mRNA_H-elongata_contig20787.5982.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A6H5JGM0_9PHAE (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGM0_9PHAE) HSP 1 Score: 631 bits (1628), Expect = 2.690e-198 Identity = 375/809 (46.35%), Postives = 489/809 (60.44%), Query Frame = 1
Query: 1 PIVQDMRSWSLEDHKGVSRPQVISLRPMLGMDTVFLGGNSFPLTNVDGLSVSAPD-YSTLRQRSRCAELVFTFAGIEVQLGDDRVEDVSLTYDVIDDWTVIAASSAGPRASSGLEIFILPQGSKESDEPR-----------------RSRRRSGKEVPNKNCRGEDADSVSPVGSRSKSSYRIFLGVPDESIALTRNAMEFFWNRRRAELRQPPKPGTTHGRRVASKLTLRGEVRAPTPPKGRVDPVRLEGVEIRPGEEMQRSPKRGQVNLMPNPRAILGVEKKRTLRYNAQARPHWKRVVLHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDP--TSPLSGYAQPMRVWGGNDGGARVMASGKTRFWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFITRE-----------------NILLVTPRSKQLTLVIEHQIEKFMALMHLRLEIQGNYVVASSVPPTPSDCVSTDSPDAPE----------DDESEPRPSLRSRHT-KSMNLATDPGMWVGQIIRT-----------GGRNNPFDFLSGEDFEDGEETDV--------DAQETIESPVLSEVAE-VANGSAS-------DPWGDLLDLSSTHV---VEEKGAPLDGENGALATASLGAKDVTFAWGSSSSPLARIPQSYPPAIPPISEDIGRERGRNAAES 2193
P +Q+MR WS E+H+G+SRPQ+ SLRP MD VFLG N F L+ ++GL++S+ + + RS +LV +FA +EVQL D ++ + +YD IDDW++ GPR SG+ ++++ E E + RR E E+++ +G + R+FLG+PDE +AL RN+ME+FWN RRAELR PPK G+THGR VAS +TLRGEV+AP P GRVDPV L+GVE+R G+ +Q S KRGQ+NL+P+PRA+LGVEKKRTLRYN ARP W+RVV+HQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYY+D S+VPL+ E RRERQ++DLCKVCFLRPEI + +L E+PANAFT+VTT+RQWTL A+S+ ++++WLRM+SVA+DEDVA+VDDGE ++ VK W G QYGPE TVHLGSMGMELR+ + + TS + P + G + + RFWSFTDFYKWT+V+L DGT LA+QCF D+ F RE ++LLVTP +K+L L IEHQ+EKFM+LMHLRLE Q N V S+ T S C + + + E D P + H SMNLATDP +WVG T GG NPFD S E+ DGE V + ++E+P S A V+NG+ + D D L ++S VEEKG L A L D FA ++++ I S P + ED+ R +A+ S
Sbjct: 223 PTLQEMRRWSFEEHEGISRPQLCSLRPKHAMDAVFLGENRFSLSALEGLTLSSTSRIADAQYRSTFGDLVLSFASVEVQLRTDCGKNATFSYDEIDDWSLSVVPGMGPRLPSGIVLWVILPKEGEGQEXXXXXXXXHGRGDAGTYQAKVRREIETEAQVVTVWREESNPR--LGRGGRPCRRVFLGIPDEDLALARNSMEYFWNARRAELRLPPKAGSTHGRCVASMVTLRGEVQAPAVPTGRVDPVDLDGVEVRVGQVVQPSAKRGQLNLLPSPRALLGVEKKRTLRYNGGARPQWERVVVHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYNDVSEVPLYDEARRERQLVDLCKVCFLRPEIGRQKLPAVELPANAFTVVTTQRQWTLAAESRTAVLEWLRMISVAVDEDVAVVDDGEIMFEVKAHWVRQGGQYGPENAGTVHLGSMGMELRFGFSEAAATSLAALATHPKKR-----GSSSASYADNVRFWSFTDFYKWTIVLLQDGTRALALQCFIDDQFKEREVGEWVDFCQIVVLVMDGDMLLVTPNAKRLALAIEHQVEKFMSLMHLRLERQDNMTVTSTSGDTTSTCTAIVARTSSEELIDDGGVLSDGARTPTSTAEGLHRIPSMNLATDPEVWVGDATLTPTAPGRRASDGGGGINPFDSSSDEE-RDGEAAQVRIGHAGSGELDSSLEAPSTSRSASTVSNGNKNPFDFPFCDEGKDSLAVTSRGPRGSVEEKGNE-------LVAAELRPSDTRFATAAAAASATDISGSQSPGL---CEDLFPARPSSASHS 1013
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A482S2P2_9ARCH (PH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2P2_9ARCH) HSP 1 Score: 245 bits (626), Expect = 9.760e-64 Identity = 178/558 (31.90%), Postives = 266/558 (47.67%), Query Frame = 1
Query: 1 PIVQDMRSWSLEDHKGVSRP--QVISLRPMLGMDTVFLGGNSFPLTNVDGLSVSAPDYSTLRQRSRCAELVFTFAGIEVQLGDDRVEDVSLTYDVIDDWTVIAASSAGPRASSGLEIFILPQGSKESDEPRRSRRRSGKEVPNKNCRGEDADSVSPVGSRSKSSYRIFLGVPDESIALTRNAMEFFWNRRRAEL--RQPPKPGTTHGRRVASKLTLRGEVRAPTPPKGRVDPVRLEGVEIRPGEEMQRSPKR-----GQVNLMPNPRAILGVEKKRTLRYNAQARPHWKRVVLHQGWLRKRGG---GAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDPTSPLSGYAQPMRVWGGNDGGARVMASGKTRFWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFITRENILLVTPRSKQLTLVIEHQIEKFMALMHLRLEIQ 1638
P + +MR+ +L+ H+G RP S R + + ++ G N+FPL N G + A Y RS L+ A + G+ V L Y+ + +W V+ + SG+E+ + G I+ GV + I ++ E+FWN + K G+THGR + S TL GEV P PP G VD V +G+ +R G +M +P+R G V+ P+++ N + HW VV+HQGWL K+GG G K WI RYFVLY T QGHFL YY D ++ P++T + R ++DL K F+RP + + P F IVTTER+WTLCA+S+ ++ +WL++L+ A+DEDVAI+ D E ++ VK + P + + + + G+ + DP S DGG R M FW +TDFYKW+ ++ DG L + F D +F R + T +++L IE+ IEKFM++MH+RLE Q
Sbjct: 89 PPLNEMRNSALDLHRGSYRPCPSGESRRMAIALQHIYEGHNTFPLLNARGAASIANQY-----RSDSVLLITNEALVYKPRGEHSEIKVDLLYEDMQEWDVVD-NDKHRVGDSGIEVIMKNSGES-----------------------------------------IYFGV--QFIRDVKHTFEYFWNTYHTSQGNQSAIKLGSTHGRPIVSAHTLSGEVPPPEPPVGHVDIVDQDGLVVRAGGKM--APRRASLAAGVVSTSKEPKSVP--------MENKAVKKHWHNVVMHQGWLLKQGGVGVGTNKSWIKRYFVLYKTSQGHFLVYYSDFTECPMYTAEKNHRNIVDLAKATFIRPG--SNKSDNPDTPPYCFDIVTTEREWTLCAESQENVQRWLQILTRAVDEDVAILPDEELVFKVKPKLDPLQALPATDYTTALKVSANGVSVT--IPDPNS--------------KDGGDREMY-----FWVYTDFYKWS-IMNPDGKYALLVNVFADSSFSRRYEYIFRTKDAQRLATAIEYFIEKFMSVMHIRLETQ 563
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A836CM89_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM89_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.850e-62 Identity = 161/427 (37.70%), Postives = 222/427 (51.99%), Query Frame = 1
Query: 430 CRGEDADSVSPVGSRSKSSYRIFLGVPDESIALTRNAMEFFWNRRRAELRQPPKPGTTHGRRVASKLTLRGEVRAPTPPKGRVDPVRLEGVEIRPGEEMQRSPKRGQVNLMPNPRAILGV---EKKRTLRYNAQARPHWKRVVLHQGWLRKRGGG--AIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSL------------------MQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDPTSPLSGYAQPMRVWGGNDGGARVMASGKTRFWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFITRENILLVTPRSK---QLTLVIEHQIEKFMALMHLRLE 1632
CR A V ++S Y G+P ES+ R A+E+FWN A P G+ GR V S LTL G AP PP+ R++ V ++G +R G M R+P + L +I+ + +KK+ L N HW + VLHQGWL+KR GG A+K IWRYFVLY TPQG FLAYY D +D+PLF +R ER ++DLC V + RP+ S+ P NAF +VTT++ W L A+S +L + WL L A D+ VA+ D + ++ + + PE A++ L +MG+ LR E D G DG + + KT FW FTDF+KWT DG L++QCFTD F ++ +LL+ P S + VIE+ IEKFM +MH+ LE
Sbjct: 356 CREAVASLEITVLGGARSQY----GLPPESVLPARCALEYFWNAAAAACGGAPAAGSALGRDVQSVLTLAGAAHAPPPPRRRLEIVDMDGTTLRHGS-MIRAPGKPASRLKGATTSIMSLGSGDKKQKLETNTPVSTHWDKAVLHQGWLQKRRGGQAAVKTAIWRYFVLYTTPQGPFLAYYADVTDLPLFATSRLERGLVDLCTVQYYRPQS-----SDATAPDNAFDVVTTDKDWALGAESPAALQARGGLGEWGSRLSRADAVAWLAALGRATDQAVALASDEDVMFDCFCRHMTTTQKLSPETRASLSLSAMGVTLR-ETGDE--------------GSIDG---QLKATKTTFWPFTDFFKWTPTTTPDGRKALSLQCFTDGKFKQKQEVLLLFPSSSGAARCASVIEYGIEKFMTMMHMSLE 754
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A7S3HC11_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HC11_9STRA) HSP 1 Score: 223 bits (567), Expect = 7.660e-56 Identity = 143/395 (36.20%), Postives = 209/395 (52.91%), Query Frame = 1
Query: 514 ESIALTRNAMEFFWNRRRAELRQPP--KPGTTHGRRVASKLTLRGEVRAPTPP------KGRVDPVRLEGVEIRPGEEMQRSPKRGQVNLMPNPRAILGVEKKRTLRYNAQARPHWKRVVLHQGWLRKRGG---GAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDPTSPLSGYAQPMRVWGGNDGGARVMASGKTRFWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFITRENILLVTPRSKQLTLVIEHQIEKFMALMHLRLEIQGNYVVASSV 1665
E + ++ EFFWN+ R Q K G+THGR + S TL G++ PP +G + V +G+ +RPG + +P+R +N + E K N + +PHW +VVLHQGWL K+GG G IK WI RYFVLY T QGHFL YY D ++ P++T + R +D+ K F+RP + + P + F IVTTER+WTLCA+S+ + +WL++L+ A+DEDVAI+ D E ++ VK + P G P+T + S+ + + SP G Q + + FW +TDFYKWTL+ G L + F D TF R + + +L IE IEKFM MH+RLE+ + ++A++V
Sbjct: 300 EFVRDVKHTFEFFWNKYRVGRGQSDQVKLGSTHGRPIVSVSTLSGDL----PPSNEHQVQGSSEVVDQDGLIVRPGGRI--APRRASINTG----MMQTKEPKVVPPENREVKPHWHKVVLHQGWLLKQGGVGVGTIKSWIKRYFVLYKTSQGHFLVYYSDFTECPMYTAEKNHRNFVDMAKCTFIRPG--SNKQDNPDTPPHCFDIVTTEREWTLCAESQDNAQRWLKLLTKAVDEDVAILPDEELVFKVKPKVDPLG-----VLPSTDYSTSLKVSAHGISVTTPSPNKGVDQEVEHY----------------FWVYTDFYKWTLLS-QAGKLALLVNVFADATFNRRIEYIFRNKDALRLATAIEFFIEKFMCWMHIRLELMDSTLIAAAV 660
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A7S4E408_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E408_9STRA) HSP 1 Score: 216 bits (551), Expect = 6.140e-54 Identity = 138/376 (36.70%), Postives = 198/376 (52.66%), Query Frame = 1
Query: 532 RNAMEFFWNRRRAELRQPPKPGTTHGRRVASKLTLRGEVRAPTPPKGRVDPVRLEGVEIRPGEEMQRSPKRGQVNLMPNPRAILGVEKKRTLRYNAQARPHWKRVVLHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDPTSPLSGYAQPMRVWGGNDGGARVMASGKTR---FWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFIT--RENILLVTPRSKQLTLVIEHQIEKFMALMHLRLEIQGN 1644
++A+E FWNR RA QPPKP +THGR + + TL GE++AP P G ++ G +R + + ++ + ++ +K + N + R HW VV+HQGWL K+GG A K WI RY VLY T GHFL YY D + PL+ E RER++IDLCKV F+RP + ++P N+F I T ER+WTL A+SK S+ +WL++++ AIDED AIV D E ++ VK + P E + + + G+ + V A+ + FW +TDF+KW+ ++ H G GL + FT F R L T + +L IE IEKFM++MHL LE N
Sbjct: 312 KDAIEHFWNRHRAP--QPPKPQSTHGRDIVTVTTLHGEIKAPPKPVGDLEITDEVGTLVRSSGTAHGGVAKRKSTIIGS---MVKGKKPTGWQENERVRKHWDSVVVHQGWLLKKGGLA-KSWIKRYAVLYRTAMGHFLCYYADFAKSPLYHEEERERRIIDLCKVTFVRPVS-----NHDDVPPNSFDICTIEREWTLSAESKASMQRWLQIVTRAIDEDTAIVPDDELVFTVKPRVDPSQQLVKNEYSTALKVSASGVSV---------------------------CAVTAADELVERFFWCYTDFFKWS-ILHHSGKTGLQVSVFTSADFDVKDRHEFLFRTRDAVKLATAIEFYIEKFMSIMHLYLEGTDN 648
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A7S2RWY5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RWY5_9STRA) HSP 1 Score: 203 bits (517), Expect = 9.550e-50 Identity = 131/376 (34.84%), Postives = 192/376 (51.06%), Query Frame = 1
Query: 514 ESIALTRNAMEFFWNRRRAELRQPPKPGTTHGRRVASKLTLRGEVRAPTPPKGRVDPVRLEGVEIRPGEEMQRSPKRGQVNLMPNPRAILGVEKKRTLRYNAQARPHWKRVVLHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDPTSPLSGYAQPMRVWGGNDGGARVMASGKTR--FWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFITRENILLVTPRSKQLTLVIEHQIEKFMALMHLRLEI 1635
E I R + EFF NR R P +PGTTHGR V TL GEV A P G + + + I G QR K+ +++ ++ Q + HW +VV H GWL K+GG A K W+ RYFVL++T QGHFL+YY + D PL+ R++R +IDL K+ +LR + ++P +F I T ER+WTLCA+S L WL++L+ A+DEDVAIV D + VK + P + + + S G+ ++ +V S + FW +TDFYKW+++ H G L++Q FT F T+E+ + + S+ + IE+ IEKFM+ MH+R E+
Sbjct: 317 EDIMHLRVSFEFFLNRFRHGKGLPAEPGTTHGRSVVGTHTLMGEVPAAEPATGVTEVLDEDNQPIH-GRPAQR--KKSIFGXXXXXPSLIPLQ---------QVKGHWSKVVNHNGWLLKKGG-ATKTWLKRYFVLFETCQGHFLSYYAEFWDSPLYNMNRKQRNMIDLSKIVYLRA-----KSKHRDVPPFSFDIATIEREWTLCAESSEQLQLWLQLLASAVDEDVAIVPDDTLSFAVKARADPTDRLERGDYSTVLQISSWGVSVQ---------------------------KVKGSEREEVFFWCYTDFYKWSILKQH-GKMALSVQIFTTGDFKTKEDFIFRSTESQAIATAIEYYIEKFMSRMHIRREL 646
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A7S2GJS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJS5_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.260e-25 Identity = 104/364 (28.57%), Postives = 155/364 (42.58%), Query Frame = 1
Query: 1 PIVQDMRSWSLEDHKGVSRPQVISL--RPMLGMDTVFLGGNSFPLTNVDGLSVSAPDYSTLRQRSRCAELVFTFAGIEVQLGDDRVEDVSLTYDVIDDWTVIAASSAG-PRASSGLEIFILPQGSKESDEPRRSRRRSGKEVPNKNCRGEDADSVSPVGSRSKSSYRIFLGVPDESIALTRNAMEFFWNRRRAELRQPPKPGTTHGRRVASKLTLRGEVRAPTPPKGRVDPVRLEG---------VEIRPGEEMQRSPKRGQVNLMPNPRAILGVEKKR----TLRYNAQARPHWKRVVLHQGWLRKRGGGAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFTETRRERQVIDLCKVCFLRP 1044
P + MR +L H+G +P S R L ++ + GG +F + V G+ +SA L ++Q+ ++ + T+D + D+ ++ + G P+A G+ F PN + GE + + + V + + L A+EFF+NR + K TTHGRRV TL GE+ P P+G + ++G I+PG P RG R +L + + N +A HW V HQGWL K+GG K W RY VLY T QGHFL YY D +D PL++ + ER +IDL K F+RP
Sbjct: 74 PSLATMRQLALSSHQGSGKPVPTSASRRLQLAIEHIHKGGQTFAIKEVVGIDLSA------------RPLELRLDNEDIQVVSKGIKQWAATWDDLIDYEIVDSMHLGDPKA--GIRFFF----------------------PNSDKDGE---------------FDVLVIV--QEVRLLMYAVEFFYNRMLETKGKVAKKQTTHGRRVVKMHTLTGEIIPPAYPQGNLTITDMDGHLIRPANAGSNIKPGFAASSGPARGNTGRR---RTLLARVTNQGSGGVVHENREATGHWNTVCKHQGWLLKKGG-RTKTWQKRYAVLYSTAQGHFLCYYSDYTDSPLYSTQQAERNIIDLSKTTFIRP 380
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A7S3HBT1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBT1_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.840e-24 Identity = 75/222 (33.78%), Postives = 116/222 (52.25%), Query Frame = 1
Query: 1003 RQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVKVQWSPDGNQYGPECPATVHLGSMGMELRWEYLDPTSPLSGY-AQPMRVWGGNDGGARVMASGKTRFWSFTDFYKWTLVVLHDGTPGLAIQCFTDETFITRENILLVTPRSKQLTLVIEHQIEKFMALMHLRLEIQGNYVVASSV 1665
R +DL K CF+RP + + PA+ F IVT ER+WTLCA++ + QWL++L+ A+DEDVAI+ D E ++ VK + P G + ++ + + G+ + T+P+ G Q + + FW +TDFYKWTL+ G L + F D TF R + + +L IE IEKFM MH+RLE+ + ++A++V
Sbjct: 2 RTFVDLAKCCFIRPG--SNKQDNPDTPAHCFDIVTVEREWTLCAENADNEQQWLKLLTKAVDEDVAILPDEELVFKVKPKVDPLGILPSNDYSTSLKVSAHGISV-------TTPVMGKEGQELEHY----------------FWVYTDFYKWTLLS-QAGKLALLVNVFADATFNRRIEYIFRNKDALRLATAIEFFIEKFMCWMHIRLELMDSTLIAAAV 197
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: A0A7S3HBI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBI0_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.330e-18 Identity = 66/166 (39.76%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 514 ESIALTRNAMEFFWNRRRAELRQPP--KPGTTHGRRVASKLTLRGEVRAPTPPK---GRVDPVRLEGVEIRPGEEMQRSPKRGQVNLMPNPRAILGVEKKRTLRYNAQARPHWKRVVLHQGWLRKRGG---GAIKRWIWRYFVLYDTPQGHFLAYYHDASDVPLFT 987
E + ++ EFFWN+ R Q K G+THGR + S TL GEV A TP G + ++G + G ++ +P+ + +P P N + +PHW +VVLHQGWL K+GG GA K WI RYFVLY T QGHFL YY D ++ P++T
Sbjct: 300 EFVRDVKHTFEFFWNKYRVGRGQSDQVKLGSTHGRPIVSLTTLSGEVAA-TPDMDVLGITEVRDIDGSTVHVGGKL--APRTTRAEQLPVPPI------------NREVKPHWHKVVLHQGWLLKQGGIGVGASKSWIKRYFVLYKTSQGHFLVYYSDFTECPMYT 450
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Match: W7TSD8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSD8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.500e-11 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 997 RERQVIDLCKVCFLRPEICQPRLSECEIPANAFTIVTTERQWTLCADSKVSLMQWLRMLSVAIDEDVAIVDDGEALYHVK 1236
+ER VID C+V FLRP P + P+ AF + + ER WTLCA ++ L QWL +L+ AID DVA++ D E + VK
Sbjct: 25 QERNVIDCCRVEFLRPVSSTP-----DTPSCAFDVQSIERTWTLCAANETDLQQWLLLLASAIDMDVAVLPDDEVSFLVK 99 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20787.5982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20787.5982.1 >prot_H-elongata_contig20787.5982.1 ID=prot_H-elongata_contig20787.5982.1|Name=mRNA_H-elongata_contig20787.5982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1151bp MRSWSLEDHKGVSRPQVISLRPMLGMDTVFLGGNSFPLTNVDGLSVSAPDback to top mRNA from alignment at H-elongata_contig20787:2014..6470- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20787.5982.1 ID=mRNA_H-elongata_contig20787.5982.1|Name=mRNA_H-elongata_contig20787.5982.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4457bp|location=Sequence derived from alignment at H-elongata_contig20787:2014..6470- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20787:2014..6470- >mRNA_H-elongata_contig20787.5982.1 ID=mRNA_H-elongata_contig20787.5982.1|Name=mRNA_H-elongata_contig20787.5982.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6906bp|location=Sequence derived from alignment at H-elongata_contig20787:2014..6470- (Himanthalia elongata Himel1 dioecious)back to top |