIR
Sbjct: 3 ITDLKRDLQTIATRLGKTQDYLDLPALNAQIHDLEQSAAQPNFWDDQTSAQKTLQRLNDLKSNLEQMQQWQSEWE-DSSAIAELLEQEDDQ----TLLEEAASTLQRLERDLDRWELQQLLSGQYDSAGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAELSEGDEAGIKSVTLEIDGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEIMPALEENEIA-LEIPEKDLEYSTFRSGGKGGQNVNKVETGARVVHLPTGIAVRCTEERSQAQNKEKALTLLKAKLLVIAIEQRAKEIAEIR 311
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: A0A7S1T7C5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7C5_9RHOD) HSP 1 Score: 310 bits (795), Expect = 1.460e-100 Identity = 151/318 (47.48%), Postives = 228/318 (71.70%), Query Frame = 1
Query: 46 IGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEE----NNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
+G+++R LS R+R+E+N D + + LE M++E DFW D A++T+ LN + +D +WR+ DTE +EL G++ DE ++L+EA++ L + +L+ WE+ ++ SG +D+CG +T++AGAGG +AQDWA ML+RMY+R+ ER+G++ +VEE GE AGIKS +++ G++AYGY++ EKGTHRLVR SPFNAQ KRQTSFAGVE P++E + ++ + +P+ +++I+TMRSGG GGQNVNKVET VR+ H PTG++V+CT R+Q N+E AL +LK KL+V+ +EQ+ ++LAEIR
Sbjct: 22 VGEIRRRLSGVRERVEQNEGDADLDVFRAAVRELEAMTAEPDFWEDAVQAQRTMQRLNANRQVLDSYAKWRQVLQDTEATLELVGDDAGDGGGDEEVQSLLEEAMKDLRSVDSELEQWEIRKMFSGDYDRCGAVVTVLAGAGGVDAQDWAEMLKRMYIRWAERQGYRVEVVEESEGEEAGIKSVTLEISGEYAYGYVSAEKGTHRLVRISPFNAQGKRQTSFAGVEVMPLLEDDQVNNVEVPEKDIEISTMRSGGKGGQNVNKVETAVRVVHTPTGLSVKCTTARTQGENKEKALALLKSKLLVIAREQRVKELAEIR 339
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: UPI0019FFED5C (Peptide chain release factor 2 n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019FFED5C) HSP 1 Score: 308 bits (790), Expect = 3.540e-100 Identity = 171/312 (54.81%), Postives = 221/312 (70.83%), Query Frame = 1
Query: 52 DVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEENNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
D+KR + +RL K + LD L+ ++ LE+ +++ +FW D A A++ L +LN K Q+++L+ WR +TE +EL EE D A + DEA L L DLD WEL+QLLSG +DK G LTI AGAGGT+AQDWA ML RMY R+ ER+G++ +VE GE AG+KS +++ G +A+GYL EKGTHRLVR SPFNA KRQTSFAGVE PI++Q E+ IP+ +L+I T RSGGAGGQNVNKVET VRI H+PTGI+VRCTQERSQ+ NRE A+ +LK KL+V+ QEQQAQ +AEIR
Sbjct: 6 DLKRNFTTLTERLGKAQDYLDVPALEAKIQDLEQQAAQPEFWDDQARAQQILQDLNEHKAQLEQLHHWRASLEETEAILELL-EETAD---AALSDEASTHLSTLTHDLDQWELQQLLSGPYDKNGAVLTINAGAGGTDAQDWAEMLLRMYTRWGERQGYQVSLVEISEGEEAGVKSATLEIAGRYAFGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEVMPILDQ--TVEVEIPEKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTGISVRCTQERSQLQNREKAMALLKAKLLVIAQEQQAQAIAEIR 311
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Match: A0A6P0YVP1_9CYAN (Peptide chain release factor 2 n=1 Tax=Merismopedia sp. SIO2A8 TaxID=2607779 RepID=A0A6P0YVP1_9CYAN) HSP 1 Score: 308 bits (789), Expect = 5.020e-100 Identity = 170/312 (54.49%), Postives = 219/312 (70.19%), Query Frame = 1
Query: 52 DVKRTLSAARDRLEKNRRLLDEAKLKGELDYLERMSSEADFWSDGASARKTLGELNRLKVQVDRLYRWREWEGDTETAIELCGEENNDENSATMLDEAIQTLGLLQRDLDAWELEQLLSGKHDKCGCRLTIMAGAGGTEAQDWALMLQRMYLRFFERRGFKYRIVEEEAGEVAGIKSCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQEDLSELHIPDGELDITTMRSGGAGGQNVNKVETGVRIKHVPTGIAVRCTQERSQILNRELALKMLKEKLVVVMQEQQAQDLAEIR 987
D+KR + RL K + LD L + LE++S++ +FW D ASA++TL ELN LK +++ W GD + +EL E +D +L+EA T+ LL R+L+ WE++QLLSG +D+ G LTI AGAGGT+AQDWA ML RMY R+ ER G K + E G+ AGIKS +++EG +AYGYL EKGTHRLVR SPFNA KRQTSFAGVE P ++Q EL IPD +LDITT RSGG GGQNVNKVET VRI H+PTGIAVRCTQERSQ+ N+E A+ +LK KL+V+ QEQ+A+++A+IR
Sbjct: 5 DLKREIDLLSSRLGKTQEYLDIPALTARIQDLEQISAQPEFWDDQASAQRTLQELNDLKSHIEQFEGWHTQLGDAQAILELLELEPDD----GLLEEAQGTVSLLNRELEQWEVQQLLSGTYDQHGAVLTINAGAGGTDAQDWAEMLLRMYTRWAERHGCKVHLAEISDGDEAGIKSATLEIEGRYAYGYLKVEKGTHRLVRISPFNANGKRQTSFAGVEVMPTLDQS--IELDIPDKDLDITTTRSGGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAQEQRAKEIADIR 310 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20952.6048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20952.6048.1 >prot_H-elongata_contig20952.6048.1 ID=prot_H-elongata_contig20952.6048.1|Name=mRNA_H-elongata_contig20952.6048.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp IRQQTALAAEQFAGGIGDVKRTLSAARDRLEKNRRLLDEAKLKGELDYLEback to top mRNA from alignment at H-elongata_contig20952:676..5248- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20952.6048.1 ID=mRNA_H-elongata_contig20952.6048.1|Name=mRNA_H-elongata_contig20952.6048.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4573bp|location=Sequence derived from alignment at H-elongata_contig20952:676..5248- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20952:676..5248- >mRNA_H-elongata_contig20952.6048.1 ID=mRNA_H-elongata_contig20952.6048.1|Name=mRNA_H-elongata_contig20952.6048.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1974bp|location=Sequence derived from alignment at H-elongata_contig20952:676..5248- (Himanthalia elongata Himel1 dioecious)back to top |