mRNA_H-elongata_contig20032.5641.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20032.5641.1
Unique NamemRNA_H-elongata_contig20032.5641.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: D8LC30_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC30_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 4.260e-54
Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = 1
Query:  280 SRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYL 783
            S GMVST+EQL +L FCAAVF E +R+RTP P LS TC ED T +SG  ++KG  V+ LNR   ISED FTRG EFVPERWI SER +AL  K +    +  I H +EAFL+ G GPR+CPG+D+AKAE   IIAAIC+RFD+SLAPGQ DPPEE + FT GPK   +
Sbjct:  386 SDGMVSTAEQLKRLRFCAAVFKEALRLRTPAPRLSFTCTEDFTMKSGRVLKKGTAVLTLNRAVGISEDFFTRGDEFVPERWISSEREKALSEKQSTWIGKGGISHEEEAFLSMGHGPRICPGQDMAKAEGAIIIAAICARFDLSLAPGQADPPEEYSSFTCGPKEFNM 553          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 7.360e-29
Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 1
Query:  397 EDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLK 798
            E  T +SGLK+E G    +L R+  +SE +FTR  +FVPERWI++ER EALLG+     +   + H +E   AFG GPR CPG D+A  EA  I+AAI +RFD++LAPGQ DPPEE+ +FT G +++ L    K
Sbjct:  396 ETTTMKSGLKLEAGTAFTLLLRYPCLSEHSFTRAKDFVPERWIDAEREEALLGQPADR-KSSDVVHREEVAQAFGGGPRKCPGMDMAHLEAAIILAAISARFDLALAPGQADPPEEVFKFTAGVESLKLVLTKK 528          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: UPI0012BC3AC0 (cytochrome P450 n=1 Tax=Xanthovirga aplysinae TaxID=2529853 RepID=UPI0012BC3AC0)

HSP 1 Score: 92.8 bits (229), Expect = 3.150e-16
Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 1
Query:  271 VVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIH--HADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAE---FTVGPKAMYLKFK 792
            + PS       E +++L +  AV +E +R++   P L    LED T  +    ++G  +++ N+ A  S+DNF    +F+PERW+++                  +H  H  E   AFGSGPR CPGK+LA  E    ++ IC  FD+ L    +  PE++ E   FT+ P+ ++L+FK
Sbjct:  417 IFPSTSHPVDYEMINRLKYTEAVAMEAIRLKPVTPNLYFQALED-TQINNFLFKQGTTIMMQNKVAQTSDDNFAEAGKFIPERWLKT---------------GCPVHGAHKPEMIKAFGSGPRFCPGKNLAMHEMIMSLSMICKNFDLEL----VVKPEKVKEIFAFTMYPENLWLRFK 575          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A7X3XGU1_9SYNE (Cytochrome P450 n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A7X3XGU1_9SYNE)

HSP 1 Score: 90.9 bits (224), Expect = 9.890e-16
Identity = 59/191 (30.89%), Postives = 97/191 (50.79%), Query Frame = 1
Query:  271 VVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLKESSNAEL*GSK*ITG 843
            +V     + T EQ S L F  A   EV+R++   P ++   LED T   G  + KG  + VL R+ +  E++F  G  F PERW+               G E+  HHA +AF+ FG+GPR+CPG++LA  E   ++A +C  F++       +  E++A   + P  ++L+ K +  +++   G+   TG
Sbjct:  315 LVAPAAALDTLEQASHLPFLDAFCNEVMRLKPVAPNMALETLED-TEMLGCLMPKGTKLFVLLRYVATREEHFAGGDRFDPERWLPRPA-----------GREQQPHHA-QAFVPFGAGPRICPGRNLAMLEIRTVLAMLCRNFELEPVSPAKEAKEKMA-VVMRPDHLHLRLKRRSLNSSGPAGAATATG 491          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A7X3YR80_9SYNE (Cytochrome P450 n=4 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A7X3YR80_9SYNE)

HSP 1 Score: 90.9 bits (224), Expect = 1.190e-15
Identity = 55/180 (30.56%), Postives = 94/180 (52.22%), Query Frame = 1
Query:  268 DVVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAE---FTVGPKAMYLKFKLK 798
            D++     +   EQ ++L F  A   EV+R++   P ++   LED T   G ++ KG  + VL R+ +  E++F  G  F PERW         L + T NG++    H  +AF+ FG+GPR+CPG++LA  E   ++A +C  FD+      ++P  E+ E     + P  ++++ K +
Sbjct:  350 DLIGPAAALDELEQANRLPFLDAFCNEVMRLKPAAPHMALEALED-TEMLGCRLPKGTKLFVLLRYTATREEHFAGGDRFDPERW---------LPRPTGNGKQP---HNTQAFVPFGAGPRICPGRNLAMLEIRTVLAMLCRNFDLE----PVNPGREVREKMAVVMRPDQLHVRLKRR 512          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A158BQM1_9BURK (Cytochrome P450-like protein n=1 Tax=Caballeronia hypogeia TaxID=1777140 RepID=A0A158BQM1_9BURK)

HSP 1 Score: 87.0 bits (214), Expect = 1.650e-14
Identity = 54/178 (30.34%), Postives = 84/178 (47.19%), Query Frame = 1
Query:  268 DVVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLKE 801
            DV+    +  T   + +L  C AV  E  R+    P+LS   LE+   + G+++  G  + +LNR A +   NF   A + P+RW+   R           G      H   A+L FG+GPRVCPG+ LA  E   +++ + + F   LA    D   E+  FT  P AM ++  L++
Sbjct:  323 DVIGDAAVCPTYGAMRELDLCEAVCTEASRLHPIAPYLSFEPLEEVRLQ-GVRLPAGTKMFMLNRPAMMDPKNFADPARYDPDRWLHEHRHPV-------EGAPEHGPHEQRAYLQFGAGPRVCPGRHLAVVEMRLVVSMLAANFTAQLATNPADI-HEVCTFTSVPSAMPVRLALRQ 491          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: R7UEK1_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UEK1_CAPTE)

HSP 1 Score: 80.5 bits (197), Expect = 1.890e-14
Identity = 50/148 (33.78%), Postives = 70/148 (47.30%), Query Frame = 1
Query:  307 QLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIA 750
            +L +L    A+  E +R++  GP L  TCL+D T    + I KG  +I LN +A      F     F P+RW+  E+ +                H+ E  + FGSGPR CPG+ LA  E  A +A IC  FD  L     D  EE++
Sbjct:    1 ELDKLPLMDAIIQETLRLKPVGPLLYLTCLQD-TRVGDVLITKGTSLITLNEYAGKRNQWFHHAETFNPQRWLNPEQFQP---------------HSPETMIPFGSGPRFCPGRQLALMEIKATMAMICHYFDWQLVTSVEDIKEELS 132          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A9GM12_SORC5 (Putative cytochrome P450 CYP261A1 n=1 Tax=Sorangium cellulosum (strain So ce56) TaxID=448385 RepID=A9GM12_SORC5)

HSP 1 Score: 86.3 bits (212), Expect = 2.790e-14
Identity = 55/162 (33.95%), Postives = 84/162 (51.85%), Query Frame = 1
Query:  304 EQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKF 789
            E   +L +  AV  E +R+++  P L      D T    L++  G  +I+L R  ++ E++F   A F+PERW+    A A  GK           H   A LAFGSGPRVCPG+ L+  E+  + A +   FDVSL      P +E+  FT+ P+ ++++F
Sbjct:  331 EHAQRLRYLGAVAQETLRLKSAAPILFMEACAD-TVVGSLRLAAGTRMILLTRQIALKEEHFHDAASFMPERWLTPRPAGA--GK-----------HDPRAALAFGSGPRVCPGRALSMVESAMVGAMVARDFDVSLV-DPARPVKELLGFTMKPEGLFVRF 477          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: UPI0015656D9A (cytochrome P450 n=1 Tax=Paraburkholderia sp. NMBU_R16 TaxID=2698676 RepID=UPI0015656D9A)

HSP 1 Score: 86.3 bits (212), Expect = 3.960e-14
Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = 1
Query:  271 VVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLKE 801
            V+ +  +++   Q  +L +  AV  E +R++   PFL    L D   + G+ + KG  +I+L R+ ++ E ++ R   F P+RWI                E  +    D  F+AFGSGPR CPG++LA  E    IA +C  F +S++P      E ++ FT+ P  + L F  ++
Sbjct:  441 VLGTEKLLTDPGQADKLTYIDAVANETMRLKPVAPFLVVEPLNDVELD-GVSVPKGTIIILLTRYPNLLEQHYVRAQTFDPDRWI---------------AEGENALPRDARFVAFGSGPRYCPGRNLAMLEIKCAIAMLCRNFHLSVSPACASVEERLS-FTMMPHGLRLNFVTRD 600          
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A4P2PSV2_SORCE (Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2PSV2_SORCE)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-14
Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 1
Query:  304 EQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKF 789
            E   +L +  AV  E +R+++  P L      D TT   +++  G  +IVL R   + E++F   A FVPERW+    A A  GK           H   A LAFGSGPRVCPG+ L+  E+  + A +   FDVSLA     P +E+  FT+ P+ + ++F
Sbjct:  331 EHAQRLRYLGAVAHETLRLKSAAPVLFLEACAD-TTLGPVRLAAGARMIVLMRQVGLKEESFHDAASFVPERWLTPRPAGA--GK-----------HDPRAALAFGSGPRVCPGRALSLIESAMVGAMVARDFDVSLA-DPARPVKELFGFTMKPEGLVVRF 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC30_ECTSI4.260e-5460.71Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
D7FPK1_ECTSI7.360e-2949.25Cytochrome P450 n=1 Tax=Ectocarpus siliculosus Tax... [more]
UPI0012BC3AC03.150e-1631.84cytochrome P450 n=1 Tax=Xanthovirga aplysinae TaxI... [more]
A0A7X3XGU1_9SYNE9.890e-1630.89Cytochrome P450 n=2 Tax=unclassified Synechococcus... [more]
A0A7X3YR80_9SYNE1.190e-1530.56Cytochrome P450 n=4 Tax=unclassified Synechococcus... [more]
A0A158BQM1_9BURK1.650e-1430.34Cytochrome P450-like protein n=1 Tax=Caballeronia ... [more]
R7UEK1_CAPTE1.890e-1433.78Uncharacterized protein (Fragment) n=1 Tax=Capitel... [more]
A9GM12_SORC52.790e-1433.95Putative cytochrome P450 CYP261A1 n=1 Tax=Sorangiu... [more]
UPI0015656D9A3.960e-1429.94cytochrome P450 n=1 Tax=Paraburkholderia sp. NMBU_... [more]
A0A4P2PSV2_SORCE6.600e-1435.80Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20032contigH-elongata_contig20032:63..3107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.4
Seed ortholog evalue2.9e-48
Seed eggNOG ortholog2880.D8LC30
KEGG koko:K15388,ko:K21446
EggNOG free text desc.iron ion binding
EggNOG OGsCOG2124@1,KOG0158@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01008
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncytochrome P450
Ec32 orthologEc-20_004230.1
Exons5
Model size1597
Cds size534
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930128.217937-UTR-H-elongata_contig20032:62..8371622930128.217937-UTR-H-elongata_contig20032:62..837Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20032 63..837 -
1691679291.8629987-UTR-H-elongata_contig20032:62..8371691679291.8629987-UTR-H-elongata_contig20032:62..837Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20032 63..837 -
1622930128.309332-UTR-H-elongata_contig20032:2819..31071622930128.309332-UTR-H-elongata_contig20032:2819..3107Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20032 2820..3107 -
1691679291.9241743-UTR-H-elongata_contig20032:2819..31071691679291.9241743-UTR-H-elongata_contig20032:2819..3107Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig20032 2820..3107 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930128.2341747-CDS-H-elongata_contig20032:837..9331622930128.2341747-CDS-H-elongata_contig20032:837..933Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 838..933 -
1691679291.8768995-CDS-H-elongata_contig20032:837..9331691679291.8768995-CDS-H-elongata_contig20032:837..933Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 838..933 -
1622930128.2481341-CDS-H-elongata_contig20032:1361..14391622930128.2481341-CDS-H-elongata_contig20032:1361..1439Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 1362..1439 -
1691679291.8855798-CDS-H-elongata_contig20032:1361..14391691679291.8855798-CDS-H-elongata_contig20032:1361..1439Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 1362..1439 -
1622930128.2603288-CDS-H-elongata_contig20032:1664..17941622930128.2603288-CDS-H-elongata_contig20032:1664..1794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 1665..1794 -
1691679291.8941734-CDS-H-elongata_contig20032:1664..17941691679291.8941734-CDS-H-elongata_contig20032:1664..1794Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 1665..1794 -
1622930128.2724247-CDS-H-elongata_contig20032:2233..23551622930128.2724247-CDS-H-elongata_contig20032:2233..2355Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 2234..2355 -
1691679291.9032042-CDS-H-elongata_contig20032:2233..23551691679291.9032042-CDS-H-elongata_contig20032:2233..2355Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 2234..2355 -
1622930128.29025-CDS-H-elongata_contig20032:2711..28191622930128.29025-CDS-H-elongata_contig20032:2711..2819Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 2712..2819 -
1691679291.9118595-CDS-H-elongata_contig20032:2711..28191691679291.9118595-CDS-H-elongata_contig20032:2711..2819Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20032 2712..2819 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20032.5641.1prot_H-elongata_contig20032.5641.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20032 838..2819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20032.5641.1

>prot_H-elongata_contig20032.5641.1 ID=prot_H-elongata_contig20032.5641.1|Name=mRNA_H-elongata_contig20032.5641.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKG
RGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSI
HHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPP
EEIAEFTVGPKAMYLKFKLKESSNAEL*
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mRNA from alignment at H-elongata_contig20032:63..3107-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20032.5641.1 ID=mRNA_H-elongata_contig20032.5641.1|Name=mRNA_H-elongata_contig20032.5641.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3045bp|location=Sequence derived from alignment at H-elongata_contig20032:63..3107- (Himanthalia elongata Himel1 dioecious)
GCACCGTCGAGGTGTGGAGAAAAATACTCCACACGCGGTCCGCTGAATCC GATACCGCGTCGGTTTGTCGGCTCCGGTTAGCGTCGGTATCGTACGGAGT CTCTTCGTATAGAGAGCATTGTGGCATTCGCGCCCGCGGATCGTGTAGGA GCTGCCACTGCTGCACGCAAATATTCATTTAATCATTGTTGGCCTCAGCC ATCTAGACCAGATTGCTTACCATCACATGTCGCTGATCTTTGCCAACACT CCCCCGGCCTCCCAACCGACGTTGTTCCAAGTCGTGGAATGGTGTCAACC TCGGAACAACTGTCCCAGCTGGTATTTTGCGCCGCGGTGTTTCTGGAGGT GGTCAGAATGAGGACGCCGGGACCTTTTCTCTCCCACACTTGCTTGGTAC GCACGAACAGTGTATAGTTATATGTGGTCTCGGAGTCTATAGCTCTCTAT CACGTGTGAAACGGTGTTCCACGCAGCATCGACTAGATCCGCTGAAGGGG AAGAGTCGCGAGCGTTATTTCCCATTGGTTTGAACAGTACACAAGTTGTC ATAGCTTTGGGTATCATATATTTAACGCCCGCGCTTCCTTCGATGCAGTG TTCATCGTGTTCATCTTCCCTACATCGGGATACTGCGCGATTCCTAACTT GCCCTTGTTTTCTTTGCTTTTATCGAATTATCATTATCATATCGCCGTAT CCCGATACATGATCTACCTTTTTTAATGTGGTATAATACTGGTACAAAAT AGGAGGACCATACGACGGAAAGCGGTTTGAAGATTGAGAAAGGAAGGGGT GTTATTGTCCTTAATCGGTTCGCCAGTATCTCTGAAGACAACTTCACGAG GGGTGCGGAGTTCGTGCCCGAGAGGTGGGCGGAGTGAAGAGAAAGAGCCA CCATCGTGCCGAACTCAAAATGTTGCATTACACTCGAGTACCAAATTATG AGGGGCAATGTTGGGGGAACGAGACTCCTTCAGAGGAAAATGATAAATAA TTGGTGCCCGGTGAAGCTGGTTGTGCGGGCAGCACCTCGATCGGTGGAAG TACACACATATGGTTGCACTACGATATAAATTTATCTGGCTACGCATAGA CGTACTCACTATCCTTTATTGTCGGGGTGTTAGGCTAACTCACTCGAATG TGATGAATCGCATCGTTCAAACAGCCCGACGAATGCGTAACGCAACTGTT CAGGGCGTAGTCCCTGTCCAACAAATATATAAACCTAATCACAATGCGGC AACCGCTTATATTTCTCCCTAACTCTATGACCACATGTTACGCCACGTGG GAACCATTCAAAGGTGGATCGAATCCGAGCGCGCCGAGGCTTTGCTGGGC AAGGGCACACGGAATGGCGAGGAACGCAGCATCCACCACGCGGATGAAGC CTTCCTGGCGTTCGGCAGCGGACCGCGGGTGTGCCCCGGAAAGGTACCGA TTGACGCGCCGCGTCAATTTATCCGCTGTGTCAAGTTGTACCCTGTCCAG CCGCTTTGCTCTCCTGCGCACGATGCGATACCAGTAGAGATAGGTTACCT TCTACGTTCGTTCTACATGTCCCGCTACCACTTCAGTCCATTATTTCTAA TATTTTGGAGTGAACAAACCATGTTCCGCCTTTCGTTGGGTATCTCGGTC GGGGGGTGAACGTTGTAGGACCTGGCAAAGGCGGAGGCAACAGCAATCAT CGCCGCGATCTGCTCACGCTTCGACGTCTCGCTCGCTCCTGGTCAGGTGA CCCTATTTAGTGTACCATAGTCCCGTCCTCGCATTAGGTCCACCTAGCAC ATCTGTCCTGTGATTTTTACCTGTCGATGTGTCAACTCTTTTCGCCGAAT TTAAGCACCTCTTCATGATATTTACTCCATAGCTTCGTCGTAGTGCCATG CAAATCTGGAAACATACACCCTTAACACCGCATGCTTAATGCGCGCTCGG AGTTCGTAAATATTCTGCATACGGTGCTTTTGTCCTCGCTTCCGGGAACC GTGCCCTGCTCGAAGTCGTTGTGAAACATCAGTTAGGTGACTTTACCAAG AGCAACTCAAAGCTGTCTGAAAACAAAGGCGCATGGAAGACGCGCACACG CCTCATATCTCCTTTAAATCAATGTATTTCCCTCTAATGACCCTCTTTGC TTGCTCAATACCTGTTTCGAGAAGCTCGACCCGCCGGAGGAGATAGCGGA GTTCACTGTCGGGCCAAAGGCGATGTACTTGAAATTCAAACTAAAAGAGA GTTCTAACGCAGAACTCTAGGGTTCAAAGTAAATAACGGGGGAGGGAGTG GAGCGGCAGGATATTAGCTAGTCCCAAGGAACCGACTCCTACCCTACCGA TTTAGGCAAAACCATCGGTTCTTCGCAGCTACATCGACAACAACGGGATT TGAACAATTGGGGTGGGCGAGGAGGTCAGAAGTCCCCAGAACACCGCGAG TAATTATTTGCGTGTACATGTTCTTCAGGAATTTCCGGGCCAAAAGCAAG GTTGATCGCATGTCCTCTTGCTGAAGAGTGTGTCTAATTCGTTTGTGGAT ATTGTTGGCACTCTCGAACGATGTATAGTATCTTGTAATCGGCATCGATT GATCGGGTGTTGAACTGCAGTCAACAACGCTAATTAACTTGGAAGCTGAT TCTTTCACAGGCAACATGCGCGTTTTGAATGGCTTCACTTTCTATTGTGA ACGACTCATTGCAACACATCGGCGCCACACCATGAACTGAATAGAAATCG GTCCGGTTTCGCAACATCTTCTGCCCGAGTGTGTAGACCAGTAGCGCAGA ATTGTCGAGTTTGAGGTTGAGGAGTATGATTAGTTTATCGTAGTCTCCAC TGCGGAAAACGTATCGGCATGAGCAAGAAAAGGTCTGCAGTTGGTTGACA AGCCGTATGAATGTTCAATCTACATCGAAAATTACGTAGGTGTGACTTTT TTGTTACAAGTTAATTTCCCTATCTATTTCATTAGTTTCGTACTTTACTT CAATCCCTTCATGTTAACCCTTAAGATCTGGTTTTGACGTCCTCA
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Coding sequence (CDS) from alignment at H-elongata_contig20032:63..3107-

>mRNA_H-elongata_contig20032.5641.1 ID=mRNA_H-elongata_contig20032.5641.1|Name=mRNA_H-elongata_contig20032.5641.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1068bp|location=Sequence derived from alignment at H-elongata_contig20032:63..3107- (Himanthalia elongata Himel1 dioecious)
ATGGTGTCAACCTCGGAACAACTGTCCCAGCTGGTATTTTGCGCCGCGGT
GTTTCTGGAGGTGGTCAGAATGAGGACGCCGGGACCTTTTCTCTCCCACA
CTTGCTTGATGGTGTCAACCTCGGAACAACTGTCCCAGCTGGTATTTTGC
GCCGCGGTGTTTCTGGAGGTGGTCAGAATGAGGACGCCGGGACCTTTTCT
CTCCCACACTTGCTTGGAGGACCATACGACGGAAAGCGGTTTGAAGATTG
AGAAAGGAAGGGGTGTTATTGTCCTTAATCGGTTCGCCAGTATCTCTGAA
GACAACTTCACGAGGGGTGCGGAGTTCGTGCCCGAGAGGAGGACCATACG
ACGGAAAGCGGTTTGAAGATTGAGAAAGGAAGGGGTGTTATTGTCCTTAA
TCGGTTCGCCAGTATCTCTGAAGACAACTTCACGAGGGGTGCGGAGTTCG
TGCCCGAGAGGTGGATCGAATCCGAGCGCGCCGAGGCTTTGCTGGGCAAG
GGCACACGGAATGGCGAGGAACGCAGCATCCACCACGCGGATGAAGCCTT
CCTGGCGTTCGGCAGCGGACCGCGGGTGTGCCCCGGAAAGGTGGATCGAA
TCCGAGCGCGCCGAGGCTTTGCTGGGCAAGGGCACACGGAATGGCGAGGA
ACGCAGCATCCACCACGCGGATGAAGCCTTCCTGGCGTTCGGCAGCGGAC
CGCGGGTGTGCCCCGGAAAGGACCTGGCAAAGGCGGAGGCAACAGCAATC
ATCGCCGCGATCTGCTCACGCTTCGACGTCTCGCTCGCTCCTGGTCAGGA
CCTGGCAAAGGCGGAGGCAACAGCAATCATCGCCGCGATCTGCTCACGCT
TCGACGTCTCGCTCGCTCCTGGTCAGCTCGACCCGCCGGAGGAGATAGCG
GAGTTCACTGTCGGGCCAAAGGCGATGTACTTGAAATTCAAACTAAAAGA
GAGTTCTAACGCAGAACTCTAGCTCGACCCGCCGGAGGAGATAGCGGAGT
TCACTGTCGGGCCAAAGGCGATGTACTTGAAATTCAAACTAAAAGAGAGT
TCTAACGCAGAACTCTAG
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