mRNA_H-elongata_contig20100.5663.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: D7FVM2_ECTSI (Carbohydrate kinase, FGGY n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM2_ECTSI) HSP 1 Score: 559 bits (1440), Expect = 1.660e-196 Identity = 292/409 (71.39%), Postives = 324/409 (79.22%), Query Frame = 1
Query: 1 SGVRAVVVDAEGREQFGSSLRWAAPDDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTE--SPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHVRGVRGSGSMVSDWNNALKAGFDVELLRWPAWLLKSELGRRLGHCLPQVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTG------TLRVGEGGSRMRQQEIGNGAG-------------------LWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIAR 1146
SGVRAVV+D EG +F SSLRWAAPDDPDEWLRAADTL+G++PL LRKR SRVCFSGTSASCLLVD +DP +V RGP MY +NTLTE S EAARRAL ALE IAP+KHTTLSGTSALMKLVCWHLESPI +EAF HQADYV+AH RG RG GS+VSDWNNALKAGFDV+ LRWP WLL+S+LG +G CLP+V MPGA VG VSA+M+ SRF+LP +C VVAGTTDSIAAFIAA+ TTPGHAVTSLGSTLA+KMLSERRVEDASRGVYSHRLG+ G +V E + + G G LWLVGGASNVGCAVLR EGFE ELEA S +I+P+TDSPL+YYPL RGT GERFP NDPLKKS+LEPRPE R EYLHGLL AIAR
Sbjct: 15 SGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQIAPDKHTTLSGTSALMKLVCWHLESPIAPEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVDTLRWPGWLLESKLGEEIGRCLPEVTMPGAVVGPVSASMA-SRFNLPPTCSVVAGTTDSIAAFIAADATTPGHAVTSLGSTLAVKMLSERRVEDASRGVYSHRLGNAGRDRGPANAKVEEINQNQQGRREGGSDGVNADDAXXXXXXXXXXXXXLWLVGGASNVGCAVLRVEGFESSELEARSSDIDPSTDSPLEYYPLQRGTVGERFPTNDPLKKSILEPRPENRTEYLHGLLHAIAR 422
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: A0A6H5JI06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI06_9PHAE) HSP 1 Score: 560 bits (1442), Expect = 4.480e-194 Identity = 298/410 (72.68%), Postives = 326/410 (79.51%), Query Frame = 1
Query: 1 SGVRAVVVDAEGREQFGSSLRWAAPDDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTE--SPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHVRGVRGSGSMVSDWNNALKAGFDVELLRWPAWLLKSELGRRLGHCLPQVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTG------TLRVGEGGSRM--RQQEIGNGAG---------------LWLVGGASNVGCAVLRTEGFEPW---ELEALSIEINPATDSPLKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIAR 1146
SGVRAVV+D EG +F SSLRWAAPDDPDEWLRAADTL+G++PL LRKR SRVCFSGTSASCLLVD +DP +V RGP MY +NTLTE S EAARRAL ALE IAP+KHTTLSGTSALMKLVCWHLESPI +EAF HQADYV+AH RG RG GS+VSDWNNALKAGFDVE LRWP WLL S+LG + HCLP+VAMPGA VG VSA+M+ SRFSLP +C VVAGTTDSIAAFIAA+ TTPGHAVTSLGSTLA+KMLSERRVEDAS GVYSHRLG+ G T +V E R++ NG LWLVGGASNVGCAVLR EGFE ELEA S +I+P+TDSPLKYYPL RGT GERFP NDPLKKS+LEPRPE R EYLHGLLQAIAR
Sbjct: 157 SGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDIHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQIAPDKHTTLSGTSALMKLVCWHLESPIAPEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLLGSKLGEEIRHCLPEVAMPGAVVGPVSASMA-SRFSLPPTCSVVAGTTDSIAAFIAADATTPGHAVTSLGSTLAVKMLSERRVEDASLGVYSHRLGNAGKVRGAATAKVEESNQNQQGRRERGSNGVDXXXXXXXXXXXXXXDLWLVGGASNVGCAVLRVEGFEASISSELEARSSDIDPSTDSPLKYYPLQRGTVGERFPTNDPLKKSILEPRPENRTEYLHGLLQAIAR 565
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: A0A836CG13_9STRA (Carbohydrate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG13_9STRA) HSP 1 Score: 358 bits (919), Expect = 9.530e-118 Identity = 208/393 (52.93%), Postives = 252/393 (64.12%), Query Frame = 1
Query: 1 SGVRAVVVDAEGRE-QFGSSLRWAAP---DDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTESPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHVRGVRGSGSMVSDWNNALKAGFDVELLRWPAWLLKSELGRRLGHCLPQVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTP-----GHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLK--YYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIAR 1146
SG RAVV+D+ + Q + ++W A D P WL AA LL ++P + R +R+C SGTSASCLLV+ +DP V RGP MY +NTL ESP AA ALE +AP HTTLSGTSALMKL+ WH E+P+ EA HQADYVSA++RG G+ +V+DWNNALK GFDVE LRWP WL + G +P+V PGA G V A + R LP C+V AGTTDSIAAF+AA+ ++ GHAVTSLGSTLA+K+LS RVEDASRGVYSHRLG G+WLVGGASN GCAV R GF EL LS +++ +T L YYPL G +GERFP NDP K++LEP P R EYL GLLQ++AR
Sbjct: 16 SGARAVVIDSATKTVQHVADVKWTAEEGYDSPQAWLSAAAALLDDVPAAAKARMARICVSGTSASCLLVERSDPLAVTRGPAMYNYNTLRESPAAAXXXXXALERVAPPLHTTLSGTSALMKLLTWHAEAPLGAHEALAHQADYVSAYMRGGAGA-EIVTDWNNALKTGFDVEQLRWPDWL-RGLHGGAAAAAVPRVVRPGAVTGAVGAAFAR-RHGLPPRCEVAAGTTDSIAAFLAADGSSXXXXXAGHAVTSLGSTLALKLLSATRVEDASRGVYSHRLGD----------------------GMWLVGGASNTGCAVFRQLGFSDAELAELSADMSESTGEELGEVYYPL-AGQQGERFPFNDPDMKAILEPVPASRGEYLAGLLQSLAR 382
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: W7TDC3_9STRA (Carbohydrate fggy n=4 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDC3_9STRA) HSP 1 Score: 296 bits (759), Expect = 3.970e-93 Identity = 193/412 (46.84%), Postives = 233/412 (56.55%), Query Frame = 1
Query: 1 SGVRAVVVDAEGREQ--FGSSLRWA---APDDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTESPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHV-------RGVRGSGSMVSDWNNALKAGFDVELLRWPAW---LLKSELGRRLGHCLPQ--------------VAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSP-LKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIAR 1146
SGVR VV++A +S RW D +EW A LL +IP +R R +RV SGTSASC++V+ + + + R P +Y + L E PE R+A + AP KH TLSGTS+LMK+V WHLE RDE HQAD++SA + + + VSDWNN LK G+D+ L +P W LL LG LG P V PG G VS ++ S PS C VV GTTDS+AAFIAA + PG AVTSLGSTLAIKMLS + VEDA+RGVYSHRLG+ WLVGGASNVGCAVLR EGF ELE LS EI+P L YYPL G GERFP+ DP KK++L PRP R EYL G+L+ IAR
Sbjct: 47 SGVRLVVLEASETPTCVHQASFRWPHSQTVQDAEEWRLAMFRLLDDIPPAIRSRMARVAISGTSASCVVVNKANGA-ITRNPRLYNWDALREIPETGRKAQCLIADYAPAKHVTLSGTSSLMKVVSWHLEEAFHRDEVMLHQADFLSACLIHDTSTAKREQSCFPRVSDWNNMLKLGYDMSALAYPGWFSPLLDDRLG--LGCPSPSESSPSTYRDVLPTHVIEPGQPNGCVSPSLVQSH-GFPSDCTVVGGTTDSVAAFIAAGLQEPGQAVTSLGSTLAIKMLSNKAVEDATRGVYSHRLGNQ-----------------------WLVGGASNVGCAVLRQEGFSNPELERLSQEIDPRRPCRHLNYYPL-AGDAGERFPSCDPSKKALLTPRPPRRSEYLQGILEGIAR 430
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: A0A4D9CXF7_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXF7_9STRA) HSP 1 Score: 297 bits (760), Expect = 1.390e-88 Identity = 192/412 (46.60%), Postives = 233/412 (56.55%), Query Frame = 1
Query: 1 SGVRAVVVDAEGREQ--FGSSLRWA---APDDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTESPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHV-------RGVRGSGSMVSDWNNALKAGFDVELLRWPAW---LLKSELGRRLGHCLPQ--------------VAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSP-LKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIAR 1146
SGVR VV++A +S RW D +EW A LL +IP +R R +RV SGTSASC++V+ + + + R P +Y + L E PE R+A + AP KH TLSGTS+LMK+V WHLE RDE HQAD++SA + + + VSDWNN LK G+D+ L +P W LL LG LG P + PG G VS ++ S PS C VV GTTDS+AAFIAA + PG AVTSLGSTLAIKMLS + VEDA+RGVYSHRLG+ WLVGGASNVGCAVLR EGF ELE LS EI+P L YYPL G GERFP+ DP KK++L PRP R EYL G+L+ IAR
Sbjct: 41 SGVRLVVLEASETPTCVHQASFRWPHSQTVQDAEEWRLAMFRLLDDIPPAIRSRVARVAISGTSASCVVVNKANGA-ITRNPRLYNWDALREIPETGRKAKCLIADYAPAKHVTLSGTSSLMKVVSWHLEEAFHRDEVMLHQADFLSACLIHDASTAKREQSCFPRVSDWNNMLKLGYDMSALAYPGWFSPLLDDRLG--LGCPSPSESSPSTYRDVLPTHIIEPGQPNGCVSPSLVQSH-GFPSDCMVVGGTTDSVAAFIAAGLQEPGQAVTSLGSTLAIKMLSNKAVEDATRGVYSHRLGNQ-----------------------WLVGGASNVGCAVLRQEGFSNPELERLSQEIDPRKPCRHLNYYPL-AGDAGERFPSCDPSKKALLTPRPPRRSEYLQGILEGIAR 424
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: A0A7S0Q2T4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q2T4_9EUKA) HSP 1 Score: 280 bits (716), Expect = 5.530e-87 Identity = 169/391 (43.22%), Postives = 227/391 (58.06%), Query Frame = 1
Query: 1 SGVRAVVVDAEG-REQFGSSLRWAAPD---DPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVD--ANDPSKVMRGPHMYGHNTLTESP-EAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHVRGVRGSGSMVSDWNNALKAGFDVELLRWPAWLLKSELGRRLGHCLPQVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLK--YYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIAR 1146
SG RAV++ A+G R + ++W + +W+ A LL +IP LR R +R+ SGTS++ L+ + + PS P MY + ++P E RAL + AP H + TS L K++ W E+ + DE HQADYV+A + G G+ SDW+NALK GFDV L +P WLL ELG +L LPQV PG + G ++A + +++LPS C V AG+TDSI+AF+A+ G AV+SLGSTLAIK+LSE V+D+SRGVYSHRLG LWLVGGASNVGCAVLR + F ELE LS+ I+ + +P + YYPLP GERFP D + + LEP P R ++LH +L IAR
Sbjct: 42 SGARAVLLAADGTRVGTSADVKWGERERLQTASDWVEALSELLEQIPRDLRARVARIGVSGTSSTVLICERESGSPSVCRGAPRMYDFSVAKQAPGECGARALNLIAAHAPPLHAARAATSTLAKVLAWDAEAALTADEVVAHQADYVAAQLCGRAPDGTFRSDWHNALKLGFDVSSLCYPTWLLAGELGEKLADRLPQVLRPGEAFGGITAAAAE-KWALPSDCIVAAGSTDSISAFLASGAKDVGDAVSSLGSTLAIKLLSEVPVDDSSRGVYSHRLGD-----------------------LWLVGGASNVGCAVLREQDFSDDELEELSVLID-VSSAPAQPDYYPLPAAIVGERFPTADDSRVAKLEPVPASRADFLHSILHGIAR 407
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: A0A0G4H317_VITBC (FGGY_C domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H317_VITBC) HSP 1 Score: 276 bits (706), Expect = 4.170e-85 Identity = 178/417 (42.69%), Postives = 229/417 (54.92%), Query Frame = 1
Query: 1 SGVRAVVVDAEGREQFGSSLRW--------------------AAPDDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTE----SPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHVRGVRGSGSM--VSDWNNALKAGFDVELLRWPAWL----------LKSELGRRLGHCLPQVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIA 1143
SG R V+D + RE F S+RW A DP WL L+ +P+ +R+ + GTSA+ LLVD KV RG +Y + L E +P RA + ++P S TS+ +K + W LE P++ DE HQ D+V A++R G M V+DWNNALK G+D E L +P WL +++ L L LP V PG +G V+A ++SLP+ C+VV+GTTDSIAAF+AA + G AVT+LGSTLAIK+L+ VEDA GVYSHR+ L V G R +L GGASNVGCAVL EGF EL LS +I+P TDSPL YYP+ RG GERFP NDP + L+P+P RKEYLHG+LQ IA
Sbjct: 24 SGCRISVIDGDERELFSDSVRWHQLAASASSSTPTRQPHTDGALAADPSLWLAGLHRLMAAVPVEMRRSMRAIAVDGTSATVLLVDTTT-GKVTRGCRLYNWSALDEDEDEAPAEGPRAWAMAKAVSPPGSPACSPTSSFVKCLTWLLERPLDADEKIAHQCDFVLAYLRSSEEGGPMEVVTDWNNALKIGYDCETLSYPPWLKGHRTAADPSMRATL-ESLFDALPPVVAPGEVLGHVAAGR-VEQWSLPADCRVVSGTTDSIAAFLAAGASRVGDAVTTLGSTLAIKLLTPDPVEDAQAGVYSHRI----PLSVLPPGDRSSSDPTTTDR-CFLAGGASNVGCAVLVDEGFSDDELRQLSAQIDPETDSPLDYYPM-RGV-GERFPFNDPHRVGRLQPKPGTRKEYLHGILQGIA 430
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: B5Y5B6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y5B6_PHATC) HSP 1 Score: 271 bits (694), Expect = 2.380e-83 Identity = 179/395 (45.32%), Postives = 227/395 (57.47%), Query Frame = 1
Query: 25 DAEGREQFGSSLRW--AAPDDPDEWLRAADTLLGEIPLHLR-KRTSRVCFSGTSASCLLVDANDPSKVMRGP-HMYGHNTLTES-------PEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEAFCHQADYVSAHVRGV-RGSGS------MVSDWNNALKAGFDVELLRWPAWLLKSELGRRLGHC-LP-QVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVT--TPGHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAIA 1143
D +E + ++ W A DDP W+ A +LL +R + +C SGTS+SC+LVDA D KV R P MY ++ +T S P RAL+ L+ AP+KHT S TSAL KL+ W+ E P+ E CHQ+DY+S ++ + GS + SDW+N LK G+DV L WP WLL L LP V PG +G +SA + RF LP VV GTTDS AAF AA T PG AVTSLGSTLA+K LS+ VEDAS GVYSHR ++ + + MR+ WLVGGASNVGCA LR + F +L A+S +I+P DS L YYPL + +GERFP D K+ VLEP PE R E+LHG+LQ IA
Sbjct: 48 DRSYKEVYTQAVLWNEGAYDDPKAWMEAVTSLLQSANDDFGLERVASICVSGTSSSCILVDAADGGKVTRSPARMYDYDVVTSSIHTPTQEPVYGVRALQKLQQFAPDKHTCQSPTSALAKLLSWNEEKPLTSSERLCHQSDYISMNLLSSNKACGSNHNNVQVYSDWHNCLKLGYDVRQLSWPPWLLDCLHDAGLAQSVLPFTVVSPGEPMGTISADAAK-RFGLPEHTIVVGGTTDSNAAFFAATGTRTAPGTAVTSLGSTLAMKQLSDTYVEDASCGVYSHRFP---SVLLND---TMRE--------AWLVGGASNVGCAALRQQDFSNEDLVAISAKIDPFVDSNLSYYPLTK--KGERFPIADSTKEPVLEPVPESRNEFLHGILQGIA 425
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: B8C9E7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9E7_THAPS) HSP 1 Score: 264 bits (675), Expect = 2.430e-81 Identity = 166/369 (44.99%), Postives = 220/369 (59.62%), Query Frame = 1
Query: 88 EWLRAADTLLGEIP--LHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTESPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPIERDEA-----FCHQADYVSAHV--RGVRG--SGSMVSDWNNALKAGFDVELLRWPAWLLKS-ELGRRLGH---CLP-QVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTPGH--AVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAI 1140
+W A DTLL +++ R +C SGTSASCLL++ + V R MY ++ S + A R +K ++ PEKHT + T +L KL+ W+ E P+ DE CHQ+DYVS + G+ G S S+ SDW+N LK G+DV L +P+W+L G + LP +V PG +GL+S ++ +++LP +V GTTDS AAF AA PG+ AVTSLGSTLA+K LS+ VEDASRGVYSHR R + ++ WLVGGASNVGCAVLR EGF EL LS +I+P++DSPL YYPL + +GERFP D K+ VL+P+P RKEYLHG+LQ I
Sbjct: 3 DWRAAVDTLLSRAKDSVYMMGRVKAICVSGTSASCLLLERGSLN-VSRVARMYNYDINVSSSDNADRVMKMIDRFVPEKHTARAPTGSLAKLLLWNEEQPLVDDEGNAKEVLCHQSDYVSMSLINGGLEGETSCSVASDWHNCLKLGYDVRSLSYPSWMLDMLREGANISDPDSVLPSKVVSPGEPLGLISPYVAI-KYNLPMDVVLVGGTTDSNAAFFAAAGANPGYGTAVTSLGSTLAMKQLSKTYVEDASRGVYSHRF------------PRFARDDV-ESEEAWLVGGASNVGCAVLRQEGFSNDELSQLSADIDPSSDSPLSYYPLVK--KGERFPVADSEKEPVLDPKPGSRKEYLHGILQGI 354
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Match: A0A7S2PKS0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKS0_9STRA) HSP 1 Score: 265 bits (678), Expect = 8.340e-81 Identity = 169/393 (43.00%), Postives = 223/393 (56.74%), Query Frame = 1
Query: 10 RAVVVDAEGREQFGSSLRWAAP-DDPDEWLRAADTLLGEIPLHLRKRTSRVCFSGTSASCLLVDANDPSKVMRGPHMYGHNTLTESPEAARRALKALEGIAPEKHTTLSGTSALMKLVCWHLESPI-ERD-------EAFCHQADYVSAHVRG---VRGSGSMVSDWNNALKAGFDVELLRWPAWLLK--SELGRRLGHCLPQVAMPGASVGLVSATMSYSRFSLPSSCQVVAGTTDSIAAFIAANVTTP--GHAVTSLGSTLAIKMLSERRVEDASRGVYSHRLGHTGTLRVGEGGSRMRQQEIGNGAGLWLVGGASNVGCAVLRTEGFEPWELEALSIEINPATDSPLKYYPLPRGTRGERFPANDPLKKSVLEPRPEGRKEYLHGLLQAI 1140
RA+ +D E S+ W DD DEW+ A LL +P + + T +C SGTSASC+LV+ KV R P MY ++ S A+ L AP +HT + TS+L KL+ WH E + E D E HQAD+++ H+ R + +VSDW+N LK G+DV L WP+WL SE G L +V PG +G +S +++ SR+ + Q++AGTTDS AAF AA T P G AVTSLGSTLA+K+LS+ EDA GVYSHR + + E+G WL+GGASN GC VLR GF EL+ LS+EI+P SPL+YYPL + +GERFP D K +LEP P RK++LHG+LQAI
Sbjct: 65 RAIEID---NEVHSDSIVWQKSCDDADEWINAMHLLLSRVPTEMLRDTKAICASGTSASCVLVE-KATGKVSRKPRMYDYDVGNSS--FGLNAMDRLGKYAPSRHTAKARTSSLAKLISWHEEEHLYENDDGTNDNAEVLAHQADFLAMHLMSHGTSRKNYEVVSDWHNCLKLGYDVRKLEWPSWLKTCLSEAGISLNVLPSKVVSPGMPIGTISPSLA-SRYDISKDAQIIAGTTDSNAAFFAAAGTCPTFGVAVTSLGSTLAMKVLSKSFCEDADLGVYSHRFP-----------AFTEEHEVGE---AWLIGGASNTGCGVLRQVGFSNDELQYLSMEIDPTEVSPLEYYPLTK--KGERFPIADSEKLPILEPVPASRKDFLHGILQAI 434 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20100.5663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20100.5663.1 >prot_H-elongata_contig20100.5663.1 ID=prot_H-elongata_contig20100.5663.1|Name=mRNA_H-elongata_contig20100.5663.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=382bp SGVRAVVVDAEGREQFGSSLRWAAPDDPDEWLRAADTLLGEIPLHLRKRTback to top mRNA from alignment at H-elongata_contig20100:1269..6817+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20100.5663.1 ID=mRNA_H-elongata_contig20100.5663.1|Name=mRNA_H-elongata_contig20100.5663.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5549bp|location=Sequence derived from alignment at H-elongata_contig20100:1269..6817+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20100:1269..6817+ >mRNA_H-elongata_contig20100.5663.1 ID=mRNA_H-elongata_contig20100.5663.1|Name=mRNA_H-elongata_contig20100.5663.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2292bp|location=Sequence derived from alignment at H-elongata_contig20100:1269..6817+ (Himanthalia elongata Himel1 dioecious)back to top |