mRNA_H-elongata_contig20032.5641.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: D8LC30_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC30_ECTSI) HSP 1 Score: 201 bits (511), Expect = 4.260e-54 Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = 1
Query: 280 SRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYL 783
S GMVST+EQL +L FCAAVF E +R+RTP P LS TC ED T +SG ++KG V+ LNR ISED FTRG EFVPERWI SER +AL K + + I H +EAFL+ G GPR+CPG+D+AKAE IIAAIC+RFD+SLAPGQ DPPEE + FT GPK +
Sbjct: 386 SDGMVSTAEQLKRLRFCAAVFKEALRLRTPAPRLSFTCTEDFTMKSGRVLKKGTAVLTLNRAVGISEDFFTRGDEFVPERWISSEREKALSEKQSTWIGKGGISHEEEAFLSMGHGPRICPGQDMAKAEGAIIIAAICARFDLSLAPGQADPPEEYSSFTCGPKEFNM 553
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI) HSP 1 Score: 130 bits (327), Expect = 7.360e-29 Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 1
Query: 397 EDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLK 798
E T +SGLK+E G +L R+ +SE +FTR +FVPERWI++ER EALLG+ + + H +E AFG GPR CPG D+A EA I+AAI +RFD++LAPGQ DPPEE+ +FT G +++ L K
Sbjct: 396 ETTTMKSGLKLEAGTAFTLLLRYPCLSEHSFTRAKDFVPERWIDAEREEALLGQPADR-KSSDVVHREEVAQAFGGGPRKCPGMDMAHLEAAIILAAISARFDLALAPGQADPPEEVFKFTAGVESLKLVLTKK 528
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: UPI0012BC3AC0 (cytochrome P450 n=1 Tax=Xanthovirga aplysinae TaxID=2529853 RepID=UPI0012BC3AC0) HSP 1 Score: 92.8 bits (229), Expect = 3.150e-16 Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 1
Query: 271 VVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIH--HADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAE---FTVGPKAMYLKFK 792
+ PS E +++L + AV +E +R++ P L LED T + ++G +++ N+ A S+DNF +F+PERW+++ +H H E AFGSGPR CPGK+LA E ++ IC FD+ L + PE++ E FT+ P+ ++L+FK
Sbjct: 417 IFPSTSHPVDYEMINRLKYTEAVAMEAIRLKPVTPNLYFQALED-TQINNFLFKQGTTIMMQNKVAQTSDDNFAEAGKFIPERWLKT---------------GCPVHGAHKPEMIKAFGSGPRFCPGKNLAMHEMIMSLSMICKNFDLEL----VVKPEKVKEIFAFTMYPENLWLRFK 575
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A7X3XGU1_9SYNE (Cytochrome P450 n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A7X3XGU1_9SYNE) HSP 1 Score: 90.9 bits (224), Expect = 9.890e-16 Identity = 59/191 (30.89%), Postives = 97/191 (50.79%), Query Frame = 1
Query: 271 VVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLKESSNAEL*GSK*ITG 843
+V + T EQ S L F A EV+R++ P ++ LED T G + KG + VL R+ + E++F G F PERW+ G E+ HHA +AF+ FG+GPR+CPG++LA E ++A +C F++ + E++A + P ++L+ K + +++ G+ TG
Sbjct: 315 LVAPAAALDTLEQASHLPFLDAFCNEVMRLKPVAPNMALETLED-TEMLGCLMPKGTKLFVLLRYVATREEHFAGGDRFDPERWLPRPA-----------GREQQPHHA-QAFVPFGAGPRICPGRNLAMLEIRTVLAMLCRNFELEPVSPAKEAKEKMA-VVMRPDHLHLRLKRRSLNSSGPAGAATATG 491
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A7X3YR80_9SYNE (Cytochrome P450 n=4 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A7X3YR80_9SYNE) HSP 1 Score: 90.9 bits (224), Expect = 1.190e-15 Identity = 55/180 (30.56%), Postives = 94/180 (52.22%), Query Frame = 1
Query: 268 DVVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAE---FTVGPKAMYLKFKLK 798
D++ + EQ ++L F A EV+R++ P ++ LED T G ++ KG + VL R+ + E++F G F PERW L + T NG++ H +AF+ FG+GPR+CPG++LA E ++A +C FD+ ++P E+ E + P ++++ K +
Sbjct: 350 DLIGPAAALDELEQANRLPFLDAFCNEVMRLKPAAPHMALEALED-TEMLGCRLPKGTKLFVLLRYTATREEHFAGGDRFDPERW---------LPRPTGNGKQP---HNTQAFVPFGAGPRICPGRNLAMLEIRTVLAMLCRNFDLE----PVNPGREVREKMAVVMRPDQLHVRLKRR 512
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A158BQM1_9BURK (Cytochrome P450-like protein n=1 Tax=Caballeronia hypogeia TaxID=1777140 RepID=A0A158BQM1_9BURK) HSP 1 Score: 87.0 bits (214), Expect = 1.650e-14 Identity = 54/178 (30.34%), Postives = 84/178 (47.19%), Query Frame = 1
Query: 268 DVVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLKE 801
DV+ + T + +L C AV E R+ P+LS LE+ + G+++ G + +LNR A + NF A + P+RW+ R G H A+L FG+GPRVCPG+ LA E +++ + + F LA D E+ FT P AM ++ L++
Sbjct: 323 DVIGDAAVCPTYGAMRELDLCEAVCTEASRLHPIAPYLSFEPLEEVRLQ-GVRLPAGTKMFMLNRPAMMDPKNFADPARYDPDRWLHEHRHPV-------EGAPEHGPHEQRAYLQFGAGPRVCPGRHLAVVEMRLVVSMLAANFTAQLATNPADI-HEVCTFTSVPSAMPVRLALRQ 491
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: R7UEK1_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UEK1_CAPTE) HSP 1 Score: 80.5 bits (197), Expect = 1.890e-14 Identity = 50/148 (33.78%), Postives = 70/148 (47.30%), Query Frame = 1
Query: 307 QLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIA 750
+L +L A+ E +R++ GP L TCL+D T + I KG +I LN +A F F P+RW+ E+ + H+ E + FGSGPR CPG+ LA E A +A IC FD L D EE++
Sbjct: 1 ELDKLPLMDAIIQETLRLKPVGPLLYLTCLQD-TRVGDVLITKGTSLITLNEYAGKRNQWFHHAETFNPQRWLNPEQFQP---------------HSPETMIPFGSGPRFCPGRQLALMEIKATMAMICHYFDWQLVTSVEDIKEELS 132
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A9GM12_SORC5 (Putative cytochrome P450 CYP261A1 n=1 Tax=Sorangium cellulosum (strain So ce56) TaxID=448385 RepID=A9GM12_SORC5) HSP 1 Score: 86.3 bits (212), Expect = 2.790e-14 Identity = 55/162 (33.95%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 304 EQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKF 789
E +L + AV E +R+++ P L D T L++ G +I+L R ++ E++F A F+PERW+ A A GK H A LAFGSGPRVCPG+ L+ E+ + A + FDVSL P +E+ FT+ P+ ++++F
Sbjct: 331 EHAQRLRYLGAVAQETLRLKSAAPILFMEACAD-TVVGSLRLAAGTRMILLTRQIALKEEHFHDAASFMPERWLTPRPAGA--GK-----------HDPRAALAFGSGPRVCPGRALSMVESAMVGAMVARDFDVSLV-DPARPVKELLGFTMKPEGLFVRF 477
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: UPI0015656D9A (cytochrome P450 n=1 Tax=Paraburkholderia sp. NMBU_R16 TaxID=2698676 RepID=UPI0015656D9A) HSP 1 Score: 86.3 bits (212), Expect = 3.960e-14 Identity = 53/177 (29.94%), Postives = 88/177 (49.72%), Query Frame = 1
Query: 271 VVPSRGMVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKFKLKE 801
V+ + +++ Q +L + AV E +R++ PFL L D + G+ + KG +I+L R+ ++ E ++ R F P+RWI E + D F+AFGSGPR CPG++LA E IA +C F +S++P E ++ FT+ P + L F ++
Sbjct: 441 VLGTEKLLTDPGQADKLTYIDAVANETMRLKPVAPFLVVEPLNDVELD-GVSVPKGTIIILLTRYPNLLEQHYVRAQTFDPDRWI---------------AEGENALPRDARFVAFGSGPRYCPGRNLAMLEIKCAIAMLCRNFHLSVSPACASVEERLS-FTMMPHGLRLNFVTRD 600
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Match: A0A4P2PSV2_SORCE (Cytochrome P450 n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2PSV2_SORCE) HSP 1 Score: 85.1 bits (209), Expect = 6.600e-14 Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 1
Query: 304 EQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGRGVIVLNRFASISEDNFTRGAEFVPERWIESERAEALLGKGTRNGEERSIHHADEAFLAFGSGPRVCPGKDLAKAEATAIIAAICSRFDVSLAPGQLDPPEEIAEFTVGPKAMYLKF 789
E +L + AV E +R+++ P L D TT +++ G +IVL R + E++F A FVPERW+ A A GK H A LAFGSGPRVCPG+ L+ E+ + A + FDVSLA P +E+ FT+ P+ + ++F
Sbjct: 331 EHAQRLRYLGAVAHETLRLKSAAPVLFLEACAD-TTLGPVRLAAGARMIVLMRQVGLKEESFHDAASFVPERWLTPRPAGA--GK-----------HDPRAALAFGSGPRVCPGRALSLIESAMVGAMVARDFDVSLA-DPARPVKELFGFTMKPEGLVVRF 477 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20032.5641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20032.5641.1 >prot_H-elongata_contig20032.5641.1 ID=prot_H-elongata_contig20032.5641.1|Name=mRNA_H-elongata_contig20032.5641.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp MVSTSEQLSQLVFCAAVFLEVVRMRTPGPFLSHTCLEDHTTESGLKIEKGback to top mRNA from alignment at H-elongata_contig20032:63..3107- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig20032.5641.1 ID=mRNA_H-elongata_contig20032.5641.1|Name=mRNA_H-elongata_contig20032.5641.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3045bp|location=Sequence derived from alignment at H-elongata_contig20032:63..3107- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig20032:63..3107- >mRNA_H-elongata_contig20032.5641.1 ID=mRNA_H-elongata_contig20032.5641.1|Name=mRNA_H-elongata_contig20032.5641.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1068bp|location=Sequence derived from alignment at H-elongata_contig20032:63..3107- (Himanthalia elongata Himel1 dioecious)back to top |