mRNA_H-elongata_contig207852.5979.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A8F0JZE5_9PHAE (CF0 subunit I n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZE5_9PHAE) HSP 1 Score: 313 bits (801), Expect = 2.520e-107 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD
Sbjct: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A0R6LZW8_UNDPI (ATP synthase subunit b, chloroplastic n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6LZW8_UNDPI) HSP 1 Score: 276 bits (707), Expect = 5.330e-93 Identity = 152/174 (87.36%), Postives = 161/174 (92.53%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MKSYLEY S+ENFGV+LNTDIFETNIINI LLLVILFVVIKNFL ENLTARKKKIVD IQNAE RL+DSNKRY EAKKQWAQMDIIIKEINHQME TKQN+LKLKW+Q KEDLSKKFTTAI VLRNRE+KIFNDVIKEVS+KALNRVI KL++QLGK EQSAIVNRKI QLGD
Sbjct: 1 MKSYLEYFASSENFGVTLNTDIFETNIINIILLLVILFVVIKNFLTENLTARKKKIVDDIQNAETRLADSNKRYTEAKKQWAQMDIIIKEINHQMEVTKQNVLKLKWEQGKEDLSKKFTTAIAVLRNRENKIFNDVIKEVSKKALNRVIFKLQKQLGKAEQSAIVNRKITQLGD 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A6B7EYT6_9PHAE (ATP synthase CF0 subunit B n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYT6_9PHAE) HSP 1 Score: 261 bits (667), Expect = 6.610e-87 Identity = 143/174 (82.18%), Postives = 159/174 (91.38%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MKSY++Y +SNENFGV+LNTDIFE+NIINI LLLVILFVVIK FL ENLTARK KIV+ I+NAE RL+DSNKRY EAKKQWAQMDIIIKEIN QMETTKQN+LKLKWDQ K+DLSKKFTTAI VLRNRE+KIFNDVIKEVS+KAL +V+LKLK+QLGK EQSAIVN KI QLG+
Sbjct: 1 MKSYIQYFVSNENFGVTLNTDIFESNIINIILLLVILFVVIKKFLTENLTARKNKIVEGIENAETRLADSNKRYSEAKKQWAQMDIIIKEINQQMETTKQNVLKLKWDQGKDDLSKKFTTAILVLRNRENKIFNDVIKEVSKKALTQVVLKLKKQLGKAEQSAIVNLKITQLGE 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A8F0JYG4_9PHAE (CF0 subunit I n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYG4_9PHAE) HSP 1 Score: 259 bits (663), Expect = 2.690e-86 Identity = 139/174 (79.89%), Postives = 157/174 (90.23%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MK+YLE+ S EN G+ LNTDIFETNI+NIA+LLVILF+VIKNFL ENLTARKKKIVD I+NAE RL+DSNKRY EAKKQWAQMDIII EIN QME TKQN+LKLKW+Q K+DL+KKFT AI VLRNRE+KIFND+IKEVS+KALNRVI K+K+QLGKVEQSAI+NRKI QLGD
Sbjct: 1 MKNYLEFFTSTENLGIGLNTDIFETNIVNIAILLVILFIVIKNFLTENLTARKKKIVDGIENAETRLADSNKRYTEAKKQWAQMDIIIGEINDQMEKTKQNVLKLKWEQGKDDLAKKFTLAISVLRNRETKIFNDIIKEVSKKALNRVIFKVKKQLGKVEQSAIINRKIMQLGD 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: D1GJI0_FUCVE (ATP synthase subunit b, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJI0_FUCVE) HSP 1 Score: 249 bits (637), Expect = 2.450e-82 Identity = 131/174 (75.29%), Postives = 157/174 (90.23%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MKSY++YII+NENF +S+NTDIFETNIIN+ +LL +LFVVIKNFL ENLT RKKKI+ I+NAE RL+DSNKRYVEA+KQW+QMDII+KEIN QMETTKQ++LKL+WDQAKEDLSKKF AI +LRNRE+KIFND+IKEVS+KAL RV K+K QLGK+EQSAI++RKI Q+GD
Sbjct: 1 MKSYIDYIIANENFEISINTDIFETNIINLIILLGVLFVVIKNFLTENLTTRKKKIISDIENAETRLADSNKRYVEAQKQWSQMDIILKEINQQMETTKQSVLKLRWDQAKEDLSKKFIVAIEILRNRENKIFNDLIKEVSKKALTRVTRKIKNQLGKIEQSAIIDRKITQIGD 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A1I9LVV0_9PHAE (ATP synthase CF0 B chain subunit I n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVV0_9PHAE) HSP 1 Score: 242 bits (617), Expect = 2.710e-79 Identity = 131/174 (75.29%), Postives = 155/174 (89.08%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MK+Y++Y +S N GV+LNTDIFETNI+NI LLL ILFVVIKNFL ENLT RKKKIV+ I+NAE RL DSNKRY EAKKQW+Q+DI+IKEIN QMETTKQN+LKLKW+Q K+DLSKKFTTAI VLRNRE+KIFNDV+KEVS+KAL +VIL LK++LGK+EQSAI++ KI QLG+
Sbjct: 1 MKNYIQYFVSTGNLGVTLNTDIFETNIVNIFLLLAILFVVIKNFLTENLTIRKKKIVEDIENAETRLYDSNKRYSEAKKQWSQIDIVIKEINQQMETTKQNVLKLKWNQGKDDLSKKFTTAIIVLRNRENKIFNDVMKEVSKKALTQVILNLKKRLGKLEQSAIIDLKITQLGE 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: D1J795_ECTSI (ATP synthase subunit b, chloroplastic n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J795_ECTSI) HSP 1 Score: 238 bits (607), Expect = 7.640e-78 Identity = 137/174 (78.74%), Postives = 151/174 (86.78%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
M SY++Y S VSLNTD+FETNIINI LLL ILFVVIK FL ENLTARK+KIV I+NAE RL+DSNKRY EAKKQW+QMDIIIKEI QMETTKQN+LKLKWDQ K+DLSKKFTTAI VLRNRE+KIFNDV KEVS+KALN+VILKLK+QLGKVEQSAIVN KI QLG+
Sbjct: 1 MNSYIQYFAS-----VSLNTDLFETNIINIILLLGILFVVIKKFLTENLTARKEKIVQGIENAETRLADSNKRYNEAKKQWSQMDIIIKEITQQMETTKQNVLKLKWDQGKDDLSKKFTTAIVVLRNRENKIFNDVTKEVSKKALNQVILKLKKQLGKVEQSAIVNMKITQLGE 169
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A1L2F1U0_9PHAE (AtpF n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1U0_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.260e-76 Identity = 131/176 (74.43%), Postives = 154/176 (87.50%), Query Frame = 1
Query: 1 MKSYLEYII--SNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MKSY++ II SNE+F +SLN DIFETNIINI LLL ILFVVIKNFL ENLT+RK+KI+++I+NAE +L+DSN RY+EA+KQWAQMDII+KEIN QME TK+N+LKLKW++ KEDLSKKFT AI +L NRE+KIF DVIKEVS+KALNRV KL QLGKVEQSAI+NRKI QLGD
Sbjct: 1 MKSYIDCIIANSNEDFNISLNPDIFETNIINIILLLGILFVVIKNFLTENLTSRKEKIIENIENAETQLTDSNNRYIEAQKQWAQMDIIVKEINQQMEITKRNLLKLKWNKTKEDLSKKFTIAIEILHNRENKIFADVIKEVSKKALNRVTSKLVNQLGKVEQSAIINRKIAQLGD 176
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A8F0F814_9PHAE (CF0 subunit I n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F814_9PHAE) HSP 1 Score: 228 bits (582), Expect = 5.760e-74 Identity = 122/174 (70.11%), Postives = 150/174 (86.21%), Query Frame = 1
Query: 1 MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
MK+YLEY+ +E FG +LNTDIFETN+IN+ LLLV+LFVVIKNFLK+NL ARKKKIV+ + A +RL+DS KRY EA KQW+Q+++II+EINHQM+ TK NI+ +KW QAKEDLSK+F AIG+LR+RE KIFN++IKE+SQKAL RV+LKLK QLG VEQS IVNRK+KQLGD
Sbjct: 1 MKNYLEYLAFSETFGFTLNTDIFETNVINLGLLLVLLFVVIKNFLKDNLNARKKKIVEDLDKAGSRLTDSAKRYDEAIKQWSQVNMIIREINHQMKKTKLNIVTIKWTQAKEDLSKRFVIAIGILRSREKKIFNEIIKEISQKALTRVVLKLKNQLGDVEQSEIVNRKLKQLGD 174
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Match: A0A8E5XRA6_9PHAE (ATP synthase subunit b, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRA6_9PHAE) HSP 1 Score: 180 bits (457), Expect = 7.650e-55 Identity = 101/175 (57.71%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 1 MKSYLEYII-SNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTARKKKIVDSIQNAENRLSDSNKRYVEAKKQWAQMDIIIKEINHQMETTKQNILKLKWDQAKEDLSKKFTTAIGVLRNRESKIFNDVIKEVSQKALNRVILKLKQQLGKVEQSAIVNRKIKQLGD 522
M +++ YII +NENF V++NTDIFETN+INI LLL++LF+V+ NFLKE+L +RKKKI ++NAE RL ++ KRY EA+KQW+Q+ I+I++I Q + TKQNILK+K + AK+DLSKKF A +LR RE K F+DVIKEVS++AL +V++KL+++LG+ EQ +VN KIK L D
Sbjct: 7 MINHMYYIILANENFSVTINTDIFETNVINIILLLIVLFLVLSNFLKESLGSRKKKITTDVENAEERLVEAKKRYKEAEKQWSQIQIVIEDIYQQAQQTKQNILKVKCNIAKQDLSKKFGAATTILRYREQKTFDDVIKEVSERALKKVVIKLQKELGEKEQIDLVNSKIKLLED 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig207852.5979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig207852.5979.1 >prot_H-elongata_contig207852.5979.1 ID=prot_H-elongata_contig207852.5979.1|Name=mRNA_H-elongata_contig207852.5979.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp MKSYLEYIISNENFGVSLNTDIFETNIINIALLLVILFVVIKNFLKENLTback to top mRNA from alignment at H-elongata_contig207852:156..680- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig207852.5979.1 ID=mRNA_H-elongata_contig207852.5979.1|Name=mRNA_H-elongata_contig207852.5979.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=525bp|location=Sequence derived from alignment at H-elongata_contig207852:156..680- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig207852:156..680- >mRNA_H-elongata_contig207852.5979.1 ID=mRNA_H-elongata_contig207852.5979.1|Name=mRNA_H-elongata_contig207852.5979.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig207852:156..680- (Himanthalia elongata Himel1 dioecious)back to top |