mRNA_H-elongata_contig2093.6043.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: D8LQA7_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA7_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.130e-26 Identity = 56/98 (57.14%), Postives = 67/98 (68.37%), Query Frame = -1
Query: 280 GYRPYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEHA---------PKNTNNEVTLRGSLPGRRARATPGS 546
G RPYLSDLAVA R+RR+GIGTELV+ACEDAC WG+DN+YLKV GN AAEKLY+NLGY ++ + N+V L G L RR R G+
Sbjct: 182 GVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTSDKPNDVMLCGDLRARRRREVAGA 279
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: A0A7S2SMQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMQ9_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.330e-13 Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = -1
Query: 364 RPYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYA 540
RPY+SDL V FRR GI L+R CE C WG+ ++YLKV+A N AA +LY +LGYA
Sbjct: 130 RPYMSDLTVCPLFRRRGIAKSLIRYCEAVCVSWGYPSMYLKVDASNEAAFRLYSSLGYA 188
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: A0A7R9UCL9_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCL9_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.050e-12 Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = -1
Query: 349 RPYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEHAPK 540
RPYLSDL VA+ +RR GI T LV+ E+ C WGF++++LKV+ N A +Y LGY +P+
Sbjct: 143 RPYLSDLGVAKSWRRCGIATALVKVSEEVCMAWGFEHMHLKVDQTNVVARNMYAKLGYRVTSPE 206
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: UPI001F552BC4 (GNAT family N-acetyltransferase n=2 Tax=Nostoc sp. FACHB-110 TaxID=2692834 RepID=UPI001F552BC4) HSP 1 Score: 69.3 bits (168), Expect = 3.460e-11 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = -1
Query: 358 PYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEH 537
PYLS+LAVA ++RR G+ ++L+ +CED C WG+ +LYL V N A +LY LGY H
Sbjct: 127 PYLSNLAVAHKYRRHGVASKLLTSCEDICREWGYQDLYLHVLEDNHQARQLYCKLGYRMH 186
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: A0A8J6CCI5_DIALT (N-acetyltransferase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI5_DIALT) HSP 1 Score: 67.4 bits (163), Expect = 1.620e-10 Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = -1
Query: 367 LSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGY 531
LS+L V R RR GI +LVR CED WGFD LYLKV A N+ A KLY+ LGY
Sbjct: 106 LSNLVVEPRARRRGIARKLVRKCEDEVRAWGFDKLYLKVEAPNSPARKLYEKLGY 160
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: A0A8J7DIP4_9CYAN (GNAT family N-acetyltransferase n=1 Tax=aff. Roholtiella sp. LEGE 12411 TaxID=1828822 RepID=A0A8J7DIP4_9CYAN) HSP 1 Score: 67.0 bits (162), Expect = 2.140e-10 Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = -1
Query: 316 PYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEHAPKNTNNEVTLRGS 537
PYLS+LAV ++RR G+G+EL+ +CE WGF +LYL V N A +LY LGY H ++ N LR S
Sbjct: 117 PYLSNLAVHPKYRRHGVGSELLISCEKVSQDWGFQDLYLHVLENNYQARQLYFKLGYRVHKVESNWNTYLLRRS 190
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: A0A7S4EDE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDE6_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.490e-10 Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = -1
Query: 367 GGYRPYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGY 549
G RPY+SDLAV +RR G+ T LV+ CE W FD ++LKV A N AA K+Y LGY
Sbjct: 227 GRPRPYVSDLAVREDYRRRGLATCLVQKCESIVKAWAFDRVFLKVEASNEAARKMYGELGY 287
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: UPI000B003ED3 (GNAT family N-acetyltransferase n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI000B003ED3) HSP 1 Score: 65.5 bits (158), Expect = 7.530e-10 Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = -1
Query: 358 PYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEH 537
PYLS+LA+A ++RR G+ + L+ CE C WGF +LYL V N A +LY LGY H
Sbjct: 117 PYLSNLAIAPKYRRYGLASSLLITCEQICQDWGFQDLYLHVLENNHQARQLYFKLGYRVH 176
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: A0A218QEF3_9CYAN (GCN5-related N-acetyltransferase n=5 Tax=Nostocales TaxID=1161 RepID=A0A218QEF3_9CYAN) HSP 1 Score: 64.3 bits (155), Expect = 2.670e-9 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = -1
Query: 358 PYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEH 537
PYLS+LAV ++RR+G +EL++ACE+ WGF +LYL V N A +LY GY H
Sbjct: 133 PYLSNLAVHPKYRRLGAASELLKACEEVALLWGFKDLYLHVLENNHQARQLYFKAGYQVH 192
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Match: M1X2H7_9NOST (GCN5-related N-acetyltransferase n=2 Tax=Richelia TaxID=98443 RepID=M1X2H7_9NOST) HSP 1 Score: 63.5 bits (153), Expect = 4.240e-9 Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = -1
Query: 325 PYLSDLAVARRFRRIGIGTELVRACEDACARWGFDNLYLKVNAGNAAAEKLYQNLGYAEHAPKNTNNEVTL 537
PYLS+LAV R++RR G+ ++L+ +CE WGF LYL V N A++LY LGY + + N+ T
Sbjct: 125 PYLSNLAVNRKYRRQGVASQLLNSCEQIAISWGFKELYLHVLEDNQQAQQLYFKLGYRIYTMDSHWNKFTF 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2093.6043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig2093.6043.1 >prot_H-elongata_contig2093.6043.1 ID=prot_H-elongata_contig2093.6043.1|Name=mRNA_H-elongata_contig2093.6043.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=131bp MGQSVSRVIKIRHPLRQKYIPSVHTSAITARSLPSLYSLVAASRGSSGSSback to top mRNA from alignment at H-elongata_contig2093:11902..12450+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig2093.6043.1 ID=mRNA_H-elongata_contig2093.6043.1|Name=mRNA_H-elongata_contig2093.6043.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=549bp|location=Sequence derived from alignment at H-elongata_contig2093:11902..12450+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig2093:11902..12450+ >mRNA_H-elongata_contig2093.6043.1 ID=mRNA_H-elongata_contig2093.6043.1|Name=mRNA_H-elongata_contig2093.6043.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=786bp|location=Sequence derived from alignment at H-elongata_contig2093:11902..12450+ (Himanthalia elongata Himel1 dioecious)back to top |