mRNA_H-elongata_contig207882.5983.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: A0A8B7EA18_HYDVU (zinc finger BED domain-containing protein DAYSLEEPER-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7EA18_HYDVU) HSP 1 Score: 80.1 bits (196), Expect = 8.980e-17 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 85 EVELLRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
E+EL Y +P P SS +++WW H PLL++V YLA+P SASSER+FS AG+VVT R +L+P++V ++++LH
Sbjct: 16 EIELDTYKGLPR--PDSSNTDIIKWWEAHAKRIPLLFQVARKYLAIPLTSASSERVFSAAGSVVTDSRLKLNPQNVGKIVYLH 96
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: UPI001471CDEF (zinc finger BED domain-containing protein 1-like n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001471CDEF) HSP 1 Score: 82.4 bits (202), Expect = 3.570e-16 Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 1
Query: 85 EVELLRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
E E+ RY Q T G L WW +H+ E+PLL R+ YL +P S SSER+FSTAG++VT +R+ L+PE V +L+FLH
Sbjct: 320 EEEITRYKQ--TAPMSLVGGNPLSWWKEHQTEYPLLSRLAKTYLCIPGTSVSSERVFSTAGDIVTAQRSALNPEHVDQLLFLH 400
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: UPI001113C14C (zinc finger BED domain-containing protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI001113C14C) HSP 1 Score: 77.4 bits (189), Expect = 4.280e-16 Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 97 LRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
LRYD DP EWW H ++PL+ + YL++PA S SSER FSTAGNVVT KRN L+PE+V L+FL+
Sbjct: 48 LRYD----FDP-------FEWWKSHEKKYPLIAELVKKYLSIPATSVSSERCFSTAGNVVTSKRNCLAPENVNMLVFLY 115
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: A0A2S2P4C5_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P4C5_SCHGA) HSP 1 Score: 77.0 bits (188), Expect = 4.320e-16 Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 97 LRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
LRYD DP EWW H ++PL+ +V +L++PA S SSER FSTAGNVVT KRN L+PE+V L+FL+
Sbjct: 31 LRYD----FDP-------FEWWKSHEKKYPLVAKVAKKFLSIPATSVSSERCFSTAGNVVTPKRNCLAPENVNMLVFLY 98
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: UPI002013D797 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013D797) HSP 1 Score: 82.0 bits (201), Expect = 6.520e-16 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 55 TIAARIAQ-KAEVELLRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
T+ R Q +AE E+ RY + P L L WW +H++E+PL+ R+ VYL +P S SSER+FSTAG++VT +R+ LS + V +L+FL+
Sbjct: 567 TVRHRTTQAQAEEEMSRYKEAPPLSLAEGSP--LSWWKEHQNEYPLMSRLAKVYLCIPGTSVSSERVFSTAGDIVTAQRSVLSSKHVDQLLFLN 658
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: A0A1A7XRV2_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XRV2_9TELE) HSP 1 Score: 78.6 bits (192), Expect = 7.250e-16 Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 73 AQKAEVELLRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
A +AE E+ RY +P + L WW + E+PLL R+ YL VP S +SER+FSTAG++VT KR+ LSP+ V L+FLH
Sbjct: 94 AMRAEDEIQRYR---VENPAGLNENPLTWWRSNEREYPLLARLAKQYLCVPGTSIASERVFSTAGDIVTAKRSCLSPDHVNELLFLH 177
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 75.1 bits (183), Expect = 1.010e-15 Identity = 36/61 (59.02%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 151 LEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
L+WW H + +P++ +T VYLA+ A SASSER+FSTAGN+VT KRN LS E+V LIFL+
Sbjct: 3 LKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFLN 63
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: A0A1A8JIY1_NOTKU (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8JIY1_NOTKU) HSP 1 Score: 76.3 bits (186), Expect = 2.300e-15 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 79 KAEVELLRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
+AE E+ Y + P+L P S L WW H+ FPLL R++ YL +P S S+ER+FSTAG+VVT KR+ L P+ V +L+FLH
Sbjct: 54 RAEEEMDNYLKTPSL-PLSEDP--LNWWRVHKVAFPLLARLSERYLCIPGTSGSAERVFSTAGDVVTAKRSTLKPQHVDQLVFLH 135
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: A0A0A1WDS8_ZEUCU (Transposable element Hobo transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WDS8_ZEUCU) HSP 1 Score: 75.9 bits (185), Expect = 3.910e-15 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 148 MLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFLH 333
+L+WW + + +PLL +V +L +PA SA +ER+FS AGNV+T+KRNRL P SV L+FLH
Sbjct: 81 VLKWWGVNENRYPLLSKVALKFLTIPASSAPAERVFSLAGNVITEKRNRLGPTSVDNLLFLH 142
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Match: UPI000CF7E595 (zinc finger BED domain-containing protein 1-like n=1 Tax=Oryzias melastigma TaxID=30732 RepID=UPI000CF7E595) HSP 1 Score: 78.2 bits (191), Expect = 6.000e-15 Identity = 38/91 (41.76%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 58 IAARIAQKAEVELLRYDQVPTLDPGSSGKRMLEWWVDHRHEFPLLYRVTCVYLAVPAISASSERIFSTAGNVVTKKRNRLSPESVQRLIFL 330
+ + KAE EL +Y + P L S + L+WW H FPLL ++ YL +P S ++ER+FSTAG++VT +R+ LSP+ V +L+FL
Sbjct: 196 VPKTTSTKAEEELKKYLEAPPL---SLAENPLKWWSSHEAAFPLLGKLAKRYLCIPGTSVAAERVFSTAGDIVTAQRSNLSPDHVDQLVFL 283 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig207882.5983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig207882.5983.1 >prot_H-elongata_contig207882.5983.1 ID=prot_H-elongata_contig207882.5983.1|Name=mRNA_H-elongata_contig207882.5983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp MEDDDDPNGARESGENPQTIAARIAQKAEVELLRYDQVPTLDPGSSGKRMback to top mRNA from alignment at H-elongata_contig207882:107..439+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig207882.5983.1 ID=mRNA_H-elongata_contig207882.5983.1|Name=mRNA_H-elongata_contig207882.5983.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=333bp|location=Sequence derived from alignment at H-elongata_contig207882:107..439+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig207882:107..439+ >mRNA_H-elongata_contig207882.5983.1 ID=mRNA_H-elongata_contig207882.5983.1|Name=mRNA_H-elongata_contig207882.5983.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=666bp|location=Sequence derived from alignment at H-elongata_contig207882:107..439+ (Himanthalia elongata Himel1 dioecious)back to top |