mRNA_H-elongata_contig20892.6027.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20892.6027.1
Unique NamemRNA_H-elongata_contig20892.6027.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Match: A0A6H5JRQ4_9PHAE (TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRQ4_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 5.330e-74
Identity = 159/393 (40.46%), Postives = 193/393 (49.11%), Query Frame = 3 
Query:   39 MKRLFGAVLPTLRGIARKARPSMASAKDVAPKSVHQEKVRKAMEALAPKGAMLPSENRALTMEIAAAMAGGDDV----LNKTPDEMFLAANALFQGTHLPQDKAKASELWKAASDAGHVKATYSYAGCLRNGD----------------------------------------GIERDIPMAMELFERLGKEGLLEAKHALGLMLSSGEGSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDKEEAKATQWLEVGIEAGDPMAASTLATWYQDGRGGLEVDHEKAYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFEVAAAXXXXXXXXXXXXXXXXXXXXXXDQQRALEMYKMGLRAEGQLDGAMAKVGEAMM 1085
            MKR+FGAV    R +  KA          AP + HQE VRKAME+LAP G  LPSE++ L ME+ AA + GD      L KTP++MFLAANA  QG H+  DK  A  LWK A++AGH KA                                                    GI +D   A+ LF+     G + A HA   M+ +G+G                                        G+KE+AKA QWLEV +EAGDPMA STLATWY  GR GLEVDH+KA+ELHL AA   MPRAQYNTAV   EG G++QNLPEAAAWFE A A                      D++RAL++Y+  LRAEGQL G +A  G+A M
Sbjct:    1 MKRVFGAVSGAFRSLVPKA---------TAPAAHHQESVRKAMESLAPPGRRLPSESKPLVMELVAAASEGDKEKELSLLKTPEDMFLAANAFHQGKHIRADKETAFALWKKAAEAGHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALGLFKAAATGGFVPAIHAAASMMEAGKG----------------------------------------GEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLEVDHKKAFELHLKAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLKGGLATAGDATM 344
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BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Match: A0A482SVR9_9ARCH (Sel1 repeat family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVR9_9ARCH)

HSP 1 Score: 110 bits (274), Expect = 1.320e-23
Identity = 70/217 (32.26%), Postives = 102/217 (47.00%), Query Frame = 3 
Query:  276 DEMFLAANALFQGT-HLPQDKAKASELWKAASDAGHVKATYSYAGCLRNGDGIERDIPMAMELFERL-GKEGLLEAKHALGLMLSSGEGSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDKEEAKATQWLEVGIEAGDPMAASTLATWYQDGRGGLEVDHEKAYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFEVA 920
            D++   A   ++G+  +  D AKA ELW   +  G V+A YS A CL++G GI  D   A++  + L  K     A ++L +M   GEG L                                     G ++ +  A  + E G+E GDP +   L TW+ +GRGGLEV+ +KA++L L AA    P A +N    L  G GV ++ P+AA WFE A
Sbjct:   89 DQLEELARVYYEGSKEITADPAKAVELWTLCASKGSVEARYSRAICLKDGVGIAEDKATAIQELQGLVDKHNYNFAHYSLAIMYDRGEGCL----VDLPKAFYHYRLAAKGGIQPAFHNLANAYAFGRGVEQSDHNARMFYEAGVEMGDPASLYVLGTWHYNGRGGLEVNKQKAFDLQLQAANAKHPAAMFNIGAALLVGDGVSEDAPKAAEWFEKA 301
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BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Match: A0A1Y1RC54_9PROT (Beta-lactamase n=1 Tax=Campylobacteraceae bacterium 4484_4 TaxID=1970775 RepID=A0A1Y1RC54_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 8.420e-16
Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 3 
Query:  654 GGDKEEAKATQWLEVGIEAGDPMAASTLATWYQDGRGGLEVDHEKAYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFE 914
            G +K+EA+A +  E  +E   P A   LA WY +G+GGLE +  KAYEL L AA  G+PRAQY  AV    G G  QN  EAA W+E
Sbjct:   49 GCEKDEARARELYEKAVEKKQPYALFNLAVWYANGKGGLERNPFKAYELFLEAAVAGIPRAQYEVAVMSERGNGTPQNYSEAAYWYE 135
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BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Match: A0A8K0JWT0_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JWT0_9TREE)

HSP 1 Score: 58.5 bits (140), Expect = 1.060e-5
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 3 
Query:  705 EAGDPMAASTLATWYQDGRGGLEVDHEKAYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFEVAAA 926
            E G P A   LA  +  G+ GL+VDHEKAY+L++ A+K   P A Y TAV    G G ++ +  A  ++  AAA
Sbjct:  374 EGGYPEAQFFLANMFGTGQLGLQVDHEKAYQLYMQASKANHPAATYRTAVCNELGAGTRKEMNRAVLFYRKAAA 447
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BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Match: A0A165ECV6_9BASI (HCP-like protein n=2 Tax=Calocera TaxID=29888 RepID=A0A165ECV6_9BASI)

HSP 1 Score: 55.8 bits (133), Expect = 6.700e-5
Identity = 32/86 (37.21%), Postives = 50/86 (58.14%), Query Frame = 3 
Query:  675 KATQWLEVGIEAGDPM--AASTLATWYQDGRGGLEVDHEKAYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFEVAAA 926
            +A + ++    +G+P+  A   LA  Y  G  GL++DHEKAY+ +++AAK   P A Y  AV    G G K++L  A A++  AA+
Sbjct:  194 EALKVIKKQATSGEPLPDAQFFLANCYGTGMLGLQIDHEKAYQFYVAAAKLRHPAASYRVAVCNELGAGTKKDLGRAVAFYRQAAS 279
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BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Match: UPI0016640D4B (sel1 repeat family protein n=2 Tax=Asaia siamensis TaxID=110479 RepID=UPI0016640D4B)

HSP 1 Score: 54.7 bits (130), Expect = 7.680e-5
Identity = 32/86 (37.21%), Postives = 43/86 (50.00%), Query Frame = 3 
Query:  666 EEAKATQWLEVGIEAGDPMAASTLATWYQDGRGGLEVDHEKAYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFEVAA 923
            + A+A QW E+   AG   A + L   +  G GG  VDH  A E +  AA+ G     YN A+ +  G G+K +LP A A F   A
Sbjct:   61 DPARARQWYEIAASAGYAPALNMLGRCHHFGWGGA-VDHAAAAEAYEKAARLGDLWGNYNLAIMVMRGIGMKPDLPRALALFRSGA 145
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20892.6027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JRQ4_9PHAE5.330e-7440.46TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A482SVR9_9ARCH1.320e-2332.26Sel1 repeat family protein n=1 Tax=archaeon TaxID=... [more]
A0A1Y1RC54_9PROT8.420e-1649.43Beta-lactamase n=1 Tax=Campylobacteraceae bacteriu... [more]
A0A8K0JWT0_9TREE1.060e-541.89Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A165ECV6_9BASI6.700e-537.21HCP-like protein n=2 Tax=Calocera TaxID=29888 RepI... [more]
UPI0016640D4B7.680e-537.21sel1 repeat family protein n=2 Tax=Asaia siamensis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20892contigH-elongata_contig20892:2393..6396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.8
Seed ortholog evalue1.3e-55
Seed eggNOG ortholog2880.D8LTH7
EggNOG free text desc.ERAD pathway
EggNOG OGsCOG0790@1,KOG1550@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionSel1-like
Ec32 orthologEc-02_005660.1
Exons9
Model size1085
Cds size1047
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20892.6027.1prot_H-elongata_contig20892.6027.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20892 2431..6396 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930167.8821192-UTR-H-elongata_contig20892:2392..24301622930167.8821192-UTR-H-elongata_contig20892:2392..2430Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20892 2393..2430 +
1691679306.346733-UTR-H-elongata_contig20892:2392..24301691679306.346733-UTR-H-elongata_contig20892:2392..2430Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20892 2393..2430 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930167.8997657-CDS-H-elongata_contig20892:2430..27031622930167.8997657-CDS-H-elongata_contig20892:2430..2703Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 2431..2703 +
1691679306.356036-CDS-H-elongata_contig20892:2430..27031691679306.356036-CDS-H-elongata_contig20892:2430..2703Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 2431..2703 +
1622930167.915057-CDS-H-elongata_contig20892:2984..30641622930167.915057-CDS-H-elongata_contig20892:2984..3064Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 2985..3064 +
1691679306.3636944-CDS-H-elongata_contig20892:2984..30641691679306.3636944-CDS-H-elongata_contig20892:2984..3064Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 2985..3064 +
1622930167.930871-CDS-H-elongata_contig20892:3492..36011622930167.930871-CDS-H-elongata_contig20892:3492..3601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 3493..3601 +
1691679306.3804154-CDS-H-elongata_contig20892:3492..36011691679306.3804154-CDS-H-elongata_contig20892:3492..3601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 3493..3601 +
1622930167.9440315-CDS-H-elongata_contig20892:3850..39501622930167.9440315-CDS-H-elongata_contig20892:3850..3950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 3851..3950 +
1691679306.4024568-CDS-H-elongata_contig20892:3850..39501691679306.4024568-CDS-H-elongata_contig20892:3850..3950Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 3851..3950 +
1622930167.9595957-CDS-H-elongata_contig20892:4284..43691622930167.9595957-CDS-H-elongata_contig20892:4284..4369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 4285..4369 +
1691679306.42029-CDS-H-elongata_contig20892:4284..43691691679306.42029-CDS-H-elongata_contig20892:4284..4369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 4285..4369 +
1622930167.9712071-CDS-H-elongata_contig20892:4730..48051622930167.9712071-CDS-H-elongata_contig20892:4730..4805Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 4731..4805 +
1691679306.4309795-CDS-H-elongata_contig20892:4730..48051691679306.4309795-CDS-H-elongata_contig20892:4730..4805Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 4731..4805 +
1622930167.9877415-CDS-H-elongata_contig20892:5370..54941622930167.9877415-CDS-H-elongata_contig20892:5370..5494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 5371..5494 +
1691679306.4395607-CDS-H-elongata_contig20892:5370..54941691679306.4395607-CDS-H-elongata_contig20892:5370..5494Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 5371..5494 +
1622930167.999531-CDS-H-elongata_contig20892:5984..60741622930167.999531-CDS-H-elongata_contig20892:5984..6074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 5985..6074 +
1691679306.447725-CDS-H-elongata_contig20892:5984..60741691679306.447725-CDS-H-elongata_contig20892:5984..6074Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 5985..6074 +
1622930168.0133817-CDS-H-elongata_contig20892:6285..63961622930168.0133817-CDS-H-elongata_contig20892:6285..6396Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 6286..6396 +
1691679306.4560754-CDS-H-elongata_contig20892:6285..63961691679306.4560754-CDS-H-elongata_contig20892:6285..6396Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20892 6286..6396 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20892.6027.1

>prot_H-elongata_contig20892.6027.1 ID=prot_H-elongata_contig20892.6027.1|Name=mRNA_H-elongata_contig20892.6027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=349bp
MKRLFGAVLPTLRGIARKARPSMASAKDVAPKSVHQEKVRKAMEALAPKG
AMLPSENRALTMEIAAAMAGGDDVLNKTPDEMFLAANALFQGTHLPQDKA
KASELWKAASDAGHVKATYSYAGCLRNGDGIERDIPMAMELFERLGKEGL
LEAKHALGLMLSSGEGSLDGVPQDEPRARELFKSAAIGGFVPAIHAAASM
MEGGKGGDKEEAKATQWLEVGIEAGDPMAASTLATWYQDGRGGLEVDHEK
AYELHLSAAKRGMPRAQYNTAVQLFEGKGVKQNLPEAAAWFEVAAAAGVP
QAMLNLGKMLEQGLGVERDQQRALEMYKMGLRAEGQLDGAMAKVGEAMM
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mRNA from alignment at H-elongata_contig20892:2393..6396+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20892.6027.1 ID=mRNA_H-elongata_contig20892.6027.1|Name=mRNA_H-elongata_contig20892.6027.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4004bp|location=Sequence derived from alignment at H-elongata_contig20892:2393..6396+ (Himanthalia elongata Himel1 dioecious)
TGGTAAGTCATCTACCATAGATCTCATCATAATACATAATGAAGCGCTTG
TTTGGTGCTGTGTTACCCACTCTCAGAGGGATCGCCCGCAAGGCGAGGCC
ATCAATGGCCTCAGCCAAAGACGTAGCACCGAAGTCCGTACACCAGGAGA
AAGTCAGGAAGGCGATGGAGGCTCTTGCGCCAAAGGGTGCCATGTTACCT
TCGGAGAACAGAGCCCTAACGATGGAGATAGCGGCAGCTATGGCTGGAGG
CGACGATGTTCTCAACAAAACTCCCGATGAAATGTTTCTCGCTGCGAACG
CATTGTTTCAGGTCTGGTCAGCTCGTCCAACCTGGAGTATTTTTGTAAAA
TCCTGACTGGGATAAGAAGCAGAGGAAATTATTGAACTTCGTAAGAGAGA
TTCGGCGGTACAGGACTGTCGGATTCGATGGTTGCGCCGCATTTTTGCTG
ACTTATCCCGTGTGACCTCTTCCGGCTGTTTTTTTTTACGGTTCTCGATG
CGGCGGCGGTGAACACGTCGCAATATTAATGATAGGTGGAAGGGATATCA
AGAGTTTCACGTTGTCTACCCTCGATGCTCCGTCTTATACAGGGCACGCA
CTTGCCGCAGGACAAGGCTAAGGCGTCCGAGCTTTGGAAGGCTGCTTCTG
ATGCCGGACACGTAAAGGCGACGTAAGGGACGCGCAGCCACAAGAGCTGG
AATATTGCAAGCCGTATTTGTCAAACCTTGTTGGCTAAAAATATATAGTG
GTTGGGGAACTGTCGGCGTCGCTTGCTTGAGAAAAAAACTTGCGTTTGGT
GGCATATTTTTGTGCAGCACGGGCGAATTAATCCTGGCGTAGGAAACGAG
CCGCCGCCACGATTGCTTGTAAGCGCGGCATGATTCTATGGTGGATTACA
TGCAGGTCGTACGCACCGCTGCGATCGTCCACAATTCGAAAGTCGTGAAA
AATTTCGCGCGAAAGGCCGAGTGTCTTGGATCAAACGCTCGCTTTCAGGC
CGAAATGACGAGCTGGAAATCTAAAAGTACAATGTTTCAGCATGTTTATC
TCCACTCCCCGCAGCCAAACCAAAGCGTTTGAAAATCCTTACGGCTCCAG
GTATTCCTACGCAGGCTGCTTGCGAAATGGGGACGGGATCGAACGGGACA
TTCCGATGGCGATGGAGTTGTTCGAACGACTGGGCAAGGAAGGTCTGCTA
GAAGCCAAGGTTTGCAAGGGGCTATACGCGAAAAACACCATGTATATAAG
ATCACCACAGCATGTATTCTTTAATATGTGTTTAAGTTAAAGCACCCGAC
GAGAAGCAGCACCTCTCCTGGCTCCGCCGTTCTAGTTTCTTGTAATCTGC
ACTGATGAAGGCATTTTCGCCTCTCAATAGGTCGCTCCATCTACCGCTGC
ATGCTAAATCGTATTTTCGCGTCATGCTCTATCCCCGACCATCGCCTTCC
TGTGATAGCACGCGCTAGGGCTCATGCTATCATCTGGAGAAGGGAGTCTC
GACGGTGTGCCGCAGGACGAACCCAGGGCTCGCGAACTGTTCAAGTCTGC
CGCTATTGGTAACCAATCTGCAGACGGAAGCAAAGAAGCACCGATGGTTT
TTGTTCGATGAATCGTTTCCTCAAACCCAATTTAGCAGCCCGTAAGCGGC
GGCTGGCGGTCTCAGATTTGGTATCGCGTGCCGCCCGCTGGAAACGCACA
AACCAACGAAATTCCTAAAACGATAGAGACAACTCTCGCCGTGACACCAC
GACAGGCTCCAGCAGTTCGTCAGATAGTTGAGCCACCGTCGGTCTAAAAG
CGCTATACTGAGGTAAAAGTCGAGCACCCGAATGCGCCCCAACGGACGTA
CGATTCTATCTTCTAACAATGAATTGTGTGCGAATGCCTCAGGCGGGTTC
GTTCCGGCAATTCACGCCGCTGCGTCCATGATGGAAGGTGGCAAGGGAGG
GGACAAGGAGGAAGCGAAGGCTACGCAGTAAGTCAAAGCACGATCTCGTG
CGACAAAGGAACCACCCACAATCGTGTGCTTTTGGACTGACCCAATCTCG
ACCACCCGTAGAGGCTGCGAGGTTTCCCCACCGTCGATTATCCCGCCACT
CTCGTTATTGTATGGGTTGATTATTTGAATTGCCCGAATCCACCTCGGTA
GTGTTATCAATGCTCTTTCAGGCGTTGGCGATCAATACGAGTTTCTCCCG
GCGCAACGCCCATTCCTACTTGTACGAAGCATGCCCCTGGCAACGACGGC
GGTCTCTCGTTCGATGAAGCATCCGCTATCGTCGTTCAAGTCGGCGTACT
GCTGTCACGTACGGTGCGTTGTCGACGCTCGGCCGCAGATGGCTTGAGGT
GGGGATAGAAGCGGGAGATCCGATGGCAGCCTCTACCCTGGCGACGTGGT
ACCAGGATGGCAGGTTTGCAAGAACTCTTTGATGATGCGTCCCGCCTACT
TCACCCCGCAGTAGCACCGTGAAGTCGCACAAGAGCTCTGGCGTAACTCG
GGCTTTGAGAGGAGCATGGCTTTCGTTCGTAATCGCAATGCATCGTTGAC
GTTACAGACGACTTTCCATGTATCCGGTAGCGATAATACTGGTACTTATA
TTGAACTCGTGCGTGAGGTAACCGGGGGAACAAGTGGACCATTATTTTTA
TTTAAACGTTTTGGTAAGCGCAATCCAACTCTATTCGACGAAGCTCTGGC
GAGCGTGTGGAAAGCAACGTCGTCGGAACGAAGAACAAATATTCGCGTGC
TACGCATTTTTGCGTCGGGGCGTGAATCGTGGATATCCGCCTGCCTCCAG
GCTCACAAATCCCGCACATAATCAGTGCACGCGTATGGGCTTTGGTCGGG
TGGCCCATCCCAGCGCTTTCCGTTTCGAATCGTAGGTTGCACCCTTAACT
TCCCCCTGCCTCCGTGTAACCCCTTCCGTTTTTTCTGCTGCGGGTCCCCG
CGCGGCAACCCTTGCGGCCGGCCGACAGGGGTGGGCTCGAGGTCGATCAC
GAAAAAGCATACGAGCTTCACTTGAGCGCGGCGAAGAGGGGCATGCCGCG
GGCGCAGTACAACACCGCCGTGCAGCTATTCGAGGGGAAGGGGGTCAAAC
AGGTGTGTGTGTGTGTGTGTGTGTTTGTGTATGTATTTTTAAAATTGAAC
ATAACCGCACAATCCGGCCCTGTCATGCTAGCCATTTTAGGCTAATGATA
TTTGTTGCGAAAATATATGATCAGACGCGACAACAGACACACACGTGTGT
ATGAGTGTGTTTGTACGTTAGGCATGTTGTCTGGTTGCTGCACGTTAGAC
ATGTTGCTAGATGTTAGATGTTACGCACATCAGTCAAGGGTGGAAAGTTC
GACGTAGACGAGCACGAACACGTTGCCTATTCTTTCATTTGAAAAACGAA
ATTAATCTTTGTCGCATCACACAAAAATGCTTTGTAATTGTATAATTTAG
TAAAATATTAAAAAAAAACTTGAGAGAAAATTTAAGGATTCGGTACTTTA
ATTTTAGGCGGTGTAGTTCAGCGGTTAGAACATTGGAATCATATCCCAAA
TGCCAGGGGTTCAAATCCCCTCTCCGCTATCGCTCCGTCCAGAACCTTCC
TGAGGCAGCCGCGTGGTTCGAGGTAGCAGCAGCCGCGGGGGTCCCGCAGG
CAATGCTCAACCTGGGGAAGATGTTGGAGCAGGTGAACCTTGATTGAAGA
GACCACTGATACCCTCCTCCGCGGTAGATTTACGTTCGGTACTGTTGTAT
GGCCCCTGCGTAGGTCGCGTGCGTGGCCCCAGACTGGGGGGAGAAGACCT
CGACGTGGACGTTATAGTGGCTATACTTACCGCGCAGACAGCAGTGAGCG
ATCATCGCATTCATTCGTTCCTGTAATAAACGTCTCCTCGCAGGGTCTCG
GGGTCGAGCGTGATCAACAGCGAGCCCTCGAGATGTACAAGATGGGCTTG
CGGGCAGAGGGGCAGCTGGACGGAGCGATGGCCAAAGTCGGCGAGGCGAT
GATG
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Coding sequence (CDS) from alignment at H-elongata_contig20892:2393..6396+

>mRNA_H-elongata_contig20892.6027.1 ID=mRNA_H-elongata_contig20892.6027.1|Name=mRNA_H-elongata_contig20892.6027.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2094bp|location=Sequence derived from alignment at H-elongata_contig20892:2393..6396+ (Himanthalia elongata Himel1 dioecious)
ATGAAGCGCTTGTTTGGTGCTGTGTTACCCACTCTCAGAGGGATCGCCCG
CAAGGCGAGGCCATCAATGGCCTCAGCCAAAGACGTAGCACCGAAGTCCG
TACACCAGGAGAAAGTCAGGAAGGCGATGGAGGCTCTTGCGCCAAAGGGT
GCCATGTTACCTTCGGAGAACAGAGCCCTAACGATGGAGATAGCGGCAGC
TATGGCTGGAGGCGACGATGTTCTCAACAAAACTCCCGATGAAATGTTTC
TCGCTGCGAACGCATTGTTTCAGATGAAGCGCTTGTTTGGTGCTGTGTTA
CCCACTCTCAGAGGGATCGCCCGCAAGGCGAGGCCATCAATGGCCTCAGC
CAAAGACGTAGCACCGAAGTCCGTACACCAGGAGAAAGTCAGGAAGGCGA
TGGAGGCTCTTGCGCCAAAGGGTGCCATGTTACCTTCGGAGAACAGAGCC
CTAACGATGGAGATAGCGGCAGCTATGGCTGGAGGCGACGATGTTCTCAA
CAAAACTCCCGATGAAATGTTTCTCGCTGCGAACGCATTGTTTCAGGGCA
CGCACTTGCCGCAGGACAAGGCTAAGGCGTCCGAGCTTTGGAAGGCTGCT
TCTGATGCCGGACACGTAAAGGCGACGGCACGCACTTGCCGCAGGACAAG
GCTAAGGCGTCCGAGCTTTGGAAGGCTGCTTCTGATGCCGGACACGTAAA
GGCGACGTATTCCTACGCAGGCTGCTTGCGAAATGGGGACGGGATCGAAC
GGGACATTCCGATGGCGATGGAGTTGTTCGAACGACTGGGCAAGGAAGGT
CTGCTAGAAGCCAAGGTATTCCTACGCAGGCTGCTTGCGAAATGGGGACG
GGATCGAACGGGACATTCCGATGGCGATGGAGTTGTTCGAACGACTGGGC
AAGGAAGGTCTGCTAGAAGCCAAGCACGCGCTAGGGCTCATGCTATCATC
TGGAGAAGGGAGTCTCGACGGTGTGCCGCAGGACGAACCCAGGGCTCGCG
AACTGTTCAAGTCTGCCGCTATTGCACGCGCTAGGGCTCATGCTATCATC
TGGAGAAGGGAGTCTCGACGGTGTGCCGCAGGACGAACCCAGGGCTCGCG
AACTGTTCAAGTCTGCCGCTATTGGCGGGTTCGTTCCGGCAATTCACGCC
GCTGCGTCCATGATGGAAGGTGGCAAGGGAGGGGACAAGGAGGAAGCGAA
GGCTACGCAGCGGGTTCGTTCCGGCAATTCACGCCGCTGCGTCCATGATG
GAAGGTGGCAAGGGAGGGGACAAGGAGGAAGCGAAGGCTACGCAATGGCT
TGAGGTGGGGATAGAAGCGGGAGATCCGATGGCAGCCTCTACCCTGGCGA
CGTGGTACCAGGATGGCAGATGGCTTGAGGTGGGGATAGAAGCGGGAGAT
CCGATGGCAGCCTCTACCCTGGCGACGTGGTACCAGGATGGCAGGGGTGG
GCTCGAGGTCGATCACGAAAAAGCATACGAGCTTCACTTGAGCGCGGCGA
AGAGGGGCATGCCGCGGGCGCAGTACAACACCGCCGTGCAGCTATTCGAG
GGGAAGGGGGTCAAACAGGGGTGGGCTCGAGGTCGATCACGAAAAAGCAT
ACGAGCTTCACTTGAGCGCGGCGAAGAGGGGCATGCCGCGGGCGCAGTAC
AACACCGCCGTGCAGCTATTCGAGGGGAAGGGGGTCAAACAGAACCTTCC
TGAGGCAGCCGCGTGGTTCGAGGTAGCAGCAGCCGCGGGGGTCCCGCAGG
CAATGCTCAACCTGGGGAAGATGTTGGAGCAGAACCTTCCTGAGGCAGCC
GCGTGGTTCGAGGTAGCAGCAGCCGCGGGGGTCCCGCAGGCAATGCTCAA
CCTGGGGAAGATGTTGGAGCAGGGTCTCGGGGTCGAGCGTGATCAACAGC
GAGCCCTCGAGATGTACAAGATGGGCTTGCGGGCAGAGGGGCAGCTGGAC
GGAGCGATGGCCAAAGTCGGCGAGGCGATGATGGGTCTCGGGGTCGAGCG
TGATCAACAGCGAGCCCTCGAGATGTACAAGATGGGCTTGCGGGCAGAGG
GGCAGCTGGACGGAGCGATGGCCAAAGTCGGCGAGGCGATGATG
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