mRNA_H-elongata_contig199326.5604.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A6G0X7I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7I6_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.660e-29 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 1 TDAEVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGK--LSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
T +V M PYR +VG+LM+LA TR L+F HQLS+F DN GP HWR A++AL+YL R + GG LSA++D DY CPDTRR VSG V++ G+ ISW ++ Q + ++E+E++AL+ + E ++
Sbjct: 1468 TPEDVSFMASKPYRSLVGSLMYLAMGTRPDLAFPLHQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDEDYANCPDTRRCVSGYVLLFLGSPISWLAKKQNIVTLSTTEAEFVALSLCIQECLYI 1610
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: UPI001EAF45B3 (secreted RxLR effector protein 161-like n=2 Tax=Osmia bicornis bicornis TaxID=1437191 RepID=UPI001EAF45B3) HSP 1 Score: 112 bits (279), Expect = 2.860e-28 Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 1
Query: 1 TDAEVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGKLSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNE 405
T+ E M Q+PYR ++G+LM+LAT TR ++ A LS+FNDN G HW+ A++ L+Y+ R +EI + +L + DAD+G D RRS +G V + G ISW SR QK A S+E+EY+AL++ E
Sbjct: 5 TEEERDRMNQVPYRSLIGSLMYLATSTRPDIAHAVSALSQFNDNPGEEHWKAAKRVLRYIKRTEKMEIVFTKTEN--ELIGFSDADWGASIDDRRSYTGYVFRLFGGAISWSSRKQKTVAMSSAEAEYMALSEAAKE 139
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A4S4KZ61_9AGAM (Uncharacterized protein (Fragment) n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KZ61_9AGAM) HSP 1 Score: 110 bits (275), Expect = 6.270e-28 Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 10 EVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGKL-SAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
E+ M+ +PYR++VGALM+LA TR +S+A L++F+ N GP HW+ A+ +YL +D+++TY +P +L + + DAD+G D RRS SG VV M ISW SR+Q + ++E+EYI+ E+ +L
Sbjct: 21 EIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWL 159
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.680e-28 Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 1 TDAEVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGK--LSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
T ++ M PYR +VG+ M+LA TR L+F QLS+F DN GP HWR A++AL+YL R + GG LSA++DADY CPDTRR VSG V++ G+ ISW ++ Q + ++E+E++AL+ + E ++
Sbjct: 619 TPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPISWLTKKQNIVTLSTTEAEFVALSLCIQECLYI 761
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA) HSP 1 Score: 117 bits (293), Expect = 8.130e-28 Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 1 TDAEVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGK--LSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
T ++ M PYR +VG+LM+LA TR L+F QLS+F DN P HWR A++AL+YL R + GG LSA++DADY CPDTRR VSG V++ G+ ISW ++ Q + ++E+E++AL+ + E ++
Sbjct: 1763 TPEDISFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPISWLAKKQNIVTLSTTEAEFVALSLCIQECLYI 1905
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0) HSP 1 Score: 110 bits (274), Expect = 1.150e-27 Identity = 56/143 (39.16%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 1 TDAEVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGK--LSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
TD EV+EM+QIPY+E VGAL++L+T TR +S+A Q++KFN N G HW+ ++ +YL R+ I + P G + + + DAD+ PD + S SG V + G + SWFSR Q T+ ++E+E++A + E ++
Sbjct: 5 TDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFFSPNPSGKEEEIVGFTDADHAGDPDDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWI 147
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A8J6HCF2_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HCF2_TENMO) HSP 1 Score: 108 bits (271), Expect = 1.420e-27 Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = 1
Query: 13 VKEMRQ------IPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGKLSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNE 405
+K+ RQ +PYRE++G+L +L+T TR +SFA L +FN+ G HW A++ L+YL DL + Y EP L+ ++DAD+G+C + RRS +G + ++ G +SW SR Q+ A ++E+EY+AL++ V E
Sbjct: 18 IKKQRQSNEELRLPYRELLGSLTYLSTTTRPDISFAVSHLGQFNNCYGEDHWTAAKRVLRYLKGTVDLGLVY--EPDSDPLTGFVDADWGSCTEDRRSFTGYIFLLNGGPVSWDSRKQRTVALSTTEAEYMALSEGVKE 154
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A4S4KXB7_9AGAM (Uncharacterized protein n=3 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KXB7_9AGAM) HSP 1 Score: 110 bits (275), Expect = 2.720e-27 Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 10 EVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGKL-SAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
E+ M+ +PYR++VGALM+LA TR +S+A L++F+ N GP HW+ A+ +YL +D+++TY +P +L + + DAD+G D RRS SG VV M ISW SR+Q + ++E+EYI+ E+ +L
Sbjct: 8 EIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWL 146
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A0A9Z317_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z317_LYGHE) HSP 1 Score: 110 bits (276), Expect = 7.390e-27 Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = 1
Query: 1 TDAEVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGKLSAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRF 414
T EV+EM +IPY+ +VG+LM+LAT TR +S + LS+FN G HW A++ L+YL + RD +T+ + G ++ ++DAD+G D R+S +G AG+ ISW SR Q+ A S+E+EY+AL + E +
Sbjct: 121 TPEEVEEMSKIPYQNLVGSLMYLATATRPDISHSVSVLSQFNSCYGSEHWVAAKRVLRYLKKTRDYGLTF--KKTGNRIVGYVDADWGASLDDRKSYTGYAFKFAGSCISWESRKQRTVALSSTEAEYMALTEATKEASY 258
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Match: A0A4V3X9U7_9AGAM (Uncharacterized protein n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3X9U7_9AGAM) HSP 1 Score: 110 bits (275), Expect = 7.770e-27 Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 10 EVKEMRQIPYREIVGALMWLATMTR--LSFAAHQLSKFNDNLGPTHWREAQKALQYLWRIRDLEITYGGEPGGGKL-SAWIDADYGTCPDTRRSVSGGVVMMAGATISWFSRVQKVTAAESSESEYIALADMVNELRFL 417
E+ M+ +PYR++VGALM+LA TR +S+A L++F+ N GP HW+ A+ +YL +D+++TY +P +L + + DAD+G D RRS SG VV M ISW SR+Q + ++E+EYI+ E+ +L
Sbjct: 57 EIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWL 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199326.5604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig199326.5604.1 >prot_H-elongata_contig199326.5604.1 ID=prot_H-elongata_contig199326.5604.1|Name=mRNA_H-elongata_contig199326.5604.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp MRQIPYREIVGALMWLATMTRLSFAAHQLSKFNDNLGPTHWREAQKALQYback to top mRNA from alignment at H-elongata_contig199326:293..712- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig199326.5604.1 ID=mRNA_H-elongata_contig199326.5604.1|Name=mRNA_H-elongata_contig199326.5604.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=420bp|location=Sequence derived from alignment at H-elongata_contig199326:293..712- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig199326:293..712- >mRNA_H-elongata_contig199326.5604.1 ID=mRNA_H-elongata_contig199326.5604.1|Name=mRNA_H-elongata_contig199326.5604.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig199326:293..712- (Himanthalia elongata Himel1 dioecious)back to top |