mRNA_H-elongata_contig20756.5964.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20756.5964.1
Unique NamemRNA_H-elongata_contig20756.5964.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20756.5964.1 vs. uniprot
Match: D7FJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS3_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 4.420e-41
Identity = 102/180 (56.67%), Postives = 112/180 (62.22%), Query Frame = 2 
Query:  329 QEITPETRYDQLPEAARKSIDGLAVEIKRQRSVADEVSRTNPTHGLELQAQIRQLRRELLDLGNEQETQKLGLHNLKDDADRTVKQAEVHGTFVVQRMHSQSGLNTVEQLPSAYMREMADSFEKRLIEYAQEISAIKQQLSDEPLQGGGEVQPLPYGQRARVTPERLAFVIREQWKTFNQ 868
            Q ITPETRYDQLPE  RK ID LA EIKRQR VADEVSRTNPT GL +QAQIR+LRR+LLDLGNEQ TQKL + +LK DA +T +QAE                                           EI A++ QLS+EPLQGG    P  YGQRARVTP RLAFVIREQ KTFNQ
Sbjct:  163 QGITPETRYDQLPEVVRKQIDQLAEEIKRQRGVADEVSRTNPTDGLAVQAQIRELRRDLLDLGNEQGTQKLAMKDLKADAGKTSRQAE-------------------------------------------EIHAMQVQLSEEPLQGGEATAP--YGQRARVTPGRLAFVIREQMKTFNQ 297
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BLAST of mRNA_H-elongata_contig20756.5964.1 vs. uniprot
Match: A0A6H5KNK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK5_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 7.200e-32
Identity = 73/93 (78.49%), Postives = 79/93 (84.95%), Query Frame = 2 
Query:  743 QLSDEPLQGGGEVQPLPYGQRARVTPERLAFVIREQWKTFNQIAGHAAVAHEQIEALRQSYKQQFKDDPFEAAERQERAAERRLLKQMRDQAP 1021
            QLS+EPLQGG    P PYGQRARVTP RLAFVIREQ KTFNQIAGHAAV HE++E LRQ YK ++KDDPF+AAERQ RAAER L KQMRDQAP
Sbjct:    4 QLSEEPLQGGEA--PAPYGQRARVTPGRLAFVIREQMKTFNQIAGHAAVVHEKVEVLRQQYKLKYKDDPFQAAERQARAAERHLHKQMRDQAP 94
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BLAST of mRNA_H-elongata_contig20756.5964.1 vs. uniprot
Match: A0A087UL25_STEMI (Nucleoporin p58/p45 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UL25_STEMI)

HSP 1 Score: 58.5 bits (140), Expect = 4.280e-5
Identity = 50/218 (22.94%), Postives = 99/218 (45.41%), Query Frame = 2 
Query:  284 ATGGFGAAPAAVTPGQEITPETRYDQLPEAARKSIDGLAVEIKRQRSVADEVSRTNPTHGLELQAQIRQLRRELLDLGNEQETQKLGLHNLKDDADRTVKQAEVHGTFVVQRMHSQSGLNTVEQLPSAYMREMADSFEKRLIEYAQEISAIKQQLSDEPLQGGGEVQPLPYGQRARVTPERLAFVIREQWKTFNQIAGHAAVAHEQIEALRQSYKQQF 937
            ATG  GA+ +    G+ +    +  Q+P     +++     +K Q+++ +E+SR +  +   +Q Q+  LR++L  + N  +   + +  LK+++++ +K AE+      +   S S L      P+ Y   +A+SFEK++  Y Q+I  +++ L             L   Q   +TP     + R     F  +A      H+++    Q YK+ F
Sbjct:  151 ATGLNGASTSQKKDGKAV----KEAQIPNEISVTVESFKKYVKEQKAIREEMSRVSSKNIFRVQEQVVALRQQLSVVSNGLQRNAIAIAKLKEESNQELKNAEI----AQRTKDSPSSLQYENNAPTEYFHNLANSFEKQMQSYRQQIEQLERHL-------------LSLSQPYTLTPNEWTAIRRRLHDVFVTLAAQLQTIHQEV----QVYKEHF 343
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20756.5964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJS3_ECTSI4.420e-4156.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNK5_9PHAE7.200e-3278.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A087UL25_STEMI4.280e-522.94Nucleoporin p58/p45 (Fragment) n=2 Tax=Stegodyphus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20756contigH-elongata_contig20756:561..6669 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score61.6
Seed ortholog evalue1.2e-06
Seed eggNOG ortholog159749.K0TB43
KEGG koko:K10443,ko:K14309
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
KEGG ModuleM00427
EggNOG free text desc.Nucleoporin FG repeat region
EggNOG OGs2XFHG@2836,KOG0845@1,KOG0845@2759
COG Functional cat.UY
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleoporin FG repeat
Ec32 orthologEc-06_010380.1
Exons6
Model size2869
Cds size1569
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20756.5964.1prot_H-elongata_contig20756.5964.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20756 592..5400 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930160.0763466-UTR-H-elongata_contig20756:560..5911622930160.0763466-UTR-H-elongata_contig20756:560..591Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20756 561..591 +
1691679304.2837253-UTR-H-elongata_contig20756:560..5911691679304.2837253-UTR-H-elongata_contig20756:560..591Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20756 561..591 +
1622930160.172319-UTR-H-elongata_contig20756:5400..66691622930160.172319-UTR-H-elongata_contig20756:5400..6669Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20756 5401..6669 +
1691679304.3475423-UTR-H-elongata_contig20756:5400..66691691679304.3475423-UTR-H-elongata_contig20756:5400..6669Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20756 5401..6669 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930160.091843-CDS-H-elongata_contig20756:591..6891622930160.091843-CDS-H-elongata_contig20756:591..689Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 592..689 +
1691679304.2942204-CDS-H-elongata_contig20756:591..6891691679304.2942204-CDS-H-elongata_contig20756:591..689Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 592..689 +
1622930160.1060073-CDS-H-elongata_contig20756:1707..19921622930160.1060073-CDS-H-elongata_contig20756:1707..1992Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 1708..1992 +
1691679304.302046-CDS-H-elongata_contig20756:1707..19921691679304.302046-CDS-H-elongata_contig20756:1707..1992Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 1708..1992 +
1622930160.1176655-CDS-H-elongata_contig20756:2344..24591622930160.1176655-CDS-H-elongata_contig20756:2344..2459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 2345..2459 +
1691679304.3103054-CDS-H-elongata_contig20756:2344..24591691679304.3103054-CDS-H-elongata_contig20756:2344..2459Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 2345..2459 +
1622930160.129701-CDS-H-elongata_contig20756:3666..38581622930160.129701-CDS-H-elongata_contig20756:3666..3858Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 3667..3858 +
1691679304.3200238-CDS-H-elongata_contig20756:3666..38581691679304.3200238-CDS-H-elongata_contig20756:3666..3858Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 3667..3858 +
1622930160.1435077-CDS-H-elongata_contig20756:4320..44671622930160.1435077-CDS-H-elongata_contig20756:4320..4467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 4321..4467 +
1691679304.3292775-CDS-H-elongata_contig20756:4320..44671691679304.3292775-CDS-H-elongata_contig20756:4320..4467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 4321..4467 +
1622930160.1550157-CDS-H-elongata_contig20756:4668..54001622930160.1550157-CDS-H-elongata_contig20756:4668..5400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 4669..5400 +
1691679304.3404489-CDS-H-elongata_contig20756:4668..54001691679304.3404489-CDS-H-elongata_contig20756:4668..5400Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20756 4669..5400 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20756.5964.1

>prot_H-elongata_contig20756.5964.1 ID=prot_H-elongata_contig20756.5964.1|Name=mRNA_H-elongata_contig20756.5964.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=523bp
MSFLGFAAPAPAAGGFLFGSTSTPAPAPAGTFSFKTASTASTPAPASSFG
FGTPAPAPTSGVFGSTPAPSSSAFGFGAPATAPAATGGFGAAPAAVTPGQ
EITPETRYDQLPEAARKSIDGLAVEIKRQRSVADEVSRTNPTHGLELQAQ
IRQLRRELLDLGNEQETQKLGLHNLKDDADRTVKQAEVHGTFVVQRMHSQ
SGLNTVEQLPSAYMREMADSFEKRLIEYAQEISAIKQQLSDEPLQGGGEV
QPLPYGQRARVTPERLAFVIREQWKTFNQIAGHAAVAHEQIEALRQSYKQ
QFKDDPFEAAERQERAAERRLLKQMRDQAPPQAETAPAPTPPAAAASQCV
TFGTPAPASSALAFGTTPAPSAFGTSAFGTSAPAPSAFGTTPAPAALAFG
TTPAPSAFSTTPVPAPSAFRTFAATTAPAPSASGLFGTPAPAPKPAGGLF
GAAPAFGTPTPGLFTSAPATPASAFSGTPAPAPTSGFGLFASKAAPAPST
SFTSSTKKKNKGNSRNRRGGGY*
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mRNA from alignment at H-elongata_contig20756:561..6669+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20756.5964.1 ID=mRNA_H-elongata_contig20756.5964.1|Name=mRNA_H-elongata_contig20756.5964.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6109bp|location=Sequence derived from alignment at H-elongata_contig20756:561..6669+ (Himanthalia elongata Himel1 dioecious)
CTCTAGGTAGAGAGGCTACTTTTCATCCTCCATGAGCTTCCTCGGTTTTG
CCGCTCCTGCTCCTGCCGCAGGAGGTTTCTTGTTCGGTAGTACATCTACC
CCCGCTCCTGCTCCAGCAGGAACATTCAGGTGAAAAAAACTAGCTAGCGA
TACCAGGTAGACGTACTGTAATCAAGGAGCATCACACACATTTTGTTTTT
TGGTACCCTGGGCGAGAGGTCCAGTCCAGGTCCAGTCCCGAATTTCGAAA
AGCCGGTCAAGTGTTTGGTTACAGCTATACCCCTTCTTACCGAGCAGTAT
CTGGCTGGCTAACTTATCACTTTTTTTGGAGTGCCGACATCTCGAGCTTA
CCACTCCCGAGAACCCTGTGAGACCATGGGAGTACAGAAACATGGGACTA
CTGTGCAGGAACAAATAGACCTTCGGGATTCGCATGTGATTTCCTTTTGC
AGTATTGTTGAGGTAACAGAGCTTTCCCACTCATTAAAACCCTCCGAGCA
CCCACACCTTATTTGCACCCCGTAGCCCTGGTCCACACATATCTGATTGG
CCAACTTATCTCGCTTGATCTTGTCATCATTTACTTTCACCCGGGAAAAC
TTGGAGCTAATCCTATCTCTTCCTCGGGAAACCACCCAGTACGATTTGAA
AATCGACGCCAGTACGCCAGTGAAGTCAATCAAGGTCAAGGCGCAGGACT
TCATTGACGAAATATAACAATAATATTCAACATACACGTTATGACACGGA
GATTTAACCGCATGAGCTCGGTTTCTTTGAAGTAGTTAATATACTGCTAG
TCGCGCGTCGCTCCTCCCCCTCGCTATGGTGGTGATCCTGTCGCATGGGT
GTCTACGTGGCCACAAGGCCCTGAACGGGCAACGTCGCACTGTCGTTGGT
AGGTTTTATGGCCTGCTAGTATTTTTATTATAAAAACCTTGAACTCATTC
CAACCCTCTGAGTATGTTGAACGGTCCTCATCGCCAGAAATTCAAAATAC
AGTAACAAATTACTGCAATTTAGTTTAGTTTTTATCCAAAAGCAAAGTTT
CGTTGATTTATTTTTACAACGTATCACCACTGTCTAATTTTTCTTCCCTA
TCTTATGTCGCCCTTGATCCCTTCCCCATGTTTCCCGTTGTTCCCAGCTT
TAAAACCGCAAGCACCGCGTCAACCCCGGCCCCTGCCTCTTCCTTCGGGT
TTGGCACGCCTGCCCCCGCCCCGACATCAGGCGTCTTTGGTAGCACGCCC
GCGCCGTCTTCTTCCGCTTTCGGGTTTGGTGCCCCCGCCACCGCACCCGC
AGCGACTGGGGGATTCGGAGCAGCACCCGCGGCGGTAACGCCAGGGCAGG
AGATCACCCCGGAGACTCGATATGATCAGCTTCCGGAGGCGGCGAGGAAG
AGCATTGATGGATTGGCGGTGGAGATCAAGAGGTAACGACAGTTCTTGTC
TGGAATTTTCGTGGTGTCGATTTGCGGGAACTTAAGTCTCAGTCGTTACA
TAGTTTTCGCTCTCGTACTTTTGTATATACAAAGCAAGAGGAATGCATAG
TGCTATTGAGAGCAGTGTCCCTACCTGCCGTCGAGGTCACGGGTTCCTTT
TCTGCAGGCTCTCGAGCCAAGCCTGCTTTCGGCCGCCTTGCCCCCCTTAT
CGTACCCCTTATGGAACTGGATTTCAAGTTTTATATTGAATTTAGTATGT
AAAAAAACAGATCGAGTTCCATAGGGGTTAATATGGTAATCGCTTCGCGG
ATTTGGGGGTGGTGGGATTGCACTGTTAACGCAGGCAACGAAGCGTAGCG
GATGAAGTCAGCAGGACGAACCCGACCCACGGTCTTGAGCTGCAGGCGCA
GATACGGCAGCTGCGAAGAGAGCTACTGGACCTCGGAAACGAGCAAGAGG
TACGAGGGCCGGCATGCATGTGTCGCGATCATGTTCGAGAATCAGATTCA
AGACATACAGGCACCGCGGGCTTATTTGCACACGTCAGTTAGTCAACGCC
TAAGAGTAGCTTGTCATGGGACGGCAGGGCCACCGTATCCATCGTTTTTG
CCGGTTCCTCTCGTGCATCCTGCTACCATCAAGATCAAGCGCGACCTGCT
ACCAAGATGGACGTGAAACATGTAGCTATTTTTTTCATCGTGCGATCGAG
TAGAATACTGGGGACGTCTTTACGTCTACCCTTGCGCGGTATTCCTGGCT
TAAATAGATCCATAGATCCATATCGAGATGGGCGCCCTAGACGGAGATGA
GATGCTCAAATCCGTACGAATGGGTTTAAACCGCCCCGCCAAGGAAGCTC
GGGCTGGCGTGTAACGCCTCGTTGTGCGCTCACAAGATTTCCTCATCTGG
CGGCTTATGTATTTTTCGAGGTATCCTCTTTAGACGGGAAGAAGAGTATT
AGACGGGAAGAAGAGTCTTGCATTTACCCCAGAAACAATCGCCGCCATCG
CGGCCAACTAGCATCTAAATCACAGCTTTTTTGAAGTGCCTACAAGGTAG
TTAACAGTATAGTATTTCCGCTATAGGGAGAAGCACCTCTACCATATGGA
GTGCGGGAGTCTCGCCGTGGTATACCTCGTCGTGTCCCAGCACTTTAAAG
CACAAAGAGAGACAAACTACGAACGAACTGCAAGTGGAGGGTCAGCTCTC
TTGCTTTGTTTTTTAAATGTTTTTCGGTCGAGAATGATTGCGAAATTCTT
CAGTAGAGCCCTTTCCAGGTGGACAAGCTTAGCGACTGGCTACACGGGCC
AGCTCGACGGTTTTAGCGTTGCTGCCCAAGGTGCTTGCTGCAGCTGCAGT
AGATGGCGAATCCCCTGCTCTGGCGAGATTTCGCACCGAACTCACCACCC
TTTAAACTGTCGAAGTTGCACCACACACGTTTTTTACACGATACGTCCAG
CGAAAAAATCATTTGCCACCTGTCGGCGCTTTAAGCCTTGAGGTTTGCCG
TGGTCATGGTCATCACTTCCGCGTGAAGGATCGGCCACCTTGTGGAGGCC
GTCCTATTTACCGTATAGTTGTAGCCTGCAATGCCTAGGTGGAGGTGCCT
TCCAACCACTGCCCCTCCACCACCCTATCGACGGCGACATTTGGTCCTTT
CCGCAGACCCAGAAGCTCGGTCTCCATAATTTAAAGGATGACGCCGACCG
AACCGTAAAGCAAGCGGAGGTACACGGAACGTTTGTGGTTCAGCGTATGC
ACAGCCAGTCGGGCCTCAACACCGTAGAGCAGCTGCCGAGTGCCTACATG
CGGGAGATGGCGGATAGCTTCGAAAAGCGACTTATCGAGTACGCGCAGGC
AAGGCCGATCGCTTCGGAGTTTTTTATCCCTACTGAGTTCGATTCCTCAA
TGCTTGTGTAATCATTAAATTGCTCATTGTCACTCAATCCTCCCCTCATG
CTAGTCATTTGTGTGTGTTGTTGGTGTCGTGATCTAAGAGTTGCCGTGAT
TCCTTTTGGTATCCCATCGCCTCTCTATTTTTCTCCCGCAGCATAGCGTT
AATATATACAGTAATACATAAAGCCTCGGCGTTTGTGTTTTAAAACAGGT
TCCATGAATGGATGCCCCCCTCTCGATCCTCTGAGATGTTATTATGTGGC
CGTTAAGATTTTTTTGCGCGGGGGAGGGGGAAAATTTCCATCACTGGCGT
CTGATGTAGTTCACCAAAATACCTCCAAACAACGCGCACGAGGCCCCTTT
ATCCTACTCTCCCTTCGGTGTGTGAACATGCCGAATTCCTACGCGTTTGA
CGTCGTGTAGGAGATCAGCGCGATCAAGCAGCAACTCTCCGATGAGCCGC
TGCAGGGAGGCGGCGAGGTACAGCCGCTGCCGTATGGGCAGCGAGCACGG
GTTACACCCGAACGCTTGGCCTTCGTCATACGCGAACAGTGGAAGACGTT
CAACCAGGTGATTTGTGCTTCGGGCGCGCTGAAGGTTGGCGTGATCTTAC
TTATATTTCCGTTCGATTTGATCCAAGTTGGTCACTGCCAAGTCGCCCCT
CGAGTTTCATAATTGGCTTAGGTCCGTGGTGTCTTATCATCAGCGCCATC
GCCCTTCCTTTATTTGGTGGATTCGGAATCTCCCTTCCCCCGTCGCTTTC
GAGAACAGATCGCAGGGCACGCCGCAGTCGCGCACGAGCAGATCGAGGCT
CTGCGACAGAGCTACAAGCAGCAGTTTAAGGACGATCCCTTCGAAGCCGC
CGAGCGTCAAGAGCGCGCCGCCGAGCGCCGCTTGCTCAAGCAGATGCGGG
ACCAGGCACCGCCCCAAGCAGAAACTGCGCCCGCCCCGACCCCGCCGGCC
GCGGCCGCTTCACAATGCGTCACCTTCGGTACCCCGGCACCAGCATCCTC
AGCGTTAGCGTTTGGGACGACGCCTGCACCTTCGGCGTTCGGTACTTCGG
CGTTCGGCACTTCGGCACCAGCACCCTCAGCATTCGGCACCACTCCAGCA
CCAGCAGCCTTAGCATTTGGCACCACTCCGGCACCATCAGCATTCAGCAC
CACCCCGGTACCAGCACCATCAGCATTCAGAACGTTCGCGGCCACGACTG
CACCAGCCCCCAGCGCTAGTGGACTTTTTGGTACTCCCGCGCCCGCGCCA
AAACCCGCTGGTGGCCTCTTCGGTGCAGCCCCCGCATTCGGGACCCCGAC
TCCGGGTCTCTTCACATCAGCACCTGCTACCCCTGCTAGTGCTTTTTCCG
GAACTCCGGCCCCTGCGCCGACGTCGGGATTCGGGCTTTTTGCGTCGAAG
GCAGCTCCAGCGCCGAGCACGAGTTTCACGTCATCAACAAAAAAGAAGAA
CAAGGGCAACAGTCGCAATCGGAGAGGGGGAGGCTACTGACGTCTTGGTC
GGATAAAGGGAGACCGCGAGAACGGGGCAGATTTTGCTTATGGGGGCTGA
TTAAATAAAACTGCGCGTATTGTGTCGGAAGAGCGCGTGATCGACGACCT
GGAATCGCTTCTAGGACAGGGGCACGAAGATGCAGTGTTCCCACTTTCCT
CGTCAGATGAATCATGAAGAGCTCGTGTAGCGTCGTTATTCATCCAGTGG
TGCCCGGGTGGCTTTGAAAGTGGAAATTGTGGTAGCTGCTGGTGTTCACG
TTGGTTTCATCTACCAAACTCGATTAGAGAGGAAAGCGGGGACCAAACTC
GAGGCAACGTATCTGAAAGCACTCTAGGAACAGCAGAGAGGGCATCCGAT
GAACTTTAGTACAAACCGCCCACGGGCGTTTGGACGTAAAACACAGGTTA
GAAAGGCAAACGAAACATGCTAACATTGAAGAAAAGTTTCAATATGTATA
TATATATATATATATTTCTTGGCGCTGCGAGATAAACAGGAAATAATAGT
ATGCCTTTGGTCCGACTTCTGGGCGGCAGAAGCATTTTTTTACAAAAATG
GCAAAAAAATGTTCATCTGCAAGTAAGAATACGTGACTAGGTGAAGTCGA
AACTGTTGTATTTAGTATTTACTGTATCGCCGATGTCCACTTCGATACTG
TATATACTGTTATCACACCATATTCTTCAGCCTGGGTTGGGAAAATAAAC
AGGCTGACGTGGGACGGGACTGCTGAACGGGGACGGGAAAAATAGTTTTC
CTGTTCGGCTCACCACAAGCAGAAGGCAACCAAATCCGGTTGATCTTACT
CTGCTAAATATGATGACGTCATAACCAACTGTACCGTACTGGATGTGGGA
AAAGCGAGGCACAATAATTGGTCATGACGTTTTATCTGAATAGGCTGGAC
CCGTTACTCAAGCTACATTGAGAACTGCTGGGTCATTGTCGGCGAATTCT
CGGTTGTAAACGCCATCGGTATGCAATTGCGTGACCTGATAAACTCCGGA
TTAGCCCCATGGCAGTTGAGGCTAGACACTGCGAAAAATGATGGTAAACG
ACATCGGTACGCAATTGTGTGACCTGATAAAACTCGGGATTAGCCCGAAG
GCGGTTGACGATAAAGATGGACATGATCCCGAGAGTACGCACCAGATTCA
GCATGGTGTGGGACGAGACTGCCGAACTTGTCTCGTAAGACTAAATTCTC
AGGCGGCGGACGTGGACAAATAAAAATAGAAATATTTGTGCTATCAATTT
CCATAGACC
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Coding sequence (CDS) from alignment at H-elongata_contig20756:561..6669+

>mRNA_H-elongata_contig20756.5964.1 ID=mRNA_H-elongata_contig20756.5964.1|Name=mRNA_H-elongata_contig20756.5964.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3138bp|location=Sequence derived from alignment at H-elongata_contig20756:561..6669+ (Himanthalia elongata Himel1 dioecious)
ATGAGCTTCCTCGGTTTTGCCGCTCCTGCTCCTGCCGCAGGAGGTTTCTT
GTTCGGTAGTACATCTACCCCCGCTCCTGCTCCAGCAGGAACATTCAGAT
GAGCTTCCTCGGTTTTGCCGCTCCTGCTCCTGCCGCAGGAGGTTTCTTGT
TCGGTAGTACATCTACCCCCGCTCCTGCTCCAGCAGGAACATTCAGCTTT
AAAACCGCAAGCACCGCGTCAACCCCGGCCCCTGCCTCTTCCTTCGGGTT
TGGCACGCCTGCCCCCGCCCCGACATCAGGCGTCTTTGGTAGCACGCCCG
CGCCGTCTTCTTCCGCTTTCGGGTTTGGTGCCCCCGCCACCGCACCCGCA
GCGACTGGGGGATTCGGAGCAGCACCCGCGGCGGTAACGCCAGGGCAGGA
GATCACCCCGGAGACTCGATATGATCAGCTTCCGGAGGCGGCGAGGAAGA
GCATTGATGGATTGGCGGTGGAGATCAAGAGCTTTAAAACCGCAAGCACC
GCGTCAACCCCGGCCCCTGCCTCTTCCTTCGGGTTTGGCACGCCTGCCCC
CGCCCCGACATCAGGCGTCTTTGGTAGCACGCCCGCGCCGTCTTCTTCCG
CTTTCGGGTTTGGTGCCCCCGCCACCGCACCCGCAGCGACTGGGGGATTC
GGAGCAGCACCCGCGGCGGTAACGCCAGGGCAGGAGATCACCCCGGAGAC
TCGATATGATCAGCTTCCGGAGGCGGCGAGGAAGAGCATTGATGGATTGG
CGGTGGAGATCAAGAGGCAACGAAGCGTAGCGGATGAAGTCAGCAGGACG
AACCCGACCCACGGTCTTGAGCTGCAGGCGCAGATACGGCAGCTGCGAAG
AGAGCTACTGGACCTCGGAAACGAGCAAGAGGCAACGAAGCGTAGCGGAT
GAAGTCAGCAGGACGAACCCGACCCACGGTCTTGAGCTGCAGGCGCAGAT
ACGGCAGCTGCGAAGAGAGCTACTGGACCTCGGAAACGAGCAAGAGACCC
AGAAGCTCGGTCTCCATAATTTAAAGGATGACGCCGACCGAACCGTAAAG
CAAGCGGAGGTACACGGAACGTTTGTGGTTCAGCGTATGCACAGCCAGTC
GGGCCTCAACACCGTAGAGCAGCTGCCGAGTGCCTACATGCGGGAGATGG
CGGATAGCTTCGAAAAGCGACTTATCGAGTACGCGCAGACCCAGAAGCTC
GGTCTCCATAATTTAAAGGATGACGCCGACCGAACCGTAAAGCAAGCGGA
GGTACACGGAACGTTTGTGGTTCAGCGTATGCACAGCCAGTCGGGCCTCA
ACACCGTAGAGCAGCTGCCGAGTGCCTACATGCGGGAGATGGCGGATAGC
TTCGAAAAGCGACTTATCGAGTACGCGCAGGAGATCAGCGCGATCAAGCA
GCAACTCTCCGATGAGCCGCTGCAGGGAGGCGGCGAGGTACAGCCGCTGC
CGTATGGGCAGCGAGCACGGGTTACACCCGAACGCTTGGCCTTCGTCATA
CGCGAACAGTGGAAGACGTTCAACCAGGAGATCAGCGCGATCAAGCAGCA
ACTCTCCGATGAGCCGCTGCAGGGAGGCGGCGAGGTACAGCCGCTGCCGT
ATGGGCAGCGAGCACGGGTTACACCCGAACGCTTGGCCTTCGTCATACGC
GAACAGTGGAAGACGTTCAACCAGATCGCAGGGCACGCCGCAGTCGCGCA
CGAGCAGATCGAGGCTCTGCGACAGAGCTACAAGCAGCAGTTTAAGGACG
ATCCCTTCGAAGCCGCCGAGCGTCAAGAGCGCGCCGCCGAGCGCCGCTTG
CTCAAGCAGATGCGGGACCAGGCACCGCCCCAAGCAGAAACTGCGCCCGC
CCCGACCCCGCCGGCCGCGGCCGCTTCACAATGCGTCACCTTCGGTACCC
CGGCACCAGCATCCTCAGCGTTAGCGTTTGGGACGACGCCTGCACCTTCG
GCGTTCGGTACTTCGGCGTTCGGCACTTCGGCACCAGCACCCTCAGCATT
CGGCACCACTCCAGCACCAGCAGCCTTAGCATTTGGCACCACTCCGGCAC
CATCAGCATTCAGCACCACCCCGGTACCAGCACCATCAGCATTCAGAACG
TTCGCGGCCACGACTGCACCAGCCCCCAGCGCTAGTGGACTTTTTGGTAC
TCCCGCGCCCGCGCCAAAACCCGCTGGTGGCCTCTTCGGTGCAGCCCCCG
CATTCGGGACCCCGACTCCGGGTCTCTTCACATCAGCACCTGCTACCCCT
GCTAGTGCTTTTTCCGGAACTCCGGCCCCTGCGCCGACGTCGGGATTCGG
GCTTTTTGCGTCGAAGGCAGCTCCAGCGCCGAGCACGAGTTTCACGTCAT
CAACAAAAAAGAAGAACAAGGGCAACAGTCGCAATCGGAGAGGGGGAGGC
TACTGAATCGCAGGGCACGCCGCAGTCGCGCACGAGCAGATCGAGGCTCT
GCGACAGAGCTACAAGCAGCAGTTTAAGGACGATCCCTTCGAAGCCGCCG
AGCGTCAAGAGCGCGCCGCCGAGCGCCGCTTGCTCAAGCAGATGCGGGAC
CAGGCACCGCCCCAAGCAGAAACTGCGCCCGCCCCGACCCCGCCGGCCGC
GGCCGCTTCACAATGCGTCACCTTCGGTACCCCGGCACCAGCATCCTCAG
CGTTAGCGTTTGGGACGACGCCTGCACCTTCGGCGTTCGGTACTTCGGCG
TTCGGCACTTCGGCACCAGCACCCTCAGCATTCGGCACCACTCCAGCACC
AGCAGCCTTAGCATTTGGCACCACTCCGGCACCATCAGCATTCAGCACCA
CCCCGGTACCAGCACCATCAGCATTCAGAACGTTCGCGGCCACGACTGCA
CCAGCCCCCAGCGCTAGTGGACTTTTTGGTACTCCCGCGCCCGCGCCAAA
ACCCGCTGGTGGCCTCTTCGGTGCAGCCCCCGCATTCGGGACCCCGACTC
CGGGTCTCTTCACATCAGCACCTGCTACCCCTGCTAGTGCTTTTTCCGGA
ACTCCGGCCCCTGCGCCGACGTCGGGATTCGGGCTTTTTGCGTCGAAGGC
AGCTCCAGCGCCGAGCACGAGTTTCACGTCATCAACAAAAAAGAAGAACA
AGGGCAACAGTCGCAATCGGAGAGGGGGAGGCTACTGA
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