mRNA_H-elongata_contig20922.6040.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20922.6040.1
Unique NamemRNA_H-elongata_contig20922.6040.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A6H5KQB6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQB6_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.020e-52
Identity = 97/164 (59.15%), Postives = 122/164 (74.39%), Query Frame = 1 
Query:  550 GWKNPTPIFLGE-AYVSRLDKDAFDYYALSIPPALPDTPQESVIITSTPARGGLQDIYVTTDRTREPGPEDYVVKSTNWAGSMTVMFSETVSGYCSNCTIYVSVFGYKEGSYSIVASQGLTKLQEGIPQQGTVGGGNGSAQYYEFFNPPGGRQSIQVAVLRRSG 1038
            GW++P  + LG     S L +  FDYYAL I PA  + P ES+++T+TP  GG QD+Y TT+R+REPGPEDY VKS+NW GS T++FSET  G+C++CTIYV V+GYK+G YSIVASQGLT+LQEG PQQG VGG +   +YYEFFNPPG  +SIQV     +G
Sbjct:   15 GWRHPQQLLLGNHPQSSFLVEGNFDYYALLITPAPEENPWESIVVTTTPTGGGQQDLYATTNRSREPGPEDYDVKSSNWVGSSTLVFSETAPGFCTDCTIYVGVYGYKKGGYSIVASQGLTRLQEGFPQQGLVGGED-DWKYYEFFNPPGHGKSIQVVATALTG 177
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A4D9CYF0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYF0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.070e-42
Identity = 103/313 (32.91%), Postives = 155/313 (49.52%), Query Frame = 1 
Query:  145 SRYKIVVASDEDVLQLESGLPIRMIQDKGEMRYFSIDIEVNATDLLVSLNPYFGDPDMYMSLYETPEEMADHVLPTKENFTWHSISFGADTIQVQGEILSENCAPDMKAGKPCTYVIGVLAGSNCSYAIQASLRSGWKNPTPIFLGEAYVSRLDKDAFDYYALSIPPALPDTPQESVIITSTPARGGLQDIYVTTDRTREPGPEDYVVKSTNWAGSMTVMFSETVSGYCSNCTIYVSVFGYKEGSYSIVASQGLTK--LQEGIPQQGTV-------------GGGNGSAQYYEFFN------PPGGRQSIQVA 1020
            S ++++  + +  L L  G+ +R         ++ + +     DL ++L P  GDPD+Y+ +   P  M     PTK N TW S SFGAD++ VQ   L  +C PD   G  C   +GV A S  S++I ASL +GW NP+ +  G      + K A+ YY   IP  +    +  V IT  P     QD+YVT    +EPG E++  +ST+W+ +  V+ +     YC+ C++YV+V+GY  G YS+VA+   T+  LQ G+P +GTV             GG  G  Q  E F       P  GR  +  +
Sbjct:  503 SEFRLLAKTLDSTLTLHDGVAVRDTVAAKAYAWYKVLVVNPQLDLTLALTPLSGDPDLYVGV---PPVMR----PTKGNHTWASRSFGADSLTVQAAELRGHCEPDPSIGVGCPVYVGVYAWSRASFSIMASLNTGWLNPSVLIPGLPQSGEVAKSAYHYYQFRIPAGVDGAVEPLVRITLLPEDDTDQDLYVTFSAEKEPGKENFDARSTSWSDNDEVLLAPGGPHYCTGCSVYVAVYGYDAGPYSLVATLSTTQQQLQLGVPVRGTVAAASSSFYVVDWQGGSEGGGQGGEAFGLAVTLTPEAGRPQVYAS 808
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A7S1C2U3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2U3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.650e-33
Identity = 89/283 (31.45%), Postives = 140/283 (49.47%), Query Frame = 1 
Query:  139 SVSRYKIVVASDEDVLQLESGLPIRMIQDKGEMRYFSIDIEVNATDLLVSLNPYFGDPDMYMSLYETPEEMADHVLPTKENFTWHSISFGADTIQVQGEILSENCAPDMKAGKPCTYVIGVLAGSNCSYAIQASLRSGWKNPTPIFLGEAYVSRLDKDAFDYYALSIPPALPDTPQESVIITSTPARGGLQDIYVTTDRTREPGPEDYVVKSTNWAGSMTVMFSETVSGYCSNCTIYVSVFGYKEGSYSIVASQG--LTKLQEGIPQQGTVGGGNGSAQYYEF 981
            S S + IV AS +D++ L+ G+P      K +  ++ + +  + TDL ++L P+ GDPD+Y+S      E         +  TW S SF  + + +Q   L E+C  ++  G  C   + V   +N SY++  SL      P  +  G      +    + YY   +      T    V ++ TP+ G   D+YVTTD T  PG   Y   ST++ G   V      +  CSNC ++++V+GY E  +S+  SQG  +T+LQ+G+PQQG VG  +    YYEF
Sbjct:  651 SGSDFSIVGASADDIITLQDGVPQEGAVFKQQYEHYRVIVAEHGTDLQLTLTPFSGDPDLYVS------ETVPRPTRDADGHTWRSFSFHEENLIIQYSEL-EHCQQEIGRGGQCEVYVSVYGYTNTSYSLVPSLDQSSNRPVVLIDGSPQQGSVGLHEYAYYIAHL-----GTMSSPVTVSVTPSTGDA-DLYVTTDGT-VPGKNHYAYSSTHFGGEDRVTIQPGDAAACSNCNVFIAVYGYTEAEFSVTYSQGTSVTRLQDGVPQQGRVG--HMEYNYYEF 917
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A7S1C2L0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2L0_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.070e-22
Identity = 83/301 (27.57%), Postives = 140/301 (46.51%), Query Frame = 1 
Query:  130 NATSVSRYKIVVASDEDVLQLESGLPIRMIQDKGEMRYFSIDIEVNATDLLVSLNPYFGDPDMYMSLYETPEEMADHVL---PTKENFTWHSISFGADTIQVQGEILSENCAPDMKAGKPCTYVIGVLAGSNCSYAIQASLRSGWKNPTPIFLGEAYVSRLDKDAFDYYALSIPPALPDTPQESVIITSTPARGGLQDIYVTTD------RTREPGPEDYVVKSTNWAGSMTVMFS-ETVSGYCSN----CTIYVSVFGYKEGSYSIVA--SQGLTKLQEGIPQQGTVGGGNGSAQYYEFF 984
            +    S + +  ++ +D++ L++G+P R   ++G+  YF   +    +D+++S+ P+ GDPD+Y+S   T  +    V    PT  ++ W   ++GADT+ +        C P  +A   C + IGV   +  S+ I A L      P  +  G      +++   + Y L + P   D     + IT TP R G  D+YV T       R R PGP  Y  +S +  G   V    +  +  C +    C ++++V GY+   ++IVA  S   T LQ G+P + TV      A  YE+F
Sbjct:  835 DGVGTSSFSLTASTTDDLVLLQAGVPFRDYVEQGQHEYFVFSLHDEHSDVVISVTPFTGDPDVYVSACGTLADGTASVCNDRPTNTSYQWAHRAYGADTLAIPWAA-DGACVPSAEAS--CDFYIGVYGYTASSFTIMAYLHD--VRPVQLVDGVPQSGAVNQSVSEQYILLVEPGHTD-----IEITLTP-RFGDADLYVLTSDGNDPSRDRIPGPNVYDYRSIHATGDDHVHIGVDDDNNNCRSVNVPCRVHIAVHGYRPSQFTIVATSSHAATTLQAGVPLRDTV-----PANSYEYF 1119
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A482RVW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVW8_9ARCH)

HSP 1 Score: 103 bits (256), Expect = 2.130e-20
Identity = 70/208 (33.65%), Postives = 101/208 (48.56%), Query Frame = 1 
Query:  397 ISFGADTIQVQGEILSENCAPDMKAGKPCTYVIGVLAGSNCSYAIQASLRSGWKNPTPIFLGEAYVSRLDKDAFDYYALSIPP---ALPDTPQESVIITSTPARGGLQDIYVTTDRTR-----EPGPEDYVVKSTNWAG-SMTVMFSETVSGYCSNCTIYVSVFGYKEGSYSIVASQ-GLTKLQEGIPQQGTVGGGNGSAQYYEFFNP 990
            ++ G D   +Q E L+  C P+   G+ C   +GV   SN SY+I A    G+ +P+ +  G     R+   A+ YY   +      L       +  + TPA GG  D+Y+           EPG ++Y  KST W+  S ++  S  + GYC NC +Y++VFGY EGSY+I AS  GL  LQ      G V       +YY F+NP
Sbjct:  635 MNVGEDDYTIQYEELTRYCTPNPSLGRRCDIFLGVYGWSNSSYSITAYTEDGFLSPSLLLDGLPENGRVKTGAYRYYKYLVSVESNGLVTNMPLDIKFSLTPAEGGDVDLYIKFGNQSALPIFEPGKDNYDYKSTGWSSVSESIEVSYGMPGYCVNCVVYLAVFGYTEGSYTIQASSTGLLTLQTNTAIGGHVE--RDIFKYYTFYNP 840
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A6H5KRK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK9_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.030e-19
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 1 
Query:    1 VQVYASSGGKIPTVNENDWVGNGVVRLRGWDVPRDGDTLTVAVNATSVSR--YKIVVASDEDVLQLESGLPIRMIQDKGEMR 240
            V+ YASS G+ PT +E+DW G  V+RL GW VP +GDT+ V + AT  +   Y+++ ASDEDVL+LE G+P++M+QD  EMR
Sbjct:  103 VETYASSSGREPTPSESDWSGGRVLRLPGWSVPHEGDTVVVMIKATGTAGALYRVLAASDEDVLRLEDGMPVQMLQDASEMR 184
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A836CJK6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJK6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.590e-19
Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 1 
Query:  673 VIITSTPARGGLQDIYVTTDRTREPGPEDYVVKSTNWAGSMTVMFSETVSGYCSNCTIYVSVFGYKEGSYSIVASQ--GLTKLQEGIPQQGTVGGGNGSAQYYEFFNPPGGRQSIQVAVLRRSG 1038
            V IT TP  GG  D++VT  R REPG   Y V+S  W GS   +F+E    YC+ CT+Y++V G++ G++SI      GLT LQ G+P  G +   NG+++YY   +P G R  ++V +   +G
Sbjct: 1040 VAITVTPTDGGDTDVFVTASRDREPGQHSYDVRSQAWTGSDVAVFAEGAPNYCTGCTLYIAVKGFRGGAFSITGEVDGGLTLLQAGLPVAGAIV--NGTSRYYVLHSPEGARDIVEVRLTSLTG 1161
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BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Match: A0A8J5XRT0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRT0_DIALT)

HSP 1 Score: 62.4 bits (150), Expect = 7.450e-7
Identity = 44/145 (30.34%), Postives = 67/145 (46.21%), Query Frame = 1 
Query:  121 VAVNATSVSRYKIVVASDED-VLQLESGLPIRMIQDKGEMRYFSIDIEVNATDLLVSLNPYFGDPDMYMSLYETPEEMADHVLPTKENFTWHSISFGADTIQVQ-GEILSENCAPDMKAGKPCTYVIGVLAGSNCSYAIQASLRS 549
            + V A   S Y I    DED   +L  G P       G+   + + +   A  L VS+ P+FGDPD+Y++        +D   PT  N+ + S   G+D + VQ G   +  CA        CTY +GV A +  ++ +QA+  S
Sbjct: 1774 IGVTAFENSTYTITALVDEDSCARLVGGQPQAGSLAAGDWGCYEVPVSERANRLTVSITPFFGDPDLYVT--------SDGTRPTSLNWHFRSSHVGSDEVSVQVGAGGAHACAG-------CTYTVGVYAFTATNFTLQATTSS 1903
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20922.6040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KQB6_9PHAE1.020e-5259.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CYF0_9STRA2.070e-4232.91Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1C2U3_9STRA2.650e-3331.45Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1C2L0_9STRA8.070e-2227.57Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A482RVW8_9ARCH2.130e-2033.65Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6H5KRK9_9PHAE1.030e-1952.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJK6_9STRA3.590e-1940.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J5XRT0_DIALT7.450e-730.34Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20922contigH-elongata_contig20922:401..6814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-17_003350.1
Exons7
Model size1038
Cds size1038
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930169.7859924-CDS-H-elongata_contig20922:400..5141622930169.7859924-CDS-H-elongata_contig20922:400..514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 401..514 +
1691679307.2220104-CDS-H-elongata_contig20922:400..5141691679307.2220104-CDS-H-elongata_contig20922:400..514Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 401..514 +
1622930169.8057475-CDS-H-elongata_contig20922:954..10791622930169.8057475-CDS-H-elongata_contig20922:954..1079Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 955..1079 +
1691679307.240808-CDS-H-elongata_contig20922:954..10791691679307.240808-CDS-H-elongata_contig20922:954..1079Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 955..1079 +
1622930169.8221846-CDS-H-elongata_contig20922:2345..25351622930169.8221846-CDS-H-elongata_contig20922:2345..2535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 2346..2535 +
1691679307.2517176-CDS-H-elongata_contig20922:2345..25351691679307.2517176-CDS-H-elongata_contig20922:2345..2535Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 2346..2535 +
1622930169.836398-CDS-H-elongata_contig20922:3080..31851622930169.836398-CDS-H-elongata_contig20922:3080..3185Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 3081..3185 +
1691679307.2685566-CDS-H-elongata_contig20922:3080..31851691679307.2685566-CDS-H-elongata_contig20922:3080..3185Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 3081..3185 +
1622930169.8546293-CDS-H-elongata_contig20922:4650..48271622930169.8546293-CDS-H-elongata_contig20922:4650..4827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 4651..4827 +
1691679307.2775216-CDS-H-elongata_contig20922:4650..48271691679307.2775216-CDS-H-elongata_contig20922:4650..4827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 4651..4827 +
1622930169.8722818-CDS-H-elongata_contig20922:6086..61991622930169.8722818-CDS-H-elongata_contig20922:6086..6199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 6087..6199 +
1691679307.2903645-CDS-H-elongata_contig20922:6086..61991691679307.2903645-CDS-H-elongata_contig20922:6086..6199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 6087..6199 +
1622930169.8880002-CDS-H-elongata_contig20922:6600..68141622930169.8880002-CDS-H-elongata_contig20922:6600..6814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 6601..6814 +
1691679307.30174-CDS-H-elongata_contig20922:6600..68141691679307.30174-CDS-H-elongata_contig20922:6600..6814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20922 6601..6814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20922.6040.1prot_H-elongata_contig20922.6040.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20922 401..6814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20922.6040.1

>prot_H-elongata_contig20922.6040.1 ID=prot_H-elongata_contig20922.6040.1|Name=mRNA_H-elongata_contig20922.6040.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=346bp
VQVYASSGGKIPTVNENDWVGNGVVRLRGWDVPRDGDTLTVAVNATSVSR
YKIVVASDEDVLQLESGLPIRMIQDKGEMRYFSIDIEVNATDLLVSLNPY
FGDPDMYMSLYETPEEMADHVLPTKENFTWHSISFGADTIQVQGEILSEN
CAPDMKAGKPCTYVIGVLAGSNCSYAIQASLRSGWKNPTPIFLGEAYVSR
LDKDAFDYYALSIPPALPDTPQESVIITSTPARGGLQDIYVTTDRTREPG
PEDYVVKSTNWAGSMTVMFSETVSGYCSNCTIYVSVFGYKEGSYSIVASQ
GLTKLQEGIPQQGTVGGGNGSAQYYEFFNPPGGRQSIQVAVLRRSG
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mRNA from alignment at H-elongata_contig20922:401..6814+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20922.6040.1 ID=mRNA_H-elongata_contig20922.6040.1|Name=mRNA_H-elongata_contig20922.6040.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6414bp|location=Sequence derived from alignment at H-elongata_contig20922:401..6814+ (Himanthalia elongata Himel1 dioecious)
GTGCAGGTGTACGCCAGCAGCGGTGGCAAGATCCCCACGGTGAACGAGAA
CGATTGGGTGGGGAACGGCGTGGTGCGCCTTCGAGGGTGGGACGTGCCGA
GAGATGGGGACACGGTGAGATTTTCCCGCAAAGCTGCCTCGCCACGTTCG
CAGCAGTCGCAACCCAGAGAGACAGTGCAGTGCACCAAGATATGAAAACG
CCTCCACCGCAGCTGTTCGTCCTGTTGTATTTCTGAGGATCCGTGCGCGC
TTCCTTTGGCCTCTGGCTGCCTCTTTTCTTTACGTAAACCGACATGGTTG
ATGCATGCTGGTAGTTTGGTGTGTGTTAAAAATATTTGTATCTTTTTTAG
CGATGTCACACACATCCTCTGTATAAAAAAGACACTACATGTATATTCTA
TCCCCATTATTCGAAGAGAGGGCGTGTGCGGGAGTTTCTTTACATTGGTC
AAGATCGCCCCCCCCCAGCGCACCGCTCAGCATGCGTACCCTAGTGCTCG
CCTTTTCCCTCTGACCTTCTGTTAGCCCGCATCCCCGTGTATCCCACGCT
CCAGCTCACGGTTGCGGTGAACGCGACGAGCGTGTCGCGGTACAAAATTG
TGGTAGCGAGCGACGAGGACGTGCTGCAGCTGGAGAGCGGGCTTCCTATT
CGGATGATCCAGGACAAGGGCGAGATGCGGTGAGGACGAAGACGGGCCAT
GGTTGTGTGCGCCCTGTCTGGGAAAAGGAGACGGGGGAAAGCTATCACAG
CCCCCCCCATCCATCCCCTTTCCTCCCCTTTCCCTTCCCCCGTCCCCGCT
TTTTTCGACGACTTCTGCTCCGTCTCCGTTCGAGGGGAAGTATGTCACAG
GCGATAAGTGTCTTGTAAGCAGAAGAGAGCCCCCGAGAATGGACGATGAA
CGTCCCTGATCGATAGTCTGCGTCCTCAGGAAAGCAATGGTCAACGTTGC
GAATTTTGCCAATATAGTACAGGCGTCTTGTCAAAAAACAAAACAAAAAC
GTTCGACGTTGGTACAGAGACCTAATGCCCAGAAACGAGCGTTATCTAGG
TTGGGGGGGAGGGAGAGGGATGCTTAAATTTTACCTGCCTTATTTGTTAG
CTCACTGAATTCTGACAACGCTCCCTCGGCTAGATTCCGAATATGTGTGT
TTTGAGGTCCTTCATCGTCCACGGTACGTGTAGTCGCGCGGAGATTCCAT
TACCGGTTCGTTTCGAGGTACACGGACTTGTGAATAGATCGAAGCTGTGG
AACAAGGTGCCGGAAATCGCCGTCGTGATTGTGAAAGAGCGGCTCAAACG
AGAATATTTTACTCATGCCTCGTCGGGAGAATTATAATACAAGTATATAC
GAAGTATATATATATATATATATCCCCCCTTCCTATGGAGTTTATGTAGT
GTTAGTGTGTGTTCTGTGAGCTCAGAGACCTTGCTCGAACAGTCTTGTCT
TTCCCCAAAGGTTTAAAAGGTATCACACTCGAGAGGACACATGGTGAACA
ATGAAGTTTTGGAAAGCCCTACTGCAGAGATAGACTTTTATGAGAGTACT
CCGTCAGGATTTTTCACGATACCGTTATGAGTGTGGTATGCTGCATGCGT
TCGCGCGGAGACCAAATTTCCTTTTGCGGTACTTGGGAGTATGGAGCTAG
TTCCGCCCACAAAATGTGCCACATTTGATTACAGCATCCGGTGTGTCCAG
TGTTAAGTTATAGCCCATGGTATGTGACATGTCCGGTTTGGCGTAGCAAA
CGCAAGGATAATTACTAGAAGCTAGTATCATCCTATTATTAGTGAGGCGC
AGTCTGGCCCTCGAAAATTATGTACCCTATCGCTTTGTCCTGTCCTTGTT
GGAAAATATGCCTATTAATAGTCTATGTTCGTTAGTATACGACATGTCTT
CAATATACTGGAAGTACACCCCCCCCCCCTCCCTTTCGACCCCAGGTACT
TCAGCATCGACATCGAGGTAAACGCGACGGACCTGCTGGTGTCCCTCAAT
CCATATTTCGGAGACCCCGACATGTACATGTCTCTCTACGAAACCCCGGA
GGAAATGGCGGACCACGTCCTCCCGACCAAGGAAAATTTCACGTGGCATT
CTATCAGCTTCGGCGCCGACACGATCCAAGTGCAGGTACGGCACATCCCG
CAGGAGTTTTATTTTTTGTGCAGCCGTTTTGCGCAGGCGTCAGGCGGCAG
TCGTCACCGTGTCCCGCTACAGAAAATAGCTACACCATGCACACACAGAC
ACACAAAACCAAAGACGAAAAATGATACAAAACCCAATACTTTTTACATG
TCGGTGGGTGAGTAGGTGGTGGGTGGGTTGCCGAGGGGGCTGTTGTTGTT
TTGAGTGGCGAGCGAGCGACTGCCGTTGCCCCGTTTCCAAAGCCGAAGGC
ACCAGGGACGGCGATGTTAGGCTACTGCCACGCTGAACCGTAGCCTGCCT
TTTCGAGAGCGATCTGATTCGTGGCCGACCTCTAGTATTCAGCCAAACAC
AAGCAGGAGGCAGCAACCAAATCCGGATGATCTTTACTCTGTTATACGTG
ATGACGTCATTACCACACAGTGTGATGTATAAGGATTACATAAGAATTGT
CGTCTTAGACATGTAATATTTTAACTCCCCGCCCCCCCAAACGCCGCTCA
TGATGTTCTTAATGCGCGCTTCGGCGGCAGGGCGAGATATTGTCCGAAAA
CTGCGCGCCCGACATGAAGGCAGGCAAGCCTTGTACCTACGTGATCGGAG
TCCTGGCGGGGTCCAATTGCAGCTACGCCATCCAGGTGCGCGACAGGGTT
ATTCTGTTGCACGCGTAGGTAAATTGCGCACCTGTAGCTGCGTACTACCG
GTACTGCGGAGGTAATATCCACCCGTGTTTTTAGAAATCATTCATAGTAT
TGTTAGTAATACAAATGCCATACGTGGCCACGCCTTCCTGTATCCACTTT
TCCCTGCCTTCTTGACCCCACCCTTCTAATTAATAGTAGCTAACGATGTT
TGCTGTGGTTCCGATAGTTAGTTACCCTGCGTAATCAGGAGTCCCCCCCC
CCCCTCCCATTCATTTTACCTCGGGTTTCCTAGAGATAATGTCTTCCTAA
TACTAGCTACAATCAATCCGAAATCAATCGAGCTATATGTACAATGCAAC
CACATGCTGAACTTACCTATACCCTCTAAAAAATATATACTGACTTAAAT
ATCTTCATAACTTCTATGAGGACTGATCAATGTATCTATCCCACAGCTCA
TAGAGTCACGTATTTTCCCCCTTTTTTGTCTCTCTTATTATTAGTATACA
GTCCACTCTCTAGGCTATGCTATAGTTTGGTTTGACGTCCCCACATGAAG
AATAATGTGAAGTGTACGGGATAATAATGGGATCCATCCCTGACATTATT
CCGTTAACCCGATGAACTCACTATTGGGAACACGATTTCTCACGTGTGAC
GATTTTGTGCTCAAAAATAGTAATGTCCAACTGACGAGGAGGGAACGAGT
TTGTCTCGTTGAGGGTGCGTATTGATTTCCCACGACACGTTTTGCCGCCA
TGCTTGAGAAAACGAGGAGGGCGGAAGATGGGGGGGGGGAGGGGGAGGAG
GTTGCCTAAGTATTGTACCTGGGCGAGATGCTTCTGGTACTTGCGGAGGA
AATTTGACGGTCGTTTATTTTTTTCCCGCGAGGTTTAACGCTGACGAGGA
TATCGTGCGGCGATTCTTATCGCGGGCGTCTACAGGGCCGGTCATCGGAC
GGAAGCTGCAACAATCGTGACCCGATTACCGTGGAACCTTCTTCCTCTTC
CTCTCGGCGGCTGTTGCTTAAAGCCTTAAAGCCTTAAAAGCACACGCGTG
TGATACATCTCTATGTATCTATGTTTGTGTCTGTTTTGTCTCGGCCTTTC
TGTCGTTCTGACTGTCTACATCACTGTCGATGCCTCGGCTTGTTACTCTC
ACTCTATTTCGCTTGTCTTTTTTCACTTCATTTTGGCAGAAAAGGTTCCT
CTGCGCGGTACGTGACGTCATTTCCGTACCATGCCTTGCCATCCGTCGTT
GCCGAACCAACGAGAACTTCCAACACCGGGAGAAAACAAAAACTAACTGC
GCCGCACGCCACCCGCCCCCCCCTTTCTCCTCTCAAGCAAAACCATCGCT
CGCGTCAATAGCGCACCCGGGCCACTGATAGAACCCGTTTCGCTGACACT
CCTGCTGCGATCGAACAACGCACTCTTGGGTAAAAAAACGGCGGCAGCAG
GCGTCCCTGAGGTCCGGGTGGAAGAATCCGACCCCCATATTTCTCGGGGA
GGCGTACGTGTCTCGGCTGGACAAGGACGCGTTCGACTACTATGCCCTCT
CCATCCCGCCCGCGCTCCCGGATACTCCCCAAGAAAGCGTCATAATCACG
TCAACACCGGCTAGGGGCGGCCTACAGGTGGGTGTCCAATCGGGTCATGA
GTGAGTTACTCGTCTCTGTATTGATTGAAGGAAATATCATTGGTATATTG
GTGTATGTATTATCATTTAAAGTATGTTATTAGAGCCTTCATTTCTAATA
CTCTAGAGTGCTGGCCGGGGCGGGGAGAGTGAAGGGGGGTATCGGGCTCA
AAAATAAATGCTGTACTGACCAGGGGAAGTACGGATATCATCCCCGTGTT
TTAACTGTGGTGAAAAATAGTTTGTCTAAGGCTCTTATTTTTATTAAAAC
AAGGGTCTTATTCATCCATTCTCTTACGGCAGCAGCACCCCCCCCCCTCC
CTCCCCCCGCATATAAAACTGTCACACGCCCTCAAGAACAATCGTACAAG
TTCGTCCTTTTCCGCTCTGGAGGTTGTCAGCTTTTTGTCTTCAGCCGCTC
GGCAGTATTTTCAGTCGCAGACATGATCCCCAGGAGAAATTAAATTAGAC
TGCCTTGTAACGGGGTATCCCACAATTGAGCGAGCTCGGTTTACTGTTGT
GCGCGGTGCTGTGGTGGGGAGGCCAAGCTTTCCGACTTTCAGAAAGCGCG
GTTTCGAGGGTTTCCAGTGATATCGCGGTGATGAATATGTTGGGGAAGAA
AAAAAATGGCTTGGAAAATTCGTCCAGTAGCAAGCGGAAGTGATCCCGCG
AAGGGCTTGTATTTCGGACCAGAGTGGTACCTGGTTTCTGTAGATTTATA
CCGTATATATATATATATATATATATCTGTGTGAATTATACAGATACAGT
CAGGCACTGCGCCCGCGTCTTTGAAGACGATCTGCGTGGAGGAAAATTAG
GCGTTAAATTCAGTGGCTGAAAGACACAAATGGCGTACGGAAGGCCTCGC
ATTATATGTCAAGCACAATCACACGTGCGCACGCATGAGATATGGCGTGT
CATGTATACAACATGAGTGTGCGAGCGTCCCCCCCGTCTCTTAGTCATCT
CCCCCCCCAAGCTGACTAACCGGTGACGTGACGTGACGTGACTTGACTTG
ACGTCTTATTTTCCGAAGAGAGGTTGGGGGGGGGGGGAAGCTTTTTGCTT
CTGCCCCCTACTTATTGGAAGCTTAGTATCAGATAGGAGAGGGAAAGCGA
GCGGCTATTGTTGTACGCACATATCGAGAGTAGTGTTTGTGTGCCCTTCG
TTAAAGTTTGAAGTGGCAGCAGAATTTATGTCGTTTGCGATTGCTGTTGT
GTGCAATGTACAATGCGCGGTGGGCCTTCACGCTAGGATATCTACGTCAC
AACCGACCGGACGCGCGAGCCCGGTCCGGAGGACTATGTTGTCAAGAGCA
CGAACTGGGCGGGGTCCATGACGGTGATGTTTTCGGAGACAGTGTCAGGG
TGAGGAATGGACGTGCACGTTGGGTTGCACGGGTCGTTCGAGTGCAGTAT
CGATCGCGAGCGGCGCCGCAACCGTCGAGCACAGCAAGCGCAGACGTTGA
AGACGGCAACTGATTTTGAATTACATAAAGGTGGCGTTTCTTCGGAGGGA
GGGGGGGGGTGACTAACGCACCTCGAGTGATTCTTGAGATAAATGTTGCT
GGTGTTCCGGTGTGAGCTCGACCGACACGAGAGCCTTCCTTAAATGGCGA
GGTTTTGTGAGGCCGCCTGCTTTTTTAGCTCTTCAGGGGCATTACCTGGC
AGCAGGCAGCAGTAACGTTTGTTTATTCGATCGGCGCGGAAGCGTGTCTA
GTACCACCATAGCCTTTGTTTCGTGCCAATGGTTCCCCCGCTCGGTTCAG
GTACTGCTCGAACTGCACGATTTACGTGAGCGTGTTCGGGTACAAGGAGG
GGTCCTACTCTATCGTGGCCAGCCAGGGCCTCACTAAGCTGCAGGAAGGC
ATTCCCCAGCAGGGGACGGTGGGGGGAGGAAACGGGTCTGCACAGTACTA
TGAGTTCTTCAACCCGCCAGGAGGCCGTCAATCCATACAGGTGGCCGTTT
TGCGGCGTAGTGGT
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Coding sequence (CDS) from alignment at H-elongata_contig20922:401..6814+

>mRNA_H-elongata_contig20922.6040.1 ID=mRNA_H-elongata_contig20922.6040.1|Name=mRNA_H-elongata_contig20922.6040.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2076bp|location=Sequence derived from alignment at H-elongata_contig20922:401..6814+ (Himanthalia elongata Himel1 dioecious)
GTGCAGGTGTACGCCAGCAGCGGTGGCAAGATCCCCACGGTGAACGAGAA
CGATTGGGTGGGGAACGGCGTGGTGCGCCTTCGAGGGTGGGACGTGCCGA
GAGATGGGGACACGGTGCAGGTGTACGCCAGCAGCGGTGGCAAGATCCCC
ACGGTGAACGAGAACGATTGGGTGGGGAACGGCGTGGTGCGCCTTCGAGG
GTGGGACGTGCCGAGAGATGGGGACACGCTCACGGTTGCGGTGAACGCGA
CGAGCGTGTCGCGGTACAAAATTGTGGTAGCGAGCGACGAGGACGTGCTG
CAGCTGGAGAGCGGGCTTCCTATTCGGATGATCCAGGACAAGGGCGAGAT
GCGCTCACGGTTGCGGTGAACGCGACGAGCGTGTCGCGGTACAAAATTGT
GGTAGCGAGCGACGAGGACGTGCTGCAGCTGGAGAGCGGGCTTCCTATTC
GGATGATCCAGGACAAGGGCGAGATGCGGTACTTCAGCATCGACATCGAG
GTAAACGCGACGGACCTGCTGGTGTCCCTCAATCCATATTTCGGAGACCC
CGACATGTACATGTCTCTCTACGAAACCCCGGAGGAAATGGCGGACCACG
TCCTCCCGACCAAGGAAAATTTCACGTGGCATTCTATCAGCTTCGGCGCC
GACACGATCCAAGTGCAGGTACTTCAGCATCGACATCGAGGTAAACGCGA
CGGACCTGCTGGTGTCCCTCAATCCATATTTCGGAGACCCCGACATGTAC
ATGTCTCTCTACGAAACCCCGGAGGAAATGGCGGACCACGTCCTCCCGAC
CAAGGAAAATTTCACGTGGCATTCTATCAGCTTCGGCGCCGACACGATCC
AAGTGCAGGGCGAGATATTGTCCGAAAACTGCGCGCCCGACATGAAGGCA
GGCAAGCCTTGTACCTACGTGATCGGAGTCCTGGCGGGGTCCAATTGCAG
CTACGCCATCCAGGGCGAGATATTGTCCGAAAACTGCGCGCCCGACATGA
AGGCAGGCAAGCCTTGTACCTACGTGATCGGAGTCCTGGCGGGGTCCAAT
TGCAGCTACGCCATCCAGGCGTCCCTGAGGTCCGGGTGGAAGAATCCGAC
CCCCATATTTCTCGGGGAGGCGTACGTGTCTCGGCTGGACAAGGACGCGT
TCGACTACTATGCCCTCTCCATCCCGCCCGCGCTCCCGGATACTCCCCAA
GAAAGCGTCATAATCACGTCAACACCGGCTAGGGGCGGCCTACAGGCGTC
CCTGAGGTCCGGGTGGAAGAATCCGACCCCCATATTTCTCGGGGAGGCGT
ACGTGTCTCGGCTGGACAAGGACGCGTTCGACTACTATGCCCTCTCCATC
CCGCCCGCGCTCCCGGATACTCCCCAAGAAAGCGTCATAATCACGTCAAC
ACCGGCTAGGGGCGGCCTACAGGATATCTACGTCACAACCGACCGGACGC
GCGAGCCCGGTCCGGAGGACTATGTTGTCAAGAGCACGAACTGGGCGGGG
TCCATGACGGTGATGTTTTCGGAGACAGTGTCAGGGATATCTACGTCACA
ACCGACCGGACGCGCGAGCCCGGTCCGGAGGACTATGTTGTCAAGAGCAC
GAACTGGGCGGGGTCCATGACGGTGATGTTTTCGGAGACAGTGTCAGGGT
ACTGCTCGAACTGCACGATTTACGTGAGCGTGTTCGGGTACAAGGAGGGG
TCCTACTCTATCGTGGCCAGCCAGGGCCTCACTAAGCTGCAGGAAGGCAT
TCCCCAGCAGGGGACGGTGGGGGGAGGAAACGGGTCTGCACAGTACTATG
AGTTCTTCAACCCGCCAGGAGGCCGTCAATCCATACAGGTGGCCGTTTTG
CGGCGTAGTGGTGTACTGCTCGAACTGCACGATTTACGTGAGCGTGTTCG
GGTACAAGGAGGGGTCCTACTCTATCGTGGCCAGCCAGGGCCTCACTAAG
CTGCAGGAAGGCATTCCCCAGCAGGGGACGGTGGGGGGAGGAAACGGGTC
TGCACAGTACTATGAGTTCTTCAACCCGCCAGGAGGCCGTCAATCCATAC
AGGTGGCCGTTTTGCGGCGTAGTGGT
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