mRNA_H-elongata_contig208822.6022.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig208822.6022.1
Unique NamemRNA_H-elongata_contig208822.6022.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.630e-53
Identity = 95/227 (41.85%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLN 708
            E    +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +    RRSVS   VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM P   +  I + EDN+GAI++A N  ++  ++H+D+ HH +R+ +ER  + +  V +  QHAD LTK+I  ++F  H  F++N
Sbjct:   93 EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMN 319          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.090e-52
Identity = 94/227 (41.41%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLN 708
            E    +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +    RRSVS   VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM P   +  I + EDN+GAI++  N  ++  ++H+D+ HH +R+ +ER  + + +V +  QHAD LTK+I  ++F  H  F++N
Sbjct:  148 EASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMN 374          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.280e-51
Identity = 94/227 (41.41%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLN 708
            E    +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +    RRSVS   VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM P   +  I + EDN+GAI++A N  ++  ++H+D+ HH +R+ +ER  + + +V +  QHAD LTK+I  ++   H  F++N
Sbjct:  210 EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMN 436          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5KQN5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN5_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.930e-50
Identity = 97/227 (42.73%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLN 708
            E    +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +    RRSVS   VM  GG ++WFSR QK     ++ESEYVA+A+++ E+ FLRQV  FM P   +  I + EDN+GAI++A N  ++  ++H+D+ HH +R+ +ER  + + +V S  QHAD LTK+I  ++F  H  F++N
Sbjct:  600 EACADVPFRELVGSLMWLATQTRPDIAKAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLYTTESEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAYNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMN 826          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5L3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H4_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 2.030e-50
Identity = 94/224 (41.96%), Postives = 140/224 (62.50%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARF 699
            E    +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +     RSVS   VM  GG ++WFSR QK    +++E+EYVA A+++ E+ FLRQV  FM P   +  I + EDN+GAI++A N  ++  ++H+D+ HH +R+ +ER  + + +V S  QHAD LTK+I  ++F  H  F
Sbjct:  185 EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKGADCRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAFADVLKEVLFLRQVWRFMLPDTGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDF 408          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.450e-50
Identity = 96/227 (42.29%), Postives = 145/227 (63.88%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLN 708
            E    +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +    RRSVS   VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM P   +  I + EDN+GAI++A N  ++  ++H+D+ HH +R+ +ER  + + +V S  QHAD LTK+I  ++F  H  F++N
Sbjct: 1244 EACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMN 1470          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 6.190e-50
Identity = 93/227 (40.97%), Postives = 141/227 (62.11%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLN 708
            E    +P+RE+VG+LMW AT TRPDI+ AA  +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY +    RRSVS   VM   G ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  F+ P   +  I + EDN+GAI+ A N   +   +H+D+ HH +R+ +ER  + + +V +  QHAD LTK+   ++F  H  F++N
Sbjct:  100 EASADVPFRELVGSLMWLATQTRPDIADAARAVARYCPSPKMVHWKAALGILGYVRRTSWMGITFEGGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLRQVWRFILPDASMPCIPVFEDNQGAIQNAHNPIINSNLKHIDVMHHFIRELVERKDITITHVPTQVQHADFLTKASSKQSFALHRDFMMN 326          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.170e-49
Identity = 92/218 (42.20%), Postives = 138/218 (63.30%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDV-AIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTF 681
            E    +P+RE+VG++MW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+      G  +  +VDADY      RRSVS   VM  GG ++WFSR QK    +++E+EYVA+A+++ E+ FLRQV  FM P   +  I + EDN+GAI++A N  ++  ++H+D  HH++R  +ER  + + +V S  QHAD LTK+I  ++F
Sbjct:   65 EACADVPFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAISKESF 282          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 4.070e-49
Identity = 96/229 (41.92%), Postives = 134/229 (58.52%), Query Frame = 1
Query:   40 EEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDVA-IKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLNHS 714
            EE   +P+RE+VG LMW A  TRPDIS A   +A+ +  P  +HW+AAQK L YL  T  L + +  +         +V AD+ +    RRSVS   V +AG  + W SR QK  A ++SE+EY+A+ + V E  F   + +F+ P      IK+ EDNEGAI +A N  SS R +H+D+ HH +R   E G + + +V S EQHADILTK++  + FE H  F+L  S
Sbjct:    4 EEAGDVPFREVVGCLMWIACQTRPDISNAVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLS 232          
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.630e-48
Identity = 91/221 (41.18%), Postives = 134/221 (60.63%), Query Frame = 1
Query:   55 IPYREIVGALMWAATMTRPDISFAAHQMAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCPDTRRSVS---VMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQVKEFMTPPIDVA-IKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIERGLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLL 705
            +P+RE+VG+LMW A+ TR DIS A   +A+ +  P  +HW+AAQK L YL  T  L + +  +         +VDAD+ +    RRSVS   V +A   + W SR QK  + ++SE+EY+A+ + V E  F+  + +F+ P +    I + EDNEGAI +A N  SS R++H+D+ HH +R+  E G++ V +V S EQHADILTK++    FE H  F L
Sbjct:   34 VPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDFAL 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig208822.6022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP70_9PHAE2.630e-5341.85Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.090e-5241.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.280e-5141.41Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQN5_9PHAE1.930e-5042.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L3H4_9PHAE2.030e-5041.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE2.450e-5042.29Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K2P8_9PHAE6.190e-5040.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K2_9PHAE1.170e-4942.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW47_9PHAE4.070e-4941.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCG6_9PHAE1.630e-4841.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig208822contigH-elongata_contig208822:326..1039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.3
Seed ortholog evalue3.5e-41
Seed eggNOG ortholog67593.Physo139221
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size714
Cds size714
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930167.3669791-CDS-H-elongata_contig208822:325..10391622930167.3669791-CDS-H-elongata_contig208822:325..1039Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig208822 326..1039 -
1691679306.185759-CDS-H-elongata_contig208822:325..10391691679306.185759-CDS-H-elongata_contig208822:325..1039Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig208822 326..1039 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig208822.6022.1prot_H-elongata_contig208822.6022.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig208822 326..1039 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig208822.6022.1

>prot_H-elongata_contig208822.6022.1 ID=prot_H-elongata_contig208822.6022.1|Name=mRNA_H-elongata_contig208822.6022.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
LSKSDSPQTGSKVEEMRQIPYREIVGALMWAATMTRPDISFAAHQMAKFN
DNPGPTHWRAAQKALQYLWRTRDLGITYGEEPGGGTKLSAWVDADYGTCP
DTRRSVSVMMAGGAISWFSRVQKVSAAASSESEYVALAEMVNELRFLRQV
KEFMTPPIDVAIKIHEDNEGAIKMARNRFSSRRTRHVDINHHMVRDAIER
GLVHVEYVRSGEQHADILTKSIDVKTFEKHARFLLNHS
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mRNA from alignment at H-elongata_contig208822:326..1039-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig208822.6022.1 ID=mRNA_H-elongata_contig208822.6022.1|Name=mRNA_H-elongata_contig208822.6022.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=714bp|location=Sequence derived from alignment at H-elongata_contig208822:326..1039- (Himanthalia elongata Himel1 dioecious)
CTTTCGAAATCAGACAGCCCGCAAACGGGCTCAAAGGTCGAAGAAATGCG CCAGATTCCCTACCGAGAAATCGTTGGGGCCCTAATGTGGGCAGCGACGA TGACCAGGCCCGACATTTCATTCGCTGCGCACCAAATGGCGAAATTCAAC GACAACCCGGGACCGACACACTGGAGGGCAGCCCAGAAAGCACTGCAATA TTTATGGCGCACTCGGGACCTCGGGATCACCTACGGAGAAGAACCGGGGG GGGGGACCAAGTTATCAGCGTGGGTCGACGCAGACTACGGCACCTGCCCG GACACGCGTCGCTCAGTGTCGGTGATGATGGCTGGCGGGGCCATTAGTTG GTTCTCACGAGTGCAAAAGGTATCGGCGGCGGCGTCGTCCGAATCGGAGT ACGTCGCGCTGGCTGAGATGGTAAACGAGTTGCGTTTCCTACGACAGGTC AAGGAGTTCATGACCCCTCCGATCGACGTCGCCATCAAGATACACGAGGA TAACGAAGGCGCAATCAAGATGGCGAGAAACCGCTTCAGCAGTCGACGAA CGAGGCACGTGGACATTAACCATCACATGGTCCGCGACGCGATCGAGAGG GGGTTGGTTCACGTAGAATACGTTCGGTCCGGGGAACAGCACGCCGACAT CCTCACGAAGTCGATAGACGTCAAGACATTCGAGAAGCACGCGAGATTCC TTCTGAATCATTCC
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Coding sequence (CDS) from alignment at H-elongata_contig208822:326..1039-

>mRNA_H-elongata_contig208822.6022.1 ID=mRNA_H-elongata_contig208822.6022.1|Name=mRNA_H-elongata_contig208822.6022.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at H-elongata_contig208822:326..1039- (Himanthalia elongata Himel1 dioecious)
CTTTCGAAATCAGACAGCCCGCAAACGGGCTCAAAGGTCGAAGAAATGCG
CCAGATTCCCTACCGAGAAATCGTTGGGGCCCTAATGTGGGCAGCGACGA
TGACCAGGCCCGACATTTCATTCGCTGCGCACCAAATGGCGAAATTCAAC
GACAACCCGGGACCGACACACTGGAGGGCAGCCCAGAAAGCACTGCAATA
TTTATGGCGCACTCGGGACCTCGGGATCACCTACGGAGAAGAACCGGGGG
GGGGGACCAAGTTATCAGCGTGGGTCGACGCAGACTACGGCACCTGCCCG
GACACGCGTCGCTCAGTGTCGGTGATGATGGCTGGCGGGGCCATTAGTTG
GTTCTCACGAGTGCAAAAGGTATCGGCGGCGGCGTCGTCCGAATCGGAGT
ACGTCGCGCTGGCTGAGATGGTAAACGAGTTGCGTTTCCTACGACAGGTC
AAGGAGTTCATGACCCCTCCGATCGACGTCGCCATCAAGATACACGAGGA
TAACGAAGGCGCAATCAAGATGGCGAGAAACCGCTTCAGCAGTCGACGAA
CGAGGCACGTGGACATTAACCATCACATGGTCCGCGACGCGATCGAGAGG
GGGTTGGTTCACGTAGAATACGTTCGGTCCGGGGAACAGCACGCCGACAT
CCTCACGAAGTCGATAGACGTCAAGACATTCGAGAAGCACGCGAGATTCC
TTCTGAATCATTCCCTTTCGAAATCAGACAGCCCGCAAACGGGCTCAAAG
GTCGAAGAAATGCGCCAGATTCCCTACCGAGAAATCGTTGGGGCCCTAAT
GTGGGCAGCGACGATGACCAGGCCCGACATTTCATTCGCTGCGCACCAAA
TGGCGAAATTCAACGACAACCCGGGACCGACACACTGGAGGGCAGCCCAG
AAAGCACTGCAATATTTATGGCGCACTCGGGACCTCGGGATCACCTACGG
AGAAGAACCGGGGGGGGGGACCAAGTTATCAGCGTGGGTCGACGCAGACT
ACGGCACCTGCCCGGACACGCGTCGCTCAGTGTCGGTGATGATGGCTGGC
GGGGCCATTAGTTGGTTCTCACGAGTGCAAAAGGTATCGGCGGCGGCGTC
GTCCGAATCGGAGTACGTCGCGCTGGCTGAGATGGTAAACGAGTTGCGTT
TCCTACGACAGGTCAAGGAGTTCATGACCCCTCCGATCGACGTCGCCATC
AAGATACACGAGGATAACGAAGGCGCAATCAAGATGGCGAGAAACCGCTT
CAGCAGTCGACGAACGAGGCACGTGGACATTAACCATCACATGGTCCGCG
ACGCGATCGAGAGGGGGTTGGTTCACGTAGAATACGTTCGGTCCGGGGAA
CAGCACGCCGACATCCTCACGAAGTCGATAGACGTCAAGACATTCGAGAA
GCACGCGAGATTCCTTCTGAATCATTCC
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