mRNA_H-elongata_contig20104.5667.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: D7G248_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G248_ECTSI) HSP 1 Score: 447 bits (1150), Expect = 1.290e-148 Identity = 210/272 (77.21%), Postives = 239/272 (87.87%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVKKDDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPSIDGGGVQMPIHCMDVFAMGRLLERIYPEGASAALDKYLKKMLLPDPSKRPTASQYLRCAFLRRQCVKDLSALELFSVKTPEEKAELLRRFTSKTHYTQALVHKVMP 816
G ++GG VSIFRL LK CPPIAR + Q GM+ LRTLRHPHVLACLDSVQL+TEYVI TE+V+PLM+WVRE C KKD+QVAWGMHCLC ALKFLHEDCK YHNNISTDTVFV SGGDWKLGGMDLLS LGGKDYSIA+RRGLQPR+FQSAERNNDDWWRY+P++DGGGV MPIHCMDV+A+GRLLER+YPEG + LD+Y+ KMLLP+P+KRPTASQYLRCAFLR+Q VKDL+ALELFSVK+PEEKAELL+RF ++H Q + K MP
Sbjct: 33 GTKRTGGGSVSIFRLDLKTCPPIARVSGQEGMKSLRTLRHPHVLACLDSVQLETEYVIATEQVIPLMRWVRECCEPGKKDEQVAWGMHCLCSALKFLHEDCKFYHNNISTDTVFVTSGGDWKLGGMDLLSPLGGKDYSIAERRGLQPRQFQSAERNNDDWWRYSPTLDGGGVHMPIHCMDVYALGRLLERVYPEGTPSGLDRYVGKMLLPEPTKRPTASQYLRCAFLRKQTVKDLTALELFSVKSPEEKAELLQRFAIESHSKQ--ISKEMP 302
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A835ZEQ5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ5_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.720e-80 Identity = 136/291 (46.74%), Postives = 181/291 (62.20%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVKKDDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRGLQ---------PREFQSAERNNDDWWRYTPSIDGGGVQMPIHCMDVFAMGRLLERIYPEGASAALDKYLKKMLLPDPSKRPTASQYLRCAFLRRQCVKDLSALELFSVKTPEEKAELLRRFTSKTHYTQ-ALVHKVMPLLLRELSIA 843
G+ ++ GE VSIFRL K P+A EA Q G QKLR+LRHP++LACLD +LDT+ V+ TE+V+PL W+ KKDDQ+AWGMHC+C ALKFLHE CK HNN+ DT+FV GGDWKLGGMDLLS+L G D + + +Q P Q + +P+H D++++GR+L+ YPEG +L KY++KM+ P +RPT SQYLRCAFL+R V+ L LE +SV + EEK LR T+ + AL HK+ LLLR++ +A
Sbjct: 34 GVKRANGETVSIFRLAKKGTSPLAVEAGQRGFQKLRSLRHPYILACLDGAELDTDVVMATEEVVPLGDWLATRIEAGKKDDQIAWGMHCMCAALKFLHESCKQSHNNVCADTIFVTRGGDWKLGGMDLLSALDGSDNFLQIHQSIQVCAIGFVVCPERLQGSMHTL--------------ANLPLHIQDIWSLGRVLQVAYPEGTPPSLSKYVEKMMDARPERRPTPSQYLRCAFLKRPAVQHLQQLEDWSVASAEEKGTFLRGGTAIAACPRDALRHKLSALLLRDIEMA 310
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A8K1CPY0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY0_PYTOL) HSP 1 Score: 118 bits (295), Expect = 7.090e-26 Identity = 87/285 (30.53%), Postives = 138/285 (48.42%), Query Frame = 1
Query: 70 AREAAQAGMQKLRTLRHPHVLACLDSVQLDTE--YVIVTEKVMPLMQWV----REHCNTVKKDDQ-VAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSL--GGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPSIDGGGVQMPIHCMDVFAMGRLLERIY------PEGASAA------LDKYLKKMLLPDPSKRPTASQYLRCAFLRRQCVKDLSALELFSVKTPEEKAELLRRFTSKTH-YTQAL-VHKVMPLLLRELSIACNTA 855
A + Q +++++TLRHP++LA +D ++ V+VTE V+PL Q++ RE+ T + V+WG+ + AL+F+ DCKL H ++ ++FV GGDWKLGG +L L G Y +++ E +W +I P +DV++ LL I+ P S+A L +K + DP +RPT ++L + +K + LE +VKTPEEK E + S + Q+ VHKV+P L + TA
Sbjct: 66 ASQLTQNALKRIKTLRHPNILAFVDGTEVPNNGPIVLVTEPVIPLAQYLEDLRREYGATSDEFQMSVSWGLRSVLLALQFITVDCKLLHGRVNPQSIFVTKGGDWKLGGFELTGELTSDGPSYIFTAFEQFADGNYKAPEWQRREW----KNIGNA----PSSAVDVWSFACLLFYIFNDSQLRPNELSSASNIPHALRMQYRKAVEADPRRRPTPDKFLASTYFDTPFIKRMDFLENLAVKTPEEKVEFYKDLCSHLNTLPQSFGVHKVLPALKGVVEFGAATA 342
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A8J4PUM1_9MYCE (Protein kinase domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PUM1_9MYCE) HSP 1 Score: 117 bits (292), Expect = 1.700e-25 Identity = 85/292 (29.11%), Postives = 140/292 (47.95%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVKK-DDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRG-LQPREFQSAERNNDDWWRYTPSIDGGGVQMPIHCMDVFAMGRLLERIYPEGASAALD----KYLKKMLLPD--------PSKRPTASQYLRCA-FLRRQCVKDLSALELFSVKTPEEKAELLRRFTSKTHYTQALV--HKVMPLLL 825
G K G VS+F +K P E A+ G ++ +T+RHP+ L LD ++L+T IVTE + PL + E +K + ++WG++ + AL FL+ DC L H N++T +FV GGDWKLGG+DL+S L + +I + L P ++++ E W + Q P + +D + +G L+ Y S + D + K+L P P R +++L A + + V+ LE ++K EK ++ + V K++P LL
Sbjct: 33 GTRKDDGSAVSVFSFDIKK-NPTKLEVAKNGFKRAKTIRHPNFLTFLDGIELETNIYIVTEPISPLDDKITE----IKGFEHAISWGIYQISKALSFLNNDCNLTHGNLNTSNIFVTKGGDWKLGGLDLVSDLRDSNNNILKNHNDLVPLKYKAPEITKGQWSQLN--------QSPAYAVDSWMLGCLIYESYNGPMSKSEDVRDLNSIPKILHPQYQKCFSTKPETRLNPTKFLETAPYFQNSFVEICVFLENITLKDTFEKETFFKKLDQQIDKIPISVCKFKILPHLL 311
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A5D6Y4P8_9STRA (Protein kinase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4P8_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.400e-25 Identity = 85/290 (29.31%), Postives = 145/290 (50.00%), Query Frame = 1
Query: 22 EQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTE--YVIVTEKVMPLMQWVRE-----HCNTVKKDDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSL--GGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPSIDGGGVQMPIHCMDVFAMGRLLERIYPEG-------ASA-----ALDKYLKKMLLPDPSKRPTASQYLRCAFLRRQCVKDLSALELFSVKTPEEKAELLRRFTSK-THYTQAL-VHKVMPLL 822
++VSIF+ + AQ +++L+TLRHP+VLA +D ++ +IVTE V+PL ++ E + + + VAWG+ + AL+F+ DCKL H ++ ++FV GGDWKLGG ++ + + G Y F++ E +W ++ G P + +D++A L+ +Y + ASA AL + +K + P++RP+ + L +F +K + LE ++K+PEEKAE + + +A VHKV+P L
Sbjct: 55 QRVSIFKARAAHA-----QLAQNALRRLKTLRHPNVLAFVDGAEVAATGAVLIVTEPVVPLAVYLAELRARYGAGSDEFNASVAWGLRSVLLALQFITGDCKLLHGRLNPHSIFVTKGGDWKLGGFEMTAEITSDGPSYIYTAFESFSDANFKAPECLRKEW----KAVATG----PSYAVDMWAFACLMYYVYNDSQVRTSDLASASNIPPALRTHYRKAIDAAPARRPSPPKLLASSFFDTPFIKRMDFLENLAIKSPEEKAEFYKDLCANLASLPEAFGVHKVLPAL 331
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A814CTB3_9BILA (Hypothetical protein n=17 Tax=Rotaria TaxID=231623 RepID=A0A814CTB3_9BILA) HSP 1 Score: 115 bits (287), Expect = 7.610e-25 Identity = 87/299 (29.10%), Postives = 146/299 (48.83%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAR-EAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVKKDD-------QVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGG-DWKLGGMDLLSSLGGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPSIDGGGVQMPIHCMDVFAMGRLLERIYPEGASAALDKYLK-------------KMLLPDPSKRPTASQYLRCAFLRRQC-VKDLSALELFSVKTPEEKAELLRRFTSKTHYTQALVH--KVMPLL 822
G K+ G+ V+IF +C A + A+A +++++TLRHP++L LDSV+ D +VTEK + L ++ E + D ++AWG+ LC L FLH+DCKL H NI+TDT+FV++ DWKLG ++ + S+ ++ P F A + RY P GG D++ +G L+ I+ + + Y + +++ P+PS R + + L+ F++ V+ L LE +K P EK + K + ++ K++PLL
Sbjct: 54 GKKKTTGDLVTIF-----SCQNDAHIQLAKAALKRMKTLRHPNILIYLDSVETDKSVYVVTEKAVTLETYLNELKSNNNVTDFNSEHLLEIAWGLQQLCRVLIFLHDDCKLSHGNINTDTIFVDAKSCDWKLGCLEFVQSINEAQINL-------PSRFLPACQ------RYEPPSKKGGDSQKAR--DIWLVGTLIWEIFNGNGATSATSYRQLGSIPRPLSAAYGELINPNPSLRSSLDKLLQSPFIQNNSLVECLLFLEQIQLKDPGEKQTFFTSLSDKVDQFPSHINERKLLPLL 332
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A673UKW1_SURSU (SCY1 like pseudokinase 1 n=3 Tax=Feliformia TaxID=379583 RepID=A0A673UKW1_SURSU) HSP 1 Score: 114 bits (286), Expect = 1.040e-24 Identity = 90/298 (30.20%), Postives = 144/298 (48.32%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVK-KDDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPS--IDGGGVQMPIH-CMDVFAMGRLLERIY----PEGASAALDKYLKKMLLP--------DPSKRPTASQYLR-C----AFLRRQCVKDLSALELFSVKTPEEKAELLRRFT-SKTHYTQALV-HKVMPLLL 825
G K+ G VSIF +K + A+A ++L+TLRHP++LA +D ++ D +VTE V PL +++E KD +++WG+H + AL FL DC L HNN+ VFV+ G+WKLGG+D + YS G PR + + +Y P DG G + D++ +G L+ ++ P A+ + K L+P +P RP +++L+ C F+ + V+ LE +K P EK + + + S + + HKV+P LL
Sbjct: 34 GRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRLKTLRHPNILAYIDGLETDRCLHVVTEAVTPLGMYLKERAEAGGLKDLELSWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYM-------YSAQGNGGGPPR------KGIPELEQYDPPELADGSGRAVREKWSADMWRLGCLIWEVFNGPLPRAAALRNPGKIPKSLVPHYCELVGANPKVRPNPARFLQNCRGPGGFMNNRFVETNLFLEEIQIKEPAEKQKFFQELSKSLDSFPEDFCRHKVLPQLL 318
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A667I9N4_LYNCA (SCY1 like pseudokinase 1 n=1 Tax=Lynx canadensis TaxID=61383 RepID=A0A667I9N4_LYNCA) HSP 1 Score: 114 bits (286), Expect = 1.050e-24 Identity = 90/298 (30.20%), Postives = 144/298 (48.32%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVK-KDDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPS--IDGGGVQMPIH-CMDVFAMGRLLERIY----PEGASAALDKYLKKMLLP--------DPSKRPTASQYLR-C----AFLRRQCVKDLSALELFSVKTPEEKAELLRRFT-SKTHYTQALV-HKVMPLLL 825
G K+ G VSIF +K + A+A ++L+TLRHP++LA +D ++ D +VTE V PL +++E KD +++WG+H + AL FL DC L HNN+ VFV+ G+WKLGG+D + YS G PR + + +Y P DG G + D++ +G L+ ++ P A+ + K L+P +P RP +++L+ C F+ + V+ LE +K P EK + + + S + + HKV+P LL
Sbjct: 34 GRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRLKTLRHPNILAYIDGLETDKCLHVVTEAVTPLGMYLKERAEAGGLKDLELSWGLHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYM-------YSAQGNGGGPPR------KGVPELEQYDPPELADGSGRAVREKWSADMWRLGCLIWEVFNGPLPRAAALRNPGKIPKSLVPHYCELVGANPKVRPNPARFLQNCRAPGGFMNNRFVETNLFLEEIQIKEPAEKQKFFQELSKSLDSFPEDFCRHKVLPQLL 318
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: UPI001BB21597 (N-terminal kinase-like protein n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB21597) HSP 1 Score: 114 bits (285), Expect = 1.510e-24 Identity = 83/298 (27.85%), Postives = 144/298 (48.32%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVKKDDQVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRGLQPREFQSAERNNDDWWRYTPS--IDGGGVQMPIH-CMDVFAMGRLLERIY----PEGASAALDKYLKKMLLPD--------PSKRPTASQYLRCA-----FLRRQCVKDLSALELFSVKTPEEKAELLRRFTSKTHY--TQALVHKVMPLLLR 828
G K+ GE VS+F + LK+ + A++ ++L+TLRHP+VL +D ++ D +VTE+V PL +++ K+ ++WG++ + L FLH DCKL HNN++ VFVN G+WKLG +D ++ G+ +I + GL+ E +Y P D + P D++ +G L+ ++ P +S + K L+P+ P RP ++++ F++ V LE +K EK L ++ + H+++PLLL+
Sbjct: 35 GKRKANGEPVSVFIVDLKSHSESIAQLAKSAHKRLKTLRHPNVLLYVDGLETDNVIYVVTEEVTPLATFLK---TNAPKESTISWGLYQVVKGLSFLHNDCKLKHNNVNLSCVFVNRAGEWKLGAVDYITPSEGEGSTIPDK-GLKSLE------------KYNPPEMTDMRAKKRPCPWAADMWGLGCLIWEVFNGTLPRTSSLKALGKIPKPLVPNYCELVGANPVSRPNPAKFIDSCRNSGGFMKNSFVDTNLFLEEIQIKDQTEKTNFLSGLSAAIDDFPEEFCRHRILPLLLQ 316
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Match: A0A8B9KR18_ASTMX (SCY1 like pseudokinase 1 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9KR18_ASTMX) HSP 1 Score: 114 bits (284), Expect = 1.740e-24 Identity = 86/297 (28.96%), Postives = 143/297 (48.15%), Query Frame = 1
Query: 1 GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVQLDTEYVIVTEKVMPLMQWVREHCNTVKKDD-QVAWGMHCLCCALKFLHEDCKLYHNNISTDTVFVNSGGDWKLGGMDLLSSLGGKDYSIAQRRGLQPREFQSAERNNDDWWRYTP--SIDGGGVQMPIHCMDVFAMGRLLERIY----PEGASAALDKYLKKMLLP--------DPSKRPTASQYLR-C----AFLRRQCVKDLSALELFSVKTPEEKAELLRRFTSK--THYTQALVHKVMPLLL 825
G K+ GE VSIF + + A+A ++++TLRHP++L+ +D ++ D +VTE V PL ++ + + +++WG+H AL FL DC L HNN+ T +FV+ G+WKLGG+D ++S G+ S+ + + P D +Y P S + GG + DV+ +G L+ ++ P +S + K L+P +P RP +++L+ C FL V+ LE +K P EK + + + + HKV+P LL
Sbjct: 33 GKRKTTGEPVSIFLYEVAQGTEEQTQLAKAAFKRMKTLRHPNILSYVDGLETDKSLYLVTEPVTPLAAHLKARSESGGSGELEISWGLHQTVKALSFLVNDCHLLHNNLGTWAIFVDRAGEWKLGGLDHVTSDQGEPTSLPPAKVVNP-----------DLEKYDPPESPNSGGEKWSG---DVWRLGCLIWEVFNGPLPRASSLRSLGKIPKQLVPHYCELVGANPKARPNPARFLQNCRSSGGFLSNSFVESNLFLEQIQIKEPAEKQQFFQDLSENLDSFPEDFCKHKVLPQLL 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20104.5667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20104.5667.1 >prot_H-elongata_contig20104.5667.1 ID=prot_H-elongata_contig20104.5667.1|Name=mRNA_H-elongata_contig20104.5667.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=309bp GLPKSGGEQVSIFRLTLKACPPIAREAAQAGMQKLRTLRHPHVLACLDSVback to top mRNA from alignment at H-elongata_contig20104:1365..6295- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20104.5667.1 ID=mRNA_H-elongata_contig20104.5667.1|Name=mRNA_H-elongata_contig20104.5667.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4931bp|location=Sequence derived from alignment at H-elongata_contig20104:1365..6295- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20104:1365..6295- >mRNA_H-elongata_contig20104.5667.1 ID=mRNA_H-elongata_contig20104.5667.1|Name=mRNA_H-elongata_contig20104.5667.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1854bp|location=Sequence derived from alignment at H-elongata_contig20104:1365..6295- (Himanthalia elongata Himel1 dioecious)back to top |