mRNA_H-elongata_contig20266.5744.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: D7FRA3_ECTSI (Beta-glucosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA3_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 1.870e-157 Identity = 206/266 (77.44%), Postives = 237/266 (89.10%), Query Frame = 1
Query: 1 CSYPIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
C RV+N D+GDLACDH+TLY+EDVKIMK++GLK+YRLSIAMPRIFPGG+GPANE+GI+FYN LIDCLL AGITP +TLYHWDLP ELE E+GGWQ+ ITVERF+EYAEVCFERFGDRVK+WLTFNEPWC+AVLGYGNGE APG TS+DA +VYRAGH+ML+ HARAV+IYR KF+ Q+GVIG+TLN NWTEPK SDDPE A+ NAEAAER +LWN+GWFADPVY GDYP+VM+ RCGDRLPEFT EK +LKGS+DFFG NH
Sbjct: 37 CKTEGRVVNGDNGDLACDHFTLYKEDVKIMKDMGLKNYRLSIAMPRIFPGGQGPANEEGIAFYNGLIDCLLDAGITPCVTLYHWDLPLELEMEHGGWQNYITVERFLEYAEVCFERFGDRVKSWLTFNEPWCAAVLGYGNGEMAPGCTSSDAVKVYRAGHHMLLGHARAVEIYRKKFRTAQNGVIGVTLNCNWTEPKPSDDPETAKLNAEAAERSVLWNLGWFADPVYKGDYPEVMRNRCGDRLPEFTADEKALLKGSSDFFGLNH 302
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: M4BK81_HYAAE (Beta-glucosidase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BK81_HYAAE) HSP 1 Score: 371 bits (952), Expect = 4.060e-124 Identity = 173/270 (64.07%), Postives = 205/270 (75.93%), Query Frame = 1
Query: 1 CSYPIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNHCEL 807
C P +VIN+D+GD A DHY Y+EDV++MK++GL YR SIA PRI PGG G NE+G++FYN LI+ LL+ ITP +TLYHWDLP L+ EY GW + E F +YA VCF+RFGDRVKNWLT NEPWCSA LGYG G HAPGR TE Y AGHN+L+AHARAV+ YRN+FQ Q GVIGITLN +W EPK +DD + RN EAAER +L+++GWFADPVY GDYP VMK RCG RLPEFT+ EKT+LKGS+DFFG NH L
Sbjct: 40 CRTPNKVINNDTGDKAVDHYHRYKEDVQLMKKMGLHAYRFSIAWPRILPGGIGNVNEEGVAFYNNLINELLANNITPIVTLYHWDLPLPLQIEYDGWLGGKFIQEAFTQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGTGSHAPGRKCKPQTEAYLAGHNLLLAHARAVEAYRNEFQAAQMGVIGITLNCDWREPKPTDDSVQKARNKEAAERSLLFHLGWFADPVYAGDYPQVMKDRCGLRLPEFTDDEKTLLKGSSDFFGLNHYGL 309
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A3M6VFE5_9STRA (Beta-glucosidase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFE5_9STRA) HSP 1 Score: 364 bits (934), Expect = 2.150e-121 Identity = 169/267 (63.30%), Postives = 204/267 (76.40%), Query Frame = 1
Query: 10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITV-ERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNHCEL 807
P +V+N D+GD A DHY LY++DV++MK++GL+ YRLSIA PRI P G G NE+G+ FYN LI+ LL I P +TLYHWDLP L+TEY GW + E F +YA VCF+RFGDRVKNWLT NEPWC+A LGYGNG HAPGR S TE Y AGHNML+AHARAV+ YRN+FQ Q G IGITLN +W EP ++DP + +N EAAER +L+++GWFADPVY GDYP VMK RCG RLP+FTE+EK +LKGS+DFFG NH L
Sbjct: 43 PGKVVNGDTGDKAVDHYHLYKQDVQLMKKMGLQAYRLSIAWPRIIPAGIGKVNEEGVEFYNNLINELLDNDIIPLVTLYHWDLPLALQTEYDGWLGNTFIQEAFTQYARVCFQRFGDRVKNWLTLNEPWCAAFLGYGNGIHAPGRKSKPQTEAYLAGHNMLLAHARAVEAYRNEFQAVQKGRIGITLNCDWREPAPTEDPVQKVKNEEAAERSLLFSLGWFADPVYKGDYPQVMKDRCGLRLPKFTEEEKKLLKGSSDFFGLNHYGL 309
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A835Z9S9_9STRA (Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S9_9STRA) HSP 1 Score: 365 bits (936), Expect = 2.980e-121 Identity = 162/256 (63.28%), Postives = 196/256 (76.56%), Query Frame = 1
Query: 31 DSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
D+GD+ACDH+ Y+EDVK+M+ LGLK+YR SI+ PRI P G+GPAN +G++FY+ LIDCLL+ GITP +TLYHWDLP LETE+GGW V F EYA +CF FGDRVK WLTFNEPWC+ VLGYG GEHAPG TSAD +VY +GH+ L+AHA AVD+YR +FQ Q G IGITLN NW EP A D A + +AAER LW +GWFADP++ GDYP+ M+ RCG RLP FTE+EK +LKGS+DF G NH
Sbjct: 71 DTGDVACDHFHRYQEDVKLMQSLGLKNYRFSISWPRIQPTGRGPANAEGVAFYHALIDCLLAHGITPLVTLYHWDLPQALETEHGGWLGREVVPAFEEYARLCFAAFGDRVKTWLTFNEPWCTCVLGYGTGEHAPGATSADGAKVYLSGHHCLLAHAAAVDVYRREFQPAQRGAIGITLNANWNEPLAHSDVAIAANHRDAAERMTLWALGWFADPIWKGDYPEEMRARCGPRLPSFTEEEKVLLKGSSDFLGLNH 326
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: D0NSJ8_PHYIT (Beta-glucosidase n=16 Tax=Phytophthora TaxID=4783 RepID=D0NSJ8_PHYIT) HSP 1 Score: 363 bits (932), Expect = 4.050e-121 Identity = 169/264 (64.02%), Postives = 202/264 (76.52%), Query Frame = 1
Query: 10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
P +++N D+G+ A DHY Y+EDV++MK++GLK YRLSIA PRI P G G NE+G+ FYN LI+ LL+ ITP +TLYHWDLP L+TEY GW + + FV+YA VCF+RFGDRV NWLT NEPWCSA LGYGNG HAPGR TEVY AGHN+L+AHARAV+ YRN+FQ Q G IGITLN +W EP A+DDP + +N EAAER +L+ +GWFADPVY GDYP VMK RCG RLP FTE EK +LKGS+DFFG NH
Sbjct: 43 PGKIVNGDTGEKAVDHYHRYKEDVQLMKKMGLKAYRLSIAWPRIIPAGVGAVNEEGVEFYNNLINELLANDITPLVTLYHWDLPLALQTEYDGWLGGRVIQDAFVQYARVCFQRFGDRVTNWLTLNEPWCSAFLGYGNGVHAPGRKWKPHTEVYLAGHNLLLAHARAVEAYRNEFQATQKGRIGITLNCDWREPAATDDPVQKAKNEEAAERSLLFFLGWFADPVYKGDYPQVMKDRCGLRLPTFTEDEKKLLKGSSDFFGLNH 306
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A662XAV5_9STRA (Beta-glucosidase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XAV5_9STRA) HSP 1 Score: 362 bits (929), Expect = 1.620e-119 Identity = 165/264 (62.50%), Postives = 204/264 (77.27%), Query Frame = 1
Query: 10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
P ++++ D+G A DH+ Y+EDV++MK +GLK YR+SIA PRI P G G NE+G+ FYNRLID LL+ GITP +TLYHWDLP L+TE+ GW + + F +YA VCF+RFGDRVKNWLT NEPWCSA LG+GNG HAPGR TEVY AGHN+L+AHARAV++YRN+FQ Q G IGITLN +W EP ++DPE+ +N EA+ER +L+ +GWFADPVY GDYP VMK RCG RLP+FTE EK +LKGS+DFFG NH
Sbjct: 129 PGKIVHGDTGAQAVDHFHRYKEDVQLMKNMGLKAYRMSIAWPRIIPAGVGKVNEEGVDFYNRLIDELLANGITPLVTLYHWDLPLPLQTEFDGWLGGKFIQDAFAQYARVCFQRFGDRVKNWLTLNEPWCSAFLGFGNGVHAPGRKHKPQTEVYIAGHNLLLAHARAVEVYRNEFQAVQKGKIGITLNCDWREPAPTNDPEQHAKNVEASERSLLFFLGWFADPVYLGDYPQVMKDRCGLRLPKFTEDEKKLLKGSSDFFGLNH 392
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A0P1B4X8_PLAHL (Beta-glucosidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4X8_PLAHL) HSP 1 Score: 358 bits (919), Expect = 3.740e-119 Identity = 165/264 (62.50%), Postives = 203/264 (76.89%), Query Frame = 1
Query: 10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
P +V+N D+G+ A DHY LY+EDV++MK++GLK YRLS+A PRI P G G NE+GI FY+ LI+ LL+ ITP +TLYHWDLP L+ EY GW + F +YA VCF+RFGDRVKNWLT NEPWCSA LGYGNG HAPGR +E Y +GHN+L+AHARAVD YR++FQ Q+G IGITLN +W EPK +DDP + +N EAAER +L+++GWFADPVY GDYP VMK RCG RLP FT++EK +LKGS+DFFG NH
Sbjct: 43 PGKVVNGDTGEKAVDHYHLYKEDVELMKKMGLKFYRLSLAWPRIIPAGVGKVNEEGIEFYDNLINELLANDITPLVTLYHWDLPLALQIEYDGWLGGRFIQDAFTQYARVCFQRFGDRVKNWLTLNEPWCSAFLGYGNGVHAPGRKCNPQSEAYISGHNLLLAHARAVDAYRHEFQAVQNGRIGITLNCDWREPKPTDDPLEKAKNEEAAERSLLFSLGWFADPVYRGDYPQVMKDRCGLRLPRFTDEEKKLLKGSSDFFGLNH 306
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A836C8J0_9STRA (Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J0_9STRA) HSP 1 Score: 360 bits (924), Expect = 6.850e-119 Identity = 158/256 (61.72%), Postives = 197/256 (76.95%), Query Frame = 1
Query: 31 DSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
D+GD+AC H+ YEEDVK+M++LG K+YRLSI+ RI P G+GP N +G++FYN LI+CLL+ G+ P +TLYHWDLP LE E GGWQS F +YA +CFE FGDRVKNWLTFNEPWC +LGYG GEHAPG T D T+VY A HN+L AHA AVD+YR +++ Q GVIGITLN NW EP DP A+RNA+AA R ++W++GWFADP++ GDYP M++RCGDRLP FT++EK +LKGS+DF G NH
Sbjct: 80 DNGDVACGHFFKYEEDVKLMQKLGFKNYRLSISWSRIQPTGRGPINAEGVAFYNDLINCLLAHGVEPLITLYHWDLPQALEDELGGWQSREIAPIFCDYARLCFELFGDRVKNWLTFNEPWCVCLLGYGTGEHAPGITCDDGTKVYMAAHNVLRAHAAAVDVYRREYKAQQGGVIGITLNCNWNEPVPDRDPAAAQRNADAAHRILMWSLGWFADPIWRGDYPPEMRERCGDRLPTFTDEEKALLKGSSDFLGLNH 335
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A8K1CEM5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEM5_PYTOL) HSP 1 Score: 355 bits (912), Expect = 3.900e-118 Identity = 165/270 (61.11%), Postives = 199/270 (73.70%), Query Frame = 1
Query: 10 PIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQS-EITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNHCELFHS 816
P +VIN D+G A DHY Y+EDV+ MK +GLK+YR SIA PRI P G G NE+G++FYN LI+ LL+ GI P +TLYHWDLP L+TEY GW E FVEYA VCF+RFGDRVK WLTFNEP+C+ YG G HAPGR +TE Y A HNML+AHA+AVD+YR +FQ Q+G +GITL W EP A+ DP++ +RNAEAAER +L+ VGWFADPVY GDYP VMK CGDRLP FT+ EK +LKGS+DFFG NH F++
Sbjct: 43 PGKVINMDTGARADDHYHRYKEDVQHMKSMGLKNYRFSIAWPRIIPAGVGAVNEEGVAFYNNLINELLANGIEPLITLYHWDLPLALQTEYDGWLGGEFIQNAFVEYARVCFDRFGDRVKRWLTFNEPYCATYFSYGTGIHAPGRKHKGSTEAYIAAHNMLLAHAKAVDLYRKEFQPRQNGAVGITLVSEWREPAAATDPQEQKRNAEAAERAVLFMVGWFADPVYLGDYPQVMKDCCGDRLPSFTDDEKKLLKGSSDFFGLNHYSTFYT 312
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Match: A0A835YNG2_9STRA (Beta-glucosidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG2_9STRA) HSP 1 Score: 358 bits (918), Expect = 5.030e-118 Identity = 156/256 (60.94%), Postives = 197/256 (76.95%), Query Frame = 1
Query: 31 DSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGGKGPANEDGISFYNRLIDCLLSAGITPTLTLYHWDLPSELETEYGGWQSEITVERFVEYAEVCFERFGDRVKNWLTFNEPWCSAVLGYGNGEHAPGRTSADATEVYRAGHNMLIAHARAVDIYRNKFQQDQSGVIGITLNGNWTEPKASDDPEKAERNAEAAERCILWNVGWFADPVYFGDYPDVMKKRCGDRLPEFTEKEKTMLKGSTDFFGFNH 798
D+GD+AC H+ YEEDVK+M++LG K+YRLSI+ RI P G+GP N +G++FYN LI+CLL+ G+ P +TLYHWDLP LE E GGWQ+ F +YA +CFE FGDRVKNWLTFNEPWC +LGYG GEHAPG T D ++VY A HN+L AHA AVDIYR +++ Q GVIGITLN NW EP DP A+RNA+AA R ++W++GWFADP++ G+YP M++RCGDRLP FT++EK +LKGS+DF G NH
Sbjct: 80 DNGDVACGHFFKYEEDVKLMQQLGFKNYRLSISWSRIQPTGRGPINAEGVAFYNDLINCLLAHGVEPLITLYHWDLPQALEDELGGWQNREIAPTFCDYARLCFELFGDRVKNWLTFNEPWCVCLLGYGTGEHAPGITCDDGSKVYMAAHNVLRAHAAAVDIYRREYKAQQGGVIGITLNCNWNEPVPDKDPAAAQRNADAAHRILMWSLGWFADPIWRGEYPPEMRQRCGDRLPAFTDEEKALLKGSSDFLGLNH 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20266.5744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20266.5744.1 >prot_H-elongata_contig20266.5744.1 ID=prot_H-elongata_contig20266.5744.1|Name=mRNA_H-elongata_contig20266.5744.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp CSYPIRVINDDSGDLACDHYTLYEEDVKIMKELGLKHYRLSIAMPRIFPGback to top mRNA from alignment at H-elongata_contig20266:1232..2815- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20266.5744.1 ID=mRNA_H-elongata_contig20266.5744.1|Name=mRNA_H-elongata_contig20266.5744.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1584bp|location=Sequence derived from alignment at H-elongata_contig20266:1232..2815- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20266:1232..2815- >mRNA_H-elongata_contig20266.5744.1 ID=mRNA_H-elongata_contig20266.5744.1|Name=mRNA_H-elongata_contig20266.5744.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig20266:1232..2815- (Himanthalia elongata Himel1 dioecious)back to top |