mRNA_H-elongata_contig205017.5845.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: D7FP46_ECTSI (SOR_SNZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP46_ECTSI) HSP 1 Score: 173 bits (439), Expect = 1.090e-51 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 1
Query: 13 INTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMV 303
+ +ARIGHFVEAQILE+IEVDYIDESEVLTMADEDNHINKRKF VPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRH R +Q+EIRMV
Sbjct: 72 VMAKARIGHFVEAQILESIEVDYIDESEVLTMADEDNHINKRKFQVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVQKEIRMV 168
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A7S4E4M7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4M7_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.380e-50 Identity = 86/101 (85.15%), Postives = 95/101 (94.06%), Query Frame = 1
Query: 1 TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMV 303
T PV+ +ARIGHFVEAQ+LEA EVDYIDESEVLTMADEDNHINK KFTVPFVCGCRNLGEALRRVAEGA+MLRTKGEAGTGNVVEAVRH RT+Q++I+M+
Sbjct: 85 TIPVM-AKARIGHFVEAQVLEAAEVDYIDESEVLTMADEDNHINKNKFTVPFVCGCRNLGEALRRVAEGASMLRTKGEAGTGNVVEAVRHARTVQKQIKML 184
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A7S3ZPL8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPL8_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.490e-50 Identity = 86/101 (85.15%), Postives = 95/101 (94.06%), Query Frame = 1
Query: 1 TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMV 303
T PV+ +ARIGHFVEAQ+LEA EVDYIDESEVLTMADEDNHINK KFTVPFVCGCRNLGEALRRVAEGA+MLRTKGEAGTGNVVEAVRH RT+Q++I+M+
Sbjct: 88 TIPVM-AKARIGHFVEAQVLEAAEVDYIDESEVLTMADEDNHINKNKFTVPFVCGCRNLGEALRRVAEGASMLRTKGEAGTGNVVEAVRHARTVQKQIKML 187
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A835YLJ1_9STRA (SOR/SNZ family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ1_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.610e-50 Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1
Query: 13 INTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMV 303
+ +ARIGHFVEAQILEAIE+DYIDESEVLTMADEDNHINK KF VPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRH R +Q+E+RMV
Sbjct: 96 VMAKARIGHFVEAQILEAIEIDYIDESEVLTMADEDNHINKNKFKVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARQVQKELRMV 192
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A4D9CVF0_9STRA (SOR_SNZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVF0_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.920e-50 Identity = 88/102 (86.27%), Postives = 94/102 (92.16%), Query Frame = 1
Query: 1 TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMVR 306
T PV+ +ARIGHFVEAQILE IEVDYIDESEVLTMADEDNHINK KF VPFVCGCR+LGEALRRVAEGAAMLRTKGEAGTGNVVEAVRH RT+QREIR ++
Sbjct: 96 TIPVM-AKARIGHFVEAQILETIEVDYIDESEVLTMADEDNHINKNKFKVPFVCGCRDLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARTVQREIRRLK 196
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: H3HAP6_PHYRM (SOR_SNZ domain-containing protein n=18 Tax=Oomycota TaxID=4762 RepID=H3HAP6_PHYRM) HSP 1 Score: 166 bits (420), Expect = 5.900e-49 Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 1
Query: 1 TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIR 297
T PV+ + RIGHFVEAQILEAIE+DYIDESEVLTMADE+NHINK KF VPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRH R + REIR
Sbjct: 80 TIPVM-AKVRIGHFVEAQILEAIEIDYIDESEVLTMADEENHINKHKFKVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVHREIR 177
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A067CXT4_SAPPC (Pyridoxal biosynthesis lyase pdxS n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXT4_SAPPC) HSP 1 Score: 166 bits (420), Expect = 6.550e-49 Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 1
Query: 1 TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIR 297
T PV+ + RIGHFVEAQILEA+E+DYIDESEVLTMADE+NHINK KF VPFVCGCRNLGEALRR+AEGAAMLRTKGEAGTGNVVEAVRH R +QREI+
Sbjct: 84 TIPVM-AKVRIGHFVEAQILEAVEIDYIDESEVLTMADEENHINKHKFKVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARAVQREIK 181
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A7S2SJ12_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ12_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.830e-48 Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 1
Query: 1 TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMVR 306
T PV+ +ARIGHFVEAQILE+IEVDYIDESEVLTMADE+NHINK KF VPFVCGCRNLGEALRRVAEG AMLRTKGEAGTGNVVEAVRH R + REIR ++
Sbjct: 80 TIPVM-AKARIGHFVEAQILESIEVDYIDESEVLTMADEENHINKTKFKVPFVCGCRNLGEALRRVAEGCAMLRTKGEAGTGNVVEAVRHARAVHREIRRLK 180
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A6U4HS33_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HS33_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.290e-48 Identity = 81/97 (83.51%), Postives = 89/97 (91.75%), Query Frame = 1
Query: 13 INTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIRMV 303
+ +ARIGHFVEAQILE++E+DYIDESEVLTMADE+NHINK KF VPFVCGCRNLGEALRR+AEGAAMLRTKGEAGTGNVVEAVRH R + REIR V
Sbjct: 90 VMAKARIGHFVEAQILESLEIDYIDESEVLTMADEENHINKNKFQVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAVRHARAVNREIRKV 186
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Match: A0A2R5GB55_9STRA (Pyridoxal 5'-phosphate synthase subunit PDX1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GB55_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.760e-48 Identity = 80/95 (84.21%), Postives = 89/95 (93.68%), Query Frame = 1
Query: 13 INTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHGRTLQREIR 297
+ +ARIGHFVEAQILEAIE+DYIDESEVLTMADE+NHINKR F VPFVCGCRNLGEALRR+ EGAAMLRTKGEAGTGN+VEAVRH R++QRE+R
Sbjct: 78 VMAKARIGHFVEAQILEAIEIDYIDESEVLTMADEENHINKRNFKVPFVCGCRNLGEALRRIQEGAAMLRTKGEAGTGNIVEAVRHQRSVQRELR 172 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig205017.5845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig205017.5845.1 >prot_H-elongata_contig205017.5845.1 ID=prot_H-elongata_contig205017.5845.1|Name=mRNA_H-elongata_contig205017.5845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp TTPVINTQARIGHFVEAQILEAIEVDYIDESEVLTMADEDNHINKRKFTVback to top mRNA from alignment at H-elongata_contig205017:88..760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig205017.5845.1 ID=mRNA_H-elongata_contig205017.5845.1|Name=mRNA_H-elongata_contig205017.5845.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=673bp|location=Sequence derived from alignment at H-elongata_contig205017:88..760- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig205017:88..760- >mRNA_H-elongata_contig205017.5845.1 ID=mRNA_H-elongata_contig205017.5845.1|Name=mRNA_H-elongata_contig205017.5845.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at H-elongata_contig205017:88..760- (Himanthalia elongata Himel1 dioecious)back to top |