mRNA_H-elongata_contig200.5631.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig200.5631.1
Unique NamemRNA_H-elongata_contig200.5631.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.330e-69
Identity = 239/802 (29.80%), Postives = 356/802 (44.39%), Query Frame = 1
Query:  436 LGMGEDARTILGLLSRCTHYLENNPWECPPAPVVEKGIDAMKKYYGELVKTKPVLID-----LRKVVFIGHSGSGKTSLIKSIKAGKGHLA--LEEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRFMDKITSQELAHH-LNEWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQS-QGKHSTSVRGLKLECGIQLIS----SSPTCYCDNGLADFLQRLKICGDSTRWLIPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLP---VASSSKICWVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRG--VFLDVEDFALSLAPILNHKTQQNDSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKED--------GVLPEQTFDVLVKLGILLPLPRR------DEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFERLRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHGQLQHYLACVDDSEEMSPGRSIIRPYESPICGCTEGVASSLGKVLRRSPTWDPSHLDDVFKTGDRSSQYARSFNDDGEQRFKAAIDIALDATQEIPTMDEARESEG------WKTPEWVKDALFAGPMGLFT 2727
            LG  EDA  ++  L     YL  NPW  PP  VVE G+ A+K+Y  ++ + K    D     L KVV +G + +GKTSL+ SI AG+G        +  TVG+ +     +     DT ++ +D AGQV+Y G+HQ FLT RALY+L+ D +++       +  H  +  WL  L+LRAP STV+L     D  +     T      +R R + A+              W   +  +G+    V  L L  G+  +S     SP       L   + R      +T   +PP+W LAL V+ A+R   +P+ AAR  +   +PLP   VA      ++   +L   W+SV++ L  D+P  +   + E  L+  + + + AG  L+   G  +FLDV   +  L+PIL+HK +           ++  +++W L  R  L   GIL REFAL +W+E           + E  F VL+KLG+ LP+ RR      D      P D   +       + LV+MRL           F+          V ++WEF     P+GL+ERL+ASCH +G V    CWR GA F  H   F    G      K   S TS   +      + FG      +W A+R+V SA  ++ +E+PG+ W  W++C KH  Q   Y+A   ++    P      P ++  C C        G VLR +       L  V  TG              +  F+   D   +  +E  T +  RE+ G      W+T +W    LF   + LFT
Sbjct:    9 LGETEDALRLVERLGDSL-YLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQ-----DTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDDLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQ-RRVRELVAV--------------WHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQA----ATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMI-SNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLK-----------NQPFENRW-LWMRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGS------NDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRF--VEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQ-HLYMASSVEARVGDPLLPAAAP-DARRCDCL----LEPGGVLRLAV----EELGPVIDTG--------------KDPFEGLSDEDTEDPEETVTCNCVREAFGHWLPHAWRTAKW----LFGLAVVLFT 736          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 3.120e-67
Identity = 222/726 (30.58%), Postives = 329/726 (45.32%), Query Frame = 1
Query:  436 LGMGEDARTILGLLSRCTHYLENNPWECPPAPVVEKGIDAMKKYYGELVKTKPV-----LIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLALEEELETVG----VSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRFMDKITS---QELAHHLNEWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCYCDNGLADFLQRLKICGDSTRWLIPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLPVASSSKI--------CWVPCVQLQISWKSVLNPLELDLPPEVRP---DDPEFTLQSVIDMRERAGSLLK--HPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKE--DGVLPEQTFD----VLVKLGILLPLPRRDEQGVYRPCDWESTAAWD---CIEEYLVLMRLP--LNPTHKTLARFNAFERLRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHK-ASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHGQLQHYLACVDDSEEMSPGRSIIRPYESPI----CGCTEGVASSLGKVLRR 2490
            +G  E A   L   S C   L  NPW  PP  VVEKG+ A++ Y  ++ K +        + L KVV +G S +GKTSL+ SI  G+G       L TVG    VS  GI         T ++ YD AGQV+YYG+HQ FLT RALY+L+WD  R   K      + +   +  WL  LHLRAP STV+L     D  +     T ++               VE  +     +W+   ++G  ST    + ++  +   SS  +C    GL + + R+     +    +PP+W LAL  LDA+RD  DP +A R      D L + S  K+         +     L   WK V+  +E +L  +       DP+  ++  + + E AG +L+  +  GVFLDV   + +L PIL+HK               K+  Q     R  LV  GIL   FA  LW +  +  +PE+  D    V+V LG+ LPL    E     P    + A        ++ LV+MRLP      H+     +   R   D  V + W F     P+GLVER++ASCHA+G V    CWR GA F     A+ D +   +   +++  S+  N      L ++ FG  +   +W ALR+V S+  +I +++PG+ WE W +C + H    ++      S++ S G  ++    +      C C     + L  VL R
Sbjct:  161 VGEAEHALRWLTRRSECLIVLGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRG-------LPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAV---------------VEERVAVLRKEWRK--ARGFSSTR---MDMDMTVLERSSLVSCLDGVGLQEMIDRIA-AQSAASMRVPPAWGLALTFLDALRDSRDPQQACR------DCLSLGSRPKVGADREPGRSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVH------------KVFPQHFAGMRNELVHNGILRIAFAEHLWSDVMEITVPEEVLDALCRVIVNLGVALPL----EPASLLPGSGRALATGRPNISRQDMLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSDRLYTFVVRY-DSAVGN--ERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFAT----SDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLER 829          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 9.150e-64
Identity = 226/740 (30.54%), Postives = 338/740 (45.68%), Query Frame = 1
Query:  436 LGMGEDARTILGLLSRCTH----YLENNPWECPPAPVVEKGIDAMKKYY---------GELVKTKPVLIDLRKVVFIGHSGSGKTSLIKSI--KAGKGHLALEEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRF-------MDKITSQELAHHLNEWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCYCDNGLADFLQRLKICGDSTRWLIPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLPVASSSKICWVPCVQLQISWKSVLNPL--ELDLPPE-VRPDDPEFTLQSVIDMRERAGSLLK--HPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLP--EQTFD----VLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFER----LRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAA-GGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKH-HGQLQHYLACVDDSEEMSPGRSIIRPYESP-ICGC--TEGVASSLGKVLRRSPTWDPSHLDDVF 2529
            LG  E A   +  L +        L++NPW  PP  +V +G+ A++KY          G  VKT  VL    KVV IG  G+GKTSL+ SI  + G   +   EE+ TVG+ +     ++ +R    ++ YD AGQV+YYG+HQ FLT RALY+L+WD SR        +DK+ S+++     +WL  LHLR P S VLL     D  +   + T                  VE S + +  +W+      + S  V  L +     L+S    C    GL++ + R+   G +T  ++PPSW LAL  LDA+RD  DP  A R  ++ +    V ++    ++    L   W   +  +  EL  P E +   D    ++  + + E AG +L+  H   +FLDV   + +L PIL+HK + +       F   +L +      +  LV  G+L  +FA +LW  +   P  E+  D    VL  LG+ LPL R +E+      D  +       ++ LV+MRLP               R      G   V ++W F      HGLVER++ASCH +G+V    CWR GA F  +  + D      ++  +++ +   S       L V  FG      LW ALR+V S+  +    +PG+RWE    C  H  G++  Y     ++    P  +   P  +P +C C  TEG A  L  VL R  T   +  DD F
Sbjct:  318 LGQAEQALQFVARLGQLASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVL----KVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELR----RHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIM----KWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGA---------------VESSARRQLQEWQG----NRKSPGVTKLTILQQPSLVS----CDDGGGLSEVIARVDAQG-ATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESH------FFPRSELTAM-----KDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGR-EERHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADDGGLNWLYSFVIRYDEEVGSG---ERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRM--YFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRL--VLERLGTIIDTQKDDPF 1002          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 3.740e-44
Identity = 196/728 (26.92%), Postives = 302/728 (41.48%), Query Frame = 1
Query:  463 ILGLLSRCTHYLENNPWECPPAPVVEKGIDAMKKYYGELVKT--KPVLIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLALEEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRFMDK----ITSQELAHHLN--------EWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCYCDNGLADFLQRLKICGDST---RW-----------------------------LIPPSWRLALVVLDAVRDGIDPVKAARCHINPND---------PLPVASSSKICWVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADR--KLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFERLRGDWGVV--VRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHGQLQHYLACVDDSEEMSPGRSIIRPYESPICGCTEGVASS 2469
            +L  LSR    +  NPW+ PP  VV KGI A+++Y+ +L      PV   + KVV +G  G+GKTSL +S++ G+       E  TV + V  ++          +++YD AGQV Y GL Q+FL+ RA+ +L+ D   F  +    I S +L   L+        +WL +L  R P S V++  T  D       L   +      R   AI E +E         W            +  + +E G+ L S  P    ++G A   +R     DST    W                             ++P SW +AL VLDA+  G +PV++A+ ++  +          P     +  +  +    L   W  V+  LE D    V+PD     L+  + +RE  GSL++H   VFLDV   A  L P+LNH+  ++  RG     D    L     + +  RL   G+LE   A  LW  DG L       L  LG+  PL     +G+                  +VL+RL            + F R   D   V  V+W+  +G  P G +E+++  C  +G +   T WR G   V        A  +FAL ++++            + ++ +G+    A W AL F IS    +  EFPGLRW A ++CP+H              ++M   ++  RP +  + G T  +  S
Sbjct:  234 LLATLSRLGFLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNG-----VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCD-------LAAGMGTDAAGRIEGAIGEWLE--------SWSG--------AGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGDGVSVVKPD---HALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWP-DG-LSNYVLPALDSLGLTYPLDDDPAEGL------------------VVLLRLDEKRPEDVGKELDDFRR---DHTAVLSVKWKVFLG-VPPGAIEKMLTRCCRLGTL--RTFWRFGV-LVQGSLGGGIAARTFALVVEYSHDKCE-------VDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHE-------------QDMQISKAATRPGDKSLFGATCSLCDS 883          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 7.170e-43
Identity = 184/674 (27.30%), Postives = 289/674 (42.88%), Query Frame = 1
Query:  463 ILGLLSRCTHYLENNPWECPPAPVVEKGIDAMKKYYGELVKT--KPVLIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLALEEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRFMDK----ITSQELAHHLN--------EWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLA--------WLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCYCDNGLADFLQRL------KICGDSTRWLIPPSWRLALVVLDAVRDGIDPVKAARCHINPND---------PLPVASSSKICWVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADR--KLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFERLRGDWGVV--VRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHGQLQ 2361
            +L  LS+   ++  NPW+ PP  VV KGI A+++Y+ +L      PV   + KV+ +G  G+GKTSL +S++ G+       E  TV + V  ++          +++YD AGQV Y GL Q+FL+ RA+ +L+ D   F  +      S +L   LN        +WL +L  R P S V++  T  D  + + +   + A        W++     +     VE  +   +         G  +   R    E        S    C       L R+      ++ G S   ++P SW + L VLDA+  G DPV++A+  +  +          P     +  +  +    L   W  V+  LE D    V PD     L+  + +RE  GSL++H   VFLDV   A  L P+LNH+  ++  RG     D    L     + +  RL   G+LE E A  LW  DG L       L  LG+  PL     +G+                  +VL+RL            + F R   D   V  V+W+  +G  P G +E+++  C  +G +   T WR G   V        A  +FAL ++++         T  + ++ +G+ +  A W AL + IS    +  EFPGLRW A ++CP+H   +Q
Sbjct:  198 LLATLSQLGLHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVEQMDVNG-----VTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCD--LAAGMAADAAARMAGGAGNWIESWSDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDG-MCVESQPSLLHRVMYNNKGELRGASL--VLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVAALEEDGVSIVNPD---HALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWP-DG-LSNYVLPTLDSLGLTYPLDDDPAEGL------------------VVLLRLDEKRPEDVGKELDDFRR---DHTAVLSVKWKIFLG-VPPGAIEKMLTRCCRLGTL--RTFWRFGV-LVQGSLGGGMAAKTFALLIEYSHD-------TCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQDMQ 824          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 2.120e-38
Identity = 182/677 (26.88%), Postives = 285/677 (42.10%), Query Frame = 1
Query:  496 LENNPWECPPAPVVEKGIDAMKKYYGELVK------TKPVLIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLALEEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRF--MDKITSQELAHHLNEWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCY--------------CDNGLADFLQRLKICG-DSTRWL---IPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLPVASSSKICWVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLN-PTHKTLARFNAFERLRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHGQLQHYLACVDDSEEMSPGRSII-RPYESPIC 2442
            L  NPWE PP  +V  G+ A++ YY  + K      T+P+     KVV IG    GKTSL +SI  G   +     +E+   +VH ++ ++ +     ++++D AGQV YYGL QLFLT RA+Y+L+WDA++   MD +  ++LA  +  WL  L  R P++ V+L G   D+ V               R+   + +DVE   +    +W     +  H     GL LE G+ L+S + +C               CD        R+     D  R +   +PPS+RLAL +L+ +          R                   +    L+  W + +  L     P   P   E  +   I +R+  G L+++   VFLDVE FA  L P+ +H+    DS G       ++ +   L +  RL    + E + A  LW  +  L       L   G+  PLP     G+                  ++L+R+    P   ++ R  A +  + D  + V   F +G  P G VERL+A C  +G       WR GA  V + A      G F+L+L +++           L V+  G  +    W AL  V+S    +  EFPGL  E    CP+H  +          + +  PG  ++ + Y  P+C
Sbjct:  410 LSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPL-----KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVES---TVH-VDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA--IAPWLRYLTFRVPNANVILVGNKWDRVV---------------RTRGTVADDVECESR----RWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTR----------------GITRADLEEKWHAKVAELNGAGTPVAAP---EAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHR---RDSYGDIDLGGIRVTN---LASLRRLDNEHVFEPQLAEELWTPE--LAPHLLLALKSAGLTFPLPNDPNGGL------------------VILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPP-GFVERLLARCCHLGYPY--PFWRYGALIVGNGAE----KGLFSLSLDYSEHDN-------MLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIR-----TTDAPPGSGLVEKGYFCPLC 992          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.040e-36
Identity = 187/661 (28.29%), Postives = 287/661 (43.42%), Query Frame = 1
Query:  496 LENNPWECPPAPVVEKGIDAMKKYYGELVKTKPVLI--DLRKVVFIGHSGSGKTSLIKSIKAGKGHLALE-EELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRFMDKITSQ------ELAHHLNE-----WLVTLHLRAPHSTVLLCGTHKDKC------VPSNILTKSLAWLKRSRSIEAILEDVEY-------SIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCYCDNGLADFLQRLKICGDS-----TRWLIPPSWRLALVVLDAVRDGIDPVKAA-RCHINPN--DPLPVASSSKICW--VPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQND----SRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFERLRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDA---AGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKH 2346
            L  NPW  PP P+V KG  A++ Y+ +L   +P  I   + KVV +G  G+GKTSL +S+KA +     E +E  TV   V  +  +      + +++YD AGQV Y GL Q+FLT RA+ VL+ +A +F  +  S+      E    L E     WL ++  R P++ V+L  T  D        + + +      WL  S  +   L+ V         S  +  +    E S G H   ++G        +   +P+          L RL    D      T+ ++P SW +AL VL+A+  G DPV+   R   +P+  D    A      +  +    L I W+  ++ LE      V   + +  L+  + +RE  GSL+++ + +FLDV   A  L P+LNHK Q+      S G    A   LD    + +  RL   G+LE   A  +W     L E     L  LG+  PL     +G+                  +VL+RL  +         + F  L     +   W+  +G  P G +E+++  C  +G V   T WR G   + H    +      G FA+ L++  SST N      L  Q FG+    A W  L +V+SA   +  +FPGLRW   + CP+H
Sbjct:  155 LGTNPWVEPPEPIVVKGPKAVRGYFEDLY-AEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEG-----SSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWL--SSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHE--LKGGWACDWRDMADGNPS-------PSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERS---GVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNG--LSEYVLPALAFLGLTFPLEDDPAKGL------------------VVLLRLKPDRPESVGHAIDTF-CLDHTPALSASWKIFLG-VPPGAIEKVLTRCCGLGGV--RTFWRYGV--LVHGGLGEVHVGRRGIFAVVLEY--SSTDN-----ELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQH 762          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.660e-36
Identity = 188/706 (26.63%), Postives = 289/706 (40.93%), Query Frame = 1
Query:  496 LENNPWECPPAPVVEKGIDAMKKYYGELVK------TKPVLIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLALEEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRF--MDKITSQELAHHLNEWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLIS--------SSPTCY------CDNGLADFLQRLKICG-DSTRWL---IPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLPVASSSKICWVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFERLRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHGQLQHYLACVDDSEEMSPGRSIIRP-YESPICGCTEGVASSLGKVLRRSPTWDPSHLDDVFK 2532
            L  NPWE PP  +V  G+ A++ YY  + K      T+P+     KVV IG    GKTSL +SI  G   +     +E+   +VH ++ ++ +     ++++D AGQV YYGL QLFLT RA+Y+L+WDA++   MD +  ++LA  +  WL  L  R P + V+L G   D+ V               R+   + +DVE   +    +W     +  H     GL LE G+ L+S        S+P         CD        R+     D  R +   +PPS+RLAL +L+ +          R                   +    L+  W + +  L     P   P   E  +   I +R+  G L+++   VFLDVE FA  L P+ +H+    DS G       ++ +   L +  RL    + E + A  LW  +  L       L   G+  PLP     G+      ++T       EY     + L   HK             D  + V   F +G  P G VERL+A C  +G       WR GA  V + A      G F+L++++++           L ++ FG  +    W AL  V+S    +  EFPGL  E    CP+H  +          + +  PG  ++   Y   +C   E     L   L+     D   LD+  +
Sbjct:  503 LSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPL-----KVVIIGKETVGKTSLRRSITTGGPCMTQNGGVES---TVH-VDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA--IAPWLRYLTFRVPDANVILVGNKWDRVV---------------RTRGTVADDVECESR----RWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTR----------------GITRADLEEKWHAKVAELNGAGTPVAAP---EAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHR---RDSYGDIDLGGIRVTN---LASLRRLDNEHVFEPQLAEELWTPE--LAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRP----PEY----GIKLEQVHKAS---------EADLRLTVACSFSLGLPP-GFVERLLARCCHMGYPF--PFWRYGALIVGNGAE----KGLFSLSVEYSEEDK-------ILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIR-----TTDGRPGSCLVEESYFCQLCQDREAGIDLLAAALQVVEFSDEKFLDEPLR 1115          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 2.230e-33
Identity = 171/684 (25.00%), Postives = 272/684 (39.77%), Query Frame = 1
Query:  496 LENNPWECPPAPVVEKGIDAMKKYYGELVKTKPVLIDLR--KVVFIGHSGSGKTSLIKSIKAGKGHLALE-EELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRFMDKITSQELAHHLNE------------WLVTLHLRAPHSTVLLCGTHKDKC------VPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCYCDNGLADFLQRLKICGDSTRW------------------------------LIPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLPVASSSKIC------WVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQNDSRGVAVFADR-----KLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAF-----ERLRGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKH 2346
            L++NPW  PP  +V KG   ++ Y+ +L   +P  +     K++ +G  G+GKTSL KS+KA +     E +E  TV   V  +  +      + +++YD AGQV Y GL Q+FLT RA+ V++ +A  F  +  + E    + E            WL ++  R P + V+L  T  D        +   I   S  WL                       W          + ++ ++LE G+ L S   T  C++G      +    G +  W                              +IP SW +AL VL+A+  G DPV+     +   D    A+ +  C       +    L+  W+     L      ++   + +  L+  + +RE  GSL++H   VFLDV   A  L P+LNHK ++    G+    D       L+    + +  RL   G+LE   A  LW     L E     +  LG+  PL      G+                  +VL+RL  +         + F       LR  W + +         P G +E+++  C ++G V   T WR G   V          G FA+ L+++       P+   L  Q FG+    A W AL +V+SA   +  +FPGLR    ++CP+H
Sbjct:  298 LDDNPWAEPPESIVAKGAKNIRGYFEDLY-AEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEG-----SSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWL---------------------ASWVR--------SGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGD-ATGTAACKTGLYHGITAEDLRTKWQEAAVGLAGR---DITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFD-GLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNG--LSEYVIPTIASLGLTFPLENDPAGGL------------------VVLLRLEHDRPELVGKVIDTFCLDQTPALRASWKIFL-------GVPAGAIEKVLTRCCSLGGV--QTFWRSGV-LVHGGVGEQDRSGIFAVVLEYS-------PSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904          
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.450e-33
Identity = 179/647 (27.67%), Postives = 269/647 (41.58%), Query Frame = 1
Query:  505 NPWECPPAPVVEKGIDAMKKYY------GELVKTKPVLIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLAL---EEELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYVLMWDASRF--MDKITSQELAHHLNEWLVTLHLRAPHSTVLLCGTHKDKCVPSNILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGLKLECGIQLISSSPTCY--------------CDNGLADFLQRLKICG-DSTRWL---IPPSWRLALVVLDAVRDGIDPVKAARCHINPNDPLPVASSSKICWVPCVQLQISWKSVLNPLELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAPILNHKTQQN---DSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWKEDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLVLMRLPLNPTHKTLARFNAFERL-RGDWGVVVRWEFKVGSTPHGLVERLVASCHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTTGTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKH 2346
            NPWE PP  +V  GI A++ Y+      G    T+P+     KVV +G    GKTSL +SIK GK  +     EE    V V  H ++          ++++D AGQV YYGL QLFLT RA+Y+L+WDA++   M+ +  ++LA  +  WL  L  R P ++V+L G   D+ V             R+R   A+  DVE+  +    QW     +       RG+ LE G+ L+S + +                CD        R+     D TR +   +P S+RLAL +L+ +         A C  +  +      +  I       L+  W++ +  +         PD     +   I +R+  G L+++   VFLDVE FA  L P+  HK       D  G+ V     LD         RL    +LE + A  LW    VL       L   G+  PL      G+                  ++L+R+   P      +    ++  + D  +VV   F++G  P G VERL+A C  +G  +    WR GA  V       A    F+L+L+++++          L V+  G       W AL  V+S    +  EFPGL       CP H
Sbjct:  341 NPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPL-----KVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGH-------PIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA--IAPWLRHLTFRVPDASVILVGNKCDRVV-------------RTRRT-AVAVDVEHESR----QWLESWIEIARGHQPRGISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEEL---------ASCSRSKTEQQTRGITRAI-------LEEKWQAKVAEMNRAGTSVAAPD---AAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLD---------RLDEEHVLEPQLAEDLW--GPVLAPHLLLALKSAGLTFPLSNDSNGGL------------------VILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPP-GFVERLLARCCHLG--LPYPFWRYGALIV----GKGAEERMFSLSLEYSEARK-------ILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLH 893          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig200.5631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE1.330e-6929.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW02_9PHAE3.120e-6730.58Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI9.150e-6430.54LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL98_ECTSI3.740e-4426.92LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL89_ECTSI7.170e-4327.30LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI2.120e-3826.88LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSZ8_9PHAE2.040e-3628.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX69_ECTSI5.660e-3626.63LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI2.230e-3325.00LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI2.450e-3327.67LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig200contigH-elongata_contig200:10906..23378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.5
Seed ortholog evalue1.3e-66
Seed eggNOG ortholog2880.D7FVX5
Preferred nameSLITRK2
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.positive regulation of synapse assembly
EggNOG OGs2CMPC@1,2QR6C@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons14
Model size4500
Cds size2520
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig200.5631.1prot_H-elongata_contig200.5631.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig200 12497..19529 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930126.929949-UTR-H-elongata_contig200:10905..113791622930126.929949-UTR-H-elongata_contig200:10905..11379Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 10906..11379 -
1691679291.301684-UTR-H-elongata_contig200:10905..113791691679291.301684-UTR-H-elongata_contig200:10905..11379Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 10906..11379 -
1622930126.9424055-UTR-H-elongata_contig200:11392..124961622930126.9424055-UTR-H-elongata_contig200:11392..12496Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 11393..12496 -
1691679291.313314-UTR-H-elongata_contig200:11392..124961691679291.313314-UTR-H-elongata_contig200:11392..12496Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 11393..12496 -
1622930127.0784445-UTR-H-elongata_contig200:19529..195701622930127.0784445-UTR-H-elongata_contig200:19529..19570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 19530..19570 -
1691679291.409558-UTR-H-elongata_contig200:19529..195701691679291.409558-UTR-H-elongata_contig200:19529..19570Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 19530..19570 -
1622930127.0897598-UTR-H-elongata_contig200:20486..205581622930127.0897598-UTR-H-elongata_contig200:20486..20558Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 20487..20558 -
1691679291.4182882-UTR-H-elongata_contig200:20486..205581691679291.4182882-UTR-H-elongata_contig200:20486..20558Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 20487..20558 -
1622930127.1017838-UTR-H-elongata_contig200:21028..211001622930127.1017838-UTR-H-elongata_contig200:21028..21100Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 21029..21100 -
1691679291.4260812-UTR-H-elongata_contig200:21028..211001691679291.4260812-UTR-H-elongata_contig200:21028..21100Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 21029..21100 -
1622930127.1130178-UTR-H-elongata_contig200:21351..214231622930127.1130178-UTR-H-elongata_contig200:21351..21423Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 21352..21423 -
1691679291.4338238-UTR-H-elongata_contig200:21351..214231691679291.4338238-UTR-H-elongata_contig200:21351..21423Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 21352..21423 -
1622930127.1238399-UTR-H-elongata_contig200:22275..223471622930127.1238399-UTR-H-elongata_contig200:22275..22347Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 22276..22347 -
1691679291.4432201-UTR-H-elongata_contig200:22275..223471691679291.4432201-UTR-H-elongata_contig200:22275..22347Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 22276..22347 -
1622930127.1366894-UTR-H-elongata_contig200:23305..233781622930127.1366894-UTR-H-elongata_contig200:23305..23378Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 23306..23378 -
1691679291.4528632-UTR-H-elongata_contig200:23305..233781691679291.4528632-UTR-H-elongata_contig200:23305..23378Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig200 23306..23378 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930126.9580069-CDS-H-elongata_contig200:12496..127931622930126.9580069-CDS-H-elongata_contig200:12496..12793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 12497..12793 -
1691679291.3273475-CDS-H-elongata_contig200:12496..127931691679291.3273475-CDS-H-elongata_contig200:12496..12793Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 12497..12793 -
1622930126.970421-CDS-H-elongata_contig200:13547..136691622930126.970421-CDS-H-elongata_contig200:13547..13669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 13548..13669 -
1691679291.3392208-CDS-H-elongata_contig200:13547..136691691679291.3392208-CDS-H-elongata_contig200:13547..13669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 13548..13669 -
1622930126.983851-CDS-H-elongata_contig200:14105..142171622930126.983851-CDS-H-elongata_contig200:14105..14217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 14106..14217 -
1691679291.3480542-CDS-H-elongata_contig200:14105..142171691679291.3480542-CDS-H-elongata_contig200:14105..14217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 14106..14217 -
1622930127.0013642-CDS-H-elongata_contig200:14438..153061622930127.0013642-CDS-H-elongata_contig200:14438..15306Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 14439..15306 -
1691679291.3567417-CDS-H-elongata_contig200:14438..153061691679291.3567417-CDS-H-elongata_contig200:14438..15306Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 14439..15306 -
1622930127.017658-CDS-H-elongata_contig200:15784..164161622930127.017658-CDS-H-elongata_contig200:15784..16416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 15785..16416 -
1691679291.3650224-CDS-H-elongata_contig200:15784..164161691679291.3650224-CDS-H-elongata_contig200:15784..16416Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 15785..16416 -
1622930127.0357218-CDS-H-elongata_contig200:16997..172351622930127.0357218-CDS-H-elongata_contig200:16997..17235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 16998..17235 -
1691679291.3760867-CDS-H-elongata_contig200:16997..172351691679291.3760867-CDS-H-elongata_contig200:16997..17235Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 16998..17235 -
1622930127.0485363-CDS-H-elongata_contig200:18231..184511622930127.0485363-CDS-H-elongata_contig200:18231..18451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 18232..18451 -
1691679291.3886309-CDS-H-elongata_contig200:18231..184511691679291.3886309-CDS-H-elongata_contig200:18231..18451Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 18232..18451 -
1622930127.0646-CDS-H-elongata_contig200:19498..195291622930127.0646-CDS-H-elongata_contig200:19498..19529Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 19499..19529 -
1691679291.398975-CDS-H-elongata_contig200:19498..195291691679291.398975-CDS-H-elongata_contig200:19498..19529Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig200 19499..19529 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig200.5631.1

>prot_H-elongata_contig200.5631.1 ID=prot_H-elongata_contig200.5631.1|Name=mRNA_H-elongata_contig200.5631.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=840bp
MLYLFSNQLSGLGMGEDARTILGLLSRCTHYLENNPWECPPAPVVEKGID
AMKKYYGELVKTKPVLIDLRKVVFIGHSGSGKTSLIKSIKAGKGHLALEE
ELETVGVSVHGINFKNERRGDTDMKLYDLAGQVEYYGLHQLFLTERALYV
LMWDASRFMDKITSQELAHHLNEWLVTLHLRAPHSTVLLCGTHKDKCVPS
NILTKSLAWLKRSRSIEAILEDVEYSIKDKNMQWKNEQSQGKHSTSVRGL
KLECGIQLISSSPTCYCDNGLADFLQRLKICGDSTRWLIPPSWRLALVVL
DAVRDGIDPVKAARCHINPNDPLPVASSSKICWVPCVQLQISWKSVLNPL
ELDLPPEVRPDDPEFTLQSVIDMRERAGSLLKHPRGVFLDVEDFALSLAP
ILNHKTQQNDSRGVAVFADRKLDSQWKLNARTRLVRMGILEREFALFLWK
EDGVLPEQTFDVLVKLGILLPLPRRDEQGVYRPCDWESTAAWDCIEEYLV
LMRLPLNPTHKTLARFNAFERLRGDWGVVVRWEFKVGSTPHGLVERLVAS
CHAIGNVVRDTCWRRGACFVCHKASFDAAGGSFALALKFTQSSTSNIPTT
GTLVVQAFGNRKGRALWGALRFVISAAWDIFQEFPGLRWEAWVECPKHHG
QLQHYLACVDDSEEMSPGRSIIRPYESPICGCTEGVASSLGKVLRRSPTW
DPSHLDDVFKTGDRSSQYARSFNDDGEQRFKAAIDIALDATQEIPTMDEA
RESEGWKTPEWVKDALFAGPMGLFTLYETWVPLLNVADYWRDGPLVQAIS
CTAFAMVLAVAVAVAAVCFFKKLRRTYGWWPPRTNIKSD*
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mRNA from alignment at H-elongata_contig200:10906..23378-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig200.5631.1 ID=mRNA_H-elongata_contig200.5631.1|Name=mRNA_H-elongata_contig200.5631.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=12473bp|location=Sequence derived from alignment at H-elongata_contig200:10906..23378- (Himanthalia elongata Himel1 dioecious)
GGGCTGATACCGAATGGGCTGGGGAAACTTACCGCCCTTACAACTCTTTA CCTTTTCAACAACCAACTAAGCGGTAAGGCCATCATGCGTCCTATTTTTA TTGGAAAAAGCCCATTTCCAAATTCACGGTAACAATTTTTACCTCATACA AATAGAAGGTCGGTTGCAGTATAAGGTTTCCAAACGTTAATTTGTTCTTT TACCGAATATTATTCGTCGAATATCGGCTTAAAAATTGTGTTTTAAAAGA ATTTTCATATGATGTGTTCCTAATACTGGAGTTGAACCATCAACGGGATT GTCCTTCATTCCGCCTAAATATGTCTTATAAGGAGATAATGTACTTTTCC GTGTCCCCACCGGAAATTCTTAACGCTTTTGGTTTCCGCTAGTGTTAATG GCGCTTTTTTGTCGTTCGACTCTCTTTCTTTTATTAGGGTATCCCTAAGT ACTTTTCTTTTCTTTTCTTTTTTCATATTTGTTGTATGGTACATGAATTG TCCGACAAGAAATAAAGCACTAAAATGAGCAAGCTGACCTGTAAGGTTCG AAGTGTAACTTATTTATCCGAAAAATGGATATTGCGATGAACGGTGTCGA TTGGAGTCCGAGATCAATCTTCCCTAAGTCTTTTTTTCCTGGGGATGTAT ATCTGAAAACATATGAATTCAATTAAATTCGTCGACCATTCAAACGTTTT TTCCACCATGAGAGTTGAAGTCCAGGGTCTTGTACTCTAACTCTATATAT CTCGCGTGTCATATTAGCCAGTCGCATCTATCGCCAACGTGGCGGTGAAT AATGACCCTCTTACGGTACTCTTTCTATCTCAAAGTAAACACTGCCTAAC TCGTGAGATACCTGCTGTCCGTTTCTCGGATTCAGCCAGAGTGAGTGTTT ATCGTTAAACTCTTAAGTGAGTGTTGCGCTAGGAATACTCCTCGCACCTT GATGTAGTCAGCGTATATGTAGTTTCAATATCGTCGTGTTGTGCGCTCCG TTTTTTTTGTCCGACGTAATTCTCCGCGCAGGGCCGATACCGAATGAGCT TGCGGAGCTCACCACCCTTACAACTCTTAACCTTTCCAGCAACCAATTAA GCGGTAAGGACGAAATGCGTCCTATTTTACCGGGAGGAGCACATTTTGAA ATTAAATATCTCGTTACACTAGTATTTTGCTGTATGAAGATTTCCGAACG TCCATTTTCGCTTGTACTCAATATTGGCCTAAACTTATTGTTTCAACAGA ATCTACAGATTTTTCTCTTACGCTGGAGAGGGATAAGTCACGGGATTGTC GTCCATTCCGCTGAAAAATGTCTTCTAGATATATAGTGCAGTTGTTTTAC GTTTATTTAATCCACACGTATTTGGTTTTCGTTTAGTGTTGATGGCGCTT GTTTAGCGTTTGAGTCTCTCGCTGACTGTTGATGGCGCTTGTTTCATGTT CAAGTCCCTGATTTAAAAAAAAACATGTATCTGTATTTTTTTAATGGTTC TGGTCTAACCGAAACCGAATATTACGATTAACAGTGTGGCGTTAACTTCC GGCATCAATCTTCCTTAAGATAATTATATGATGGCGAATTCTGTTGAAAA ACATATGAACACTTCGAGCATATACAGCTTTTCATCATAAGAGGTGAAAT TTAGGGTCTTGAATTACATTTTAATACATTTGCGCTAAATGCTAGCTGAT CGCATCTATCGGCAGCGTCGTGGTTAATATCGGCCCTCTTACGATACTTT TTATATCTCAAAGCAAATATTGCCTTGCTCGTGATATACCTGTACTATTC TCAGATTCAGGCGAGGAGAGGGTTCATCGTTGAAATATTGAACGAGTGTT GCGTTGGGCATATTTATTGCACAATGATGTGGCCTTCTTATATGTAGTGT CAATATTGTCGAGTGGTGCGCTCCATGTTCTTGTTCCGTGCCACTCTTTG CACAGGGCTGATACCGAATGAGCTTGGGAAACTCACCGCCCTTACAATTC TTAACCTTTCCAGCAACCAACTAAGCGGTAAGGCCAATGTTCCTGTTCAA CAGCATATGAACCCAATTAAATCCTTCGAACACCCACACCTTCTTTACAC CATTAGATGTGAAGTGCAGGGTCTTGAATTCCAACTTTTTAAATTTGTGC CGAACATTAATCAATTGCGTCCATCGGCAGTGTGGAAGTAAATATTATTC ACACATTGATGTGGTCTACTTATTATATGTAGTTTTAATATCGTCGCGTG GTGCGCTCCGATGTCCTTCTCTGCACAGGGCCGATCCCGAAAGGGCTGGG GAAACTCACCGCCCTTACAAATCTTGATTTCTTTAGCAACCAACTGAGCG GTAAGGCCAGCATGCAAAAAACGGTAAACATTAACAACTCGTTGAAATAT TCTGTATTTCGCTGTATGAAGATTTCCGAACGTCCATTTTAGCTTCTACC AAATATTGTTCATCGAATATTGGCGAATAGTGTTTGTAAAGAATTTACAT ATGTGTTTCTAATATTGGAGTTTAATCAGTGACGGGATTCTCGTCCATTA AGTAGGAATTTGCCTTCGGGGTGAAAAATGTACTTCCCGTGTCCCTACAA GCAATTCTTTAGGTTCCGTTCAGTGTAAATAGTGTTTTTTTCCCTTCTAG ACTTTTTCCTTTATTCAATTTGTTTTTACATATTATGGAATGCTGTGGGA ATCTTTCGATAAGAAAAAAAATATATAGATCAACTTTTTGTGTCGGGTGT ATTTCTCGCACATTGATGTCACTCTGCACATATGTAGTGTTAATATTTTT CCCGACATCCCTCTGCACAGGGCCGATACCGAATGCTCTGGGGAATCTCA CCGGCCTGAGAGGTCTTGATCTTTCAATCAACCAACTGAGCGGTAAGACC AAAAGGCGTCCTATCTTACTGGAGGGAGCGTATTTTTTAAGGAACACAAT TAGTACCTAGTTAAGATCGTACGTATTTTTGCTGCAACAAAAAATATGAA CGTCACTATTTGCTTTAACCGAATATTTTTGTCGATTATCGGTCCAAACT TTATGTTATAAAGAATTTACCAACGTGTTTCTAATTCTGGAGTTGAATTA ATTACGGAATTGTCGTCCATTTTGCCAAAAAATGTCTTCTAGATGTAAAA TGTATTTTTCCGGTATTCCTATAGGCAATTCTAGAAGCTCTTTGTGTATG TTCAGTGTAAATGTCGTTCTTTTGGCCTTCTAGTGTTTGATAAGAAATAT AATTTTGTATGGTGTATGAATCGTTTGATAAGAAATCAAAGCACTTATAA ATTCTACTTTTTGGCTTGTAGCGAGTGAAGTAAAGAAACGTACTACCCTA ATATGAGCAAACTCACCGGTAAGGTCGAAACATATATTGTCCATACGAAA AAAACGTATATTCAACTCTATTATTCAGTTTTCATGGCGTTGTTTATATC CTGGAGATTTATTTTTAAAACCATATGAATCTGTTATATCATAAGAGGTG AAATACAGGGTCCAGAATTTCAAATTCATGTATGTTTGCCTAATATTAGC CGATCGCGTCCATCAGCATCGTGGGGGTGAATATAGGCACTCTTGCGATA CTTTTTATATCTCAAAGCAAACACTGCTGCTCTGGTCGTGAAATATCTGT GCGTTTCTCGGATTCAGGCTAAGAGGGTTGATTATTAAAATCTAGACCGG TGCCGCGTTGTGCTTATTTCGCACACCTTGATGTGGCCTACTTATATGTA GTACCAATATCGTCGCGTGATCGCCCCGTATTTTTCTCGGACGTCACTCT CTGCACAGGGCCGATACCGAATGAGCTTGGGAAACTTACCGCCCTTACTA TGCTTTACCTTTTCAGCAACCAACTGAGCGGTAAGGCCAACGTGCGCCCT TTTGTATCAGAAGAAGCGCATTTTTAAATGGACGGTAGATTTCCGAATGT CTATTTTTCTTCTACCGAATACTGTTTATCGAATATCGGCCCAGACTTCG TGTTATAAAGAAGCTACATGTGATGTTTTTTAACACAGAAGTTAATTCCG GCATCGGATTGTCGTCCATTCCGCGGAATAACGCCATCTGCCTGTGAAAT GTATGTTTCCAGTCTCTACAGGCAATTCTGAACGTTTTGAGGTGTCCACT TCACGCCCACGGTCTTTATTTGGCGATAAGTCTCTTACTTATTAGACTAC GCCATAGTACGTTTAAATATTACATTACTTTACAACCTAGGGATTATGGA GACCCTCATGACTAAGTCGAAGACGGTTTTTTCGTTGTCGAAGTCTAGAG CGGATGACGCGTTGGTCTAGTCGGAGGAACGAGAGGATTCCGGGAGTAAG CGCCGGATATACCGCGGGTAGAGATAATGAGGCGGCTGATGCAGGACGGG ACTTTGCTCTATGTGGAGTAGACCAATCCAAATATTAGGGGGCAAGGGGA TGTAACATAATTGTCCCTGCTTTTTGGCCGGAAGGATTCAAGTTCGTCCC CTTCCGGGGATTTAATCGTCGGATCCCCGGCCGTGGCGCTTCAGATGTGA TGCCTGAATCCGTGTTTTTCTAAGAGATCAATTTTGCGTGTACCCTTCAC GAACCTGGGCGGTTTTAATATAATTGCCCCTCACCTCCATAGTTGGATTG CTCAGTATCAGTACCTTTAAACTGGGCGGTAATGCCATCATTGGTCCTAG TGCAACTGAGGGGAGTCCATTAAAATCTGGTTTCCAGAATAAATATGTTT TACCATTAATGTTGAATGGACGATTTTTTGGAATATCCATCTGCAATGCA GATATCAGAGACTGTGATGGAAAAGCGAATGTTGACATGAGATAGTTTGT GGTTTAGATACAGTATGAACTTCACATCGTTTTTACTCTCTAGTCCTTAT CGTTATATCGCAAATTTGCTGTGCCAGGGTTGGGAATGGGGGAAGACGCA CGCACGATCCTAGGTCTGTTGTCGCGCTGCACACACTATTTGGAAAACAA TCCATGGGAATGCCCTCCAGCACCTGTGGTCGAAAAGGGCATCGATGCCA TGAAGAAGTACTACGGCGAGCTCGTAAAGACAAAACCTGTCTTGATCGAC TTGCGCAAGGTTGTGTTCATCGGACACAGCGGATCTGGCAAAACCAGGTG TGACTGATCATAGTTGAACACACCAGATTAACCCCTAGGTTTAAAGAATA AGCATGCTAAAACGGGATCGTCTCGGGAGACTTAATTCTCCGACGCGAAC AGGGACAGGGAAATTTATATTTTCCTTTCCAGCTGGCTACAAACAGGATG CAACCATTTTTCACAAACAGGGGGCAAAAAAATTCCACAAACAGGAGGCA AGATATTTCGTTGATCTTTACTCAGCTATATGTGGTTTAATTTCGAGAGC GACCCGGAGTTTACCTTTTTAAAGGGGATGTTCAGTTGGGGATCCTGACT TCTACCACCACACACGCCCCTAGTCATGATATTGATATTCTCCTTTTTTT AATGCCTGTATAGAAAGCGATTTACCTCGGCGATGCCTGCACAAGCTTTA CTCTAGTTTGTAGTCGTATAAAGTAATCTCGAATGCCAGCGTATGGCTAA AGCGAGCGATCAAGGTCGTCATTCGGAGTTCCTTCGGCCTTTACGGTGGC AATGTGATGCACGAGATCTTGTTTTATTTATGGCCTCTCACCATCATTAG AGTTGCGCATTGAACTGCCACTATTTCCATGCCACCGGTAACGGGGAGCT TTCTGTTTATTTTCAGTTTCACCCACTAAAACTTCATCATTCATATTATT ACGGGATGGCGCGCGGCACGATTCCAGTGCTGGCGTTTGTCCGTGGAGCA GGAGAGCGCCCGAAAAGGTTCAAGGTTATGGGTGACCATAGCTAGTAACC CACGCGTCCGGGTTGTGAACTATATCATTAAATTGAAGCGTGCTGTTCGC CTTTGGTATATATGATCAATCCAACCTCTTTGTCGTCATTTTACGTCTAC CGTATTTTCCTCGGAATGCTGGGTTGATCTAATCACATTCCCCATTAGCT TCAGAAGACAGCTAGCTGGTAGAAAGGGTTCTTATGGTGTATGCAACGTT GTTGTTGTTTTTTGCACACGATGATTACAACGGCGCTCTTAAGCCTGATC AAGAGCATCAAGGCCGGGAAGGGGCATCTGGCGCTAGAGGAAGAACTCGA AACTGTGGGAGTGTCTGTTCATGGTATCAATTTTAAAAATGAGCGTAGGG GTGACACCGACATGAAGCTCTACGATTTGGCAGGGCAAGTGGAATACTAC GGCCTTCACCAATTGTTCCTAACGGAGAGGGCTTTATACGTCCTGATGTG GGATGCTTCCAGGTTTATGGACAAAATAACGGTAAGATACTTCCCTCTCA CCCCTAGAAATAAATTCGATGTATAATGATTAACTTGTTTTGACGCATCT AGAACCGTTAGAAGCATTTCTGCGTCATTCGTGCTTGGCTCTAGGGTAAC GGTCGAAGAATATAGGTATTCGACAGAGGTATTTCAGCCCCTTTCCTTTG GGTTCTAAAGCCTTGGGCTGTCATAGTTAGCGTCAAATCGTGTGACGGTA CCGTCAGTCATGGGCTAAATGACATTTTTATCCGACGAACCATGGTACTG CTATGATAGTCGAATCACGCATTAGGGTACGTATGTCTCCTGTGTGTCTT GCTACTTGTGATGAGGTGAGAAAATACGTTCCGTTGTCCCCTCTAACCGT GTTAAAGTGGCCATTTACCCCAGTTCTGCTGAAGCTCATTTGTCGAAGAA ATTATTATCACGGCATTGACGCATAGACTGGCGAGGTAGAGATCTTTTAA ATGCATTTTTAACGTTATTTTTATATAATGGCAACCCTTAATGTGCTATG TGATTTCTTTCTTACATTATCTATATCCCATCCTGATCGTGACATTGACT CATTGTCCTTAGTCCCAGGAGCTTGCGCATCATCTCAACGAGTGGCTGGT AACTCTCCATCTCAGGGCTCCACACTCGACTGTGCTTCTTTGCGGTACAC ACAAGGATAAATGTGTGCCAAGCAATATTCTGACCAAATCACTCGCGTGG TTGAAACGATCTCGCTCGATTGAAGCGATCCTAGAGGATGTTGAGTATTC AATCAAAGATAAGAACATGCAGTGGAAGAACGAGCAGTCACAAGGCAAAC ATTCGACATCCGTGAGAGGTCTGAAGCTGGAGTGTGGGATTCAGCTTATT AGCTCCTCTCCGACTTGTTACTGCGACAACGGCTTGGCCGATTTCCTGCA GCGGCTGAAGATATGTGGAGATAGTACGCGGTGGTTGATCCCACCATCGT GGCGTCTTGCTTTAGTGGTGCTGGATGCCGTCCGTGATGGAATCGACCCA GTAAAAGCTGCTCGATGCCACATAAACCCCAACGACCCGCTTCCAGTCGC ATCGTCGAGTAAAATATGTTGGGTACCATGTGTGCAGCTCCAGATATCCT GGAAGAGTGTTCTTAATCCCCTCGAGCTTGATCTTCCGCCCGAGGTCCGA CCCGACGACCCTGAGTTTACGCTACAGAGCGTCATCGACATGAGGTAAGA AATTATAGAAAACCTAATGCCACATAATTGTTTTTTTCCGTAGCGACAAA CGGCCGTAGTCCAACTTTGTTGTCATCCACGTCTTGTCCTGAGAACTTTG TACCGCAAACGCAGCTGAGTTTAGAGCCATTAACGAACTCTCCTCTTCAC GAGCGTGATAGACAGCCGTGGTAGCAGAGGTTCACTATGCACTTATCCGC TCTGTTCCCAACAAGCTGAGGCTCTCATATATTCATCACACGTGTGACAT TTGTTTCAATCAAGCTTATTTTATTTAGGTTGTTTTCGCGACTGACGATG TTATAAATTTAATGAGTACAGTTGCTCGTGACTTGAGGATTAAAAGTTTT CAACAAAATTTGTCATTCGTATTTTGTGGTCGGGGCTAGTGACTGATTAA GTTTTTACTCTTGTTGTTCCACCTCTTACTGTTTTCTCTCATTGCGATGT TTCGATTTTTTCCATCCATCAGAGAACGCGCTGGGTCGCTTCTGAAACAC CCTCGAGGGGTTTTCTTGGACGTGGAAGATTTCGCTCTCTCGCTCGCTCC TATTCTCAATCATAAAACACAGCAAAACGACTCTCGTGGTGTAGCCGTTT TCGCGGACCGCAAACTCGACTCACAATGGAAGTTAAACGCGAGGACGCGG CTCGTGAGGATGGGGATACTCGAAAGAGAATTCGCCTTGTTTTTGTGGAA GGAGGACGGTGTTTTGCCGGAGCAGACTTTCGACGTCCTTGTCAAGCTTG GGATTCTTCTACCCCTGCCTCGGAGAGATGAACAAGGCGTATATCGTCCT TGCGACTGGGAGAGCACGGCGGCTTGGGACTGCATCGAAGAATACTTGGT ATTGATGCGACTGCCGCTAAACCCCACTCATAAGACCTTGGCTCGCTTTA ATGCATTCGAAAGGCTTCGTGGTGATTGGGGGGTGGTGGTGAGGTGGGAA TTTAAGGTAGGGAGTACCCCCCATGGTCTGGTGGAACGGCTCGTGGCATC CTGCCACGCCATCGGTAACGTTGTGCGGGACACGTGCTGGAGGAGAGGTG CTTGCTTTGTCTGTCACAAAGCGAGCTTTGATGCTGCAGGTGGCTCCTTC GCTCTAGCATTGAAATTCACCCAAAGTTCCACATCAAACATACCAACAAC GGGAACTTTGGTCGTTCAAGCGTTCGGAAATAGAAAGGGTCGTGCTCTAT GGGGGGCTCTTCGTTTCGTTATTTCAGCCGCTTGGGATATATTTCAAGAG TTCCCAGGACTTCGTTGGGAAGCCTGGGTTGAGTGTCCGAAGCACCATGG GCAACTGCAGCACTACCTCGCATGCGTCGACGACAGCGAGGTTTGCGTTG CGTGCTGGATAACGGTTTATTTCCGCTTCTTTCAAACTATGATTTTATAC GACACATTTACGACCAGTATTAGGGTTTGTAGACTGTCCCCATGTTGGCT TCTTTTATCGTGCGTTCACTATTGCCATGTGTCTAAGATACCCACAGGAT ATTTCAACTTTTTCTTTTCGTACATAATTTATTGGTTTACTTGACTACCT TGCAACTACAGGAAATGTCACCAGGTCGCTCAATAATACGTCCGTATGAA AGCCCAATTTGTGGCTGCACGGAAGGCGTGGCATCAAGCTTAGGCAAAGT GCTGCGGAGATCACCAACATGGGGTAAGAAACGTGATTTCGTGAATAGAA GTATTGAAGTTTCTAAAATAGTCGAATGTATTTGGCTTCGATTTATGTTA TTCTAACTCCCTCCGGCCGCCGTCGTACTACTTCCTCCAGCATTCTATAT TAAAAATCCCGTGATTCGTAATTTGGTGTTCACCAAAAGGTCACTATATT TGGTTGTCAGAACCACCCTGCGCAACAAGTCGAAATATTACTATTAGTTT ATTATAACATAATGATAGAAGCACGTAAGCTGTTGCTATGAAATCCCCAT AAATGGTGACTCTTTCTGCCCCCTTCAACTTGATGTCATGTATCATTAGG TGTATATGTTTTGCTTTTTTTGGCCCATCTATTGTTACACACGCGATGAT CGCTACAGTAGCCAATACAATCTATACACGGTCATGTATGGTCAATAATC CCATCGTAGATCCGTCTCATCTTGATGATGTGTTCAAGACTGGAGATAGA AGCAGCCAGTATGCTCGAAGCTTCAATGACGACGGAGAGCAACGATTCAA GGCGGCTATCGACATTGCTCTGGACGCCACAGTGAGAATGTGTATATATA TTTTCATCTTACAGCGGTTGTGTTTCTTCGATCCCGTAAGATATGTTGTG ATCGCAAGAACTAAAACAACTGAGAACCCAATGGTTCTTCCTCCCTTTTT GTTATATTTTTGCGTTCACAACTCGGAGGCCAAAGCAGCTCCAGAGGTAT CACGGAGTGTTGACTCACTTGAATCGTTTTTGCTCAGACCAGCTGTTCTG CCTTAAATTAGTGTCGGGTTTTCACGACATTTTAAAATATGGTATATCCT CTTTAGAAATATTACGTCATTTCCACGTCGATACTACCCGATATCGTGTC ACAACCAGCGTTTTTGTGGAAATATGTCAAGAAAATATGTTAACGTGAGC CTACTGGATGTGCACTAGTTACCCTTATTGCGGCAATAATATGGGTGGTC TAAAGTGCCCTTAGTGTCAGGAATGTGGTGTCGTATTATGGCCTTCCTCT GAAGGGCAGTTTGTCAACCGCGTCTATAGCACATGTAAGAATCTAATTCG TCTTAAAACACATGCCTAACATAAGCTAGTTTCGGAGGTATCATTGGCCC GCCAATTGTTTCCTAACATATGCCCTTTGTAGTCTAATTCAAAATTAAAG ACGGCAACATCATGGCCGTTAAACTGTTTGTAAGTCGTGTCGTTTACTTT GCTGTTTTAAACGTATATGATCTCCAACCTTTAATCGTATTCTCATTGAA GCTTGCCTTCGCATTCATCACTTCAAATGCCGCAGCAAGAAATTCCGACC ATGGACGAGGCAAGAGAAAGCGAAGGGTGGAAGACGCCGGAGTGGGTGAA AGATGCCTTATTTGCAGGACCGATGGGGTTGTTTACCTTGTACGAAACCT GGGTCCCTTTGCTGAATGTGGCCGATTACTGGCGCGACGGACCGCTTGTA CAGGCTATCTCATGCACGGCCTTCGCCATGGTTCTGGCTGTCGCAGTGGC GGTTGCAGCAGTGTGCTTTTTCAAGAAGCTGCGCCGTACATATGGGTGGT GGCCACCTCGAACAAACATAAAGAGCGACTAGAGGCGAAGATGGAGTTTG TTGCATCTTCTGTTTGTCAGTTCCGCTAAAAGGTTGACTAGTTTATGTCG ACTCCATGGGATCGGAGTCGAGGGGACAAGGAAGCTTTAGATTTGCCTAA TAAAAAAACAATTGGGTATGGCCTGTTAAACTTACCGATGGATCTTACCT CTCTGACTTGCAGCGCTACTTATTGTGCGGATGGCGAAATTCCTCTTACT CTAACTTCATCGAAACGAGGCACCTACCTTGTACATTGCCTGGAACCCGT GGCGTAATCTCAACTCTTGGCTGTGATGGAGGACTATGCCGGCGCCGATA CCAGCGCAATATTGTGGCGATTATATTTTTATCCAGAGTGTTTGGTATGT TTATATATTTATTTATTTAAACAAATTAAACTAATTCAACCCTCTTAACA TCCACACCCTCATTACACCACGAGTAGGCAAGTCAGGTAAATCAATTATA TTTATGTTTTAGTGCGTAGATTACTATCTATAAAAATAAATCTTTACTGG AAAGTAGGTTTGGAATACAAGGAGTGGTTCAAGGTCACGGAATAATGGAA AGCCTATCCGGGAAAACGGCAGCGCTGGCTGGCATATAAGGACTGATGTT GCCCCGTTGTGTAATACGCTAGGGCTCTGCAAGGGAGGGATGAATGTGAA GAAACTATTTGAAGATTTCACCTTTAAAACGATTTGGGTTTGAACCTCGT GCGCGTCGGGAGATTGAAGCTATTGGAACTACATTAACGTTTCTCTGTTG CAGCCGGATACATGAACCGGACATCGATGCTTGGATACCGATATCTAGGA TCGTGATATTCAAACAACATCATGCTCGTTAACCCGTGTCTTGATATTGC TGTGAAGGGGAGGCTTCGGGGCCTGACGAAACGTCAGATAAGATTATATG TCTGCACACCCGGAAAATGTGCTTATAGCAGGTGGTTGGCCTAGGCTAAG ATCGAGAAATATAAAATTAAGGCGAAGATTAAATATATCAGCGTGGTTTT CTTTTTCGCTACTAATTACCTGTTATTATTTTATGTTTGCGACTCTCGAA TTGGATAAAAAATAGATATATAAAGAGAAATATGAGGCGGACTTGTTAGA TTATATTGGGAAGAAAACTTTGCTTAACGAAATAGGACAATACCTTTTTC ACATCAATCTGGCAAAGGCGTATCAACGCCGCAAACACGAATTACAAAAC TCTAATATGGAAAAGTGTTGTGCAAAGCGAAAACCGCTTACCTCGATGTC GACATCTGCTACTTGAAAGCAAGAGCTTGACCCAACTCTTTTGCGTCGGT GGCTCAGTCCTTTTTTACAGGGCTGATATATTCAACACTGTTGTGCTCTT TATCATTACTGCTCTTGTGTTTCATGGAATCAATATGATGTTTTCTTTGT ACAGTGTTACAAGCATTTTCCTCCACTTCGTGCATCACCCAAATAGTGGT TTTTCTATTATTATAGTCTTTTCGTGAACAGATGAGTCCAGAGGGAGAAT TCCGTTACAAGTAGTAGGGGGGCGTGGTCGCAGAGCTGGGTTTATCTTTG GCTTTTTTTAATATATTCGAGAC
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Coding sequence (CDS) from alignment at H-elongata_contig200:10906..23378-

>mRNA_H-elongata_contig200.5631.1 ID=mRNA_H-elongata_contig200.5631.1|Name=mRNA_H-elongata_contig200.5631.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5040bp|location=Sequence derived from alignment at H-elongata_contig200:10906..23378- (Himanthalia elongata Himel1 dioecious)
ATGCTTTACCTTTTCAGCAACCAACTGAGCGATGCTTTACCTTTTCAGCA
ACCAACTGAGCGGGTTGGGAATGGGGGAAGACGCACGCACGATCCTAGGT
CTGTTGTCGCGCTGCACACACTATTTGGAAAACAATCCATGGGAATGCCC
TCCAGCACCTGTGGTCGAAAAGGGCATCGATGCCATGAAGAAGTACTACG
GCGAGCTCGTAAAGACAAAACCTGTCTTGATCGACTTGCGCAAGGTTGTG
TTCATCGGACACAGCGGATCTGGCAAAACCAGGGTTGGGAATGGGGGAAG
ACGCACGCACGATCCTAGGTCTGTTGTCGCGCTGCACACACTATTTGGAA
AACAATCCATGGGAATGCCCTCCAGCACCTGTGGTCGAAAAGGGCATCGA
TGCCATGAAGAAGTACTACGGCGAGCTCGTAAAGACAAAACCTGTCTTGA
TCGACTTGCGCAAGGTTGTGTTCATCGGACACAGCGGATCTGGCAAAACC
AGCCTGATCAAGAGCATCAAGGCCGGGAAGGGGCATCTGGCGCTAGAGGA
AGAACTCGAAACTGTGGGAGTGTCTGTTCATGGTATCAATTTTAAAAATG
AGCGTAGGGGTGACACCGACATGAAGCTCTACGATTTGGCAGGGCAAGTG
GAATACTACGGCCTTCACCAATTGTTCCTAACGGAGAGGGCTTTATACGT
CCTGATGTGGGATGCTTCCAGGTTTATGGACAAAATAACGCCTGATCAAG
AGCATCAAGGCCGGGAAGGGGCATCTGGCGCTAGAGGAAGAACTCGAAAC
TGTGGGAGTGTCTGTTCATGGTATCAATTTTAAAAATGAGCGTAGGGGTG
ACACCGACATGAAGCTCTACGATTTGGCAGGGCAAGTGGAATACTACGGC
CTTCACCAATTGTTCCTAACGGAGAGGGCTTTATACGTCCTGATGTGGGA
TGCTTCCAGGTTTATGGACAAAATAACGTCCCAGGAGCTTGCGCATCATC
TCAACGAGTGGCTGGTAACTCTCCATCTCAGGGCTCCACACTCGACTGTG
CTTCTTTGCGGTACACACAAGGATAAATGTGTGCCAAGCAATATTCTGAC
CAAATCACTCGCGTGGTTGAAACGATCTCGCTCGATTGAAGCGATCCTAG
AGGATGTTGAGTATTCAATCAAAGATAAGAACATGCAGTGGAAGAACGAG
CAGTCACAAGGCAAACATTCGACATCCGTGAGAGGTCTGAAGCTGGAGTG
TGGGATTCAGCTTATTAGCTCCTCTCCGACTTGTTACTGCGACAACGGCT
TGGCCGATTTCCTGCAGCGGCTGAAGATATGTGGAGATAGTACGCGGTGG
TTGATCCCACCATCGTGGCGTCTTGCTTTAGTGGTGCTGGATGCCGTCCG
TGATGGAATCGACCCAGTAAAAGCTGCTCGATGCCACATAAACCCCAACG
ACCCGCTTCCAGTCGCATCGTCGAGTAAAATATGTTGGGTACCATGTGTG
CAGCTCCAGATATCCTGGAAGAGTGTTCTTAATCCCCTCGAGCTTGATCT
TCCGCCCGAGGTCCGACCCGACGACCCTGAGTTTACGCTACAGAGCGTCA
TCGACATGAGTCCCAGGAGCTTGCGCATCATCTCAACGAGTGGCTGGTAA
CTCTCCATCTCAGGGCTCCACACTCGACTGTGCTTCTTTGCGGTACACAC
AAGGATAAATGTGTGCCAAGCAATATTCTGACCAAATCACTCGCGTGGTT
GAAACGATCTCGCTCGATTGAAGCGATCCTAGAGGATGTTGAGTATTCAA
TCAAAGATAAGAACATGCAGTGGAAGAACGAGCAGTCACAAGGCAAACAT
TCGACATCCGTGAGAGGTCTGAAGCTGGAGTGTGGGATTCAGCTTATTAG
CTCCTCTCCGACTTGTTACTGCGACAACGGCTTGGCCGATTTCCTGCAGC
GGCTGAAGATATGTGGAGATAGTACGCGGTGGTTGATCCCACCATCGTGG
CGTCTTGCTTTAGTGGTGCTGGATGCCGTCCGTGATGGAATCGACCCAGT
AAAAGCTGCTCGATGCCACATAAACCCCAACGACCCGCTTCCAGTCGCAT
CGTCGAGTAAAATATGTTGGGTACCATGTGTGCAGCTCCAGATATCCTGG
AAGAGTGTTCTTAATCCCCTCGAGCTTGATCTTCCGCCCGAGGTCCGACC
CGACGACCCTGAGTTTACGCTACAGAGCGTCATCGACATGAGAGAACGCG
CTGGGTCGCTTCTGAAACACCCTCGAGGGGTTTTCTTGGACGTGGAAGAT
TTCGCTCTCTCGCTCGCTCCTATTCTCAATCATAAAACACAGCAAAACGA
CTCTCGTGGTGTAGCCGTTTTCGCGGACCGCAAACTCGACTCACAATGGA
AGTTAAACGCGAGGACGCGGCTCGTGAGGATGGGGATACTCGAAAGAGAA
TTCGCCTTGTTTTTGTGGAAGGAGGACGGTGTTTTGCCGGAGCAGACTTT
CGACGTCCTTGTCAAGCTTGGGATTCTTCTACCCCTGCCTCGGAGAGATG
AACAAGGCGTATATCGTCCTTGCGACTGGGAGAGCACGGCGGCTTGGGAC
TGCATCGAAGAATACTTGGTATTGATGCGACTGCCGCTAAACCCCACTCA
TAAGACCTTGGCTCGCTTTAATGCATTCGAAAGGCTTCGTGGTGATTGGG
GGGTGGTGGTGAGGTGGGAATTTAAGGTAGGGAGTACCCCCCATGGTCTG
GTGGAACGGCTCGTGGCATCCTGCCACGCCATCGGTAACGTTGTGCGGGA
CACGTGCTGGAGGAGAGGTGCTTGCTTTGTCTGTCACAAAGCGAGCTTTG
ATGCTGCAGGTGGCTCCTTCGCTCTAGCATTGAAATTCACCCAAAGTTCC
ACATCAAACATACCAACAACGGGAACTTTGGTCGTTCAAGCGTTCGGAAA
TAGAAAGGGTCGTGCTCTATGGGGGGCTCTTCGTTTCGTTATTTCAGCCG
CTTGGGATATATTTCAAGAGTTCCCAGGACTTCGTTGGGAAGCCTGGGTT
GAGTGTCCGAAGCACCATGGGCAACTGCAGCACTACCTCGCATGCGTCGA
CGACAGCGAGAGAACGCGCTGGGTCGCTTCTGAAACACCCTCGAGGGGTT
TTCTTGGACGTGGAAGATTTCGCTCTCTCGCTCGCTCCTATTCTCAATCA
TAAAACACAGCAAAACGACTCTCGTGGTGTAGCCGTTTTCGCGGACCGCA
AACTCGACTCACAATGGAAGTTAAACGCGAGGACGCGGCTCGTGAGGATG
GGGATACTCGAAAGAGAATTCGCCTTGTTTTTGTGGAAGGAGGACGGTGT
TTTGCCGGAGCAGACTTTCGACGTCCTTGTCAAGCTTGGGATTCTTCTAC
CCCTGCCTCGGAGAGATGAACAAGGCGTATATCGTCCTTGCGACTGGGAG
AGCACGGCGGCTTGGGACTGCATCGAAGAATACTTGGTATTGATGCGACT
GCCGCTAAACCCCACTCATAAGACCTTGGCTCGCTTTAATGCATTCGAAA
GGCTTCGTGGTGATTGGGGGGTGGTGGTGAGGTGGGAATTTAAGGTAGGG
AGTACCCCCCATGGTCTGGTGGAACGGCTCGTGGCATCCTGCCACGCCAT
CGGTAACGTTGTGCGGGACACGTGCTGGAGGAGAGGTGCTTGCTTTGTCT
GTCACAAAGCGAGCTTTGATGCTGCAGGTGGCTCCTTCGCTCTAGCATTG
AAATTCACCCAAAGTTCCACATCAAACATACCAACAACGGGAACTTTGGT
CGTTCAAGCGTTCGGAAATAGAAAGGGTCGTGCTCTATGGGGGGCTCTTC
GTTTCGTTATTTCAGCCGCTTGGGATATATTTCAAGAGTTCCCAGGACTT
CGTTGGGAAGCCTGGGTTGAGTGTCCGAAGCACCATGGGCAACTGCAGCA
CTACCTCGCATGCGTCGACGACAGCGAGGAAATGTCACCAGGTCGCTCAA
TAATACGTCCGTATGAAAGCCCAATTTGTGGCTGCACGGAAGGCGTGGCA
TCAAGCTTAGGCAAAGTGCTGCGGAGATCACCAACATGGGGAAATGTCAC
CAGGTCGCTCAATAATACGTCCGTATGAAAGCCCAATTTGTGGCTGCACG
GAAGGCGTGGCATCAAGCTTAGGCAAAGTGCTGCGGAGATCACCAACATG
GGATCCGTCTCATCTTGATGATGTGTTCAAGACTGGAGATAGAAGCAGCC
AGTATGCTCGAAGCTTCAATGACGACGGAGAGCAACGATTCAAGGCGGCT
ATCGACATTGCTCTGGACGCCACAATCCGTCTCATCTTGATGATGTGTTC
AAGACTGGAGATAGAAGCAGCCAGTATGCTCGAAGCTTCAATGACGACGG
AGAGCAACGATTCAAGGCGGCTATCGACATTGCTCTGGACGCCACACAAG
AAATTCCGACCATGGACGAGGCAAGAGAAAGCGAAGGGTGGAAGACGCCG
GAGTGGGTGAAAGATGCCTTATTTGCAGGACCGATGGGGTTGTTTACCTT
GTACGAAACCTGGGTCCCTTTGCTGAATGTGGCCGATTACTGGCGCGACG
GACCGCTTGTACAGGCTATCTCATGCACGGCCTTCGCCATGGTTCTGGCT
GTCGCAGTGGCGGTTGCAGCAGTGTGCTTTTTCAAGAAGCTGCGCCGTAC
ATATGGGTGGTGGCCACCTCGAACAAACATAAAGAGCGACTAGCAAGAAA
TTCCGACCATGGACGAGGCAAGAGAAAGCGAAGGGTGGAAGACGCCGGAG
TGGGTGAAAGATGCCTTATTTGCAGGACCGATGGGGTTGTTTACCTTGTA
CGAAACCTGGGTCCCTTTGCTGAATGTGGCCGATTACTGGCGCGACGGAC
CGCTTGTACAGGCTATCTCATGCACGGCCTTCGCCATGGTTCTGGCTGTC
GCAGTGGCGGTTGCAGCAGTGTGCTTTTTCAAGAAGCTGCGCCGTACATA
TGGGTGGTGGCCACCTCGAACAAACATAAAGAGCGACTAG
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