mRNA_H-elongata_contig203540.5784.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: D7FLS6_ECTSI (Polynucleotide kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLS6_ECTSI) HSP 1 Score: 125 bits (315), Expect = 6.410e-32 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPKDGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLHRDR 237
R+PRPGCWE++S+ NGGLDV ACLYVGDAAGRPK G KKDFSAGDLKLA+N +PFQTPEQFF ST LH++R
Sbjct: 376 RKPRPGCWEMVSTSYNGGLDVEKAACLYVGDAAGRPKQGTHKKDFSAGDLKLALNAKIPFQTPEQFFMRSTVPLHKNR 453
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: A0A7S2Y1Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1Q1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.600e-20 Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 79 CLYVGDAAGRPKDGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLHRDR 237
C YVGDAAGRP +G RKKDFSAGDLK A+N+G+ F TPE+FF GSTQ LH R
Sbjct: 4 CFYVGDAAGRPAEGKRKKDFSAGDLKFALNLGIRFYTPEEFFLGSTQSLHCSR 56
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: A0A7S4PTE1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PTE1_9DINO) HSP 1 Score: 91.7 bits (226), Expect = 5.220e-20 Identity = 42/77 (54.55%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPKDGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLHRD 234
R+P P W+L+SS NGG+ V E Y GDAAGR +KKDFSA DLK A+NVGVPF TPE+FF G Q ++
Sbjct: 158 RKPLPASWKLMSSRFNGGVAVSVERSFYCGDAAGRVPPVVKKKDFSASDLKFALNVGVPFHTPEEFFLGKAQAYQKE 234
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: A0A1R2C5Y8_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C5Y8_9CILI) HSP 1 Score: 86.7 bits (213), Expect = 3.280e-18 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPKDGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRL 225
R+P G W+ + NGG++V Y+GDAAGRP G RKKDF+ DLK A+N+G+PF+TPE+FF G + +
Sbjct: 145 RKPCTGMWDYFTKNLNGGINVDFSVSKYIGDAAGRPASGSRKKDFNDTDLKYALNIGIPFETPEKFFLGERENI 218
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: A0A1V9ZVQ6_9STRA (Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVQ6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.150e-17 Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 1 SRQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPK-DGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLHRD 234
+R+PR G WE + S +D+ + Y GDAAGRPK G KKDFSAGD K A+N+G+ F+TPEQFF GS Q +H D
Sbjct: 260 NRKPRTGAWEFMVSHFKMNVDMTSS--FYCGDAAGRPKAPGKPKKDFSAGDYKFALNLGIIFKTPEQFFLGSKQSIHCD 336
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: A0A6C0EA69_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EA69_9ZZZZ) HSP 1 Score: 84.7 bits (208), Expect = 1.620e-17 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPKDGPRKKDFSAGDLKLAINVGVPFQTPEQFF 204
R+P G W+ L + NG + V C++VGDAAGRPK G K DFS D K+AIN G+ FQTPEQFF
Sbjct: 119 RKPLTGMWDYLCNNLNGNVKVDKNQCIFVGDAAGRPKQGKNKADFSDSDFKMAINAGIEFQTPEQFF 185
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: A0A485L0I8_9STRA (Aste57867_14265 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0I8_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.450e-17 Identity = 42/79 (53.16%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPK-DGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLHRDR 237
R+PR G WE ++ + LDV T Y GDAAGRPK G KKDFS GD K A+N+G+ F TPE+FF GS Q LH ++
Sbjct: 158 RKPRVGAWEFMAR--HCQLDVDTANSFYCGDAAGRPKAPGKAKKDFSCGDYKFALNLGITFYTPEKFFLGSKQSLHSNK 234
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: T0QN25_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QN25_SAPDV) HSP 1 Score: 84.0 bits (206), Expect = 3.990e-17 Identity = 44/79 (55.70%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 SRQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPK-DGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLHRD 234
+R+PR G W+++ S N LDV Y GDAAGRPK G KKDFSAGD K A+N+GVPF TPEQ F S LH D
Sbjct: 252 NRKPRTGAWDVMVSEFN--LDVDMTNSFYCGDAAGRPKATGKAKKDFSAGDYKFALNLGVPFWTPEQLFLNSKLSLHCD 328
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: W4GG15_9STRA (Polynucleotide kinase 3'-phosphatase, variant 3 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GG15_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.190e-17 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPK-DGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLH 228
R+PR G W+LL +D+ L+V Y GDAAGRPK G KKDFS D K A+NVGVPF TPE+ F ST LH
Sbjct: 36 RKPRTGAWKLL--LDHCSLNVDAATSFYCGDAAGRPKAPGKPKKDFSCADYKFALNVGVPFHTPERLFLQSTLSLH 109
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Match: W4GGB4_9STRA (Polynucleotide kinase 3'-phosphatase, variant 2 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGB4_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.370e-17 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 4 RQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPK-DGPRKKDFSAGDLKLAINVGVPFQTPEQFFSGSTQRLH 228
R+PR G W+LL +D+ L+V Y GDAAGRPK G KKDFS D K A+NVGVPF TPE+ F ST LH
Sbjct: 166 RKPRTGAWKLL--LDHCSLNVDAATSFYCGDAAGRPKAPGKPKKDFSCADYKFALNVGVPFHTPERLFLQSTLSLH 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig203540.5784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig203540.5784.1 >prot_H-elongata_contig203540.5784.1 ID=prot_H-elongata_contig203540.5784.1|Name=mRNA_H-elongata_contig203540.5784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp SRQPRPGCWELLSSIDNGGLDVLTEACLYVGDAAGRPKDGPRKKDFSAGDback to top mRNA from alignment at H-elongata_contig203540:171..410+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig203540.5784.1 ID=mRNA_H-elongata_contig203540.5784.1|Name=mRNA_H-elongata_contig203540.5784.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=240bp|location=Sequence derived from alignment at H-elongata_contig203540:171..410+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig203540:171..410+ >mRNA_H-elongata_contig203540.5784.1 ID=mRNA_H-elongata_contig203540.5784.1|Name=mRNA_H-elongata_contig203540.5784.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig203540:171..410+ (Himanthalia elongata Himel1 dioecious)back to top |