mRNA_H-elongata_contig20266.5744.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20266.5744.1
Unique NamemRNA_H-elongata_contig20266.5744.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: D7FRA3_ECTSI (Beta-glucosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA3_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 1.870e-157
Identity = 206/266 (77.44%), Postives = 237/266 (89.10%), Query Frame = 1
Query:    1 CSYPIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            C    RV+N D+GDLACDH+TLY+EDVKIMK++GLK+YRLSIAMPRIFPGG+GPANE+GI+FYN LIDCLL AGITP +TLYHWDLP ELE E+GGWQ+ ITVERF+EYAEVCFERFGDRVK+WLTFNEPWC+AVLGYGNGE APG TS+DA +VYRAGH+ML+ HARAV+IYR KF+  Q+GVIG+TLN NWTEPK SDDPE A+ NAEAAER +LWN+GWFADPVY GDYP+VM+ RCGDRLPEFT  EK +LKGS+DFFG NH
Sbjct:   37 CKTEGRVVNGDNGDLACDHFTLYKEDVKIMKDMGLKNYRLSIAMPRIFPGGQGPANEEGIAFYNGLIDCLLDAGITPCVTLYHWDLPLELEMEHGGWQNYITVERFLEYAEVCFERFGDRVKSWLTFNEPWCAAVLGYGNGEMAPGCTSSDAVKVYRAGHHMLLGHARAVEIYRKKFRTAQNGVIGVTLNCNWTEPKPSDDPETAKLNAEAAERSVLWNLGWFADPVYKGDYPEVMRNRCGDRLPEFTADEKALLKGSSDFFGLNH 302          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: M4BK81_HYAAE (Beta-glucosidase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BK81_HYAAE)

HSP 1 Score: 371 bits (952), Expect = 4.060e-124
Identity = 173/270 (64.07%), Postives = 205/270 (75.93%), Query Frame = 1
Query:    1 CSYPIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNHCEL 807
            C  P +VIN+D+GD A DHY  Y+EDV++MK++GL  YR SIA PRI PGG G  NE+G++FYN LI+ LL+  ITP +TLYHWDLP  L+ EY GW   +   E F +YA VCF+RFGDRVKNWLT NEPWCSA LGYG G HAPGR     TE Y AGHN+L+AHARAV+ YRN+FQ  Q GVIGITLN +W EPK +DD  +  RN EAAER +L+++GWFADPVY GDYP VMK RCG RLPEFT+ EKT+LKGS+DFFG NH  L
Sbjct:   40 CRTPNKVINNDTGDKAVDHYHRYKEDVQLMKKMGLHAYRFSIAWPRILPGGIGNVNEEGVAFYNNLINELLANNITPIVTLYHWDLPLPLQIEYDGWLGGKFIQEAFTQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGTGSHAPGRKCKPQTEAYLAGHNLLLAHARAVEAYRNEFQAAQMGVIGITLNCDWREPKPTDDSVQKARNKEAAERSLLFHLGWFADPVYAGDYPQVMKDRCGLRLPEFTDDEKTLLKGSSDFFGLNHYGL 309          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A3M6VFE5_9STRA (Beta-glucosidase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFE5_9STRA)

HSP 1 Score: 364 bits (934), Expect = 2.150e-121
Identity = 169/267 (63.30%), Postives = 204/267 (76.40%), Query Frame = 1
Query:   10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITV-ERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNHCEL 807
            P +V+N D+GD A DHY LY++DV++MK++GL+ YRLSIA PRI P G G  NE+G+ FYN LI+ LL   I P +TLYHWDLP  L+TEY GW     + E F +YA VCF+RFGDRVKNWLT NEPWC+A LGYGNG HAPGR S   TE Y AGHNML+AHARAV+ YRN+FQ  Q G IGITLN +W EP  ++DP +  +N EAAER +L+++GWFADPVY GDYP VMK RCG RLP+FTE+EK +LKGS+DFFG NH  L
Sbjct:   43 PGKVVNGDTGDKAVDHYHLYKQDVQLMKKMGLQAYRLSIAWPRIIPAGIGKVNEEGVEFYNNLINELLDNDIIPLVTLYHWDLPLALQTEYDGWLGNTFIQEAFTQYARVCFQRFGDRVKNWLTLNEPWCAAFLGYGNGIHAPGRKSKPQTEAYLAGHNMLLAHARAVEAYRNEFQAVQKGRIGITLNCDWREPAPTEDPVQKVKNEEAAERSLLFSLGWFADPVYKGDYPQVMKDRCGLRLPKFTEEEKKLLKGSSDFFGLNHYGL 309          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A835Z9S9_9STRA (Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S9_9STRA)

HSP 1 Score: 365 bits (936), Expect = 2.980e-121
Identity = 162/256 (63.28%), Postives = 196/256 (76.56%), Query Frame = 1
Query:   31 DSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            D+GD+ACDH+  Y+EDVK+M+ LGLK+YR SI+ PRI P G+GPAN +G++FY+ LIDCLL+ GITP +TLYHWDLP  LETE+GGW     V  F EYA +CF  FGDRVK WLTFNEPWC+ VLGYG GEHAPG TSAD  +VY +GH+ L+AHA AVD+YR +FQ  Q G IGITLN NW EP A  D   A  + +AAER  LW +GWFADP++ GDYP+ M+ RCG RLP FTE+EK +LKGS+DF G NH
Sbjct:   71 DTGDVACDHFHRYQEDVKLMQSLGLKNYRFSISWPRIQPTGRGPANAEGVAFYHALIDCLLAHGITPLVTLYHWDLPQALETEHGGWLGREVVPAFEEYARLCFAAFGDRVKTWLTFNEPWCTCVLGYGTGEHAPGATSADGAKVYLSGHHCLLAHAAAVDVYRREFQPAQRGAIGITLNANWNEPLAHSDVAIAANHRDAAERMTLWALGWFADPIWKGDYPEEMRARCGPRLPSFTEEEKVLLKGSSDFLGLNH 326          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: D0NSJ8_PHYIT (Beta-glucosidase n=16 Tax=Phytophthora TaxID=4783 RepID=D0NSJ8_PHYIT)

HSP 1 Score: 363 bits (932), Expect = 4.050e-121
Identity = 169/264 (64.02%), Postives = 202/264 (76.52%), Query Frame = 1
Query:   10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            P +++N D+G+ A DHY  Y+EDV++MK++GLK YRLSIA PRI P G G  NE+G+ FYN LI+ LL+  ITP +TLYHWDLP  L+TEY GW    +  + FV+YA VCF+RFGDRV NWLT NEPWCSA LGYGNG HAPGR     TEVY AGHN+L+AHARAV+ YRN+FQ  Q G IGITLN +W EP A+DDP +  +N EAAER +L+ +GWFADPVY GDYP VMK RCG RLP FTE EK +LKGS+DFFG NH
Sbjct:   43 PGKIVNGDTGEKAVDHYHRYKEDVQLMKKMGLKAYRLSIAWPRIIPAGVGAVNEEGVEFYNNLINELLANDITPLVTLYHWDLPLALQTEYDGWLGGRVIQDAFVQYARVCFQRFGDRVTNWLTLNEPWCSAFLGYGNGVHAPGRKWKPHTEVYLAGHNLLLAHARAVEAYRNEFQATQKGRIGITLNCDWREPAATDDPVQKAKNEEAAERSLLFFLGWFADPVYKGDYPQVMKDRCGLRLPTFTEDEKKLLKGSSDFFGLNH 306          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A662XAV5_9STRA (Beta-glucosidase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XAV5_9STRA)

HSP 1 Score: 362 bits (929), Expect = 1.620e-119
Identity = 165/264 (62.50%), Postives = 204/264 (77.27%), Query Frame = 1
Query:   10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            P ++++ D+G  A DH+  Y+EDV++MK +GLK YR+SIA PRI P G G  NE+G+ FYNRLID LL+ GITP +TLYHWDLP  L+TE+ GW   +   + F +YA VCF+RFGDRVKNWLT NEPWCSA LG+GNG HAPGR     TEVY AGHN+L+AHARAV++YRN+FQ  Q G IGITLN +W EP  ++DPE+  +N EA+ER +L+ +GWFADPVY GDYP VMK RCG RLP+FTE EK +LKGS+DFFG NH
Sbjct:  129 PGKIVHGDTGAQAVDHFHRYKEDVQLMKNMGLKAYRMSIAWPRIIPAGVGKVNEEGVDFYNRLIDELLANGITPLVTLYHWDLPLPLQTEFDGWLGGKFIQDAFAQYARVCFQRFGDRVKNWLTLNEPWCSAFLGFGNGVHAPGRKHKPQTEVYIAGHNLLLAHARAVEVYRNEFQAVQKGKIGITLNCDWREPAPTNDPEQHAKNVEASERSLLFFLGWFADPVYLGDYPQVMKDRCGLRLPKFTEDEKKLLKGSSDFFGLNH 392          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A0P1B4X8_PLAHL (Beta-glucosidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4X8_PLAHL)

HSP 1 Score: 358 bits (919), Expect = 3.740e-119
Identity = 165/264 (62.50%), Postives = 203/264 (76.89%), Query Frame = 1
Query:   10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            P +V+N D+G+ A DHY LY+EDV++MK++GLK YRLS+A PRI P G G  NE+GI FY+ LI+ LL+  ITP +TLYHWDLP  L+ EY GW       + F +YA VCF+RFGDRVKNWLT NEPWCSA LGYGNG HAPGR     +E Y +GHN+L+AHARAVD YR++FQ  Q+G IGITLN +W EPK +DDP +  +N EAAER +L+++GWFADPVY GDYP VMK RCG RLP FT++EK +LKGS+DFFG NH
Sbjct:   43 PGKVVNGDTGEKAVDHYHLYKEDVELMKKMGLKFYRLSLAWPRIIPAGVGKVNEEGIEFYDNLINELLANDITPLVTLYHWDLPLALQIEYDGWLGGRFIQDAFTQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGNGVHAPGRKCNPQSEAYISGHNLLLAHARAVDAYRHEFQAVQNGRIGITLNCDWREPKPTDDPLEKAKNEEAAERSLLFSLGWFADPVYRGDYPQVMKDRCGLRLPRFTDEEKKLLKGSSDFFGLNH 306          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A836C8J0_9STRA (Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J0_9STRA)

HSP 1 Score: 360 bits (924), Expect = 6.850e-119
Identity = 158/256 (61.72%), Postives = 197/256 (76.95%), Query Frame = 1
Query:   31 DSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            D+GD+AC H+  YEEDVK+M++LG K+YRLSI+  RI P G+GP N +G++FYN LI+CLL+ G+ P +TLYHWDLP  LE E GGWQS      F +YA +CFE FGDRVKNWLTFNEPWC  +LGYG GEHAPG T  D T+VY A HN+L AHA AVD+YR +++  Q GVIGITLN NW EP    DP  A+RNA+AA R ++W++GWFADP++ GDYP  M++RCGDRLP FT++EK +LKGS+DF G NH
Sbjct:   80 DNGDVACGHFFKYEEDVKLMQKLGFKNYRLSISWSRIQPTGRGPINAEGVAFYNDLINCLLAHGVEPLITLYHWDLPQALEDELGGWQSREIAPIFCDYARLCFELFGDRVKNWLTFNEPWCVCLLGYGTGEHAPGITCDDGTKVYMAAHNVLRAHAAAVDVYRREYKAQQGGVIGITLNCNWNEPVPDRDPAAAQRNADAAHRILMWSLGWFADPIWRGDYPPEMRERCGDRLPTFTDEEKALLKGSSDFLGLNH 335          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A8K1CEM5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEM5_PYTOL)

HSP 1 Score: 355 bits (912), Expect = 3.900e-118
Identity = 165/270 (61.11%), Postives = 199/270 (73.70%), Query Frame = 1
Query:   10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNHCELFHS 816
            P +VIN D+G  A DHY  Y+EDV+ MK +GLK+YR SIA PRI P G G  NE+G++FYN LI+ LL+ GI P +TLYHWDLP  L+TEY GW   E     FVEYA VCF+RFGDRVK WLTFNEP+C+    YG G HAPGR    +TE Y A HNML+AHA+AVD+YR +FQ  Q+G +GITL   W EP A+ DP++ +RNAEAAER +L+ VGWFADPVY GDYP VMK  CGDRLP FT+ EK +LKGS+DFFG NH   F++
Sbjct:   43 PGKVINMDTGARADDHYHRYKEDVQHMKSMGLKNYRFSIAWPRIIPAGVGAVNEEGVAFYNNLINELLANGIEPLITLYHWDLPLALQTEYDGWLGGEFIQNAFVEYARVCFDRFGDRVKRWLTFNEPYCATYFSYGTGIHAPGRKHKGSTEAYIAAHNMLLAHAKAVDLYRKEFQPRQNGAVGITLVSEWREPAAATDPQEQKRNAEAAERAVLFMVGWFADPVYLGDYPQVMKDCCGDRLPSFTDDEKKLLKGSSDFFGLNHYSTFYT 312          
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A835YNG2_9STRA (Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG2_9STRA)

HSP 1 Score: 358 bits (918), Expect = 5.030e-118
Identity = 156/256 (60.94%), Postives = 197/256 (76.95%), Query Frame = 1
Query:   31 DSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
            D+GD+AC H+  YEEDVK+M++LG K+YRLSI+  RI P G+GP N +G++FYN LI+CLL+ G+ P +TLYHWDLP  LE E GGWQ+      F +YA +CFE FGDRVKNWLTFNEPWC  +LGYG GEHAPG T  D ++VY A HN+L AHA AVDIYR +++  Q GVIGITLN NW EP    DP  A+RNA+AA R ++W++GWFADP++ G+YP  M++RCGDRLP FT++EK +LKGS+DF G NH
Sbjct:   80 DNGDVACGHFFKYEEDVKLMQQLGFKNYRLSISWSRIQPTGRGPINAEGVAFYNDLINCLLAHGVEPLITLYHWDLPQALEDELGGWQNREIAPTFCDYARLCFELFGDRVKNWLTFNEPWCVCLLGYGTGEHAPGITCDDGSKVYMAAHNVLRAHAAAVDIYRREYKAQQGGVIGITLNCNWNEPVPDKDPAAAQRNADAAHRILMWSLGWFADPIWRGEYPPEMRQRCGDRLPAFTDEEKALLKGSSDFLGLNH 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA3_ECTSI1.870e-15777.44Beta-glucosidase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
M4BK81_HYAAE4.060e-12464.07Beta-glucosidase n=1 Tax=Hyaloperonospora arabidop... [more]
A0A3M6VFE5_9STRA2.150e-12163.30Beta-glucosidase n=1 Tax=Peronospora effusa TaxID=... [more]
A0A835Z9S9_9STRA2.980e-12163.28Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303... [more]
D0NSJ8_PHYIT4.050e-12164.02Beta-glucosidase n=16 Tax=Phytophthora TaxID=4783 ... [more]
A0A662XAV5_9STRA1.620e-11962.50Beta-glucosidase n=2 Tax=Nothophytophthora sp. Chi... [more]
A0A0P1B4X8_PLAHL3.740e-11962.50Beta-glucosidase n=1 Tax=Plasmopara halstedii TaxI... [more]
A0A836C8J0_9STRA6.850e-11961.72Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A8K1CEM5_PYTOL3.900e-11861.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835YNG2_9STRA5.030e-11860.94Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20266contigH-elongata_contig20266:1232..2815 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.5
Seed ortholog evalue1.1e-126
Seed eggNOG ortholog2880.D7FRA3
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
EggNOG free text desc.beta-glucosidase activity
EggNOG OGsCOG2723@1,KOG0626@2759
EC3.2.1.21
COG Functional cat.G
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBeta-glucosidase, family GH1
Ec32 orthologEc-26_002410.1
Exons5
Model size828
Cds size828
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20266.5744.1prot_H-elongata_contig20266.5744.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20266 1232..2815 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930139.8546362-CDS-H-elongata_contig20266:1231..13631622930139.8546362-CDS-H-elongata_contig20266:1231..1363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 1232..1363 -
1691679296.2797058-CDS-H-elongata_contig20266:1231..13631691679296.2797058-CDS-H-elongata_contig20266:1231..1363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 1232..1363 -
1622930139.86885-CDS-H-elongata_contig20266:1601..17141622930139.86885-CDS-H-elongata_contig20266:1601..1714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 1602..1714 -
1691679296.2894273-CDS-H-elongata_contig20266:1601..17141691679296.2894273-CDS-H-elongata_contig20266:1601..1714Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 1602..1714 -
1622930139.8816845-CDS-H-elongata_contig20266:1842..20541622930139.8816845-CDS-H-elongata_contig20266:1842..2054Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 1843..2054 -
1691679296.2973447-CDS-H-elongata_contig20266:1842..20541691679296.2973447-CDS-H-elongata_contig20266:1842..2054Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 1843..2054 -
1622930139.8920348-CDS-H-elongata_contig20266:2204..24821622930139.8920348-CDS-H-elongata_contig20266:2204..2482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 2205..2482 -
1691679296.3055182-CDS-H-elongata_contig20266:2204..24821691679296.3055182-CDS-H-elongata_contig20266:2204..2482Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 2205..2482 -
1622930139.9020743-CDS-H-elongata_contig20266:2722..28151622930139.9020743-CDS-H-elongata_contig20266:2722..2815Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 2723..2815 -
1691679296.313969-CDS-H-elongata_contig20266:2722..28151691679296.313969-CDS-H-elongata_contig20266:2722..2815Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20266 2723..2815 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20266.5744.1

>prot_H-elongata_contig20266.5744.1 ID=prot_H-elongata_contig20266.5744.1|Name=mRNA_H-elongata_contig20266.5744.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp
CSYPIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPG
GKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSE
ITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSA
DATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASD
DPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEK
EKTMLKGSTDFFGFNHCELFHSNRG*
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mRNA from alignment at H-elongata_contig20266:1232..2815-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20266.5744.1 ID=mRNA_H-elongata_contig20266.5744.1|Name=mRNA_H-elongata_contig20266.5744.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1584bp|location=Sequence derived from alignment at H-elongata_contig20266:1232..2815- (Himanthalia elongata Himel1 dioecious)
TGTTCATATCCCATTAGGGTCATCAATGACGACTCTGGCGATCTCGCGTG TGACCACTATACGCTTTACGAGGAGGATGTGAAGATAATGAAGGTATGTA ACTCATTCCCGTTCGATTAACCTCCTGCCCTCCTGTCCTCAGATTGGTTT TGGTCCTCGGTATCAACTGAAAAAAATCGTGTTTGTGTGGAGATTACGCT GAGAGAGCAGAGAACAGTATTTTGTGGGAGTAAGACGGCTTTCGAGAACA CGCCACTCCTTCACGATGACCCGTTTACTGAATGAATGACTGAATGTGGA AGGATCGCTATTTTTTCGTCGCTATTCTTGCAGGAACTGGGTCTCAAACA CTACAGATTGTCGATCGCAATGCCGCGCATATTTCCCGGGGGCAAAGGAC CGGCTAATGAAGATGGGATTAGCTTTTATAACCGGCTCATCGATTGTCTT CTATCTGCGGGTATTACACCAACATTGACCCTCTATCACTGGGATCTTCC TTCGGAGCTTGAAACCGAATACGGCGGCTGGCAGAGCGAGATTACTGTCG AGCGCTTTGTAGAGTACGCCGAGGTGTGCTTCGAGCGGTTCGGTGACCGC GTGAAGAACTGGTGAGATTACGCGCTCTCGTGACGGTGACGGGCGGTATC GCTTAGAAGAGAAAAAAAAATCCTAGGGGTAGCGCACTCTTGTGTGAATA TTGTCTTCGAAATGCTATTTATCCCCGCACCCCTGGTCTGGTTCCGCTGT CGTTTGTACAGGTTGACGTTCAACGAGCCTTGGTGCTCAGCTGTCCTTGG ATATGGTAACGGCGAGCATGCCCCTGGGCGTACATCTGCAGATGCCACTG AGGTCTACCGGGCCGGTCACAACATGCTCATCGCTCATGCTCGTGCCGTG GACATCTACCGAAATAAGTTTCAGCAAGATCAGAGTGGAGTGATTGGTAT TACCCTCAACGGCAATTGGACAGGTACGAGGTTAAGCGCTCTCACATAAT ATTTCAGCTAATACACAATTAGATACATCCTGTTTGCGTTTCCCCGTCAA AAATACACCTCGAGCTTGTCCCAGCCGTCTGTTCTTGCATGCTTGGCGCA GAGCCCAAGGCTTCCGATGATCCCGAGAAGGCCGAGCGCAACGCTGAAGC AGCTGAGCGGTGCATCTTGTGGAACGTTGGATGGTTCGCGGATCCGGTGT ACTTCGGAGACTATGTGAGTGTACCCAACACCTCGTCAGCCACCGCCTTT TCCTTCAACTCGCAGCGGAACAGGTGTATGCTGTACACGACGAAATATAT CATCATTTTTCAACCTACAGATTAGAGATCGGAAACGTGGCCTTGTCTCG TAATATCGTACCGAAATCGGAATTAGAGACATGTCAACCAAAGATATTTG AACCCATCATTTCACGCTTATTCTCGATGTGACACACTGTTATGTGCCTC AGCCCGATGTAATGAAGAAGCGGTGTGGAGATCGCCTGCCGGAGTTTACG GAGAAAGAAAAGACGATGCTCAAGGGCAGCACCGATTTTTTTGGCTTCAA CCACTGTGAGTTATTTCATTCAAATCGTGGTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig20266:1232..2815-

>mRNA_H-elongata_contig20266.5744.1 ID=mRNA_H-elongata_contig20266.5744.1|Name=mRNA_H-elongata_contig20266.5744.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig20266:1232..2815- (Himanthalia elongata Himel1 dioecious)
TGTTCATATCCCATTAGGGTCATCAATGACGACTCTGGCGATCTCGCGTG
TGACCACTATACGCTTTACGAGGAGGATGTGAAGATAATGAAGTGTTCAT
ATCCCATTAGGGTCATCAATGACGACTCTGGCGATCTCGCGTGTGACCAC
TATACGCTTTACGAGGAGGATGTGAAGATAATGAAGGAACTGGGTCTCAA
ACACTACAGATTGTCGATCGCAATGCCGCGCATATTTCCCGGGGGCAAAG
GACCGGCTAATGAAGATGGGATTAGCTTTTATAACCGGCTCATCGATTGT
CTTCTATCTGCGGGTATTACACCAACATTGACCCTCTATCACTGGGATCT
TCCTTCGGAGCTTGAAACCGAATACGGCGGCTGGCAGAGCGAGATTACTG
TCGAGCGCTTTGTAGAGTACGCCGAGGTGTGCTTCGAGCGGTTCGGTGAC
CGCGTGAAGAACTGGAACTGGGTCTCAAACACTACAGATTGTCGATCGCA
ATGCCGCGCATATTTCCCGGGGGCAAAGGACCGGCTAATGAAGATGGGAT
TAGCTTTTATAACCGGCTCATCGATTGTCTTCTATCTGCGGGTATTACAC
CAACATTGACCCTCTATCACTGGGATCTTCCTTCGGAGCTTGAAACCGAA
TACGGCGGCTGGCAGAGCGAGATTACTGTCGAGCGCTTTGTAGAGTACGC
CGAGGTGTGCTTCGAGCGGTTCGGTGACCGCGTGAAGAACTGGTTGACGT
TCAACGAGCCTTGGTGCTCAGCTGTCCTTGGATATGGTAACGGCGAGCAT
GCCCCTGGGCGTACATCTGCAGATGCCACTGAGGTCTACCGGGCCGGTCA
CAACATGCTCATCGCTCATGCTCGTGCCGTGGACATCTACCGAAATAAGT
TTCAGCAAGATCAGAGTGGAGTGATTGGTATTACCCTCAACGGCAATTGG
ACAGGTTGACGTTCAACGAGCCTTGGTGCTCAGCTGTCCTTGGATATGGT
AACGGCGAGCATGCCCCTGGGCGTACATCTGCAGATGCCACTGAGGTCTA
CCGGGCCGGTCACAACATGCTCATCGCTCATGCTCGTGCCGTGGACATCT
ACCGAAATAAGTTTCAGCAAGATCAGAGTGGAGTGATTGGTATTACCCTC
AACGGCAATTGGACAGAGCCCAAGGCTTCCGATGATCCCGAGAAGGCCGA
GCGCAACGCTGAAGCAGCTGAGCGGTGCATCTTGTGGAACGTTGGATGGT
TCGCGGATCCGGTGTACTTCGGAGACTATAGCCCAAGGCTTCCGATGATC
CCGAGAAGGCCGAGCGCAACGCTGAAGCAGCTGAGCGGTGCATCTTGTGG
AACGTTGGATGGTTCGCGGATCCGGTGTACTTCGGAGACTATCCCGATGT
AATGAAGAAGCGGTGTGGAGATCGCCTGCCGGAGTTTACGGAGAAAGAAA
AGACGATGCTCAAGGGCAGCACCGATTTTTTTGGCTTCAACCACTGTGAG
TTATTTCATTCAAATCGTGGTTAACCCGATGTAATGAAGAAGCGGTGTGG
AGATCGCCTGCCGGAGTTTACGGAGAAAGAAAAGACGATGCTCAAGGGCA
GCACCGATTTTTTTGGCTTCAACCACTGTGAGTTATTTCATTCAAATCGT
GGTTAA
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