mRNA_H-elongata_contig20693.5926.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20693.5926.1
Unique NamemRNA_H-elongata_contig20693.5926.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20693.5926.1 vs. uniprot
Match: D7FQS3_ECTSI (F-box, zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQS3_ECTSI)

HSP 1 Score: 526 bits (1354), Expect = 6.000e-173
Identity = 330/709 (46.54%), Postives = 416/709 (58.67%), Query Frame = 3 
Query:  144 EADGRYSVLVSGLEEALDACPAIPSDTLAASLDECLRRPS-AATTWSVRATPVLVRGVLSLVTRSPRSLCRAVVPVLVRFAAESECGMNGDTKEIPEKSS------RGTRCYSCSTVGWFRT--TDEPDVSREPRPLRCSKQDIRDIVLQGVLKWVAKAYFREHSALLQTSLHRAVCDGVRHVLDANAMAAGRVSTPHFPLACRLLLSLVGGVAPDGGCEVALFLQELCAAELRCVLARPEVCTPPRTARGARRHEP-----EGDEQALVALPLLEGYAGHLCLYRHVRDEKMSSHLVWLLQQTLMVFRKLADLDPPDGANGRT-----QWSRGTAALLRSLCGVLALLLTRPQRGDRNVAPVPAIAGSLLEIIFDSDACPLASLPSPLAGAAVVALRRAGFLQLARTEALLGFSIIWPSIISQKEARETASAGQSSPSMKGVTK-------GVEFRAADFAFQRSWSMVASEVDQYLPRLLELKEEEDNDDEGASADDGGYDSN-------------DGECDWGRFETGSSAVDRWTRVPDEVTLRVFSFMTPKRLSRLACVSRAWRELLGVISIWRPFFEARWPLRTLTNEADLAGVSKMLLEAVDRPVLAEGERKYKRRRRC----VVQWEIPADDDGRVAQT--QDWMVLYRDQHRAELAARGRFASKTMFPWMVCPFLECVCSLKSEFAVKRHMKTHKPHRKVR 2135
            + +G +  LVSGL+ ALDACPA+P+ TL  S+++CLRRPS  A  W+  +T + V GVLSLV+ SPRSLC+AVV VLVRF A   C    D+  +  +        R +RC SCST        TD  +  R  RP  C+ Q+ RD+VL+ +L+W    +FR+ S LLQ S++RAVC GVR  L A  ++  + S P FPL CRLLLS VGG+A DGG ++A FL+E C AE+R  L R     P  TARG R  +       G  +    LP+L+ Y GHLCL RHV D   ++HLVWL +Q L V R L D+ P +GA G T     + +    A+L SL   LALLLTRP+RG    + VP   G+LLEI+FDSD  PL+ +P PLA AA+  L+ AG LQLAR++ LL   + W S   +  A       +  P    VT+       G++F+ A  AF+ SWS+ A+ VD  LP          N    +   DGG DS              DG+ D  R   G+     W RVPDEVTLRVFSFMTPKR+ RLACV RAWRELL V  +WRPFFEARWPL  + ++ DL GVS  LL       L    +  KRRRR     VV W    D  G+      +DWM LYRD+HRAE AARGRFA+KT FPW+VCPFL CV SLKSEFAVKRH++THK  R+ R
Sbjct:   10 QTNGPFLALVSGLQGALDACPAMPTLTLETSIEDCLRRPSPGAAVWAFGSTRMFVSGVLSLVSSSPRSLCQAVVSVLVRFVAGDGCDTLDDSLALDAEGEETQDRRRRSRCLSCSTALSDNAAGTDASETERA-RPQCCNAQEKRDLVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVAAELSRRQASPPSFPLGCRLLLSFVGGLAGDGGAQIAGFLRERCGAEMRRFLTRGRWRPPSGTARGRRHADAWTATGRGVARRQPELPMLDAYVGHLCLCRHVSDPLSATHLVWLARQALAVLRML-DM-PEEGAPGTTAAPERRQNSNFEAVLASLSHALALLLTRPKRGGVCSSIVPETVGNLLEIVFDSDPRPLSCVPRPLAEAAIDVLKEAGHLQLARSDELL--RLPWGSRRGEPNAAGRREESKLGPVAATVTEEGASFASGIDFQRASLAFRNSWSLAAAGVDMQLPST--------NHSGRSRRGDGGGDSXXXXXXXXXXXXSADGDVDGARAIAGNG----WGRVPDEVTLRVFSFMTPKRVCRLACVDRAWRELLTVSGVWRPFFEARWPLTAIGSDLDLVGVSDRLLAEG----LGSARKNAKRRRRHGKIGVVHWRTSEDTSGQQQPLLERDWMALYRDRHRAERAARGRFAAKTEFPWLVCPFLGCVSSLKSEFAVKRHVRTHKRPREKR 697
[Close]
BLAST of mRNA_H-elongata_contig20693.5926.1 vs. uniprot
Match: A0A6H5JX00_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX00_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 4.080e-105
Identity = 238/550 (43.27%), Postives = 304/550 (55.27%), Query Frame = 3 
Query:  420 EIPEKSSRGTRCYSCSTVGWFRTTDEP---DVSREP--RPLRCSKQDIRDIVLQGVLKWVAKAYFREHSALLQTSLHRAVCDGVRHVLDANAMAAGRVSTPHFPLACRLLLSLVGGVAPDGGCEVALFLQELCAAELRCVLARPEVCTPPRTARGARRHEPEGDEQALVA-----LPLLEGYAGHLCLYRHVRDEKMSSHLVWLLQQTLMVFRKLADLDPPDGANGRT-----QWSRGTAALLRSLCGVLALLLTRPQRGDRNVAPVPAIAGSLLEIIFDSDACPLASLPSPLAGAAVVALRRAGFLQLARTEALLGFSIIWPSIISQKEARETASAGQSSPSMKG-----VTK-------GVEFRAADFAFQRSWSMVASEVDQYLPRLLELKEEEDNDDEGASADDGGYDSN-------------DGECDWGRFETGSSAVDRWTRVPDEVTLRVFSFMTPKRLSRLACVSRAWRELLGVISIWRPFFEARWPLRTLTNEADLAGVSKMLLEAVDRPVLAEGERKYKRRRRC----VVQWEIPADDDG 1937
            E  + + R +RC SCS       +D P   D S     RP  CS Q+ RD+VL+ +L+W    +FR+ S LLQ S++RAVC GVR  L A  ++  + S P FP  CRLLLS VGG+A DGG ++A FL+E C AELR  LAR     P  T RG R  +        VA      P+L+ Y GHLCL RHV D   ++HL WL +Q L V R L D+ P +GA+  T     + S   A +L SL   LALLLTRP+RG    + VP  AG+LLEI+FDSDA PL+ +P PLA AA+  L+ AG +QLAR++ LL      P   S++   E  +AG+ + S  G     VT+       G++FR A  AF+ +WS+ A+ VD  LP               +   DGG DS+             DG+ D      G+ A + W RVPDEVT+RV SFMTPKR+ RLACV RAWRELL V  +WRPFFEARWPL  + ++ DLAGVS  LL       L    +K KRRRR     VV W  P    G
Sbjct:   43 EEAQGTRRRSRCLSCSAA----LSDNPAGTDASETEGARPQCCSAQEKRDVVLESMLRWAVDVHFRQCSRLLQASVNRAVCHGVRQALVAAELSMRQASPPSFPPGCRLLLSFVGGLAGDGGAQIAGFLRERCGAELRRFLARGRWRPPSGTCRGRRHADTCTATGGAVAGRQAESPMLDAYVGHLCLCRHVSDPLAATHLAWLARQALTVLRML-DM-PEEGAHETTAAAERRQSSNFADVLASLSHALALLLTRPKRGGLCSSTVPETAGNLLEIVFDSDARPLSCVPRPLAEAAIDVLKEAGHIQLARSDELLR-----PPRGSRRG--EPNAAGRRTKSKLGPVAATVTEEGASFASGIDFRRASLAFRSTWSLAAAGVDTQLPSTSRSGR--------SRRGDGGGDSSXXXXXXXXXXXXADGDVDG----AGAIAGNGWGRVPDEVTMRVLSFMTPKRVCRLACVDRAWRELLMVSGVWRPFFEARWPLSAIGSDLDLAGVSDRLLAEG----LGSARKKAKRRRRHGKIGVVHWRTPEGRKG 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20693.5926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQS3_ECTSI6.000e-17346.54F-box, zinc finger protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5JX00_9PHAE4.080e-10543.27F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20693contigH-elongata_contig20693:232..4191 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionF-box, zinc finger protein
Ec32 orthologEc-01_000310.1
Exons6
Model size2568
Cds size2184
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20693.5926.1prot_H-elongata_contig20693.5926.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20693 264..3839 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930156.6092203-UTR-H-elongata_contig20693:231..2631622930156.6092203-UTR-H-elongata_contig20693:231..263Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20693 232..263 +
1691679302.7727807-UTR-H-elongata_contig20693:231..2631691679302.7727807-UTR-H-elongata_contig20693:231..263Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20693 232..263 +
1622930156.7625237-UTR-H-elongata_contig20693:3839..41911622930156.7625237-UTR-H-elongata_contig20693:3839..4191Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20693 3840..4191 +
1691679302.8658051-UTR-H-elongata_contig20693:3839..41911691679302.8658051-UTR-H-elongata_contig20693:3839..4191Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20693 3840..4191 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930156.667952-CDS-H-elongata_contig20693:263..2931622930156.667952-CDS-H-elongata_contig20693:263..293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 264..293 +
1691679302.7831247-CDS-H-elongata_contig20693:263..2931691679302.7831247-CDS-H-elongata_contig20693:263..293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 264..293 +
1622930156.6811996-CDS-H-elongata_contig20693:534..6181622930156.6811996-CDS-H-elongata_contig20693:534..618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 535..618 +
1691679302.798707-CDS-H-elongata_contig20693:534..6181691679302.798707-CDS-H-elongata_contig20693:534..618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 535..618 +
1622930156.697837-CDS-H-elongata_contig20693:950..12161622930156.697837-CDS-H-elongata_contig20693:950..1216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 951..1216 +
1691679302.8150501-CDS-H-elongata_contig20693:950..12161691679302.8150501-CDS-H-elongata_contig20693:950..1216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 951..1216 +
1622930156.716139-CDS-H-elongata_contig20693:1463..29791622930156.716139-CDS-H-elongata_contig20693:1463..2979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 1464..2979 +
1691679302.8248732-CDS-H-elongata_contig20693:1463..29791691679302.8248732-CDS-H-elongata_contig20693:1463..2979Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 1464..2979 +
1622930156.7316873-CDS-H-elongata_contig20693:3160..33281622930156.7316873-CDS-H-elongata_contig20693:3160..3328Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 3161..3328 +
1691679302.84356-CDS-H-elongata_contig20693:3160..33281691679302.84356-CDS-H-elongata_contig20693:3160..3328Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 3161..3328 +
1622930156.7477205-CDS-H-elongata_contig20693:3719..38391622930156.7477205-CDS-H-elongata_contig20693:3719..3839Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 3720..3839 +
1691679302.8569741-CDS-H-elongata_contig20693:3719..38391691679302.8569741-CDS-H-elongata_contig20693:3719..3839Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20693 3720..3839 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20693.5926.1

>prot_H-elongata_contig20693.5926.1 ID=prot_H-elongata_contig20693.5926.1|Name=mRNA_H-elongata_contig20693.5926.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=728bp
MAEVVRTLIKVQSELPVSSPVILHVLLHRLAALGSGKEADGRYSVLVSGL
EEALDACPAIPSDTLAASLDECLRRPSAATTWSVRATPVLVRGVLSLVTR
SPRSLCRAVVPVLVRFAAESECGMNGDTKEIPEKSSRGTRCYSCSTVGWF
RTTDEPDVSREPRPLRCSKQDIRDIVLQGVLKWVAKAYFREHSALLQTSL
HRAVCDGVRHVLDANAMAAGRVSTPHFPLACRLLLSLVGGVAPDGGCEVA
LFLQELCAAELRCVLARPEVCTPPRTARGARRHEPEGDEQALVALPLLEG
YAGHLCLYRHVRDEKMSSHLVWLLQQTLMVFRKLADLDPPDGANGRTQWS
RGTAALLRSLCGVLALLLTRPQRGDRNVAPVPAIAGSLLEIIFDSDACPL
ASLPSPLAGAAVVALRRAGFLQLARTEALLGFSIIWPSIISQKEARETAS
AGQSSPSMKGVTKGVEFRAADFAFQRSWSMVASEVDQYLPRLLELKEEED
NDDEGASADDGGYDSNDGECDWGRFETGSSAVDRWTRVPDEVTLRVFSFM
TPKRLSRLACVSRAWRELLGVISIWRPFFEARWPLRTLTNEADLAGVSKM
LLEAVDRPVLAEGERKYKRRRRCVVQWEIPADDDGRVAQTQDWMVLYRDQ
HRAELAARGRFASKTMFPWMVCPFLECVCSLKSEFAVKRHMKTHKPHRKV
RRRVRGRKLETAGEGSRVSSRGPPPGR*
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mRNA from alignment at H-elongata_contig20693:232..4191+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20693.5926.1 ID=mRNA_H-elongata_contig20693.5926.1|Name=mRNA_H-elongata_contig20693.5926.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3960bp|location=Sequence derived from alignment at H-elongata_contig20693:232..4191+ (Himanthalia elongata Himel1 dioecious)
GGGCGTCCCCGACGGCCTTCAGATGCGGCCTGATGGCGGAGGTCGTCCGA
ACCCTAATCAAGGTGAGCTCACGTCGCTCCTGCTCGGGGCTTGGGAGGCC
TTGGGGGTTGAAGAGTCGTCTGCATGTGTCTGAGGCCGCTTGTCGATATT
TCGGAAACCTCTGAGCTCAAGCGAGCAGCAAAGCCGTGTACGTGTGATGT
GATATGTTATTTCGTTTTCATCAACAATCCATCGTCTTCGTACCTGCAGT
TGACCTTATCCCGATCGATCACGATGCGCCCTCGTTGACTCGCTCACGCG
CAGGTACAATCCGAACTGCCTGTTTCTTCTCCTGTTATTCTTCACGTCCT
GCTTCATCGCCTGGCTGCCCTCGGCTCCGGTAAGGAGGTGAGACAAATTG
GTGGGCGCTCGATGAAGGACCCCCGCCCTAACGACAGCGTATCAAAAGTC
ATCTGTCTCATCCACTTCGATGAGTGCCGTTCCGGTGTCAGATGTACCTT
CCCAACGAAAAAATGCTATCAAAGCCTTCTCAGTGCGCGAAGCTTCAGCA
GTTGTTTTGACTACGGTAATTTGATTTTGCTTGTGGGCATTATCGTTTTT
GTGTTTAGTCCTTCCTTGCTGCGGCGGTTGATGCCGCAAATGCCCATATG
CGCGTAACATTCGTCACTTGGATTATCTCCGAACGAAAAATTTCGGATCG
GCCACCACAACGCCAGCAGGCCGATGGACGCTACAGCGTACTTGTTTCTG
GGCTGGAGGAGGCTCTCGATGCCTGCCCTGCCATACCGAGTGACACTCTG
GCAGCGTCGCTCGATGAATGCCTCCGACGGCCCTCTGCCGCCACGACGTG
GTCGGTGCGCGCCACGCCCGTTCTAGTCCGCGGGGTGCTATCGCTGGTGA
CACGATCCCCGAGGTCGCTGTGTCGAGCGGTAGTCCCGGTCCTGGTGCGC
TTCGCCGCGGAGAGCGAATGCGGAATGAATGGTGAGTGAGGTAATTCCGA
CGCCTGCGCGTGCCCTGCAGAGATCAGTAGTACACGCGACGCGAGCGCTT
CTTGTTGCAGAATTCCCAAGGATTGTCTGACTGAACTTTTGGAAGCGGCA
CTTTCGACGGCAAAAAAAACAACTCTCGACAGGTTCCGTACCCCCCTCCC
CCCGTCTCAACTGCTGAATTCGATGTTTCTGGTCGGTAGCGATCGACAAC
AGTGCAGGGCCTTCATCGTCTGCTGACTAAAGCACGAAGGAGATTCCGGA
GAAATCTTCACGGGGAACCCGATGCTATTCGTGCAGCACGGTCGGCTGGT
TCCGTACAACAGACGAGCCCGACGTTTCAAGAGAACCGCGGCCCTTGCGC
TGTTCGAAGCAAGATATAAGGGATATCGTGCTGCAGGGTGTGCTGAAATG
GGTCGCGAAAGCTTACTTCCGCGAGCACTCCGCCTTGCTGCAGACATCCC
TACACCGGGCTGTGTGTGACGGAGTCCGACATGTGCTGGATGCTAATGCG
ATGGCGGCCGGGCGCGTTTCTACACCGCATTTTCCGCTAGCGTGTAGGCT
TCTTCTGTCCCTGGTGGGAGGGGTCGCCCCGGACGGTGGGTGCGAGGTCG
CTCTGTTCCTTCAAGAGTTGTGTGCAGCTGAGCTACGATGCGTCCTCGCT
CGTCCGGAGGTATGCACGCCTCCGAGAACTGCTCGAGGAGCACGGCGCCA
TGAACCAGAGGGCGACGAGCAAGCGTTGGTGGCGTTGCCATTACTGGAAG
GTTATGCTGGGCATCTTTGCCTGTATCGGCACGTGAGGGACGAGAAGATG
TCGAGTCATCTGGTGTGGCTGTTGCAGCAAACGTTGATGGTTTTCCGGAA
ACTGGCCGACTTGGACCCTCCAGACGGCGCGAACGGTCGAACACAGTGGA
GTCGAGGGACAGCAGCCTTGCTGAGATCGCTGTGCGGCGTGCTCGCCCTG
CTTCTGACTCGCCCCCAACGAGGGGACAGAAACGTGGCTCCGGTTCCTGC
CATTGCTGGGAGCCTGTTGGAGATCATATTCGACAGTGACGCGTGCCCTC
TGGCGAGCTTGCCAAGCCCGCTAGCGGGTGCAGCGGTCGTTGCGCTTCGA
AGAGCCGGTTTCTTGCAACTCGCCCGCACGGAAGCCCTTCTGGGATTCTC
CATTATCTGGCCGTCAATAATATCACAGAAGGAGGCGAGAGAAACGGCCA
GCGCGGGTCAAAGCTCGCCGTCCATGAAAGGCGTTACCAAAGGCGTTGAA
TTTCGAGCAGCCGATTTTGCTTTCCAGCGAAGTTGGTCGATGGTCGCGTC
TGAGGTGGATCAATATCTCCCTCGCTTGTTGGAGCTCAAGGAGGAGGAGG
ACAACGACGACGAAGGTGCCTCCGCGGATGACGGAGGCTACGATTCGAAT
GACGGGGAATGCGACTGGGGAAGGTTCGAGACAGGTTCGAGCGCAGTCGA
CCGCTGGACACGAGTTCCGGACGAGGTTACCTTGCGCGTGTTTTCCTTTA
TGACCCCGAAGCGTTTGTCCCGCCTCGCGTGCGTGAGTCGTGCTTGGAGG
GAGCTTCTCGGGGTCATTTCGATATGGAGACCCTTTTTCGAAGCTCGCTG
GCCGCTCAGGACGTTGACGAATGAGGCGGACCTTGCGGGGGTGTCGAAAA
TGCTGCTTGAGGCGGTAGATCGTCCAGTGCTAGCAGAAGGAGAGCGCAAG
TATAAGCGGCGGAGACGCTGCGTCGTGCAGTGGGAAATTCCTGCAGATGT
CTGTGCTACCGTGTTTCTCATTCTTAAGGGAGCTTTGCGAGATCCTACGA
CCCGCATGCAAGGACTTGTCTTACCGGGAAATCAAAAACCAAAATTCGCC
TTCAAAGAGCAGTGACATGTTTTGAGAAGTAATATACTGTAGTAATGTAT
AATTTTCCTAGTTTTTGCTGGTTTGGCAGGACGATGGCCGCGTGGCGCAA
ACGCAAGACTGGATGGTACTCTACAGAGATCAGCATAGGGCGGAGCTAGC
GGCTAGGGGGAGGTTTGCCTCCAAGACGATGTTTCCATGGATGGTGTGTC
CTTTTTTGGAATGTGTCTGTTCGCTCAAGTCCGAGTTCGCCGTGAAGGTG
AGGGAATAGAGCGCATTTATTCATTCGAGGGTCAACGACCGGTCGATTAG
AGAAGACTTTTGTTTTTAAATGTCTTCGGCGTACGGAATATTCCGACTAC
ACTGTATGTTTCATCGTTGTAAAACGTTTGTGTAAGTGAAATCTTAGGTG
GATTATCTTCATCCCGAAGTAAGCAATCTGTTCCAGCAATAAGCGCTAGA
CCTGAGAGGTTGGCTTGGAGGAGTGGGCTTTTTCAGTGCTGCCCTGTAAT
CTTGCCTTCGACATGGCTCGGTTGGTTGGCGTGATGGCGCATATTTCGCT
CGCGTTCGAGGCCTTAACGCGCGCGTTGCGATCTCCTCTTGTCCTCCGGC
CCGCCGTCCCATCGGCTCCCTCCCTTGAACGCCTGCAGAGGCACATGAAA
ACGCACAAGCCACACCGAAAGGTGAGACGTCGCGTCCGTGGTCGGAAGCT
GGAAACTGCCGGCGAAGGGTCGAGAGTAAGCTCGAGGGGACCGCCTCCGG
GACGTTGAATGCACACTTAAGCTCAACGCAGGGCAACGTAGACAAACGGC
CACGAAAGCCGAGATTTGAAGATACGTTCCGAATAAATGACCATTTACTA
GGTTACCAGTACATGTCTCCCGGTAGCATGATGAAGAGCTTGCGCACGTA
CCCGAGTTTGGTGGATTTGTATAATAAGAGCAGCGCCGAGACAATTTGCT
CGGGGGGCTTAAACGCTTGAGCACGAAGCCCCACCTTGGACAGAGTGGGA
TGCATTTTTTTCTTTCTCGCTGAAGATAGTGGCGTATCATAGTTCTCCTT
CTAGTGCTGGTTTTCCTGTTGCTAACTCCGGAAAAGGTAGGCGCGCCATG
CTGCCGCATT
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Coding sequence (CDS) from alignment at H-elongata_contig20693:232..4191+

>mRNA_H-elongata_contig20693.5926.1 ID=mRNA_H-elongata_contig20693.5926.1|Name=mRNA_H-elongata_contig20693.5926.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4368bp|location=Sequence derived from alignment at H-elongata_contig20693:232..4191+ (Himanthalia elongata Himel1 dioecious)
ATGGCGGAGGTCGTCCGAACCCTAATCAAGATGGCGGAGGTCGTCCGAAC
CCTAATCAAGGTACAATCCGAACTGCCTGTTTCTTCTCCTGTTATTCTTC
ACGTCCTGCTTCATCGCCTGGCTGCCCTCGGCTCCGGTAAGGAGGTACAA
TCCGAACTGCCTGTTTCTTCTCCTGTTATTCTTCACGTCCTGCTTCATCG
CCTGGCTGCCCTCGGCTCCGGTAAGGAGGCCGATGGACGCTACAGCGTAC
TTGTTTCTGGGCTGGAGGAGGCTCTCGATGCCTGCCCTGCCATACCGAGT
GACACTCTGGCAGCGTCGCTCGATGAATGCCTCCGACGGCCCTCTGCCGC
CACGACGTGGTCGGTGCGCGCCACGCCCGTTCTAGTCCGCGGGGTGCTAT
CGCTGGTGACACGATCCCCGAGGTCGCTGTGTCGAGCGGTAGTCCCGGTC
CTGGTGCGCTTCGCCGCGGAGAGCGAATGCGGAATGAATGGTGAGCCGAT
GGACGCTACAGCGTACTTGTTTCTGGGCTGGAGGAGGCTCTCGATGCCTG
CCCTGCCATACCGAGTGACACTCTGGCAGCGTCGCTCGATGAATGCCTCC
GACGGCCCTCTGCCGCCACGACGTGGTCGGTGCGCGCCACGCCCGTTCTA
GTCCGCGGGGTGCTATCGCTGGTGACACGATCCCCGAGGTCGCTGTGTCG
AGCGGTAGTCCCGGTCCTGGTGCGCTTCGCCGCGGAGAGCGAATGCGGAA
TGAATGGTGACACGAAGGAGATTCCGGAGAAATCTTCACGGGGAACCCGA
TGCTATTCGTGCAGCACGGTCGGCTGGTTCCGTACAACAGACGAGCCCGA
CGTTTCAAGAGAACCGCGGCCCTTGCGCTGTTCGAAGCAAGATATAAGGG
ATATCGTGCTGCAGGGTGTGCTGAAATGGGTCGCGAAAGCTTACTTCCGC
GAGCACTCCGCCTTGCTGCAGACATCCCTACACCGGGCTGTGTGTGACGG
AGTCCGACATGTGCTGGATGCTAATGCGATGGCGGCCGGGCGCGTTTCTA
CACCGCATTTTCCGCTAGCGTGTAGGCTTCTTCTGTCCCTGGTGGGAGGG
GTCGCCCCGGACGGTGGGTGCGAGGTCGCTCTGTTCCTTCAAGAGTTGTG
TGCAGCTGAGCTACGATGCGTCCTCGCTCGTCCGGAGGTATGCACGCCTC
CGAGAACTGCTCGAGGAGCACGGCGCCATGAACCAGAGGGCGACGAGCAA
GCGTTGGTGGCGTTGCCATTACTGGAAGGTTATGCTGGGCATCTTTGCCT
GTATCGGCACGTGAGGGACGAGAAGATGTCGAGTCATCTGGTGTGGCTGT
TGCAGCAAACGTTGATGGTTTTCCGGAAACTGGCCGACTTGGACCCTCCA
GACGGCGCGAACGGTCGAACACAGTGGAGTCGAGGGACAGCAGCCTTGCT
GAGATCGCTGTGCGGCGTGCTCGCCCTGCTTCTGACTCGCCCCCAACGAG
GGGACAGAAACGTGGCTCCGGTTCCTGCCATTGCTGGGAGCCTGTTGGAG
ATCATATTCGACAGTGACGCGTGCCCTCTGGCGAGCTTGCCAAGCCCGCT
AGCGGGTGCAGCGGTCGTTGCGCTTCGAAGAGCCGGTTTCTTGCAACTCG
CCCGCACGGAAGCCCTTCTGGGATTCTCCATTATCTGGCCGTCAATAATA
TCACAGAAGGAGGCGAGAGAAACGGCCAGCGCGGGTCAAAGCTCGCCGTC
CATGAAAGGCGTTACCAAAGGCGTTGAATTTCGAGCAGCCGATTTTGCTT
TCCAGCGAAGTTGGTCGATGGTCGCGTCTGAGGTGGATCAATATCTCCCT
CGCTTGTTGGAGCTCAAGGAGGAGGAGGACAACGACGACGAAGGTGCCTC
CGCGGATGACGGAGGCTACGATTCGAATGACGGGGAATGCGACTGGGGAA
GGTTCGAGACAGGTTCGAGCGCAGTCGACCGCTGGACACGAGTTCCGGAC
GAGGTTACCTTGCGCGTGTTTTCCTTTATGACCCCGAAGCGTTTGTCCCG
CCTCGCGTGCGTGAGTCGTGCTTGGAGGGAGCTTCTCGGGGTCATTTCGA
TATGGAGACCCTTTTTCGAAGCTCGCTGGCCGCTCAGGACGTTGACGAAT
GAGGCGGACCTTGCGGGGGTGTCGAAAATGCTGCTTGAGGCGGTAGATCG
TCCAGTGCTAGCAGAAGGAGAGCGCAAGTATAAGCGGCGGAGACGCTGCG
TCGTGCAGTGGGAAATTCCTGCAGATCACGAAGGAGATTCCGGAGAAATC
TTCACGGGGAACCCGATGCTATTCGTGCAGCACGGTCGGCTGGTTCCGTA
CAACAGACGAGCCCGACGTTTCAAGAGAACCGCGGCCCTTGCGCTGTTCG
AAGCAAGATATAAGGGATATCGTGCTGCAGGGTGTGCTGAAATGGGTCGC
GAAAGCTTACTTCCGCGAGCACTCCGCCTTGCTGCAGACATCCCTACACC
GGGCTGTGTGTGACGGAGTCCGACATGTGCTGGATGCTAATGCGATGGCG
GCCGGGCGCGTTTCTACACCGCATTTTCCGCTAGCGTGTAGGCTTCTTCT
GTCCCTGGTGGGAGGGGTCGCCCCGGACGGTGGGTGCGAGGTCGCTCTGT
TCCTTCAAGAGTTGTGTGCAGCTGAGCTACGATGCGTCCTCGCTCGTCCG
GAGGTATGCACGCCTCCGAGAACTGCTCGAGGAGCACGGCGCCATGAACC
AGAGGGCGACGAGCAAGCGTTGGTGGCGTTGCCATTACTGGAAGGTTATG
CTGGGCATCTTTGCCTGTATCGGCACGTGAGGGACGAGAAGATGTCGAGT
CATCTGGTGTGGCTGTTGCAGCAAACGTTGATGGTTTTCCGGAAACTGGC
CGACTTGGACCCTCCAGACGGCGCGAACGGTCGAACACAGTGGAGTCGAG
GGACAGCAGCCTTGCTGAGATCGCTGTGCGGCGTGCTCGCCCTGCTTCTG
ACTCGCCCCCAACGAGGGGACAGAAACGTGGCTCCGGTTCCTGCCATTGC
TGGGAGCCTGTTGGAGATCATATTCGACAGTGACGCGTGCCCTCTGGCGA
GCTTGCCAAGCCCGCTAGCGGGTGCAGCGGTCGTTGCGCTTCGAAGAGCC
GGTTTCTTGCAACTCGCCCGCACGGAAGCCCTTCTGGGATTCTCCATTAT
CTGGCCGTCAATAATATCACAGAAGGAGGCGAGAGAAACGGCCAGCGCGG
GTCAAAGCTCGCCGTCCATGAAAGGCGTTACCAAAGGCGTTGAATTTCGA
GCAGCCGATTTTGCTTTCCAGCGAAGTTGGTCGATGGTCGCGTCTGAGGT
GGATCAATATCTCCCTCGCTTGTTGGAGCTCAAGGAGGAGGAGGACAACG
ACGACGAAGGTGCCTCCGCGGATGACGGAGGCTACGATTCGAATGACGGG
GAATGCGACTGGGGAAGGTTCGAGACAGGTTCGAGCGCAGTCGACCGCTG
GACACGAGTTCCGGACGAGGTTACCTTGCGCGTGTTTTCCTTTATGACCC
CGAAGCGTTTGTCCCGCCTCGCGTGCGTGAGTCGTGCTTGGAGGGAGCTT
CTCGGGGTCATTTCGATATGGAGACCCTTTTTCGAAGCTCGCTGGCCGCT
CAGGACGTTGACGAATGAGGCGGACCTTGCGGGGGTGTCGAAAATGCTGC
TTGAGGCGGTAGATCGTCCAGTGCTAGCAGAAGGAGAGCGCAAGTATAAG
CGGCGGAGACGCTGCGTCGTGCAGTGGGAAATTCCTGCAGATGACGATGG
CCGCGTGGCGCAAACGCAAGACTGGATGGTACTCTACAGAGATCAGCATA
GGGCGGAGCTAGCGGCTAGGGGGAGGTTTGCCTCCAAGACGATGTTTCCA
TGGATGGTGTGTCCTTTTTTGGAATGTGTCTGTTCGCTCAAGTCCGAGTT
CGCCGTGAAGGACGATGGCCGCGTGGCGCAAACGCAAGACTGGATGGTAC
TCTACAGAGATCAGCATAGGGCGGAGCTAGCGGCTAGGGGGAGGTTTGCC
TCCAAGACGATGTTTCCATGGATGGTGTGTCCTTTTTTGGAATGTGTCTG
TTCGCTCAAGTCCGAGTTCGCCGTGAAGAGGCACATGAAAACGCACAAGC
CACACCGAAAGGTGAGACGTCGCGTCCGTGGTCGGAAGCTGGAAACTGCC
GGCGAAGGGTCGAGAGTAAGCTCGAGGGGACCGCCTCCGGGACGTTGAAG
GCACATGAAAACGCACAAGCCACACCGAAAGGTGAGACGTCGCGTCCGTG
GTCGGAAGCTGGAAACTGCCGGCGAAGGGTCGAGAGTAAGCTCGAGGGGA
CCGCCTCCGGGACGTTGA
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