mRNA_H-elongata_contig20944.6046.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20944.6046.1
Unique NamemRNA_H-elongata_contig20944.6046.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A6H5KR51_9PHAE (Transmembrane protein 267 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR51_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.490e-60
Identity = 139/290 (47.93%), Postives = 166/290 (57.24%), Query Frame = 1 
Query:    1 VRSDFLPRALVG-FLASHGPVWRAILDNASHACIAAASWAVVILISP----SPVFSSMSTPGSPLHRCTACAVLRA---RERLRASG-----------FLWARLSSTDSS------------VSVEQDDSP----GSQP---------RGDVGGATGRRRRVASAREVACAAGFGSALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVLTHNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQALLPMAVALSLRWNIGACCGRS 738
            V SDFLP  L+  FL SH  +W+A +DN SHA IAA+SWAVVI +SP    +  F  ++ PGSPLHRC +CA L A   R R  AS                R  + DSS            V   +  SP      QP         RG  GG T R    A A E   AA  GSALD+DHFLAAGS+R++ AT+L  RPWGHCVA L++AAF    LT N R A  V  AGA+HQLRD+TRRGLWLY P+G  T P+ YP YLLAQALLP+ +A+ LR   G+ CG S
Sbjct:   20 VCSDFLPTTLLSSFLDSHDALWKAAVDNLSHAGIAASSWAVVISLSPPSSGAANFPELALPGSPLHRCFSCARLLATGGRRRNHASNASHRPPPSXXXXXXXRPDTMDSSPKDLTSRSRYFDVESAEPSSPPPTISDQPALPMAARGERGAGGGCTARIPSAAVALEALFAACVGSALDLDHFLAAGSVRLSRATALAGRPWGHCVAALIVAAFAVAALTRNARAAVCVFSAGATHQLRDSTRRGLWLYPPRGAKTPPVSYPIYLLAQALLPLVMAMCLRSGHGSRCGYS 309
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: D7FYK9_ECTSI (Transmembrane protein 267 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK9_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.220e-31
Identity = 70/114 (61.40%), Postives = 81/114 (71.05%), Query Frame = 1 
Query:  310 PRGDVG---GATGRRRRVASAREVACAAGFGSALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVLTHNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSP 642
            PRG  G   G T RR   A+A EV  AA  GSALD+DHFLAAGS+R++ AT+L  RPWGHCVA L++AAF    LT N R A  V  AGA+HQLRD+TRRGLWLY P+GP T P
Sbjct:   39 PRGKRGAGEGCTARRPSAAAALEVLFAACVGSALDLDHFLAAGSVRLSRATALAGRPWGHCVAALIVAAFAVAALTRNARAAVCVFSAGATHQLRDSTRRGLWLYPPRGPKTPP 152
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A7S2W8E3_9STRA (Transmembrane protein 267 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8E3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.620e-16
Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:  403 DVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVLTHNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQALLPMAVA 696
            D+DHFLAAGSLR+  AT L  RP+GH +        +A +LT  +R   LV  A  SHQLRDA RRG+WL+ P G +T+PL +P YL+    LP+ VA
Sbjct:    1 DLDHFLAAGSLRLQDATRLSHRPFGHALLAAGCLGALAALLTRQRRKGVLVATAILSHQLRDALRRGMWLF-PLG-STAPLPFPVYLVCLFSLPLLVA 96
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A024GKZ5_9STRA (Transmembrane protein 267 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GKZ5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.850e-14
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1 
Query:  397 ALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVL-AAFVAFVLTHNKRVA-----ALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQALLPMAVA 696
            A+D+DHF+AAGS R+ +AT+L +RP+ H  AF+ L   FV      N +V      AL+ +A +SHQLRDA R G+WL+ P G +T P+ Y  YL  Q LLP+++A
Sbjct:   78 AMDLDHFIAAGSFRIDAATNLKKRPFAHAFAFIALMCVFVWIQSAGNTKVVRFQRVALLWIALSSHQLRDAVRHGVWLW-PFG-STPPIPYALYLFIQVLLPLSIA 181
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A482SJG6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJG6_9ARCH)

HSP 1 Score: 80.9 bits (198), Expect = 5.000e-14
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 1 
Query:  343 RRRVASAREVACAAGFGSALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVLTHNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQALLPMAVALSLRWN 714
            R+   + +E+A A     ALDVDHF+AAGS  +  AT+L  RP+GH +AF+   + + + ++ N R A L+ +A  SH LRD+ +RGLWL+ P   +T P+ +        +L  A+ L +R N
Sbjct:   73 RQFAGNGKELALAGFTSCALDVDHFIAAGSASLQDATNLPHRPFGHALAFVPCVSLLYYAVSRNSRTAKLLFVALLSHHLRDSMKRGLWLW-PMDYSTPPIPFYYVFPMYLVLTWAMRLLMRCN 195
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A131YR77_RHIAP (Transmembrane protein 267 n=3 Tax=Rhipicephalus TaxID=34630 RepID=A0A131YR77_RHIAP)

HSP 1 Score: 77.4 bits (189), Expect = 6.040e-13
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1 
Query:  334 TGRRRRVASAREVACAAGFGSALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVL------THNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQA 675
            +GR  R AS  E   +  FG A+DVDHFLAA SL++  AT+L  RP+ HC + ++++  V  +L      +   +VA + ++A ASH LRD+ RRGLWL+ P G +TSPL  P Y +  A
Sbjct:   52 SGRTLRKASLLESLLSGLFGCAVDVDHFLAARSLKIEKATNLQTRPFLHCSSVVLVSLSVVALLGRLLGLSQVYKVALIAIVAVASHHLRDSIRRGLWLW-PLG-STSPLKLPVYYIGLA 169
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A834MKT9_RHYFE (Transmembrane protein 267 n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834MKT9_RHYFE)

HSP 1 Score: 76.6 bits (187), Expect = 1.130e-12
Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 1 
Query:  367 EVACAAGFGSALDVDHFLAAGSLRMTSATSLVERPWGHC-----VAFLVLAAFVAFVLTHN--KRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQALLPMAVALSL 705
            E+A  A   S +D+DHF+AA S  +  AT L  RP+ HC     V F++LA  +++ L  N  KR A L+L A  SH +RDATRRGLWLY P G +T+P+ Y  Y+    L+P  V LSL
Sbjct:   63 EIAICALIASMIDLDHFIAAKSFSLKDATRLKNRPFLHCTTLPLVVFMILAV-ISYSLQWNSLKRFALLLLTAFISHHIRDATRRGLWLY-PFG-STAPIPYAFYITLTCLVPF-VFLSL 178
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A6M2CPZ3_RHIMP (Transmembrane protein 267 n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CPZ3_RHIMP)

HSP 1 Score: 77.8 bits (190), Expect = 1.620e-12
Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 1 
Query:  334 TGRRRRVASAREVACAAGFGSALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVL------THNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAY---LLAQALLPMA 690
            +GR  R AS  E   +  FG A+DVDHFLAA SL++ +AT+L  RP+ HC + ++++  V  +L      +   +VA + ++A ASH LRD+ RRGLWL+ P G +TSPL  P Y   L+   L+ MA
Sbjct:  129 SGRPLRKASLLESLLSGLFGCAVDVDHFLAARSLKIENATNLKTRPFLHCSSVVLVSLLVVALLGKLLGLSQVYKVALIAIVAVASHHLRDSIRRGLWLW-PFG-STSPLKLPIYYSGLVCTVLIAMA 254
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A9VD36_MONBE (Transmembrane protein 267 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VD36_MONBE)

HSP 1 Score: 73.2 bits (178), Expect = 3.150e-11
Identity = 47/117 (40.17%), Postives = 61/117 (52.14%), Query Frame = 1 
Query:  394 SALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVLTHNKRVAA-------LVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQ-ALLPMAVALSLRWNIG 720
            S +D+DHF  A    +T+ATSL  RPW H +   + AA +   + H   VA        L L A  +HQLRDA RRGLWLY   G  + P+ Y  YL    A+ P  +A   RW+ G
Sbjct:  111 SLMDLDHFFHASRWSLTAATSLSTRPWLHSLPVAIAAALLLSYVAHRCNVAGAHRDTFLLPLTAVLTHQLRDAHRRGLWLYPLAGGASIPISYTFYLTFNVAIWPAVLAQLSRWSPG 227
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BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Match: A0A2P8ZFL3_BLAGE (Transmembrane protein 267 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8ZFL3_BLAGE)

HSP 1 Score: 71.6 bits (174), Expect = 6.720e-11
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 1 
Query:  391 GSALDVDHFLAAGSLRMTSATSLVERPWGHCVAFLVLAAFVAFVL-------THNKRVAALVLLAGASHQLRDATRRGLWLYAPQGPNTSPLGYPAYLLAQALLPMAVA 696
            GSA+D+DHF AA S ++  A  L  RP+ HC + L LA F+A  L       T  +R+  ++L A  SH +RDATRRG W++ P G +T P+ Y  YLLA   LP  +A
Sbjct:   74 GSAIDLDHFAAAKSFKLQDARMLTSRPFMHCTS-LPLAVFIAVSLPAYLYHWTSVQRLLWIMLAAILSHHIRDATRRGFWMW-PFG-STPPVPYVYYLLANMSLPHIIA 179
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20944.6046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR51_9PHAE1.490e-6047.93Transmembrane protein 267 n=1 Tax=Ectocarpus sp. C... [more]
D7FYK9_ECTSI1.220e-3161.40Transmembrane protein 267 n=1 Tax=Ectocarpus silic... [more]
A0A7S2W8E3_9STRA2.620e-1650.00Transmembrane protein 267 n=1 Tax=Rhizochromulina ... [more]
A0A024GKZ5_9STRA3.850e-1446.23Transmembrane protein 267 n=2 Tax=Albugo candida T... [more]
A0A482SJG6_9ARCH5.000e-1437.90Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A131YR77_RHIAP6.040e-1343.33Transmembrane protein 267 n=3 Tax=Rhipicephalus Ta... [more]
A0A834MKT9_RHYFE1.130e-1245.83Transmembrane protein 267 n=1 Tax=Rhynchophorus fe... [more]
A0A6M2CPZ3_RHIMP1.620e-1242.97Transmembrane protein 267 n=1 Tax=Rhipicephalus mi... [more]
A9VD36_MONBE3.150e-1140.17Transmembrane protein 267 n=1 Tax=Monosiga brevico... [more]
A0A2P8ZFL3_BLAGE6.720e-1144.04Transmembrane protein 267 n=1 Tax=Blattella german... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20944contigH-elongata_contig20944:1143..3266 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.6
Seed ortholog evalue1.3e-16
Seed eggNOG ortholog157072.XP_008866583.1
Preferred nameC5orf28
EggNOG OGs2CHIK@1,2S7YE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1202
Cds size714
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20944.6046.1prot_H-elongata_contig20944.6046.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20944 1761..2934 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930170.5694256-UTR-H-elongata_contig20944:1142..12761622930170.5694256-UTR-H-elongata_contig20944:1142..1276Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20944 1143..1276 +
1691679307.4923787-UTR-H-elongata_contig20944:1142..12761691679307.4923787-UTR-H-elongata_contig20944:1142..1276Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20944 1143..1276 +
1622930170.5845492-UTR-H-elongata_contig20944:1738..17601622930170.5845492-UTR-H-elongata_contig20944:1738..1760Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20944 1739..1760 +
1691679307.5078511-UTR-H-elongata_contig20944:1738..17601691679307.5078511-UTR-H-elongata_contig20944:1738..1760Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20944 1739..1760 +
1622930170.6416197-UTR-H-elongata_contig20944:2934..32661622930170.6416197-UTR-H-elongata_contig20944:2934..3266Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20944 2935..3266 +
1691679307.5555987-UTR-H-elongata_contig20944:2934..32661691679307.5555987-UTR-H-elongata_contig20944:2934..3266Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20944 2935..3266 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930170.5969517-CDS-H-elongata_contig20944:1760..21081622930170.5969517-CDS-H-elongata_contig20944:1760..2108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20944 1761..2108 +
1691679307.5253208-CDS-H-elongata_contig20944:1760..21081691679307.5253208-CDS-H-elongata_contig20944:1760..2108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20944 1761..2108 +
1622930170.6140194-CDS-H-elongata_contig20944:2419..26721622930170.6140194-CDS-H-elongata_contig20944:2419..2672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20944 2420..2672 +
1691679307.536883-CDS-H-elongata_contig20944:2419..26721691679307.536883-CDS-H-elongata_contig20944:2419..2672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20944 2420..2672 +
1622930170.62918-CDS-H-elongata_contig20944:2821..29341622930170.62918-CDS-H-elongata_contig20944:2821..2934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20944 2822..2934 +
1691679307.5463278-CDS-H-elongata_contig20944:2821..29341691679307.5463278-CDS-H-elongata_contig20944:2821..2934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20944 2822..2934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20944.6046.1

>prot_H-elongata_contig20944.6046.1 ID=prot_H-elongata_contig20944.6046.1|Name=mRNA_H-elongata_contig20944.6046.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
MSTPGSPLHRCTACAVLRARERLRASGFLWARLSSTDSSVSVEQDDSPGS
QPRGDVGGATGRRRRVASAREVACAAGFGSALDVDHFLAAGSLRMTSATS
LVERPWGHCVAFLVLAAFVAFVLTHNKRVAALVLLAGASHQLRDATRRGL
WLYAPQGPNTSPLGYPAYLLAQALLPMAVALSLRWNIGACCGRSLAGDVG
DRRSQRPRYSFVGESPSLSSGLMQGEGNRDGEFLLAP*
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mRNA from alignment at H-elongata_contig20944:1143..3266+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20944.6046.1 ID=mRNA_H-elongata_contig20944.6046.1|Name=mRNA_H-elongata_contig20944.6046.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2124bp|location=Sequence derived from alignment at H-elongata_contig20944:1143..3266+ (Himanthalia elongata Himel1 dioecious)
GTGCGCAGTGATTTTCTCCCCAGAGCGCTGGTCGGGTTCTTGGCTTCCCA
TGGCCCAGTTTGGAGGGCTATCCTCGACAACGCATCGCACGCGTGCATCG
CCGCTGCGTCCTGGGCAGTGGTGATACTGATCAGGTGCAGCCCCAGCGCG
CTCTAGCAACTGATGCAACATGCTGATGGACGCGTGCGTGTGAAGTATCG
CGTCTTCCGCTCGGGGAAGGCGTCATCGTTGAGTGATTCTTGATGCCGAG
GTGGATACAGAGGCGGAGATTGTACACAACTGGTGTGGTGCACGGAGTGT
ATCTCGCGCCCGAGCGCGCACTCTTGTAGAAACTGTGGAGATGCGTCCGC
AGCAGAGGCAACAAGAGTCGTGTCGGGCAACGCAATGCCGTCGGAAGTAT
GCTCCGGATAAAACGATAAATGTGGGGGTTGTAAAAAGCCGAAATAAGAT
AATGGGGGAAGACGTGTTCCGGCTCGACGAAAGAACATATATAATTCTCT
CGAACGCCTGAGCTCCTCCTTTCATTCAACCCCTCCCCCGCCATTCACAA
CATTCTCCTTGTCCTTATCCGTTGGTCCCTGTGTGAACCCGCCAAGTCCG
TCGCCTGTGTTCTCATCCATGTCGACGCCGGGAAGCCCACTCCATCGATG
CACCGCGTGTGCTGTCCTGCGCGCTCGAGAACGGCTGCGCGCGAGCGGCT
TCTTGTGGGCGAGATTATCTTCGACCGACAGCAGCGTTAGCGTCGAGCAG
GATGATTCGCCAGGGTCGCAGCCTCGCGGAGATGTGGGAGGTGCAACAGG
CAGGCGCCGCAGAGTGGCGTCGGCGAGGGAGGTAGCTTGCGCGGCGGGCT
TCGGCAGCGCGCTCGACGTGGACCACTTTCTGGCGGCGGGTTCACTGAGG
ATGACGAGTGCGACGAGTCTTGTAGAGCGCCCGTGGGGTCACTGTGTGGC
TTTCCTGGTGTTGGCGGTGAGCATTTTTTAGGATAGTACTAGGACATTGA
AAATGTATATATCAGGAGGTAACGGGAATTTCTGCGTCTTCTGAAGCACG
TGGGTTGCGAACAAGCCTCTGACCCAGAGAGAAACCTTATTGCAGGAAGC
GCAGGAGAAAAGGAGACTTTTAATGATTTTGTCTCACAAACCTTAGCTCT
GGATAGAAGACCCGATCGACTTCGTTTACCGCAAAATGCCGTACGCCGAA
CGAGCAGCATGTACGCCACCCGAATCGAAACCCCTTAAGTGGCGCCGCGT
GCTGTGCTCTTTATTCTTTGCGAGCAGGCCTTTGTGGCGTTCGTGTTGAC
CCATAACAAGCGAGTGGCCGCCTTGGTGCTCTTGGCGGGCGCGTCCCACC
AGCTGCGAGACGCTACACGCAGAGGGCTTTGGCTCTACGCGCCTCAGGGA
CCAAATACGTCACCGTTGGGCTACCCAGCATATCTGCTTGCGCAGGCCCT
GTTGCCGATGGCGGTCGCGCTGTCCTTGAGGTGGAACATTGGCGCCTGCT
GTGGACGCTCTCTCGCGGGTGACGTTGGGGGTAAGTGGCGAGATGGTATA
TTTTTTGTTTTATTGCTTTGATCAATATAGAACTCTCTCATCGATCGAGG
TCGCCTTAAACTCGTGAACTTCAACCTTCTCATCCGTTCGCGCTACCTTC
TCTTTCCCCCCCTCAAAATATCCCGACAGATAGACGAAGCCAACGACCGC
GGTATTCGTTTGTCGGCGAATCGCCTTCTCTTAGTTCTGGTCTTATGCAA
GGCGAGGGGAATCGAGATGGAGAGTTTCTGCTGGCCCCGTAGTCTTTCTT
TTTGGCGGCATCACACTGGAATACTATAAATAGAGTACTATAGTAGGGTA
GCTATAAGGAGAGTACTATTAGTAAGAGTACTAAAAGTAGAGTACTATAG
TAGAGTATCATACTATATCCCAGTAACTAACGCGGAAGTAGTGCTAAGGA
TGGACATGACAAGAACCCACCCGCGGTCTTCTCCCGGTATTTTGGTCGCC
GGTAGGCCATCAATGCGATAAGTGCAAAATGAGAGCGAGACCGTTTGATT
GTCGAATCGCTTTTGAATTGCCTCGTTGCCTCGCGGAGTCATCGCGGCGT
GAGCAACCGTCTCGTGAACAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig20944:1143..3266+

>mRNA_H-elongata_contig20944.6046.1 ID=mRNA_H-elongata_contig20944.6046.1|Name=mRNA_H-elongata_contig20944.6046.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at H-elongata_contig20944:1143..3266+ (Himanthalia elongata Himel1 dioecious)
ATGTCGACGCCGGGAAGCCCACTCCATCGATGCACCGCGTGTGCTGTCCT
GCGCGCTCGAGAACGGCTGCGCGCGAGCGGCTTCTTGTGGGCGAGATTAT
CTTCGACCGACAGCAGCGTTAGCGTCGAGCAGGATGATTCGCCAGGGTCG
CAGCCTCGCGGAGATGTGGGAGGTGCAACAGGCAGGCGCCGCAGAGTGGC
GTCGGCGAGGGAGGTAGCTTGCGCGGCGGGCTTCGGCAGCGCGCTCGACG
TGGACCACTTTCTGGCGGCGGGTTCACTGAGGATGACGAGTGCGACGAGT
CTTGTAGAGCGCCCGTGGGGTCACTGTGTGGCTTTCCTGGTGTTGGCGAT
GTCGACGCCGGGAAGCCCACTCCATCGATGCACCGCGTGTGCTGTCCTGC
GCGCTCGAGAACGGCTGCGCGCGAGCGGCTTCTTGTGGGCGAGATTATCT
TCGACCGACAGCAGCGTTAGCGTCGAGCAGGATGATTCGCCAGGGTCGCA
GCCTCGCGGAGATGTGGGAGGTGCAACAGGCAGGCGCCGCAGAGTGGCGT
CGGCGAGGGAGGTAGCTTGCGCGGCGGGCTTCGGCAGCGCGCTCGACGTG
GACCACTTTCTGGCGGCGGGTTCACTGAGGATGACGAGTGCGACGAGTCT
TGTAGAGCGCCCGTGGGGTCACTGTGTGGCTTTCCTGGTGTTGGCGGCCT
TTGTGGCGTTCGTGTTGACCCATAACAAGCGAGTGGCCGCCTTGGTGCTC
TTGGCGGGCGCGTCCCACCAGCTGCGAGACGCTACACGCAGAGGGCTTTG
GCTCTACGCGCCTCAGGGACCAAATACGTCACCGTTGGGCTACCCAGCAT
ATCTGCTTGCGCAGGCCCTGTTGCCGATGGCGGTCGCGCTGTCCTTGAGG
TGGAACATTGGCGCCTGCTGTGGACGCTCTCTCGCGGGTGACGTTGGGGG
CCTTTGTGGCGTTCGTGTTGACCCATAACAAGCGAGTGGCCGCCTTGGTG
CTCTTGGCGGGCGCGTCCCACCAGCTGCGAGACGCTACACGCAGAGGGCT
TTGGCTCTACGCGCCTCAGGGACCAAATACGTCACCGTTGGGCTACCCAG
CATATCTGCTTGCGCAGGCCCTGTTGCCGATGGCGGTCGCGCTGTCCTTG
AGGTGGAACATTGGCGCCTGCTGTGGACGCTCTCTCGCGGGTGACGTTGG
GGATAGACGAAGCCAACGACCGCGGTATTCGTTTGTCGGCGAATCGCCTT
CTCTTAGTTCTGGTCTTATGCAAGGCGAGGGGAATCGAGATGGAGAGTTT
CTGCTGGCCCCGTAGATAGACGAAGCCAACGACCGCGGTATTCGTTTGTC
GGCGAATCGCCTTCTCTTAGTTCTGGTCTTATGCAAGGCGAGGGGAATCG
AGATGGAGAGTTTCTGCTGGCCCCGTAG
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