mRNA_H-elongata_contig208536.6011.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: D7FUE9_ECTSI (Alkylglycerone-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE9_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 1.220e-21 Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 1
Query: 22 KAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDFR 183
KA GAFSRT VGLDLASAMLGSEGCLGIITSVVVKV PLP+VSEHAS+LFRDF+
Sbjct: 2176 KAPGAFSRTSVGLDLASAMLGSEGCLGIITSVVVKVVPLPQVSEHASFLFRDFK 2229
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A6H5KHQ5_9PHAE (FAD-binding PCMH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ5_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.090e-21 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 19 RKAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDFR 183
R A GAFSRT VGLDLASAMLGSEGCLGIITSVVVKV PLP+VSEHAS+LFRDF+
Sbjct: 1764 RWAPGAFSRTSVGLDLASAMLGSEGCLGIITSVVVKVVPLPQVSEHASFLFRDFK 1818
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A534QD86_9DELT (Alkylglycerone-phosphate synthase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534QD86_9DELT) HSP 1 Score: 63.5 bits (153), Expect = 2.870e-10 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 31 GAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDF 180
GA R VG D A +LGSEG LGI+TS VVKVHPLPE+S+H S +FR+F
Sbjct: 279 GAPPRESVGGDPARWLLGSEGRLGIVTSAVVKVHPLPELSKHGSVIFREF 328
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A164HPK7_9CRUS (Alkylglycerone-phosphate synthase n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164HPK7_9CRUS) HSP 1 Score: 57.0 bits (136), Expect = 4.360e-9 Identity = 23/60 (38.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 IFPEFSRKAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDF 180
+ P ++ G + R G D+ M+GSEG LG+IT V +K+ P+P + ++AS++F DF
Sbjct: 19 VTPSGEWRSSGTYPRVSTGPDMNHVMIGSEGTLGVITEVTIKIRPIPPLRKYASFVFPDF 78
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A2V8K107_9BACT (Alkylglycerone-phosphate synthase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8K107_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 8.940e-9 Identity = 30/49 (61.22%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 34 AFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDF 180
A R VGLDL M GSEG LG+ITS VVK+ PLPEV E+ S LF F
Sbjct: 284 ASPRESVGLDLRRLMFGSEGTLGVITSAVVKIFPLPEVQEYGSVLFPTF 332
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A7S4VSF5_9DINO (Alkylglycerone-phosphate synthase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VSF5_9DINO) HSP 1 Score: 58.9 bits (141), Expect = 1.240e-8 Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 16 SRKAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDF 180
S+ + A R+ L+L LGSEGCLG++TS VV+V PLPEV+E+ S F D+
Sbjct: 1569 SKTSSTALGRSSTNLELTGLALGSEGCLGVVTSAVVRVRPLPEVTEYQSVAFPDW 1623
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A7Y3PKK4_9ACTN (FAD-binding oxidoreductase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y3PKK4_9ACTN) HSP 1 Score: 58.5 bits (140), Expect = 1.660e-8 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 28 GGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDFR 183
GG R+ VG DL + +GSEG LG+ITSVV+KVHPLP + A+Y F F+
Sbjct: 216 GGLAPRSAVGPDLTAIFVGSEGTLGVITSVVLKVHPLPNYEKRAAYGFPTFQ 267
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: E0QT79_9ACTO (FAD linked oxidase, C-terminal domain protein n=13 Tax=Mobiluncus mulieris TaxID=2052 RepID=E0QT79_9ACTO) HSP 1 Score: 58.5 bits (140), Expect = 1.670e-8 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 1
Query: 1 IFPEFSRKAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDFR 183
+ P+ + GG + G DL LGSEG LG+IT V V++HP+PEV + ++ FRDF+
Sbjct: 231 VTPQGIMEIGGPAPASATGPDLRQLFLGSEGTLGVITRVRVRIHPIPEVKRYEAFSFRDFK 291
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A812KV89_9DINO (Ads-1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KV89_9DINO) HSP 1 Score: 58.5 bits (140), Expect = 1.700e-8 Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 7 PEFSRKAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLFRDF 180
P ++ A R + L S +LGSEGCLGIITS VV+V PLPEV E+ S +F D+
Sbjct: 1760 PRVPAQSQTAIGRASTNIGLPSLVLGSEGCLGIITSAVVRVRPLPEVVEYQSIVFPDW 1817
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Match: A0A7S1WVF7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WVF7_ALECA) HSP 1 Score: 55.8 bits (133), Expect = 1.880e-8 Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 31 GAFSRTLVG-----LDLASAMLGSEGCLGIITSVVVKVHPLPEVSEHASYLF 171
G+ SRT +G L+L +LGSEGCLG++TS VV+V PLPE +E+ S +F
Sbjct: 2 GSSSRTALGRSSTNLELTGLVLGSEGCLGVVTSAVVRVRPLPEATEYESVVF 53 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig208536.6011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig208536.6011.1 >prot_H-elongata_contig208536.6011.1 ID=prot_H-elongata_contig208536.6011.1|Name=mRNA_H-elongata_contig208536.6011.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp IFPEFSRKAGGAFSRTLVGLDLASAMLGSEGCLGIITSVVVKVHPLPEVSback to top mRNA from alignment at H-elongata_contig208536:251..433+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig208536.6011.1 ID=mRNA_H-elongata_contig208536.6011.1|Name=mRNA_H-elongata_contig208536.6011.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=183bp|location=Sequence derived from alignment at H-elongata_contig208536:251..433+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig208536:251..433+ >mRNA_H-elongata_contig208536.6011.1 ID=mRNA_H-elongata_contig208536.6011.1|Name=mRNA_H-elongata_contig208536.6011.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=366bp|location=Sequence derived from alignment at H-elongata_contig208536:251..433+ (Himanthalia elongata Himel1 dioecious)back to top |