mRNA_H-elongata_contig20802.5990.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A6H5K078_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K078_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.120e-48 Identity = 79/84 (94.05%), Postives = 82/84 (97.62%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
PVQLTFGGRS G+THGLADFVAQEEMDRYRGFWWSLDSS IAFTEVDERHIPSFRIMHQGKD+VGEGAQEDHHYPFAGK+NPKV
Sbjct: 284 PVQLTFGGRSRGVTHGLADFVAQEEMDRYRGFWWSLDSSSIAFTEVDERHIPSFRIMHQGKDTVGEGAQEDHHYPFAGKDNPKV 367
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A7S0FCE8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FCE8_9DINO) HSP 1 Score: 128 bits (321), Expect = 1.410e-34 Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
P L G R G+THGLADF+AQEE+DRY GFW S D +AF EVDE HIP FRIMH G DSVG+GAQEDH YPFAG+ NPKV
Sbjct: 56 PRALMAGARGTGITHGLADFLAQEELDRYEGFWISPDGGQVAFEEVDETHIPEFRIMHSGSDSVGDGAQEDHRYPFAGEPNPKV 139
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A3B8VIW7_9CHLR (S9 family peptidase (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3B8VIW7_9CHLR) HSP 1 Score: 126 bits (316), Expect = 4.260e-34 Identity = 57/81 (70.37%), Postives = 64/81 (79.01%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKEN 243
P Q+T G R G THGLA+++AQEEM R GFWWS D S IAFTEVDE HIP +RI+HQGKD VGEGAQEDH YPFAG+ N
Sbjct: 164 PRQITSGARGTGKTHGLAEYIAQEEMGRGSGFWWSRDGSHIAFTEVDETHIPVYRIVHQGKDQVGEGAQEDHRYPFAGEAN 244
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A7S4PWF3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PWF3_9DINO) HSP 1 Score: 132 bits (333), Expect = 4.570e-34 Identity = 60/84 (71.43%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
P LT G R G+THGLADF+AQEE+DRY GFW S DSS +AF EVDE+HIP FRIMH G ++VGEGAQEDH YPFAG+ NPKV
Sbjct: 321 PRALTAGARGTGVTHGLADFLAQEELDRYEGFWISPDSSQVAFEEVDEQHIPEFRIMHSGSEAVGEGAQEDHRYPFAGRANPKV 404
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A7S1DWI9_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DWI9_HEMAN) HSP 1 Score: 120 bits (302), Expect = 1.320e-33 Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAG 234
P+QLT G R + +T+GLAD+VAQEEM RY G+W S DS+L+AF +VDE +P +RIMHQG D VGEGAQEDHHYPFAG
Sbjct: 38 PLQLTTGSRDSAVTNGLADYVAQEEMGRYEGYWISPDSTLVAFEQVDESGVPEYRIMHQGSDKVGEGAQEDHHYPFAG 115
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A356KCX9_9BACT (S9 family peptidase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KCX9_9BACT) HSP 1 Score: 124 bits (311), Expect = 1.830e-33 Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAG 234
P Q+T G R G THGLAD+VA+EEM RY G+WWS D +AFTEVD+ HIP +RI+HQGKD+VGEGAQEDH YPFAG
Sbjct: 163 PRQVTEGARGTGRTHGLADYVAEEEMSRYAGYWWSHDGEWLAFTEVDDTHIPVYRIVHQGKDAVGEGAQEDHRYPFAG 240
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A438HWX4_VITVI (Dipeptidyl aminopeptidase 4 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HWX4_VITVI) HSP 1 Score: 127 bits (319), Expect = 1.920e-33 Identity = 59/84 (70.24%), Postives = 64/84 (76.19%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
P QLTFG N LTHGLA+++AQEEMDR G+WWSLDS IAFT+VD IP FRIMHQGK SVG AQEDH YPFAG N KV
Sbjct: 200 PRQLTFGANGNTLTHGLAEYIAQEEMDRKNGYWWSLDSRFIAFTQVDSSEIPLFRIMHQGKSSVGADAQEDHAYPFAGASNVKV 283
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A2R5GLV6_9STRA (Dipeptidyl peptidase 9 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLV6_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.020e-33 Identity = 59/84 (70.24%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 1 PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
P +LT+ R NG T GLADF+AQEEMDRY GFWWS DS IAF VDE HIP +RIMHQGK+ VG+ AQEDH YPFAGK NP V
Sbjct: 1067 PQRLTYDSRGNGKTSGLADFIAQEEMDRYHGFWWSHDSQHIAFELVDESHIPEYRIMHQGKEEVGDSAQEDHRYPFAGKANPHV 1150
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: A0A022QD77_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QD77_ERYGU) HSP 1 Score: 130 bits (326), Expect = 3.770e-33 Identity = 60/82 (73.17%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 7 QLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
QLT G N +THGLA+F+AQEEMDR G+WWSLDS LIAFTEVD IP FRIMHQGKDSVG AQEDH YPFAG N KV
Sbjct: 180 QLTLGANENAITHGLAEFIAQEEMDRKSGYWWSLDSKLIAFTEVDSSEIPLFRIMHQGKDSVGSDAQEDHAYPFAGASNVKV 261
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Match: X0W5B8_9ZZZZ (DPPIV_N domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0W5B8_9ZZZZ) HSP 1 Score: 124 bits (310), Expect = 4.510e-33 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 7 QLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHIPSFRIMHQGKDSVGEGAQEDHHYPFAGKENPKV 252
QLT G R G THGLA+++AQEEM R+ GFWWS D +AF EVDE HI +RI+HQGKD VGEGAQEDH YPFAG EN +V
Sbjct: 1 QLTSGARGTGKTHGLAEYIAQEEMGRHHGFWWSKDGKWLAFAEVDETHISRYRIVHQGKDEVGEGAQEDHGYPFAGTENARV 82 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20802.5990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20802.5990.1 >prot_H-elongata_contig20802.5990.1 ID=prot_H-elongata_contig20802.5990.1|Name=mRNA_H-elongata_contig20802.5990.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp PVQLTFGGRSNGLTHGLADFVAQEEMDRYRGFWWSLDSSLIAFTEVDERHback to top mRNA from alignment at H-elongata_contig20802:313..765- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20802.5990.1 ID=mRNA_H-elongata_contig20802.5990.1|Name=mRNA_H-elongata_contig20802.5990.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=453bp|location=Sequence derived from alignment at H-elongata_contig20802:313..765- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20802:313..765- >mRNA_H-elongata_contig20802.5990.1 ID=mRNA_H-elongata_contig20802.5990.1|Name=mRNA_H-elongata_contig20802.5990.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=546bp|location=Sequence derived from alignment at H-elongata_contig20802:313..765- (Himanthalia elongata Himel1 dioecious)back to top |