mRNA_H-elongata_contig20699.5927.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20699.5927.1
Unique NamemRNA_H-elongata_contig20699.5927.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: D7FJB2_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB2_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 6.590e-85
Identity = 162/280 (57.86%), Postives = 187/280 (66.79%), Query Frame = 1 
Query:    1 FKGEVTDSMQKMAAAKRLTPEEITLAKSKAEDVVNEVLAKGDIIPPPNVEAVLPGSCNIMVEGFPLVQPKRQRCCKAKDLQGGGLPGQPPPLPPPEAWGSDAELGRGEELKLPGVLRT-QTVGGIKEQEVVCFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATPFYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELEIKELLANGGAKVVYDCAVQLFPS 837
            F+GE+   ++K AA++ L   EI  A+  A D V E L K   +PP +++ +L  SC++ VEG PL   K Q CCKA                P    G +A  G G E  LPGVLRT Q      E EV C PSFIIAGTQKSGTTALTGILEKHP V M+ RKELHFFD K P+     SYA NFP FNASQA EHRAPFVVGEATPFY ASR AC +MRKLVPDVRL++LVRDPVKRAYSE+QMK RRVEE+ E+ ELL     K+ YDCAV+LFPS
Sbjct:   90 FEGELDVVLKKSAASRGLNDSEIEEARVAATDAVREALRKPGDLPPRSIDGILSASCDLQVEGLPLYHDKGQTCCKAAQKPPAQQQAHSKDNGPQGRRGLEAAEGEGGE-PLPGVLRTTQRAEAAGENEVACLPSFIIAGTQKSGTTALTGILEKHPLVMMAERKELHFFDHKTPNQINAASYAFNFPSFNASQAMEHRAPFVVGEATPFYLASRKACMNMRKLVPDVRLLVLVRDPVKRAYSEHQMKVRRVEEQGEMLELLPLHANKI-YDCAVKLFPS 367
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A6H5L6E8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E8_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 2.180e-83
Identity = 164/283 (57.95%), Postives = 188/283 (66.43%), Query Frame = 1 
Query:    1 FKGEVTDSMQKMAAAKRLTPEEITLAKSKAEDVVNEVLAKGDIIPPPNVEAVLPGSCNIMVEGFPLVQPKRQRCCKAKDLQGGGLPGQPPPLPPPEAWGSDAELGRGEELKLPGVLRT----QTVGGIKEQEVVCFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATPFYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELEIKELLANGGAKVVYDCAVQLFPS 837
            F  E+   +++ AA+  L   EI  A+  A D V E L K   +PP +V+ VL  SCN+ V+G PL   K Q CCKA   +            P    G +AE G G E  LPGVLRT    +  GG    EV C PSFIIAGTQKSGTTALTGILEKHP V M+ RKELHFFD K P+     SYA NFP FNASQAAEHRAPFVVGEATPFY ASR AC +MRKLVPDVRL++LVRDPVKRAYSE+QMK RRVEE+ E+ ELL     K+ YDCAV+LFPS
Sbjct:   46 FDCELDVVLKRSAASSGLNDSEIEEARVAARDAVREALRKPGGLPPRSVDGVLSASCNLQVKGLPLYHDKGQTCCKAAHKRPAQQQAHSKDNGPQGRRGLEAEEGEGVE-PLPGVLRTTQRAEAAGG---DEVACLPSFIIAGTQKSGTTALTGILEKHPQVMMAERKELHFFDHKNPNQLNAASYAFNFPSFNASQAAEHRAPFVVGEATPFYLASRKACMNMRKLVPDVRLLVLVRDPVKRAYSEHQMKVRRVEEQGEMLELLPLHANKI-YDCAVKLFPS 323
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A7S3Y7U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7U4_HETAK)

HSP 1 Score: 117 bits (292), Expect = 8.060e-29
Identity = 65/146 (44.52%), Postives = 95/146 (65.07%), Query Frame = 1 
Query:  391 CFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNAS-QAAEHRAPFVVGEATPFYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELEIKELLANGGAKVVYDCAVQ 825
            C P  ++AGTQKSG+TALTG L +HP V M+  KELHFFD K    ++ +  AH    F  S +  E+R   + GEATP+Y  S+ AC+++    P  +LI+L+R+P+ RAYSE+QMKKRRV+++    + + N  A+ +Y C V+
Sbjct:    8 CLPGLVVAGTQKSGSTALTGYLLQHPNVQMAKMKELHFFDDKR---NMDKGLAHYLEMFQESVEGGENRT--LNGEATPYYLHSKEACKNIAMNAPHAKLIVLLRNPIDRAYSEWQMKKRRVDDQSAFFDQM-NEDAERLYRCLVE 147
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A7S1C3G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3G5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.230e-22
Identity = 56/135 (41.48%), Postives = 76/135 (56.30%), Query Frame = 1 
Query:  391 CFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATPFYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELEIKELLANGG 795
            C PSF++ G QKSG+TA+      HP V    +KELHFFD      S +  Y  +F   +  ++ E    FV GE TP Y   R     +R+ +PD RLI++VR PV+RAYSEYQMK RR++  +    L  + G
Sbjct:  378 CLPSFVVIGAQKSGSTAIFSYFLHHPAVNAPRKKELHFFDFSRRMASGITGYLQDFMDVDVGRSQE--TEFVTGETTPAYILGRTTPLMLRRALPDARLILVVRHPVERAYSEYQMKLRRIDAAMNTSRLFDDWG 510
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A7S2SV20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV20_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.080e-20
Identity = 66/157 (42.04%), Postives = 83/157 (52.87%), Query Frame = 1 
Query:  391 CFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMP----------------------SLSVVQSYAHNFPRFNASQAAEHRA------------PFVVGEATPFYFASRNACRHMRKLVPDV-RLIILVRDPVKRAYSEYQMKKRRVE 756
            C P+FIIAGTQKSG+TAL   L  HP V M   KELHFFD   P                        S +Q+YA +      ++A E+R             PF+ GEATP Y +  + C  M + +P+V  LI+L+RDPV R+YSEYQMK RRVE
Sbjct:  181 CLPTFIIAGTQKSGSTALATYLLAHPQVSMGYSKELHFFDKPRPLGLLPYMTLFAAADGQDAVGVVDQSALQAYAAD------AKAREYRRWLLPGLPSRAAPPFISGEATPNYISYADTCAAMVESMPEVPELIVLLRDPVDRSYSEYQMKARRVE 331
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: F0YB69_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB69_AURAN)

HSP 1 Score: 101 bits (252), Expect = 1.260e-20
Identity = 58/123 (47.15%), Postives = 70/123 (56.91%), Query Frame = 1 
Query:  391 CFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATPFYFASRNACRHMR-KLVPDVRLIILVRDPVKRAYSEYQMKKRRVE 756
            CFPS ++ G QKSG+TAL G L  HP V  S  KELH+FD           Y   +P          RA  +  EATPFY A  ++C  +R +L P   L+ LVR+PV RAYSEYQMK RRVE
Sbjct:  153 CFPSVVVIGAQKSGSTALAGHLMHHPSVDFSRVKELHYFDKNESQCLGALPYLLQYPPM--------RAAAITAEATPFYVADLHSCGRIRSQLGPRTTLVTLVREPVARAYSEYQMKHRRVE 267
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: F0XZZ2_AURAN (Sulfotransfer_1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZZ2_AURAN)

HSP 1 Score: 100 bits (250), Expect = 3.080e-20
Identity = 56/127 (44.09%), Postives = 71/127 (55.91%), Query Frame = 1 
Query:  391 CFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAP----FVVGEATPFYFASRNACRHMRKLVPD-VRLIILVRDPVKRAYSEYQMKKRRVE 756
            C P  +I G QK G+TAL  IL  HP V  +  KELH+FD           Y       NA+ A     P    F+  EATPFY AS  ACR+    +PD  +LI++VR+PV R YSE+QM++RRVE
Sbjct:  553 CLPKVVIGGVQKGGSTALAAILSAHPNVQFAPHKELHYFDGGPAFCRGTAKYLSQMKPMNAAVAPHAPGPSVGEFISAEATPFYVASPVACRNFAAEMPDDAKLIVIVREPVSRLYSEFQMERRRVE 679
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A2V9ML20_9BACT (Sulfotransferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9ML20_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 7.440e-20
Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 1 
Query:  397 PSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATPFYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELEIKELLANGGAKVV 807
            P FII G Q+ GTT L G L KHP +  +++KE+HFFD        V  Y  +FP +N  + +     FV GEA+P+Y    +  + + KLVP+V+LI+L+R+PV RAYS Y  + RR  E L  ++ +     +VV
Sbjct:    2 PDFIIIGAQRCGTTYLYGELTKHPRIAPALKKEVHFFDLHYER--GVAWYRAHFPAWNGKRISAR--DFVTGEASPYYLFHPHVPKRVAKLVPNVKLIVLLRNPVDRAYSHYHHEVRRGFESLSFQDAIDREQERVV 134
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A8J2WT39_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WT39_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.410e-19
Identity = 57/123 (46.34%), Postives = 69/123 (56.10%), Query Frame = 1 
Query:  391 CFPSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATPFYFASRNACRHMR-KLVPDVRLIILVRDPVKRAYSEYQMKKRRVE 756
            CFPS +I G QKSG+TAL   L +HP +  S  KELHFFD           Y   FP  +  +A          EATPFY AS  AC HM  +L      +++VR+PV RAYSEYQMK RRV+
Sbjct:  162 CFPSLVIVGAQKSGSTALAVHLTRHPNIAFSRDKELHFFDKNESLCPGPLGYLLKFPARDELKA--------TAEATPFYIASTEACTHMAAQLGRRATYVLIVREPVARAYSEYQMKHRRVQ 276
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BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Match: A0A7W1M0K9_9ACTN (Sulfotransferase domain-containing protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W1M0K9_9ACTN)

HSP 1 Score: 95.5 bits (236), Expect = 2.730e-19
Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 1 
Query:  397 PSFIIAGTQKSGTTALTGILEKHPWVGMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQ--AAEHRAPFVVGEATPFYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELE 768
            P F+IAG  K+GTT+L G L +HP++  + +KE+H+FD           Y  +FP  +  +  A EH  PF+ GEA+P Y +       + +L PDV+L+I +R+P+ RAYS++QM  R  EE L+
Sbjct:   54 PDFVIAGAAKAGTTSLFGWLSEHPFIEPASKKEVHYFDYN--HFRGEDWYRKHFPLSSERERFAREHGRPFITGEASPSYLSHHWVPERLARLKPDVKLLIALRNPIDRAYSQFQMSHREHEEPLD 177
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20699.5927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJB2_ECTSI6.590e-8557.86Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6H5L6E8_9PHAE2.180e-8357.95Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A7S3Y7U4_HETAK8.060e-2944.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1C3G5_9STRA2.230e-2241.48Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2SV20_9STRA1.080e-2042.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YB69_AURAN1.260e-2047.15Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0XZZ2_AURAN3.080e-2044.09Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A2V9ML20_9BACT7.440e-2040.15Sulfotransferase n=1 Tax=Acidobacteria bacterium T... [more]
A0A8J2WT39_9STRA1.410e-1946.34Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7W1M0K9_9ACTN2.730e-1939.68Sulfotransferase domain-containing protein n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20699contigH-elongata_contig20699:880..4640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.9
Seed ortholog evalue8e-74
Seed eggNOG ortholog2880.D7FJB2
KEGG koko:K07808
KEGG Pathwayko00534,map00534
GOsGO:0001878,GO:0003674,GO:0003824,GO:0006464,GO:0006477,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0008146,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009987,GO:0016740,GO:0016782,GO:0019538,GO:0036211,GO:0042742,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0051704,GO:0051707,GO:0051923,GO:0071704,GO:0098542,GO:1901564
EggNOG free text desc.heparan sulfate sulfotransferase activity
EggNOG OGsKOG3704@1,KOG3704@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-12_008190.1
EC2.8.2.29
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons5
Model size837
Cds size813
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20699.5927.1prot_H-elongata_contig20699.5927.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20699 880..4616 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930156.8135114-CDS-H-elongata_contig20699:879..9751622930156.8135114-CDS-H-elongata_contig20699:879..975Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 880..975 -
1691679302.8747563-CDS-H-elongata_contig20699:879..9751691679302.8747563-CDS-H-elongata_contig20699:879..975Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 880..975 -
1622930156.8318589-CDS-H-elongata_contig20699:1706..17781622930156.8318589-CDS-H-elongata_contig20699:1706..1778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 1707..1778 -
1691679302.8852415-CDS-H-elongata_contig20699:1706..17781691679302.8852415-CDS-H-elongata_contig20699:1706..1778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 1707..1778 -
1622930156.8509414-CDS-H-elongata_contig20699:2185..22911622930156.8509414-CDS-H-elongata_contig20699:2185..2291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 2186..2291 -
1691679302.893513-CDS-H-elongata_contig20699:2185..22911691679302.893513-CDS-H-elongata_contig20699:2185..2291Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 2186..2291 -
1622930156.8665214-CDS-H-elongata_contig20699:3262..33771622930156.8665214-CDS-H-elongata_contig20699:3262..3377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 3263..3377 -
1691679302.9015129-CDS-H-elongata_contig20699:3262..33771691679302.9015129-CDS-H-elongata_contig20699:3262..3377Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 3263..3377 -
1622930156.8833597-CDS-H-elongata_contig20699:4192..46161622930156.8833597-CDS-H-elongata_contig20699:4192..4616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 4193..4616 -
1691679302.91255-CDS-H-elongata_contig20699:4192..46161691679302.91255-CDS-H-elongata_contig20699:4192..4616Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20699 4193..4616 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930156.9073453-UTR-H-elongata_contig20699:4616..46401622930156.9073453-UTR-H-elongata_contig20699:4616..4640Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20699 4617..4640 -
1691679302.9226267-UTR-H-elongata_contig20699:4616..46401691679302.9226267-UTR-H-elongata_contig20699:4616..4640Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20699 4617..4640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20699.5927.1

>prot_H-elongata_contig20699.5927.1 ID=prot_H-elongata_contig20699.5927.1|Name=mRNA_H-elongata_contig20699.5927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MQKMAAAKRLTPEEITLAKSKAEDVVNEVLAKGDIIPPPNVEAVLPGSCN
IMVEGFPLVQPKRQRCCKAKDLQGGGLPGQPPPLPPPEAWGSDAELGRGE
ELKLPGVLRTQTVGGIKEQEVVCFPSFIIAGTQKSGTTALTGILEKHPWV
GMSMRKELHFFDTKMPSLSVVQSYAHNFPRFNASQAAEHRAPFVVGEATP
FYFASRNACRHMRKLVPDVRLIILVRDPVKRAYSEYQMKKRRVEEELEIK
ELLANGGAKVVYDCAVQLFPS
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mRNA from alignment at H-elongata_contig20699:880..4640-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20699.5927.1 ID=mRNA_H-elongata_contig20699.5927.1|Name=mRNA_H-elongata_contig20699.5927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3761bp|location=Sequence derived from alignment at H-elongata_contig20699:880..4640- (Himanthalia elongata Himel1 dioecious)
TTCAAGGGCGAGGTGACAGACAGTATGCAAAAGATGGCGGCGGCGAAAAG
ATTGACGCCGGAGGAGATCACGCTTGCCAAGTCAAAGGCCGAGGACGTGG
TGAACGAGGTCTTGGCTAAGGGCGATATCATCCCGCCGCCGAACGTTGAG
GCCGTGCTCCCCGGATCCTGCAATATTATGGTTGAGGGGTTTCCGCTGGT
GCAGCCCAAGCGGCAAAGATGCTGCAAGGCGAAAGATCTTCAGGGGGGTG
GATTGCCCGGTCAGCCGCCACCGCTACCACCTCCGGAGGCCTGGGGATCG
GATGCGGAATTGGGCAGAGGCGAAGAGCTGAAGTTACCGGGGGTGCTGAG
GACGCAGACGGTCGGGGGGATCAAGGAGCAGGAGGTGGTCTGCTTCCCAA
GTTTCATAATCGCGGGCACTCAAAAAAGTGGCACCACCGCACTCACGGGT
GAAAACATAAAACATTTTGAATATAGACTACTGCTGCATTTTGCCGCCGT
GGAGTCAAAACACAACATTACAAACAGAGAAGAGTAGGATCGTCGCTACC
TACCGTCTGTCTGATGTTTGATGGCGATATCTTGGCCTACGTTTATTGTC
GTGGAGCGTCTTGCGGGGAAAAGGACGGAAGGAAAGGAAATGGTTAAGAT
CTGGTCAAGAGGGGTCGTGCTCGGACGCCGATCACCGTTTCTCTATCGCA
TCGAGACAGCGTGAGGTTATGACCCCCCCCACTTCCCTATGAAGCCACTG
CACCCCATAGTGTACTGCCGTAGTACTCCCCTATTATAGTACCGTGGGCC
TCGAAATGGTAATCAATTGTCGGTGAGATTTCTCGCCGTGCTGTATCAGG
CCTACTCCGATAGGTTGTGGTTTGGTTTGTCTCCGCGTGTAGGAGTACGT
GACTGTGCAGCGAAGGGAACGATAGCTGACGTCGCGTTTGGCGTTGCTTG
CGCACAAGCATATTTTGTATAATGTATAATTTACGGGGGCGGGGACGTGC
TTGGTGCTCCCCCACAACATGTTCCGCTCCCCCCCCCCCCCCCCGACTCT
TAGTCGTGTTGCCGTGTTATTTTACGGCAATGCCGAAAAATTAAAATATC
TGGTGACGTTAGCAAGGGCAAGAATTTACCGTTTGTTTACCCCCTGGAGC
ACCTTTGGGACACCGGCCTCGCGAACGCCTTTCATCGCTTTTTATCGCCT
TTTTGTTTTCGTTTCGACCCTTGCTGCTGGTGCACGTGTTCCGGTCCGTG
GTTCGGGGGACAGGCATCTTGGAGAAGCATCCTTGGGTAGGGATGTCGAT
GCGGAAGGAGCTTCATTTCTTCGACACCAAAATGCCCTCCCTTTCGGTGG
TGCAGTCGTATGCCCATAACTTCCCAAGGTGTGTGATATGTTTTCGAAGG
CGCGCAAAAATGATGATGGGTGACAATGTTTGCAAGGCGAGCAGCTCTTG
TCCGAGGTGTGCAACTCTTTTCCGAGGTATGGTGTGGTATACGGTATACG
GTGCAGTGTCTAGGTGTTTGACTGCGTCGCTGGGTCGTACGACGAAGTAG
ATCACGGTAGCAGATCATTCTTGTGCGGCTGATGAATCACACTTTGATTC
ACGCTTTCCGCGTATTGTACTTGCAACCCAAGAGTTAAGGTGGTATAACT
CGCCGTGAAGCCATCAAATGCCAATCCTGCTTGCAATTTCCTCGTGGCTT
GGGCGCTGTCGTTGTCGCTGTCTCAAGAATGGACAATTTTACACCGCCTA
TCGTGCCGCCTATTAATAGATATACTTCGTATGCCATTTAATATCAAGTC
ATGCCGTTCACAGTCAGAGTTCGCAGTTGTTCCGACCAAATCTCGTCGGC
GCATATTGCGTATCGTGTCTGTCGCGTTTGCCGTGTACCGGCGCGGTTTC
AGCTGAGGATCGTGTCAGGGTCGTGTTTTTTTCGAAGTCATTCTTGCTCT
TTGTTACGTCCTCCTCCAAGGATCGTGTCAGCGTCTCGGGGGAGGGAAGG
GAAGGGGACCATGCGCAGGAGCGGCCAACTCACCACACGCAAATCATAAC
ACAACTTGTACCACACTTCGCGCGGCCGCGGATGAAACTATACACGATAC
ACCGCTCACTCACAATAAACACTCCAATTCAGTACAGTACTCTGCAGTGC
AATGGGTCCCCACCCCTTTTGGCCATTAAACCCAAGTTGACTATTTAGCA
TTGCAATACAGGGCCATACCATATATTGTTGATGCCCTTCCTGACCACTT
TTCCGCGCTATCAGCGAAGTGAATCTCCCGCCCCATTGATTTATGATCTT
CCCGGCGCTTGCTGCATTACATTTTACACGGTTTTATTTAATGCTGTAGA
TTTAATGCCTCCCAAGCGGCGGAACACCGAGCTCCGTTTGTGGTGGGAGA
GGCCACCCCGTTCTACTTCGCCAGCCGAAATGCCTGCCGGCACATGCGAA
AACTTGTGAGAGGACTTGTTTGTCAAAGCGAGCCAAGCTGCCAATAAATC
CCCAGTGAAGGAGAAATGTGGAAGCGTTGTCGCACAACCGATCATTTTAG
TCGAAAAATATGTGGACGTTTTTTCGCTCTCGTTTTCCGTCTTGGGCTAG
GAGTAGAGGGCTAGGATTAGATAGTCATCAGGATAATGAGGGCCCTGGTT
AAAGAATTGGAGGAACGCACGAGGTCGCGACCTTCTTGTTTAGAGTGATG
GTGGCACTAACGCTCACGCTGGTGATGCGATCCCTGGACTGGAGGATATG
CCTTGCTCTGGATGCCCCTGGATTGGTAATTCAGACTGCCCGCGGTGTCC
GTCATTGTACGCCATCGTTCGTAATCGAATGCGTGTTTGCGACAACCATG
CTCCCCGTCCAGGTTCCAGACGTGCGACTGATAATTCTGGTCAGGGACCC
GGTTAAGAGGGCTTACAGCGAGTACCAGATGAAGGTGCGCTTTAAGTTAC
TGGGGATGTTACGATATGACGGACTCAATGAAGCGAGAGGATGGGATGGG
ATGAGATGGGATGGTACCGTGATAATGGTGCTCGAGCTCTTTAGGGAGTT
TGTTGATATCTGAATGTTCCGTCATCTCGCTGGTTATTTGGTTTTGATTA
TTCGGTATTGATATTCGATATGTGCGGTGCGGTGTAAGCTTCCAGCCCAA
ATGTTGAGCAACTACTGGTGCATCGTCCTCGTGAATGTTTAACGAAGCTA
GGGACTATCCAGTATCAAGGGGGCGCCGACTCTGTCTTCGACTGAGCGGA
CATGATTTGTTGATCTCTGTGCCTTTGATTACGCGGACCTGGTTAGATAC
AGCACAGTCAATCAGATCATCTGGAGCAGCACAGTCAGTAGTCAGTCAGT
ACCTTCTACACACCCGAGCAGTGGAAAAGAGGGCGAACTGGCGTTTACGA
AGCCCTCAATCTCGTTCATCGTCTTTCACAAGTGGGGGTTACTGAAAGGT
TCGACCCAGATCTGTTCGGATCGACTGGAAGAAAGAAAACGACCCAGATC
GTGGGCGGGCGACTCGTCAACCCGAAACCAAGCTAGCTGCAAGCGTAATC
GGTGTTGCCTTTTGCGTATTATGTCCTGTATCACGTATTGCGTATTATGT
ATTAATGACCGTTAACGTATTAATGACCGGAATGTTAACGACGAAGCTGA
CCGGAATGTTAACAGAAGCGACGAGTGGAGGAGGAACTAGAAATAAAGGA
GCTTCTGGCTAATGGGGGCGCGAAAGTGGTCTACGACTGCGCAGTACAGC
TGTTTCCATCG
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Coding sequence (CDS) from alignment at H-elongata_contig20699:880..4640-

>mRNA_H-elongata_contig20699.5927.1 ID=mRNA_H-elongata_contig20699.5927.1|Name=mRNA_H-elongata_contig20699.5927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1626bp|location=Sequence derived from alignment at H-elongata_contig20699:880..4640- (Himanthalia elongata Himel1 dioecious)
ATGCAAAAGATGGCGGCGGCGAAAAGATTGACGCCGGAGGAGATCACGCT
TGCCAAGTCAAAGGCCGAGGACGTGGTGAACGAGGTCTTGGCTAAGGGCG
ATATCATCCCGCCGCCGAACGTTGAGGCCGTGCTCCCCGGATCCTGCAAT
ATTATGGTTGAGGGGTTTCCGCTGGTGCAGCCCAAGCGGCAAAGATGCTG
CAAGGCGAAAGATCTTCAGGGGGGTGGATTGCCCGGTCAGCCGCCACCGC
TACCACCTCCGGAGGCCTGGGGATCGGATGCGGAATTGGGCAGAGGCGAA
GAGCTGAAGTTACCGGGGGTGCTGAGGACGCAGACGGTCGGGGGGATCAA
GGAGCAGGAGGTGGTCTGCTTCCCAAGTTTCATAATCGCGGGCACTCAAA
AAAGTGGCACCACCGCACTCACGGATGCAAAAGATGGCGGCGGCGAAAAG
ATTGACGCCGGAGGAGATCACGCTTGCCAAGTCAAAGGCCGAGGACGTGG
TGAACGAGGTCTTGGCTAAGGGCGATATCATCCCGCCGCCGAACGTTGAG
GCCGTGCTCCCCGGATCCTGCAATATTATGGTTGAGGGGTTTCCGCTGGT
GCAGCCCAAGCGGCAAAGATGCTGCAAGGCGAAAGATCTTCAGGGGGGTG
GATTGCCCGGTCAGCCGCCACCGCTACCACCTCCGGAGGCCTGGGGATCG
GATGCGGAATTGGGCAGAGGCGAAGAGCTGAAGTTACCGGGGGTGCTGAG
GACGCAGACGGTCGGGGGGATCAAGGAGCAGGAGGTGGTCTGCTTCCCAA
GTTTCATAATCGCGGGCACTCAAAAAAGTGGCACCACCGCACTCACGGGC
ATCTTGGAGAAGCATCCTTGGGTAGGGATGTCGATGCGGAAGGAGCTTCA
TTTCTTCGACACCAAAATGCCCTCCCTTTCGGTGGTGCAGTCGTATGCCC
ATAACTTCCCAAGGCATCTTGGAGAAGCATCCTTGGGTAGGGATGTCGAT
GCGGAAGGAGCTTCATTTCTTCGACACCAAAATGCCCTCCCTTTCGGTGG
TGCAGTCGTATGCCCATAACTTCCCAAGATTTAATGCCTCCCAAGCGGCG
GAACACCGAGCTCCGTTTGTGGTGGGAGAGGCCACCCCGTTCTACTTCGC
CAGCCGAAATGCCTGCCGGCACATGCGAAAACTTATTTAATGCCTCCCAA
GCGGCGGAACACCGAGCTCCGTTTGTGGTGGGAGAGGCCACCCCGTTCTA
CTTCGCCAGCCGAAATGCCTGCCGGCACATGCGAAAACTTGTTCCAGACG
TGCGACTGATAATTCTGGTCAGGGACCCGGTTAAGAGGGCTTACAGCGAG
TACCAGATGAAGGTTCCAGACGTGCGACTGATAATTCTGGTCAGGGACCC
GGTTAAGAGGGCTTACAGCGAGTACCAGATGAAGAAGCGACGAGTGGAGG
AGGAACTAGAAATAAAGGAGCTTCTGGCTAATGGGGGCGCGAAAGTGGTC
TACGACTGCGCAGTACAGCTGTTTCCATCGAAGCGACGAGTGGAGGAGGA
ACTAGAAATAAAGGAGCTTCTGGCTAATGGGGGCGCGAAAGTGGTCTACG
ACTGCGCAGTACAGCTGTTTCCATCG
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