mRNA_H-elongata_contig2091.6034.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: D7G7W1_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W1_ECTSI) HSP 1 Score: 336 bits (861), Expect = 2.240e-111 Identity = 181/314 (57.64%), Postives = 231/314 (73.57%), Query Frame = 1
Query: 1 MLEVLEEDHEFDLAGSARVDVLVSSIQPKQASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLLSSPEAYHAMIESKGQDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDP------GVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
MLEV++EDHEFDLAGSAR+DVLVS+I+P+QASQ++K+LS LLPL KL+HL+R+RSS+ P TG R LQVLLS P+ YHA+ E+K +++ ER+ L PT+HAVP+LEPRTR QF +G SAWPM+FHHSTSEEARRAAR+IPEQ+ L+A FMR+AL DA+ GR Q GG+ VGAV+VDP GRVVATA++ERQ++RDE P SMR+HPLHHAVMLCVQ VGR + AG+ + ++ + +A G + G R G+E + C D VV++LS QYLCTG DLY+T+EPCLM
Sbjct: 1 MLEVVQEDHEFDLAGSARLDVLVSAIKPRQASQVVKDLSELLPLERAKLNHLKRIRSSQHPETG-RLLQVLLSPPDMYHALDEAKRKEIVERYGLEPTVHAVPKLEPRTRAQFLSGGSAWPMIFHHSTSEEARRAARVIPEQDALDAIGFMRDALVDAETGRQQNGGRPTVGAVLVDPLGGCGGRRGRVVATASRERQKVRDEEPASMRDHPLHHAVMLCVQGVGRALAAGSRQEKVARKQEEDSA---------------GGKLGKEREGKGSESL-CSDAD-PPGGVVEVLSPEQYLCTGFDLYVTREPCLM 296
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: A0A3B4CVR8_PYGNA (Adenosine deaminase tRNA specific 3 n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4CVR8_PYGNA) HSP 1 Score: 104 bits (260), Expect = 4.030e-22 Identity = 92/318 (28.93%), Postives = 145/318 (45.60%), Query Frame = 1
Query: 1 MLEVLEEDHEFDLAGSARVDVLVSSIQPK-QASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLL------SSPEAYHAMIES--KGQDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQ-YLCTGLDLYITQEPCLM 924
+L VL ++ D + +D + I K + S+++KEL+V+ PL DL+ H++RVR+ KD L+V++ S E+ + + + ++ R P + +P P TR QFE WP FH + ++ E +M A++ A+ G A G AVGAV+VDP G++VA RQ HPLHHAVM+C+ V G E E + +P + + T +D ++E G S K + +GQ Y+CTG +LY+T+EPC+M
Sbjct: 20 VLPVLSDEQSRD---TKLLDAYAAPITEKRETSRLVKELAVVYPLPDLQ--HIKRVRARKDK-NAPHPLEVIVCLASDVSGLESQRSTLADLLSSKTIDSRGLGEPFLVQIPASPPLTRPQFERASKHWPTSFHEDKQVTSALRGQLFSSSEKAKMGEYMNAAIQAARSGH--ALGMDAVGAVIVDPQSGQIVAVGHDCRQG----------THPLHHAVMVCIDLVAYTQGGG----AYEYEKYPACRYSVP------------ESQVTTSHDDLSKE-------GNHCSSDKAMENGQLYICTGYELYVTREPCVM 296
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: A0A1S3FP72_DIPOR (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=4 Tax=Heteromyidae TaxID=10015 RepID=A0A1S3FP72_DIPOR) HSP 1 Score: 102 bits (255), Expect = 3.240e-21 Identity = 99/306 (32.35%), Postives = 140/306 (45.75%), Query Frame = 1
Query: 22 DHEFDLAGSARVDVLVSSIQPKQASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLL--SSPEAYHAMIES--KGQDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSND-GAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
D E LA +A V + +Q S+++KE+S + PL HL+RVR S+D +G+ +L++LL + P A + ++ R P + VP P TREQFE +S WP FH + A ++ QE M +A++ AQ + A G AVGAVVVDP GRV+AT Q PL HAVM+C+ V + G + +P+ A S P L +G + G +R D EE P Y+CTG DLY+T+EPC M
Sbjct: 78 DVELVLAYAAPV------LDKRQTSRLLKEISAVYPLP--AQPHLKRVRPSRDA-SGSHALEMLLCLAGPAAGTCSLAELLPKPAVDPRGLGPPFLVPVPARPPLTREQFEEARSHWPTSFHEDKQVTSALAGQLFSAQERAAMQRHMEQAIRAAQ--QALARGLQAVGAVVVDPATGRVLATGHDCSQVAS----------PLLHAVMVCIDLVAQ----GQGRGTYDFKPYP-ACSFTPATATL-----KGPQAGRVRKLDEDKEEDGLP-----------------YVCTGYDLYVTREPCAM 335
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: UPI001EAFFB27 (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=4 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFFB27) HSP 1 Score: 101 bits (252), Expect = 4.190e-21 Identity = 98/314 (31.21%), Postives = 136/314 (43.31%), Query Frame = 1
Query: 7 EVLEEDHEFDLAGSARVDVLVSSIQPKQ-ASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLLSSPEAYH-------AMIESKGQDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
E + ED D ++ VD V IQ K+ + I+K+LS LPL +L HL+RVRS K LQV++ S A A I SK L + P + VPQ P TR Q++ WP+ FH + + + +EV T M+ AL A++ R + GQAAVGAVVVDP V+A+A R+ + L HAVM+ V V G +T +++ + T S DG+ + G YLCTG DLY+T EPC+M
Sbjct: 24 EAVLEDRYTD--PTSLVDAYVCVIQDKKLTAHIVKKLSCDLPLTNLM--HLKRVRSHKAK--DAAQLQVIICSKSATEDSSVDILASIISKFPALGK-----PVLVKVPQNPPLTRNQYQDASKYWPVSFHEDKRVTSLLSGQFFSSREVRTIHTHMKTALHLAKVAREK--GQAAVGAVVVDPSTNTVIASAHDLRRGLNS----------LQHAVMVAVDLVAHGQGGGMWDTHDNDLKYRSTP-----------------DTATHPSTDGSTKT------------------GPYLCTGYDLYVTSEPCIM 279
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: A0A8C7Y795_9TELE (Adenosine deaminase tRNA specific 3 n=2 Tax=Oryzias TaxID=8089 RepID=A0A8C7Y795_9TELE) HSP 1 Score: 102 bits (253), Expect = 4.370e-21 Identity = 93/289 (32.18%), Postives = 129/289 (44.64%), Query Frame = 1
Query: 85 KQASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRS-LQVLL----SSPE----AYHAMIESKGQDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
K+ S+II EL+ L PL L+ HL+RVR+ KD G+++ L+VLL +P+ + +++ S G E P + +P P TR QFE W FH + +E T+M AL AQ + G AVGAVVVDP V R++A R R+HPLHHAVM+C+ V R GN + + LP KA + QE ++GA E Y+CTG DLY+T+EPC+M
Sbjct: 55 KETSRIIAELNSLYPLNGLQ--HLKRVRACKDK--GSQNPLEVLLCLVSEAPDVKAVSKDSLLPSSGAKWEG--LGEPFVVKIPARPPLTRPQFELASQHWSTAFHEDKHVTVALRGELFSTKEKAKMHTYMTSALTAAQAAKEL--GMEAVGAVVVDPEVDRIIAVGHDCR-----------RDHPLHHAVMVCIDLVARSQGGGNYCFDR----YTACQFSLP-------KAAKNQEMSN--QSEGAAEP--------------------YICTGYDLYVTREPCVM 291
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: A0A8C8Z6C4_PROSS (Adenosine deaminase tRNA specific 3 n=4 Tax=Lemuriformes TaxID=376915 RepID=A0A8C8Z6C4_PROSS) HSP 1 Score: 101 bits (251), Expect = 7.020e-21 Identity = 103/316 (32.59%), Postives = 136/316 (43.04%), Query Frame = 1
Query: 22 DHEFDLAGSARVDVLVSSIQPKQASQIIKELSVLLPLGDLKLDHLRRVRSSKD---------------PYTGTRSLQVLLSSPEAYHAMIESKGQDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
D E LA +A V + +Q S+++KE+S + PL HL+RVR S+D P TGT SL LL P ++ G P + VP P TR QFE ++ WP FH + A R+ EQE + M A++ A+ R A G AVGAVVVDP G V+AT D S + PL HAVM+CV V R G + PF + +P A + + GT+R D +E P Y+CTG DLYIT+EPC M
Sbjct: 39 DVELVLAYAAPV------LDKRQTSRLLKEVSAVYPLP--AQPHLKRVRPSRDTRGPHALEMLLCLAGPATGTCSLAELLPWPA-----VDPHGLG-------QPFLVPVPARPPLTRGQFEKARAHWPTSFHEDKQVTSALAGRLFSEQERAAMQSHMERAVQAAR--RAAAQGLRAVGAVVVDPASGHVLATG-------HDCSHAAS---PLLHAVMVCVDLVAR----GQGRGTYDFRPFPACSF-------MPLAASQAVQVGTVRKLD-EDEDSLP-----------------YVCTGYDLYITREPCAM 293
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: A0A2G8LBC6_STIJA (Putative inactive tRNA-specific adenosine deaminase-like protein 3-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LBC6_STIJA) HSP 1 Score: 99.8 bits (247), Expect = 3.620e-20 Identity = 86/310 (27.74%), Postives = 138/310 (44.52%), Query Frame = 1
Query: 85 KQASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLLSSPEAYHAMIESKGQDLEERFCLSP----------TMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENT-----------------EAEKEPFKTAASRLPRDGRLPGKAGRGQ---EKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
K+ S++IK+L L PL L H++RV+SS+ + LQ++L +P+ ++ +++E FC P T VP+ +P+TR QF Q WP FH + EV ++M AL A+ G + G ++GAV+V+P ++A+ RQ + ++PL HAVM+C+ V R G N + + +TA P + G + +K T +D + ++ N V+ S YLCTGL+LY+TQEPC+M
Sbjct: 33 KETSRLIKQLGELFPL--TSLSHVKRVKSSEK--IEGKQLQIILCTPDQLEN--DAPCTNIDEIFCTLPDFNKSGLGKLTCSKVPEYQPKTRAQFIEAQKYWPTAFHEDKELSRLLDGTFFSKTEVERINSYMNTALSIARRGGKE--GALSIGAVIVNPDSRDIIASCYDIRQ---------VSSNPLRHAVMVCIDLVARSQGGGAWNIHNTPGFYWKSPTCEALIKPDSSSRETAHHECPEAESSTNETGNTRHSPQKSTALVDDADQSNEPKNLKRKHNDEVQTSS---YLCTGLELYVTQEPCVM 322
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: UPI0001CBBE4D (probable inactive tRNA-specific adenosine deaminase-like protein 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBBE4D) HSP 1 Score: 99.8 bits (247), Expect = 3.620e-20 Identity = 90/314 (28.66%), Postives = 140/314 (44.59%), Query Frame = 1
Query: 55 VDVLVSSIQPKQ-ASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLLSSPEAYHAMIESKGQDLEERF---------CLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAG----------NENTE---AEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEE-VRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
V++L +SI +Q SQI+K LS L PL L HL+RV+S K +LQ+++ H+ +SK L++ F P + + PRTR+QF+ WP FH A ++ E +M +A+ A+ G+ + GQA +GAV+VDP V+A R++ HP HA M+C+ V G N+N++ A +E +++ S + + G K N E+ + V + +++ G YLCTG DLYIT EPC+M
Sbjct: 34 VNILAASITNRQDTSQILKSLSELFPLNGLH--HLKRVKSCKGETKNDVALQIIICLASDQHS--QSKHVSLKQIFGDKPFAGKGLGPPFLTKAAKFPPRTRQQFKDASIYWPTSFHEDKHLTRAIAGQLFTVSEKHKIQCYMEKAVAVAKTGKER--GQAPIGAVIVDPINEEVIAVC---------HDLRNVGRHPFFHAAMICIDLVAASQGGGTYKYNEPGFYNKNSQYNSANQECKESSTSDV--------NSISGNHKDPCACNTNGEDGISTQQVTTDNIALLSGDKSGPYLCTGYDLYITHEPCIM 324
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: A0A6P4Y6D1_BRABE (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=2 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y6D1_BRABE) HSP 1 Score: 99.4 bits (246), Expect = 5.400e-20 Identity = 94/308 (30.52%), Postives = 127/308 (41.23%), Query Frame = 1
Query: 55 VDVLVSSI-QPKQASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLLSSPEAYHAMIESKGQDLEERFCLS----PTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAG------------NENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDG-AEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
+DV V+ + KQ S +IKE+S PL DL HL+RV+S K T ++Q+LL + + E F P + V TR Q+E WP FH S E R +E+ + +M+ AL+ AQ +H G VGAVVVDP VV R +PLHHAVM+ V V G E TE+ + K A + + E GT R + + R D S + G YLCTG DLY+T+EPC+M
Sbjct: 53 IDVYVAPVLDKKQTSHLIKEVSSRFPLPDLL--HLKRVKSQKSGNKET-TIQILLCKAPSEDSSSPDSEDPTENGFRFDGLGKPFLTKVAVRPAITRRQYEHCAQYWPTAFHEDKSLERRLKGEFFSCEELQSIQKYMKRALQAAQHAKHT--GMEPVGAVVVDPVADEVVGVGHDLRHA----------GNPLHHAVMVAVDTVASSQGGGYWDHRGPGLYWREEQTESSNDDSKEVADC----------SSKRTEAGTDRKDTKLVDSTRTCDTSEEGQS-----NDGPYLCTGYDLYVTREPCIM 330
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Match: H0X8K9_OTOGA (Adenosine deaminase tRNA specific 3 n=2 Tax=Otolemur garnettii TaxID=30611 RepID=H0X8K9_OTOGA) HSP 1 Score: 97.8 bits (242), Expect = 1.220e-19 Identity = 99/305 (32.46%), Postives = 136/305 (44.59%), Query Frame = 1
Query: 22 DHEFDLAGSARVDVLVSSIQPKQASQIIKELSVLLPLGDLKLDHLRRVRSSKDPYTGTRSLQVLLSSPEAYHAMIESKG----QDLEERFCLSPTMHAVPQLEPRTREQFETGQSAWPMVFHHSTSEEARRAARIIPEQEVLNATTFMREALKDAQIGRHQAGGQAAVGAVVVDPGVGRVVATAAQERQRIRDESPRSMRNHPLHHAVMLCVQQVGRVICAGNENTEAEKEPFKTAASRLPRDGRLPGKAGRGQEKGTIRSNDGAEEVRCPDVFGGSNSVVKILSHGQYLCTGLDLYITQEPCLM 924
D E LA +A V + +Q S+++KE+S + PL HL+RVR S+D +G +L++LL +A M ++ R P + VP P TR QFE ++ WP FH + A ++ QE + M A+K AQ Q G AVGAVVVDP G V+AT D S SM + PL HAVM+CV V + G + PF + P A + GT+R D +E P Y+CTG DLY+T+EPC M
Sbjct: 37 DVELVLAYAAPV------LDKRQTSRLLKEVSAVYPLPSQP--HLKRVRPSQDA-SGPHALELLLCLADAAPGMRSLADLLPHPAVDPRGLGQPFLVPVPARPPLTRGQFEKARTHWPTSFHEDKQVTSALAGQLFSAQERAAMESHMERAVKAAQWAAAQ--GLRAVGAVVVDPASGCVLATG-------HDCS--SMAS-PLLHAVMVCVDLVAQ----GQGRGTYDFRPFPACSF-------TPAAASQAIRVGTVRKLD-EDEDDLP-----------------YVCTGYDLYVTREPCTM 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2091.6034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig2091.6034.1 >prot_H-elongata_contig2091.6034.1 ID=prot_H-elongata_contig2091.6034.1|Name=mRNA_H-elongata_contig2091.6034.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=309bp MLEVLEEDHEFDLAGSARVDVLVSSIQPKQASQIIKELSVLLPLGDLKLDback to top mRNA from alignment at H-elongata_contig2091:12434..14571+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig2091.6034.1 ID=mRNA_H-elongata_contig2091.6034.1|Name=mRNA_H-elongata_contig2091.6034.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2138bp|location=Sequence derived from alignment at H-elongata_contig2091:12434..14571+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig2091:12434..14571+ >mRNA_H-elongata_contig2091.6034.1 ID=mRNA_H-elongata_contig2091.6034.1|Name=mRNA_H-elongata_contig2091.6034.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1854bp|location=Sequence derived from alignment at H-elongata_contig2091:12434..14571+ (Himanthalia elongata Himel1 dioecious)back to top |