mRNA_H-elongata_contig20092.5660.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: D7G2M9_ECTSI (Indole-3-glycerol-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M9_ECTSI) HSP 1 Score: 469 bits (1208), Expect = 3.050e-163 Identity = 245/324 (75.62%), Postives = 266/324 (82.10%), Query Frame = 1
Query: 1 STMTRMAVYNPNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTAAELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGTKPPPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLVAGGRQSPSGPELISGIVTRVGVPRNMLGWGLKAEDLDMD 972
+T T YNPNDELRAIVQRKQ E KSLLA HTA DDRLQ MRL YGASES Y LR ALRRNKGQ+Q+H V+VADMKRRSPT+AELPPDVNAFDD W SQL+ AGA VLMVNTDGPAWGG+LSDL+ VVAHFK G PPPIV KDVIVHP+QMAQALEKGAA TVLIACVLGP L DFM+ AT MGTE IVEVHTPAE EKALEHGA VIMVNNWDRITGKLYPKQA A+R++IPDQ+LTIASG I+++EQA L+DEGYDAVVLGRSLV+G SGPELI GIV RVGVPR+MLGWG+KAEDLD D
Sbjct: 75 ATTTMGIAYNPNDELRAIVQRKQHETKSLLAAHTASDDRLQ-----------MRLSYGASESCYALRSALRRNKGQEQDHQAVVVADMKRRSPTSAELPPDVNAFDDPAAWASQLHTAGASVLMVNTDGPAWGGSLSDLDKVVAHFKKLGKTPPPIVAKDVIVHPMQMAQALEKGAAGTVLIACVLGPALCDFMDAATMMGTECIVEVHTPAEVEKALEHGASVIMVNNWDRITGKLYPKQAKAVRHLIPDQVLTIASGGIDSVEQAGRLTDEGYDAVVLGRSLVSGA----SGPELIRGIVDRVGVPRSMLGWGVKAEDLDYD 383
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: A0A7S2BZD9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZD9_9STRA) HSP 1 Score: 223 bits (568), Expect = 5.200e-67 Identity = 137/318 (43.08%), Postives = 185/318 (58.18%), Query Frame = 1
Query: 34 NDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTAAELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGTKP---------PPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLVAGGRQSPSGPELISGIVTRVGVPRNMLGWGLKAED 960
ND + ++ RK+ EV+ L H+A +D ++ +RL Y A +SS+ + ALR+ K D+ MTVL AD+KR SPT+ LP V+ F+DAG +L + G MVNTD WGG++ DL +VV+ K P +VMKD+I+ PIQ+A ALE GA VL+A V+G L + M AT MGTEAIVEVHTP E A++ GA +IMVNNWDR TG +P QALA+R IPD I+TIA+G + + +QA L+D GYD V LGR+L P L+ I P ++ GW +D
Sbjct: 46 NDLILEVIHRKKYEVQQLEQKHSAPNDPVK-----------LRLGYVAEQSSFRVTRALRKYKLGDERPMTVL-ADLKRTSPTSRALPRTVSGFNDAGRRTEELMNFGVTATMVNTDELGWGGSMDDLSSVVSKVKAMEKLPGKTGEMANMTAVVMKDLIIDPIQIAVALESGAHGVVLLANVVGQALEELMEAATCMGTEAIVEVHTPNEARNAVDLGASIIMVNNWDRATGTWHPDQALAVRGQIPDHIVTIATGGLASSDQARRLADVGYDCVALGRALAV----HPQPSRLVRNIRAHR-APPSIPGWNGPRDD 346
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: A0A7S2RG86_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG86_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.340e-60 Identity = 125/281 (44.48%), Postives = 170/281 (60.50%), Query Frame = 1
Query: 34 NDELRA-IVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTAAELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGTKPPP-----IVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLVA 858
N+EL +++RK+ EV+ L IH D + +R + + SSY L ALR ++ D ++V+ D+KR SPT+ LP V+ F DAG + + G VL VNTD WGG L DL +VV K P +VMKD+I+HPIQ+A+ALE+GA +L A +LG L ++ AT MGTEAIVEVHTP EC+ ALE GA ++MVNNWDR GK + QA +R +IPD ++TIA+G I++ E+AT L+ GYD V LGR+L A
Sbjct: 70 NEELMLQLLERKKYEVRQLEKIHKDMADPVN-----------LRQGFISDTSSYTLTRALRLSRLGDTRKISVM-GDLKRLSPTSKNLPRTVSGFVDAGRRARECLELGVNVLSVNTDQAGWGGKLDDLNSVVQARKDYAKNIDPSNHTAVVMKDLIIHPIQIAEALERGANGVILQAGLLGAQLGPLLDAATIMGTEAIVEVHTPNECDYALELGAMILMVNNWDRTDGKWHRNQAECVREVIPDNVVTIAAGGISSSEEATRLAAIGYDCVCLGRALAA 338
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: W7TXI0_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXI0_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.140e-58 Identity = 126/304 (41.45%), Postives = 174/304 (57.24%), Query Frame = 1
Query: 55 VQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTAAELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKT-RGTKPPPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLVAGGRQSPSGPELISGIVTRVGVPRNMLGWGLKAEDL 963
VQRK EV+ L T + RL L RL+ Y + AL+R+ G+ Q H+ ++A++KRR+PT P ++ A D G+ QL D GA VLMV TD +GG++ DL + F K PPIV KD+ +HP+Q++QA+E GA +L+A ++G +L ++ T +G EA+VEVHT AE EKALE GA I+ NWDRI LY QA L+ MIPD I+ I +G + T++ A L+D GYDAV+LGR L S IS I +R +P + G G+ AEDL
Sbjct: 77 VQRKNYEVQQLR--ETEEGSRL-----------LARLRSVNLVGGYRVARALKRSTGE-QVHVMSVIAEIKRRTPTGDTTPTELAAIADVGLVARQLADCGADVLMVTTDETCYGGSIMDLRSAREAFADIPDEKRPPIVAKDIYIHPLQISQAMEHGADGVLLMASLMGASLSGLLDACTCLGLEALVEVHTVAELEKALELGATNIVATNWDRIENALYKDQAKGLKGMIPDLIVAICAGDVGTVDDAAELADMGYDAVILGRGLAT----SADITRFISSIRSRESMPSLLTGAGMMAEDL 362
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: A0A7S0SWD0_9STRA (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWD0_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.040e-50 Identity = 105/264 (39.77%), Postives = 157/264 (59.47%), Query Frame = 1
Query: 28 NPNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTAAELPPDVNAFDDAGV--WGSQLYDAGARVLMVNTDGPAWGGNLSDL-EAVVAHFKTRGTKPPPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATAL 810
+P L+ +V RK++EV +LL H DD L +MR+ Y ASE+ + + ++L+R+ + H ++ D+KR+SPT +P + N D + + L AG ++NTD +GG LSD+ E+ A R KPP + KD+I+HP+Q+AQAL+ GA+ ++I V+G L ++ T MGTEA+VEVHTP E E AL GA + +VN WDR+TGKLYP QA L +M+P + IA+G+IN ++Q L
Sbjct: 2 SPGAYLQRMVDRKKIEVDNLLRRHQEPDDPL-----------VMRMSYMASENKFNVTNSLKRDATINNQHTISILIDLKRKSPT---IPNNRNIIDFSSTSKFSELLTVAGVDGFLINTDELEYGGRLSDIKESSKAVKAIRPNKPPVCICKDIIIHPVQIAQALQAGASGILIIMAVVGSDLEVLLDACTIMGTEAVVEVHTPNELEYALSKGATIFLVNMWDRLTGKLYPDQAKGLVSMMPMNSIAIAAGNINNIDQVIEL 251
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: A0A7S1TYS9_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYS9_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.670e-50 Identity = 124/322 (38.51%), Postives = 174/322 (54.04%), Query Frame = 1
Query: 1 STMTRMAVYNPNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTAAELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGT-KPPPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQI--LTIASGSI------NTMEQATALSDEGYDAVVLGRSLVAGGRQSPSGPELISGIVTRVGVPRNMLG 939
+T MA + L VQRK+ EV+ L H ++ D +RL+ G ++ L+ R + D+ ++V D+KR SPT P V F DAG + L DAG ++VNTD ++GG+++DL+A VA K + P IVMKD+I+ PIQ+A A E GA A L+ACV GP L D M+ AT MG EAIVEVHTP E + A+ GA + + NWDR GKL P A LRN +PD + + +A+G + + ++A A+ + G+D VV GR + Q L+ I R G+PR MLG
Sbjct: 42 ATSLHMARGDAGARLLEQVQRKRYEVQQLYREH-------------DDATDPIRLRMGYMSQNFTLQATSRIRRQGDELRLSVCY-DLKRFSPTGVR-PAQVVGFADAGQMAATLADAGVDAILVNTDFNSYGGDVADLKAAVAATKDLPEERRPAIVMKDIIIDPIQVAVAAEAGADAVYLMACVAGPVLEDLMDAATVMGIEAIVEVHTPNEAKYAMSCGATLFALTNWDRPEGKLIPLHAAKLRNFLPDGVGCVALATGGLFMGDAADPADEAMAIGEMGFDGVVAGRGMA----QWKDVTGLVKAIRAREGLPRVMLG 344
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: A0A0G4F0L6_VITBC (Indole-3-glycerol-phosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0L6_VITBC) HSP 1 Score: 176 bits (446), Expect = 5.530e-49 Identity = 110/311 (35.37%), Postives = 166/311 (53.38%), Query Frame = 1
Query: 31 PNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQ-DQNHMTVLVADMKRRSPTAAELPPD-VNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGTK---PPPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLVAGGRQSPSGPELISGIVTRVGVPRNMLGWGL 948
P D +++ K+ EVK L+ H++D D L +MRL+Y S + + ++LR + D H ++AD+KR SPT + V ++ DA L + G + VNTD WGG+ D+ + F+ RG + P I+ KD+++HP+QMA A+E GA VL + +LG + M A MG E +VEVHT E + A++ GA +IMVN WDR+ G+L P QA LR+ I +++TI +G I +Q + + GYD+VVLGR L P+L+ + G PR L G+
Sbjct: 25 PWDMFARMIEAKKAEVKRLVEEHSSDMDPL-----------MMRLQYVRSPVNIKISESLRPPRNDSDFCHKLTMIADLKRESPTHPDPSQRRVLSYSDASEMACALTNMGFDAIFVNTDQSFWGGSYDDIRKIKEEFRVRGVRFSERPAIIAKDLMLHPLQMAYAVEMGADGVVLNSLLLGQDMEHMMEAAIVMGCETVVEVHTQQEADDAVKQGANIIMVNQWDRVDGRLSPLQAGKLRDRIHPEVITIVAGGIQDYKQISDIGMLGYDSVVLGRKLA-----DEDVPQLVDRVRAWEGPPRLTLTMGM 319
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: J4DP27_THEOR (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria orientalis TaxID=68886 RepID=J4DP27_THEOR) HSP 1 Score: 178 bits (451), Expect = 1.560e-47 Identity = 109/279 (39.07%), Postives = 156/279 (55.91%), Query Frame = 1
Query: 25 YNPNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTA-AELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGTKP-PPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLV 855
Y + ++ K EV L+ H+ +D LQ +RL + S+ L D LRRN Q ++H ++ADMKRR+PT +V ++ +AG G + G ++ VNTD +GG+++DL + G + P IVMKD+I+HPIQ+AQA E A +L A +LG L D + TMG EAI EVHT AE K+++ G IMVN WDRI LYP +AL ++ +P+ + IA+G I TM+Q L+ GYDA+VLGR L+
Sbjct: 74 YVAEERFYKMITDKYSEVDKLIEGHSDPNDNLQ-----------LRLNFLQCTSNLKLSDMLRRNSNQ-KHHKLSVIADMKRRTPTHNPTCDNNVLSYSNAGEVGLSMASVGFDIIFVNTDEVNYGGHINDLYKTFLELRKLGRRERPAIVMKDIILHPIQIAQAAELRADGVILNAAILGKVLGDLLGTCVTMGIEAIAEVHTVAEALKSIDMGFTHIMVNQWDRIKNVLYPTRALEVKEALPENVTAIAAGGIMTMDQVHQLALAGYDAIVLGRRLI 340
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: Q4UDX1_THEAN (Indole-3-glycerol-phosphate synthase n=2 Tax=Theileria annulata TaxID=5874 RepID=Q4UDX1_THEAN) HSP 1 Score: 177 bits (448), Expect = 6.200e-47 Identity = 115/306 (37.58%), Postives = 165/306 (53.92%), Query Frame = 1
Query: 25 YNPNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTA-AELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRG-TKPPPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLVAGGRQSPSGPELISGIVTRVGVPRNML 936
Y P + ++ K EV L+ H +D+LQ +RL Y S+ L D L RN + +H ++ADMKRR+PT +V ++ DAG + G V+ VN D +GG+++DL V + + G T+ P IVMKD+I+HPIQ+AQA+E A +L A +LG L D + TMG EAIVEVHT A+ ++ E G M+N WDRI LYP +AL ++ ++P+ TIA+G I TMEQ L+ G DAV GR LV P P+ I+ + + G + +L
Sbjct: 94 YYPEERFYKMITDKYSEVDQLIEQHKDQNDKLQ-----------LRLNYLQCTSNLKLSDMLSRN-SNNTHHKLCVIADMKRRTPTHNPRCDNNVLSYTDAGEVALNMASVGFDVIFVNVDQKNYGGHINDLNKVFLNLRKLGRTQRPAIVMKDIILHPIQIAQAVEMRADGVILNAAILGNALKDLLTSCITMGIEAIVEVHTTADALRSAEIGFTNFMINQWDRIKNILYPTRALEIKEVLPEYATTIAAGGIMTMEQVHMLALAGIDAVCFGRRLVY-----PDVPDFINQVKSWKGPSKPIL 382
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Match: A0A2T7I7S8_THEOR (Indole-3-glycerol-phosphate synthase n=1 Tax=Theileria orientalis TaxID=68886 RepID=A0A2T7I7S8_THEOR) HSP 1 Score: 177 bits (449), Expect = 4.790e-46 Identity = 108/270 (40.00%), Postives = 154/270 (57.04%), Query Frame = 1
Query: 52 IVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLMRLKYGASESSYVLRDALRRNKGQDQNHMTVLVADMKRRSPTA-AELPPDVNAFDDAGVWGSQLYDAGARVLMVNTDGPAWGGNLSDLEAVVAHFKTRGTKP-PPIVMKDVIVHPIQMAQALEKGAAATVLIACVLGPTLIDFMNVATTMGTEAIVEVHTPAECEKALEHGAGVIMVNNWDRITGKLYPKQALALRNMIPDQILTIASGSINTMEQATALSDEGYDAVVLGRSLV 855
++ K EV L+ H+ +D LQ +RL + S+ L D LRRN Q ++H ++ADMKRR+PT +V ++ +AG G + G ++ VNTD +GG+++DL + G + P IVMKD+I+HPIQ+AQA E A +L A +LG L D + TMG EAI EVHT AE K+++ G IMVN WDRI LYP +AL ++ +P+ + IA+G I TM+Q L+ GYDA+VLGR L+
Sbjct: 1 MITDKYSEVDKLIEGHSDPNDNLQ-----------LRLNFLQCTSNLKLSDMLRRNSNQ-KHHKLSVIADMKRRTPTHNPTCDNNVLSYSNAGEVGLSMASVGFDIIFVNTDEVNYGGHINDLYKTFLELRKLGRRERPAIVMKDIILHPIQIAQAAELRADGVILNAAILGKVLGDLLGTCVTMGIEAIAEVHTVAEALKSIDMGFTHIMVNQWDRIKNVLYPTRALEVKEALPENVTAIAAGGIMTMDQVHQLALAGYDAIVLGRRLI 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20092.5660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20092.5660.1 >prot_H-elongata_contig20092.5660.1 ID=prot_H-elongata_contig20092.5660.1|Name=mRNA_H-elongata_contig20092.5660.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=326bp MTRMAVYNPNDELRAIVQRKQLEVKSLLAIHTADDDRLQASTRPEEDLDLback to top mRNA from alignment at H-elongata_contig20092:2217..6964+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20092.5660.1 ID=mRNA_H-elongata_contig20092.5660.1|Name=mRNA_H-elongata_contig20092.5660.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4748bp|location=Sequence derived from alignment at H-elongata_contig20092:2217..6964+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20092:2217..6964+ >mRNA_H-elongata_contig20092.5660.1 ID=mRNA_H-elongata_contig20092.5660.1|Name=mRNA_H-elongata_contig20092.5660.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1956bp|location=Sequence derived from alignment at H-elongata_contig20092:2217..6964+ (Himanthalia elongata Himel1 dioecious)back to top |