mRNA_H-elongata_contig2086.6014.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI) HSP 1 Score: 223 bits (567), Expect = 1.510e-64 Identity = 107/128 (83.59%), Postives = 117/128 (91.41%), Query Frame = 1
Query: 25 QISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWS 408
Q+SLEPLKPFR IVEVI+KRK GGG WRYEVKVEAT+A PDD ISLRA+VGG SSA+FRLCNRYL YAPFQA+FT DSALSLSVEP+DG L PFGTDGTPVTVTYAPT+YA +QKGRLIVETEDIRW+
Sbjct: 3185 QVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWA 3312
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A835Z976_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z976_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.010e-40 Identity = 80/170 (47.06%), Postives = 106/170 (62.35%), Query Frame = 1
Query: 25 QISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAY------------------------------FTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRA 444
Q+S EPL+PF E+++ R R GG WR+ + + AT+A PDD+ ++A VGG +S RLCN YL APFQAY FT DS+LSLSVEPSDG LAPFGT+GT +TVTYAP +Y+ Q+GRL+V T+D++WSY V+G FP ++
Sbjct: 2651 QLSFEPLRPFTAAAELVVIR-RSGGRWRFGISLIATDAAPDDSFEIQAPVGGAASVSLRLCNCYLGCAPFQAYVFYVAXXXXXXXXXXXXXXXXXXXXXXXXXFTPDSSLSLSVEPSDGVLAPFGTEGTQLTVTYAPKQYSPGQRGRLVVCTDDVQWSYEVSGVFPNVKS 2819
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A7S2FHQ5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHQ5_9STRA) HSP 1 Score: 144 bits (362), Expect = 5.140e-39 Identity = 67/141 (47.52%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 25 QISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
Q++ EPL+PF V+++I R GG W +E++++A + DPDD I + A + SS FRL NR+ YAPFQA+F+TDSA++L V PS G L P T GT TV+++PT Y Q+GRL+++TED++W+Y VTG+ P P
Sbjct: 158 QVAFEPLRPFSTSVKLVIVRGTGGR-WPFELQLDAMDPDPDDQIVIEANLRTTSSVAFRLTNRFPVYAPFQAFFSTDSAMTLQVHPSTGLLGPVDTQGTVFTVSFSPTEYGKLQRGRLVIQTEDMQWTYEVTGTHPHVLVP 297
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A813BR30_9DINO (CFAP47 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BR30_9DINO) HSP 1 Score: 139 bits (349), Expect = 2.480e-36 Identity = 63/141 (44.68%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 25 QISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
++ +EPLKPF V E+++K K GG WR+ V + AT+A+PDD I++ +++ +S F+L N++L YA F+AYFT +SA V PS+GTL P+G+ G TV++ P Y G+LI+ET D++WSY + G+ P +RAP
Sbjct: 249 RLDMEPLKPFEVPAEIVVK-KSSGGRWRFPVLLVATDAEPDDVITIESSLNRTASVSFQLSNQFLDYADFKAYFTLESAPEFQVHPSEGTLPPYGSPGAEFTVSFTPREYGKLLSGKLIIETADMQWSYVIKGTHPEYRAP 388
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A7S1CEQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEQ9_9STRA) HSP 1 Score: 132 bits (331), Expect = 5.400e-33 Identity = 62/140 (44.29%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 28 ISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
I+ EPL+PF E ++ K GG WRY++++ ATE +PDD I++ A + SS F L N++ YAPF+A F+ +S L+V P +G L P GT+GT V++ P Y + G+LI+ETED+RWSY V G+ P + AP
Sbjct: 419 ITFEPLRPFSCNCEFVVN-KASGGRWRYDLRLNATEPEPDDVITVEALLHHTSSVAFNLTNQFATYAPFKASFSLESPSELTVHPEEGVLPPVGTEGTTFVVSFTPREYGKTLVGKLIIETEDMRWSYEVRGTHPHYAAP 557
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A7S2STJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STJ8_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.040e-32 Identity = 54/118 (45.76%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 94 GGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
GG W +E++++ATE +PDD+I++ A + ++ F+L NR+ A+ PFQA+F+TDSAL+LSV P G LAP G++GT +V+++P Y Q+GRL ++TE+ W+Y VTG+ P P
Sbjct: 1 GGRWPFELQLQATEPEPDDHITIEAHLKTTATVNFKLVNRFSAFTPFQAFFSTDSALTLSVSPPSGLLAPAGSEGTEFSVSFSPQEYGKLQRGRLTIQTEETVWTYEVTGTNPRTEVP 118
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A812MPV1_9DINO (CFAP47 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MPV1_9DINO) HSP 1 Score: 127 bits (320), Expect = 2.660e-31 Identity = 60/147 (40.82%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 7 DFYMVVQISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
D ++++++ PL+PF + ++I R GG WR+++K+EATE + DD IS+++ + +S FRL N Y+ F+A+F +SA +V+P+ G L P GT GT VTY PT Y +G+LI++TED+ WSY V G+ P + AP
Sbjct: 2259 DGQVMLKVAFSPLRPFVALCNLVITRA-SGGRWRFDLKLEATEPEVDDIISIQSPLNKPASVAFRLNNHTSVYSEFEAFFDAESAYEFTVQPTAGVLEPAGTSGTTFVVTYKPTEYGKPVQGKLIIQTEDVFWSYLVKGTHPKYSAP 2404
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A812UD30_9DINO (CFAP47 protein n=7 Tax=Symbiodinium TaxID=2949 RepID=A0A812UD30_9DINO) HSP 1 Score: 127 bits (320), Expect = 2.670e-31 Identity = 60/147 (40.82%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 7 DFYMVVQISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
D ++++++ PL+PF + ++I R GG WR+++K+EATE + DD IS+++ + +S FRL N Y+ F+A+F +SA +V+P+ G L P GT GT VTY PT Y +G+LI++TED+ WSY V G+ P + AP
Sbjct: 2714 DGQVMLKVNFSPLRPFVALCNLVITRA-SGGRWRFDLKLEATEPEVDDIISIQSPLNKPASVAFRLNNHTSVYSEFEAFFDAESAYEFTVQPTAGVLEPAGTSGTTFVVTYKPTEYGKPVQGKLIIQTEDVFWSYLVKGTHPKYSAP 2859
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: F0XXK4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK4_AURAN) HSP 1 Score: 127 bits (320), Expect = 2.680e-31 Identity = 62/138 (44.93%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 37 EPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCN-RYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
EPL+PF V +++KR GG W +EV+++ E DPDD I + A + + F+L N + Y PF A+F+TDSA +L+V P+ G LAP GT+GT V++ P +Y Q+GRLI++TED+ WSY V G+ P F P
Sbjct: 3048 EPLRPFSTSVHLVVKRATGGR-WPFEVQLDVDEPDPDDAIEIEANLHTTAKVQFKLVNSNAMDYTPFNAFFSTDSAHTLTVSPAHGLLAPVGTEGTNFDVSFRPVKYGMLQRGRLIIQTEDMMWSYEVHGTHPSFTVP 3184
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Match: A0A813KGG2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KGG2_POLGL) HSP 1 Score: 127 bits (319), Expect = 3.580e-31 Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 25 QISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRATVGGQSSAIFRLCNRYLAYAPFQAYFTTDSALSLSVEPSDGTLAPFGTDGTPVTVTYAPTRYASSQKGRLIVETEDIRWSYAVTGSFPGFRAP 447
++ PL+PF + ++I R GG WR+++K+EATE + DD IS+++ + +S FRL N Y+ F A+F +SA +V+P+ G L P GT GT +TY PT Y +G+LI++TED+ WSY V G+ P + AP
Sbjct: 1650 KVKFAPLRPFVALCNLVITRA-SGGRWRFDLKLEATEPEVDDTISIQSPLNKPASVAFRLSNHTSVYSEFDAFFDAESAYEFTVQPTSGVLEPAGTSGTTFVITYKPTEYGKPVQGKLIIQTEDVYWSYMVKGTHPKYTAP 1789 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2086.6014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig2086.6014.1 >prot_H-elongata_contig2086.6014.1 ID=prot_H-elongata_contig2086.6014.1|Name=mRNA_H-elongata_contig2086.6014.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp MVVQISLEPLKPFRVIVEVIIKRKRGGGLWRYEVKVEATEADPDDNISLRback to top mRNA from alignment at H-elongata_contig2086:1745..2743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig2086.6014.1 ID=mRNA_H-elongata_contig2086.6014.1|Name=mRNA_H-elongata_contig2086.6014.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=999bp|location=Sequence derived from alignment at H-elongata_contig2086:1745..2743+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig2086:1745..2743+ >mRNA_H-elongata_contig2086.6014.1 ID=mRNA_H-elongata_contig2086.6014.1|Name=mRNA_H-elongata_contig2086.6014.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at H-elongata_contig2086:1745..2743+ (Himanthalia elongata Himel1 dioecious)back to top |