mRNA_H-elongata_contig20549.5860.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20549.5860.1
Unique NamemRNA_H-elongata_contig20549.5860.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: D8LN04_ECTSI (Myosin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN04_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 4.430e-106
Identity = 172/208 (82.69%), Postives = 185/208 (88.94%), Query Frame = 1 
Query:    1 LKKVSEERVQRGDPTCLKGIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            + KVS+E +QRGDP+CLKG+EDMVKMDILTVGSVLHNLRTRYA+Q IYTSVGSILAAINPYV IPSLYDE+CM  YANMATDAGA PHPYELMELAYR        GLI D+RSQSVLISGESGAGKTETTKYLLSYLSHRSSTME+ERREAVP ++    RRNS+GGR SVE+SVVMSNPVMEAFANAKTTRNHNSSRFGKYIQV L
Sbjct:   47 VSKVSDEWLQRGDPSCLKGVEDMVKMDILTVGSVLHNLRTRYANQDIYTSVGSILAAINPYVLIPSLYDENCMNLYANMATDAGAPPHPYELMELAYR--------GLITDHRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMEKERREAVPSVEQ---RRNSIGGRFSVEDSVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVTL 243
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A6H5JIF4_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF4_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 6.990e-95
Identity = 174/251 (69.32%), Postives = 188/251 (74.90%), Query Frame = 1 
Query:    1 LKKVSEERVQRGDPTCLKGIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQ------------------------------AKSG-------------RRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            + KVSEE +QRGDP+CLKG+EDMVKMD+LTVGSVLHNLRTRYA+Q IYTSVGSILAAINPYV IPSLYDE+CM  YANMATDAGA PHPYELMELAYR        GLI D+RSQSVLISGESGAGKTETTKYLLSYLSHRSSTME+ERREAVP ++                               +SG             RRNS+GGR SVE+SVVMSNPVMEAFANAKTTRNHNSSRFGKYIQV L
Sbjct:   47 VSKVSEEWLQRGDPSCLKGVEDMVKMDVLTVGSVLHNLRTRYANQDIYTSVGSILAAINPYVLIPSLYDENCMNLYANMATDAGAPPHPYELMELAYR--------GLITDHRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMEKERREAVPSVEQAIRGGGGGTGDGRKGAGGGVPSGIARGASGRSGLALIITIAVCFFQRRNSIGGRFSVEDSVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVTL 289
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A835YVE9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.940e-58
Identity = 115/196 (58.67%), Postives = 130/196 (66.33%), Query Frame = 1 
Query:   37 DPTCLKGIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            D   L G +DMVKMD LT GSVLHNLR RY    IYT+VGSIL A+NPY  +P LYDE  M  Y+  ATDA   PHPY LMELAYR        GL++D  SQS+LISGESGAGKTETTKYLL YLS                ++A  G     GG + V E+VV  NPVMEAFANAKT+RN+NSSRFGKYI+V L
Sbjct:   62 DQQSLLGTDDMVKMDALTEGSVLHNLRVRYRDYTIYTAVGSILVAVNPYQPLPRLYDEARMRVYSAAATDATPPPHPYHLMELAYR--------GLVSDRASQSILISGESGAGKTETTKYLLQYLS----------------VRAGDG---GSGGSVGVAEAVVQQNPVMEAFANAKTSRNNNSSRFGKYIKVEL 230
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A0V0HMK8_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HMK8_SOLCH)

HSP 1 Score: 149 bits (375), Expect = 2.150e-41
Identity = 86/195 (44.10%), Postives = 120/195 (61.54%), Query Frame = 1 
Query:   40 PTCLKGIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            P+C  G++DM K+  L    VL NLR+RY   +IYT  GSIL A+NP+ R+P LY +  ME+Y  ++      PHP+ + + AYRQ        +I +  SQS+L+SGESGAGKTE+TK L+ YL++                    G R +  GR SVE+ V+ SNPV+EAF NAKT RN+NSSRFGK+++++ 
Sbjct:   60 PSC--GVDDMTKLSYLHEPGVLQNLRSRYDMNEIYTYTGSILIAVNPFKRLPHLYAKSVMEQYKGVSLGE-LPPHPFAVADSAYRQ--------MIHEGISQSILVSGESGAGKTESTKMLMQYLAYM-------------------GGRAAAEGR-SVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQF 223
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A484MTJ0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MTJ0_9ASTE)

HSP 1 Score: 153 bits (387), Expect = 6.890e-41
Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 1 
Query:   55 GIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            G++DM K+  L    VL N + RYA+ +IYT  GSIL A+NP+ R+P LY +D ME+Y   A     +PHP+ + + AYRQ        ++ D  SQS+L+SGESGAGKTE+TK L+ YL++                    G R +  GR SVE+ V+ SNPV+EAF NAKT RN+NSSRFGK+++++ 
Sbjct:   63 GVDDMTKLAYLHEPGVLDNFKCRYATNEIYTYTGSILIAVNPFKRLPDLYGKDVMEKYKG-AVFGDLSPHPFAIADAAYRQ--------MVNDGISQSILVSGESGAGKTESTKMLMQYLAYM-------------------GGRAAADGR-SVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQF 223
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A7N2LY20_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LY20_QUELO)

HSP 1 Score: 149 bits (375), Expect = 1.050e-40
Identity = 84/195 (43.08%), Postives = 118/195 (60.51%), Query Frame = 1 
Query:   40 PTCLKGIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            P+C  G++DM ++  L    VL NLR RY   +IYT  G+IL A+NP+ R+P LYD   ME+Y   A     +PHP+ + + AYR         +I +  SQS+L+SGESGAGKTE+TK L+ YL++                    G + +  GR SVE+ V+ SNPV+EAF NAKT RN+NSSRFGK+++++ 
Sbjct:   60 PSC--GVDDMTRLAYLHEPGVLQNLRCRYDINEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGAAIGE-LSPHPFAIADAAYRL--------MINEGISQSILVSGESGAGKTESTKMLMRYLAYM-------------------GGKAAADGRRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQF 224
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A484L7U1_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484L7U1_9ASTE)

HSP 1 Score: 155 bits (391), Expect = 1.120e-40
Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 1 
Query:   55 GIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            G++DM K+  L    VL NL+ RYA+ +IYT  GSIL A+NP+ R+P LY +D ME+Y   A     +PHP+ + + AYRQ        ++ D  SQS+L+SGESGAGKTE+TK L+ YL++                    G R +  GR SVE+ V+ SNPV+EAF NAKT RN+NSSRFGK+++++ 
Sbjct:   63 GVDDMTKLAYLHEPGVLDNLKCRYATNEIYTYTGSILIAVNPFKRLPDLYGKDVMEKYKG-AVFGDLSPHPFAIADAAYRQ--------MVNDGISQSILVSGESGAGKTESTKMLMQYLAYM-------------------GGRAAADGR-SVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQF 223
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A7C9DUP8_OPUST (Myosin motor domain-containing protein (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DUP8_OPUST)

HSP 1 Score: 144 bits (364), Expect = 2.740e-40
Identity = 80/190 (42.11%), Postives = 116/190 (61.05%), Query Frame = 1 
Query:   55 GIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            G++DM  +  L    VL+NL  RYA   IYT  GSIL A+NP+ ++P LY+E  ME+Y   A     +PH + + + +YR         +I++NRSQS+L+SGESGAGKTETTK ++ YL++                    GR  ++G   SVE+ V+ SNP++EAF NA+T RN NSSRFGK+++++ 
Sbjct:    2 GVDDMTNLAYLNEPGVLYNLERRYALDSIYTYTGSILIAVNPFTKLPHLYNEHMMEQYKG-ALFGELSPHVFAVADASYRA--------MISENRSQSILVSGESGAGKTETTKLIMQYLAY------------------VGGR--ALGDDRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQF 162
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BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A328DW23_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328DW23_9ASTE)

HSP 1 Score: 155 bits (391), Expect = 6.270e-40
Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 1 
Query:   55 GIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            G++DM K+  L    VL NL+ RYA+ +IYT  GSIL A+NP+ R+P LY +D ME+Y   A     +PHP+ + + AYRQ        ++ D  SQS+L+SGESGAGKTE+TK L+ YL++                    G R +  GR SVE+ V+ SNPV+EAF NAKT RN+NSSRFGK+++++ 
Sbjct:   68 GVDDMTKLAYLHEPGVLDNLKCRYATNEIYTYTGSILIAVNPFKRLPDLYGKDVMEKYKG-AVFGDLSPHPFAIADAAYRQ--------MVNDGISQSILVSGESGAGKTESTKMLMQYLAYM-------------------GGRAAADGR-SVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQF 228
[Close]
BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Match: A0A446NGW8_TRITD (Uncharacterized protein n=5 Tax=Triticinae TaxID=1648030 RepID=A0A446NGW8_TRITD)

HSP 1 Score: 147 bits (372), Expect = 7.410e-40
Identity = 82/190 (43.16%), Postives = 117/190 (61.58%), Query Frame = 1 
Query:   55 GIEDMVKMDILTVGSVLHNLRTRYASQKIYTSVGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQGEKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERREAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRFGKYIQVRL 624
            G++DM ++  L    VL NL TRY   +IYT  GSIL A+NP+ R+P LYD   ME+Y   A     +PH + + ++AYR+        +I + ++ S+L+SGESGAGKTETTK L+ YL+H                    G R+ + GR +VE+ V+ SNPV+EAF NAKT RN+NSSRFGK+++++ 
Sbjct:   63 GVDDMTRLSYLHEPGVLQNLATRYELNEIYTYTGSILIAVNPFQRLPHLYDTHMMEQYKG-ADFGELSPHVFAIADVAYRE--------MINEGKNNSILVSGESGAGKTETTKMLMRYLAHL-------------------GGRSGVEGR-TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQF 223
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20549.5860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN04_ECTSI4.430e-10682.69Myosin motor domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JIF4_9PHAE6.990e-9569.32Myosin motor domain-containing protein n=1 Tax=Ect... [more]
A0A835YVE9_9STRA2.940e-5858.67P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0V0HMK8_SOLCH2.150e-4144.10Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A484MTJ0_9ASTE6.890e-4144.74Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A7N2LY20_QUELO1.050e-4043.08Uncharacterized protein n=1 Tax=Quercus lobata Tax... [more]
A0A484L7U1_9ASTE1.120e-4045.26Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A7C9DUP8_OPUST2.740e-4042.11Myosin motor domain-containing protein (Fragment) ... [more]
A0A328DW23_9ASTE6.270e-4045.26Uncharacterized protein n=1 Tax=Cuscuta australis ... [more]
A0A446NGW8_TRITD7.410e-4043.16Uncharacterized protein n=5 Tax=Triticinae TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20549contigH-elongata_contig20549:564..4672 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.5
Seed ortholog evalue5.7e-88
Seed eggNOG ortholog2880.D8LN04
KEGG koko:K10357,ko:K10359,ko:K21868
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03029,ko03036,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMyosin head, motor domain
Ec32 orthologEc-05_000650.1
Exons4
Model size624
Cds size624
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20549.5860.1prot_H-elongata_contig20549.5860.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20549 564..4672 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930150.9904823-CDS-H-elongata_contig20549:563..7071622930150.9904823-CDS-H-elongata_contig20549:563..707Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 564..707 -
1691679300.5669308-CDS-H-elongata_contig20549:563..7071691679300.5669308-CDS-H-elongata_contig20549:563..707Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 564..707 -
1622930151.025123-CDS-H-elongata_contig20549:2715..28781622930151.025123-CDS-H-elongata_contig20549:2715..2878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 2716..2878 -
1691679300.578622-CDS-H-elongata_contig20549:2715..28781691679300.578622-CDS-H-elongata_contig20549:2715..2878Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 2716..2878 -
1622930151.041888-CDS-H-elongata_contig20549:3839..40401622930151.041888-CDS-H-elongata_contig20549:3839..4040Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 3840..4040 -
1691679300.5878582-CDS-H-elongata_contig20549:3839..40401691679300.5878582-CDS-H-elongata_contig20549:3839..4040Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 3840..4040 -
1622930151.0556664-CDS-H-elongata_contig20549:4556..46721622930151.0556664-CDS-H-elongata_contig20549:4556..4672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 4557..4672 -
1691679300.5984879-CDS-H-elongata_contig20549:4556..46721691679300.5984879-CDS-H-elongata_contig20549:4556..4672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20549 4557..4672 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20549.5860.1

>prot_H-elongata_contig20549.5860.1 ID=prot_H-elongata_contig20549.5860.1|Name=mRNA_H-elongata_contig20549.5860.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp
LKKVSEERVQRGDPTCLKGIEDMVKMDILTVGSVLHNLRTRYASQKIYTS
VGSILAAINPYVRIPSLYDEDCMERYANMATDAGAAPHPYELMELAYRQG
EKGERAGLIADNRSQSVLISGESGAGKTETTKYLLSYLSHRSSTMERERR
EAVPEIQAKSGRRNSMGGRISVEESVVMSNPVMEAFANAKTTRNHNSSRF
GKYIQVRL
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mRNA from alignment at H-elongata_contig20549:564..4672-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20549.5860.1 ID=mRNA_H-elongata_contig20549.5860.1|Name=mRNA_H-elongata_contig20549.5860.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4109bp|location=Sequence derived from alignment at H-elongata_contig20549:564..4672- (Himanthalia elongata Himel1 dioecious)
CTCAAAAAGGTGTCGGAAGAGAGGGTTCAACGCGGAGACCCAACCTGCCT
CAAGGGCATCGAGGACATGGTCAAGATGGATATATTGACAGTTGGGTCCG
TCCTGCACAACCTAAGGTCAGTTAGTCGCCCTAACCCAAGGAACGTCGTT
ACTATTCCCGCCGTGACGAGGGCTTTGCCTTTTTTCTAAATTACAGCGGA
GGGAACGCTTTTGCAAATTCAAGTCTCGTTCAAGAACCCTTCGGAGAAAA
AAAAGGAAGGGGAGGTGGAAGGGTACAAGCTTTTGGTTAATGCTGGATTT
CGATCAGAGAATTTTCTCGCGAGATCCAGAGAATTTTCCCAAGCCTGTTG
TTGCTCGTGAAAAGCCCCAAGCTTGGTTGGTACAGTGTTTCCGTTCTCCA
GGATTTTCCCGGGGCCCCTGCTCTGGTTCGTGTCGCCGGGGTTCGATGCA
CGCCTTCTTCCCACCTCGAAACCTAACCTTTTTTCGATCCCGTGATTCTT
TTTTTGTGCCACCTCGTGACCGTTCTCCCTAGGAGGTATGGTCAATATAC
TAATGGACCATTGGTTGAACAGCGAAGGCATGCAAAACAAAACTTTAGTA
ACGACTCCCTCGTCTCGTTTTATTTTCCGTAGGACGCGATATGCCAGCCA
AAAAATCTACACCTCGGTAGGGTCGATCCTGGCGGCGATTAACCCTTACG
TGCGGATCCCGTCGCTTTATGACGAGGACTGCATGGAGCGGTACGCCAAC
ATGGCCACGGACGCCGGGGCGGCGCCTCACCCGTACGAGCTCATGGAGCT
CGCGTACAGGCAAGGGGAAAAGGGAGAGCGTGCGTCGGTCGCGCGTGTGA
ATCGAAGCTTGGTTGGTGGGTGGGGGGGGGGGGGGGGTGCGTTCCGGGAG
GAGGGGGGCAGCTAGGAATTGGNNNNNNNNNNGGGTGGGGGAGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGTGGTTGGGGTGGGGGGGG
GGGGGGGGGGGGGGGGGGGTAGTGCGTTCCGGTAGGAGGGGTGCAGCTAG
TAATTGGCCCTACCCTTCAACCCATCCCATGCGCACGAAATATTTAGTTC
TGAAGACGGCCCCGAGGGATGAGAGGGGTAAAAGGTTAGAACGGTGAGGT
GATACCGTTTCACAGATTTAAGGATTTGTTTGTTGGTGTAATGGAACTCT
TAGGGTTAGGGTTATTTCGGTTCGGCCGAGTCTGGACGTACCGTAACCGT
TGTCGCTTTGTTGCGCAGCCTATCGTTAAAAACGCCTCCTTTTGACGAGG
ATGTGGGTCGCATTTTTGTCGTTGGTTTTTTTTCTGGACGGTGACCTTTT
GCCGGAAGACTCTTTTGACATCAAGGTGGAAACGGTTGGATTTGGAGGTT
ACCGTTGTCAGTAGACATGGTTGGTGGTGTGCGAGATGTAACCGCCAACC
GCTTTTATCGAGAGCAGACCAATCAGATTAGACCAGACATCGAATCAACT
CCTAAAAACGCATGGATTTGGACCTCCGAGATGTTTTTCATTGCGGATGT
CCTACAGAGGACCCGCACCCGCACCCAAGAGATTTTTAAAAAGTACGGCT
GGTTTTGTGCATCATGTCACTTAGGATAGATATGACGCAAAGCTTATCTC
TAATCAGCAAATCTGCACATGGCCGTACTATGTACTTTACTACCCCCTGC
CCCCTTCCCCTTTCCACCAGCCTCTCCACCGTTTCCTCCTCCTCTGACCT
CTCTCTTCTCCGTTCGTCCTCGGCCTAACCCTAACCCGTCTCAGGGGACT
CATCGCGGACAATCGCAGCCAATCGGTGCTCATCAGCGGGGAATCGGGAG
CGGGGAAGACAGAGACGACCAAGTACCTGCTTTCGTACCTCTCTCATCGG
AGCAGCACCATGGAGAGGGAACGACGCGAGGCCGTACCCGAAATTCAGGC
AAAAAGCGTTGAGCTTGTTCATGGTCATGGTCCTTCTTGGTCATCTGGAA
TCCTCCCCTTGGTACGGTTGGTTGGTAGTGTCTCGCGCGGGTCTCGCGTG
TTGCGCGTGGAGGTTGGTGTCTTGTCTTCCCCAAGTGTTTTTCTTAAGAA
ATAGGTAGAGAGATAAGACAGCCCCTATAGGTATATACAGCAGGCGTTTT
TTATTCAGAAAAAAAAACTGAAATCTTCGTGCCGATTAGTTACTTCGGTA
TTTTCTATTTTCGTGATGAAGCGGGGAGTTAGGGTGTAAAGGCCCGTGAA
ATTGTGATGTATGCGTAGCAATGTGTTTTTTTTGTGCGTTTCACGCGAGG
GGGGTGGGTGAAAATCTCGTGGGTTTTGACGATTTTGTTTGTTGTTTTTT
TTTCGAAAAAAACGCTCGATGCCGGGCGCGTTTCAGGGTCGTTTTCTATT
TTTTTATTTTCTTCTCTTTGGCTGAACGGGGGGGGGGGGGCGGCATCATG
GGAGGGCGGAAGGGAGGGAAGGAGGGCGCGAGACTCGGCGGCATCATGGC
ATCCCACAGACGCCAAGCGATCGCACGGCTACCGCAGCTGCATTGCGTGC
TTTGGCCACTGCCGTCGGGACAAAACACGCGCTAAGGCTAAGGCTATTTA
CGGGACCGGGTCAACTATGGGGTGGTAACGTAGGAAACGCTCACGCAGGC
ATTGATAGTTGATTTTGGTTGGGGGGTTGGAAAGGTGGAGAGGCGTTTTA
CCTTGGAGATGTTAAAAAATGATTTGATTTGAGATTCGTTAAGGCTGGGT
CTTATCGGAATACAAAAATTTTAATTTCCAGTCGATTTAAATTAAAATCG
TACTCTGATTGGTTGAAATCTAAATAACGCCTAGCGTTTGTCCAATCAGA
GCCCGATTTAAATATATATCGGCTGGAAAATTATTTTTTTGTATTCCGAT
AAGACCTGGCCTAAGGAATGTTGAGAAATGTCCTCCGAAACAAATTATGA
TAGTTTCGAAGATATTACAGTATTAAATCATTTAAATCGTTTTAGATTGT
AGTCGTAACGAAAATATATTGTAGACGAATCATCTGCCACCCACACACTC
CCAGCAGTGTACGGCATGTTGCCCCCCCCCCCTTGCGAGGGTTCCTCTCC
AAGATCAAAGATCAAAATGAGTGGTACTTAGGGCGGGTATTAACGAGGTT
CCGAAAATTTTAATTCCTGCCGATTTAATTTAAATCGGGCTCTGCTTGGA
CGAAGGCTAGGCGTTATTTAGCTTTCGACCAATCAAAGCCCGATTGTAAT
TTAAATCGGCTGGAAATTAAAAATTTTCGAACCCCGTCAATAACCGCCCT
AACCCCTAGAGGAGAAAAGAGGCGTTATTACAGGCTATCGTTCTCCTGCC
TCTTGAAGAAAAGAAGATAGGGTACGTTTTTGTGCCTCGCGCGAAATTTC
GCTTTAATCGCGCTGCGCTTGTGGGTTGCCCGCACCCGGGCCAAATTTGG
ACGGCTTTGAGTTAGCGGGAGATGTCGCGTGTCCTTTCCTCAAACCTCTG
TTTTCCTTACGCTTCTGACTCAGATGTGTTTTATAAATTAAAATATTACA
ATCCCACCCACCCGCCATGCTCTTCCTCCCTAGGACGCGTAGTTCATAAT
CTAGCAAAACCAGAGTAGCCTCCCTTTCCCCGCCCCCCCAGAGATTGCTC
CCCTCTCCCCACCGATAACCTAAACCTAACCCTAACTCCCATCGATATCA
CTACAAAACCATACATCCTTCTATTGAGAAAGATATTCAACAAATTTGAA
TAATTGGCACAGTCAAAGCACCGACGTAAATCTATTTATATATAGAAAAT
AAGGGGGGTTTTTATAAAGTAAGTTTAGTCCCTGTTGTTATTCCCCCTCT
CCTTACCGGCCTCCGTTGGTTTTCCCGCCCCTGCCCCCTGTCCCCTGTCC
CCCTTTGGTGTTTTTGCATGGTGTTCGATGTGTTCGGTTCGGTTTCGATA
ACGTGGTTGTTTTAGGGGCGGCGGAACAGCATGGGCGGGCGGATCAGTGT
CGAGGAGAGTGTGGTGATGTCGAATCCGGTGATGGAAGCTTTTGCCAACG
CTAAGACCACGCGCAACCACAACTCCAGCCGCTTCGGGAAGTACATTCAG
GTGCGTTTG
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Coding sequence (CDS) from alignment at H-elongata_contig20549:564..4672-

>mRNA_H-elongata_contig20549.5860.1 ID=mRNA_H-elongata_contig20549.5860.1|Name=mRNA_H-elongata_contig20549.5860.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1248bp|location=Sequence derived from alignment at H-elongata_contig20549:564..4672- (Himanthalia elongata Himel1 dioecious)
CTCAAAAAGGTGTCGGAAGAGAGGGTTCAACGCGGAGACCCAACCTGCCT
CAAGGGCATCGAGGACATGGTCAAGATGGATATATTGACAGTTGGGTCCG
TCCTGCACAACCTAAGCTCAAAAAGGTGTCGGAAGAGAGGGTTCAACGCG
GAGACCCAACCTGCCTCAAGGGCATCGAGGACATGGTCAAGATGGATATA
TTGACAGTTGGGTCCGTCCTGCACAACCTAAGGACGCGATATGCCAGCCA
AAAAATCTACACCTCGGTAGGGTCGATCCTGGCGGCGATTAACCCTTACG
TGCGGATCCCGTCGCTTTATGACGAGGACTGCATGGAGCGGTACGCCAAC
ATGGCCACGGACGCCGGGGCGGCGCCTCACCCGTACGAGCTCATGGAGCT
CGCGTACAGGCAAGGGGAAAAGGGAGAGCGTGCGACGCGATATGCCAGCC
AAAAAATCTACACCTCGGTAGGGTCGATCCTGGCGGCGATTAACCCTTAC
GTGCGGATCCCGTCGCTTTATGACGAGGACTGCATGGAGCGGTACGCCAA
CATGGCCACGGACGCCGGGGCGGCGCCTCACCCGTACGAGCTCATGGAGC
TCGCGTACAGGCAAGGGGAAAAGGGAGAGCGTGCGGGACTCATCGCGGAC
AATCGCAGCCAATCGGTGCTCATCAGCGGGGAATCGGGAGCGGGGAAGAC
AGAGACGACCAAGTACCTGCTTTCGTACCTCTCTCATCGGAGCAGCACCA
TGGAGAGGGAACGACGCGAGGCCGTACCCGAAATTCAGGCAAAAAGCGGG
ACTCATCGCGGACAATCGCAGCCAATCGGTGCTCATCAGCGGGGAATCGG
GAGCGGGGAAGACAGAGACGACCAAGTACCTGCTTTCGTACCTCTCTCAT
CGGAGCAGCACCATGGAGAGGGAACGACGCGAGGCCGTACCCGAAATTCA
GGCAAAAAGCGGGCGGCGGAACAGCATGGGCGGGCGGATCAGTGTCGAGG
AGAGTGTGGTGATGTCGAATCCGGTGATGGAAGCTTTTGCCAACGCTAAG
ACCACGCGCAACCACAACTCCAGCCGCTTCGGGAAGTACATTCAGGTGCG
TTTGGGGCGGCGGAACAGCATGGGCGGGCGGATCAGTGTCGAGGAGAGTG
TGGTGATGTCGAATCCGGTGATGGAAGCTTTTGCCAACGCTAAGACCACG
CGCAACCACAACTCCAGCCGCTTCGGGAAGTACATTCAGGTGCGTTTG
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