mRNA_H-elongata_contig20316.5765.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: D8LTX8_ECTSI (MyTH4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTX8_ECTSI) HSP 1 Score: 143 bits (360), Expect = 2.090e-39 Identity = 69/132 (52.27%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 1 MALEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDENIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
MALEP+AR+ YN RKG+ G KRTP++ LLSWK + I PLT AC + + E + F IM YMGD+ A++ + ++K L RL+ ++E+ DE+ CQVCKQTT NP NSD+RGW+L+LSILAV PS
Sbjct: 136 MALEPYAREMYNTVRKGLLGK-KRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPS 266
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: A0A7S4A7X3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7X3_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 5.040e-20 Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 16 FARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDENIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
FA+ H+ + RKG+F RT + + WK + L +C DA+L E+L R + GYMGDR + L +L++ +E DEV+CQ+ KQTTLNP S IRGW LLLS+L+ PS
Sbjct: 306 FAKAHFQMHRKGLF--KARTELDKICRWKRATMKLALLESCCRDADLLAEALQAHRNVTGYMGDRSSSKNKDGHRTKLIGQLLRCKQELRDEVYCQLVKQTTLNPSSESAIRGWELLLSVLSTCPPS 430
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: A0A7S3JVL0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVL0_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.940e-16 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 1
Query: 16 FARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDENIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLP 393
FA H+ L RKG+F +T + +L WKS I T L +D EL E++ TFR I GYMGDR + +I L + +++ EE +E +CQ+ KQ T NP + S +GW+L+ LA P
Sbjct: 185 FAEAHFQLHRKGMF--KSKTDLDKILRWKSDLIKTALLNF--KDTELAAEAVQTFRNITGYMGDRGSGKASIEHCTKLLSNMLQSPEELRNEAYCQLIKQLTENPSLESCTKGWQLMCVFLATFPP 306
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: W8ANT9_CERCA (Rho GTPase-activating protein 39 n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8ANT9_CERCA) HSP 1 Score: 79.7 bits (195), Expect = 4.100e-15 Identity = 48/135 (35.56%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKE--DAELGVESLITFRIIMGYMGDRLAQDE---NIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E FA D+ NL KGIF K++ ++ +LSW +PI P+ ++ D + +E F+++ YMGDR A+ N +++ + A L + ++ DE++ Q+C+QTT NP+ +S IRGW L+ L+ V PS
Sbjct: 45 IEKFAADNLNLHSKGIF--RKKSSVRDMLSWTPEPISRPMLALSRDKTDKKTAIE---LFKLVQIYMGDRKARPGMSLNSVVIDIIVAALPQ--QQLRDELYVQLCRQTTENPKRDSLIRGWELMAICLSFVPPS 172
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: A0A7F5RC37_AGRPL (rho GTPase-activating protein 39 n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A7F5RC37_AGRPL) HSP 1 Score: 79.7 bits (195), Expect = 8.820e-15 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDE---NIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E FA D+ NL +G+F ++T ++ LLSW S+ + PL + K L ++L FR + YMGDR A+ N ++++ + L DE+F Q+CKQTT NPR S +RGW LL LA + PS
Sbjct: 250 MEKFAADNLNLGGRGLF--RRKTSVRELLSWTSRGLTRPLLASSKP---LAKQALDMFRQVQMYMGDRKARPGTSLNSLLVEIIN--LAHAQPVLRDELFVQLCKQTTENPRRESLVRGWELLTITLAFIPPS 375
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: A0A811TWD6_CERCA ((Mediterranean fruit fly) hypothetical protein n=5 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811TWD6_CERCA) HSP 1 Score: 79.7 bits (195), Expect = 9.460e-15 Identity = 48/135 (35.56%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKE--DAELGVESLITFRIIMGYMGDRLAQDE---NIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E FA D+ NL KGIF K++ ++ +LSW +PI P+ ++ D + +E F+++ YMGDR A+ N +++ + A L + ++ DE++ Q+C+QTT NP+ +S IRGW L+ L+ V PS
Sbjct: 1060 IEKFAADNLNLHSKGIF--RKKSSVRDMLSWTPEPISRPMLALSRDKTDKKTAIE---LFKLVQIYMGDRKARPGMSLNSVVIDIIVAALPQ--QQLRDELYVQLCRQTTENPKRDSLIRGWELMAICLSFVPPS 1187
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: UPI001AE2CA97 (rho GTPase-activating protein 39-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE2CA97) HSP 1 Score: 79.0 bits (193), Expect = 1.700e-14 Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDE---NIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E +A+D+ N+ ++G+F ++ +K +LSW S+ I PLT C + E++ F++I YMGDR A+ N + L + ++ + DE+F Q+CKQTT NPR S RGW LL LA PS
Sbjct: 493 IEKYAQDNMNIQKRGLF--RRKMTVKDILSWTSEGISKPLT--CLSEKGSKKEAIELFKLIQIYMGDRKAKAGMTINSVALDVTTSGYLRSTLR--DEIFVQLCKQTTENPRKESLRRGWELLAICLACFPPS 619
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: UPI001C921242 (rho GTPase-activating protein 39-like isoform X1 n=4 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C921242) HSP 1 Score: 79.0 bits (193), Expect = 1.720e-14 Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDENIIILKGLQARLMKGSEEYI-DEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E +A+D+ NL ++GIF K+ ++ +LSW PI P+ C D L ++ +++I YMGDR A+ + G + + S+ + DE++ QVC+QTT NPR +S RGW LL L PS
Sbjct: 663 IEKYAKDNLNLHKRGIF--RKKNTVRDMLSWSKDPISQPMI--CTLDKALKKDACEVYKLIQIYMGDRKAKPGMTLNSVGAELAGLGWSKPGLRDEIYVQVCRQTTENPRRDSLRRGWELLAICLQFFPPS 789
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: UPI001ED89043 (uncharacterized protein LOC124172941 isoform X1 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89043) HSP 1 Score: 79.0 bits (193), Expect = 1.730e-14 Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAELGVESLITFRIIMGYMGDRLAQDENIIILKGLQARLMKGSEEYI-DEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E +A+D+ N+ +KGIF K+ ++ +LSW PI P+ ED L E+ F+++ YMGDR A+ + L S+ + DE++ Q+C+QTT NPR S RGW LL LA PS
Sbjct: 737 IEKYAQDNLNIHKKGIF--RKKFSVRDMLSWSKDPIRKPMLVL--EDKNLKKEACEVFKLVQIYMGDRKAKPGMTLNSVALDLCSKAYSQPRLRDELYVQICRQTTENPRRESLRRGWELLALCLAFFPPS 863
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Match: A0A1B0BKM6_9MUSC (Uncharacterized protein n=5 Tax=Glossina TaxID=7393 RepID=A0A1B0BKM6_9MUSC) HSP 1 Score: 79.0 bits (193), Expect = 1.750e-14 Identity = 49/135 (36.30%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 7 LEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTAC--KEDAELGVESLITFRIIMGYMGDRLAQ---DENIIILKGLQARLMKGSEEYIDEVFCQVCKQTTLNPRVNSDIRGWRLLLSILAVVLPS 396
+E FA D+ NL KGIF K++ ++ +LSW S+ I P+ K D ++ +E F+++ YMGDR A+ N + + + A L + ++ DE++ Q+C+QTT NP+ S IRGW L+ L+ V PS
Sbjct: 1045 IEKFAADNLNLHSKGIF--RKKSSVRDMLSWTSEAISRPMLALSRDKNDKKIAIE---LFKLVQIYMGDRKARAGMSLNSVAIDVITAALPQ--QQLRDELYVQLCRQTTENPKRESLIRGWELMAICLSFVPPS 1172 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20316.5765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20316.5765.1 >prot_H-elongata_contig20316.5765.1 ID=prot_H-elongata_contig20316.5765.1|Name=mRNA_H-elongata_contig20316.5765.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=132bp MALEPFARDHYNLTRKGIFGMTKRTPIKGLLSWKSQPIMTPLTTACKEDAback to top mRNA from alignment at H-elongata_contig20316:2029..2902+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20316.5765.1 ID=mRNA_H-elongata_contig20316.5765.1|Name=mRNA_H-elongata_contig20316.5765.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=874bp|location=Sequence derived from alignment at H-elongata_contig20316:2029..2902+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20316:2029..2902+ >mRNA_H-elongata_contig20316.5765.1 ID=mRNA_H-elongata_contig20316.5765.1|Name=mRNA_H-elongata_contig20316.5765.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=792bp|location=Sequence derived from alignment at H-elongata_contig20316:2029..2902+ (Himanthalia elongata Himel1 dioecious)back to top |