mRNA_H-elongata_contig206406.5903.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: D7FP79_ECTSI (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP79_ECTSI) HSP 1 Score: 114 bits (284), Expect = 5.860e-28 Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VHEGLRKW+ ENVS +VA+K VRIIYGGSVNAGSAPTLG KPDIDGFLVGGASLKPEFV+I NAK
Sbjct: 181 QEVHEGLRKWVAENVSASVADK--VRIIYGGSVNAGSAPTLGSKPDIDGFLVGGASLKPEFVEIVNAK 246
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A0A6YYW3_SACLA (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=A0A0A6YYW3_SACLA) HSP 1 Score: 110 bits (275), Expect = 9.430e-27 Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VHEGLRKWI ENVS +VAEK +RIIYGGSVNAGSAPTLG K DIDGFLVGGASLKPEFV I NAK
Sbjct: 207 QEVHEGLRKWIAENVSASVAEK--IRIIYGGSVNAGSAPTLGAKADIDGFLVGGASLKPEFVDIVNAK 272
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A0A6YYW1_DICDH (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYW1_DICDH) HSP 1 Score: 105 bits (263), Expect = 4.660e-25 Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VH LRKWI ENVS AVA+K VRIIYGGSVNAG+APTLG+K DIDGFLVGGASLKPEFV+I NAK
Sbjct: 207 QEVHLELRKWIAENVSAAVADK--VRIIYGGSVNAGTAPTLGEKADIDGFLVGGASLKPEFVEIVNAK 272
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: K1PJ59_CRAGI (Triosephosphate isomerase n=4 Tax=Crassostrea TaxID=6564 RepID=K1PJ59_CRAGI) HSP 1 Score: 92.4 bits (228), Expect = 3.970e-22 Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VHE LR W+ E VS VA A VRIIYGGSVNAG+ LG KPDIDGFLVGGASLKP+FV+I NA+
Sbjct: 103 QEVHEKLRAWLAERVSKEVA--ASVRIIYGGSVNAGNCKDLGAKPDIDGFLVGGASLKPDFVQIVNAR 168
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A183SWF8_SCHSO (Triosephosphate isomerase n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183SWF8_SCHSO) HSP 1 Score: 92.4 bits (228), Expect = 5.830e-22 Identity = 43/68 (63.24%), Postives = 57/68 (83.82%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VH+ +R W+ ++V P+VA+K VRI+YGGSVNAG+A LG +PD+DGFLVGGASLKPEFV I NA+
Sbjct: 120 QEVHKAVRDWMRDHVDPSVADK--VRILYGGSVNAGNAKELGSQPDVDGFLVGGASLKPEFVNIINAR 185
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A3S5CBK8_9PLAT (Triosephosphate isomerase n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5CBK8_9PLAT) HSP 1 Score: 90.9 bits (224), Expect = 8.050e-22 Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VH LRKW+ ENVSPAV+ A VRI+YGGSV + + L +PDIDGFLVGGASLKPEF+ I NAK
Sbjct: 77 QEVHAALRKWLSENVSPAVS--ASVRILYGGSVTSANCKDLASRPDIDGFLVGGASLKPEFIDIINAK 142
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A1B0GM07_PHLPP (Triosephosphate isomerase n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0GM07_PHLPP) HSP 1 Score: 89.4 bits (220), Expect = 8.210e-22 Identity = 46/68 (67.65%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VH+ LRKWI ENVS AVA A +RI YGGSV AG+ L KPDIDGFLVGGASLKPEF I NA+
Sbjct: 26 QEVHQALRKWISENVSAAVA--AALRIQYGGSVTAGNCRELASKPDIDGFLVGGASLKPEFKDIVNAR 91
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A1D2AIY9_ORNBR (Triosephosphate isomerase (Fragment) n=1 Tax=Ornithodoros brasiliensis TaxID=888526 RepID=A0A1D2AIY9_ORNBR) HSP 1 Score: 90.5 bits (223), Expect = 1.510e-21 Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VH LRKW+ N+SP VA K +RI YGGSVNAG+ L KPDIDGFLVGGASLKPEFV+I NA+
Sbjct: 88 QEVHGQLRKWLEHNISPDVASK--IRIQYGGSVNAGNCKELAKKPDIDGFLVGGASLKPEFVEIINAR 153
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A8E0VGU1_9TREM (Triosephosphate isomerase n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0VGU1_9TREM) HSP 1 Score: 92.8 bits (229), Expect = 1.680e-21 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANAK 204
++VH +R+W+ +NVSPAVA VRIIYGGSVNA + LG KPD+DGFLVGGASLKPEFV I NA+
Sbjct: 186 QEVHHAVRQWLEKNVSPAVASS--VRIIYGGSVNAANCKELGKKPDVDGFLVGGASLKPEFVDICNAR 251
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Match: A0A6G4ZWW8_RHIMP (Triosephosphate isomerase (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G4ZWW8_RHIMP) HSP 1 Score: 90.5 bits (223), Expect = 3.070e-21 Identity = 46/67 (68.66%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 1 RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFLVGGASLKPEFVKIANA 201
++VH +R W+ NVSP VA K VRI YGGSVNAG+ LG KPDIDGFLVGGASLKPEFV+I NA
Sbjct: 116 QEVHSKVRNWLSTNVSPDVASK--VRIQYGGSVNAGNCKELGRKPDIDGFLVGGASLKPEFVQIINA 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig206406.5903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig206406.5903.1 >prot_H-elongata_contig206406.5903.1 ID=prot_H-elongata_contig206406.5903.1|Name=mRNA_H-elongata_contig206406.5903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp RQVHEGLRKWIGENVSPAVAEKARVRIIYGGSVNAGSAPTLGDKPDIDGFback to top mRNA from alignment at H-elongata_contig206406:47..663+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig206406.5903.1 ID=mRNA_H-elongata_contig206406.5903.1|Name=mRNA_H-elongata_contig206406.5903.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=617bp|location=Sequence derived from alignment at H-elongata_contig206406:47..663+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig206406:47..663+ >mRNA_H-elongata_contig206406.5903.1 ID=mRNA_H-elongata_contig206406.5903.1|Name=mRNA_H-elongata_contig206406.5903.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at H-elongata_contig206406:47..663+ (Himanthalia elongata Himel1 dioecious)back to top |