mRNA_H-elongata_contig19921.5598.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 1.920e-142 Identity = 272/515 (52.82%), Postives = 334/515 (64.85%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAV-SLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVP---SDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLS----------SGEHPS--FASPLRPNMKIAARDWGAYAHKLAIKS----------NGKVVST------------TGQDHERRACTQCG--------KYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASH---EGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
+VHHVLKDH YRKLALSLRR S++ A + +++ RVVGLTASY+YAVG+AK++ASL LC EL +T TA+R+EL + GY A+GA+AEV L P S + P GVVP ++KPH M TFFRRE G TAF+R M CVR ME+ S H + F+SP+ P+ K+A R+WGAYAHKLA+K+ K+ T TG +R CT+CG + +S + H+ LLAELEHWYEA+KT+VVSWEE ED+A IL+M GC A+S P+D + ++AFW VP TF RY+ LK VL +KY H + FRGIVFV QRVTTHVLAHVIA DP +A F ACLYASSSPATASLSV+KAQ+QASIE+FR GSVNLL+AT VAEEG+DIP ANCV+R+DAM H VS+VQ RGRAR+E SSFVVLS+R DRTTADLEAVE +Q RLV F+P
Sbjct: 137 EVHHVLKDHPYRKLALSLRRSSLTPPPPASPATGSSSHPRVVGLTASYSYAVGDAKIEASLTRLCHELRITATETATRQELEAGGYQAMGAAAEVLLDPRPDSAGTTDDTAPAGVVPEADQKPHEMGTTFFRREAKGTSTAFTRLLMACVRSMEEATAXXXXXXXXXXXSQPHQTLLFSSPMPPSGKLAPREWGAYAHKLALKAAXXXXXXXXXXAKMPETAAGRGMGGGGDFTGNSVAKR-CTRCGIDANAGQPRRSSSRPTLHL--LLAELEHWYEAVKTMVVSWEEREDDAATILDMFGCTGSPSHRAASEAVWPSD-----VRQKISAFWEAVPRTFRRYDKLKNVLLDKYDHHGXXXXXXXXXXXKKCFRGIVFVVQRVTTHVLAHVIAADPRLAPRFSAACLYASSSPATASLSVTKAQAQASIEAFRSGSVNLLLATVVAEEGIDIPKANCVVRYDAMMHGVSMVQGRGRAREEDSSFVVLSERPDRTTADLEAVERQQQRLVWGFRP 643
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A6H5L4Y7_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y7_9PHAE) HSP 1 Score: 389 bits (999), Expect = 1.560e-127 Identity = 241/468 (51.50%), Postives = 299/468 (63.89%), Query Frame = 1
Query: 4 VHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINR--KPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHV-TPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
VHH+LK H YRKLA SLR + + S + RV+GLTASY+Y G + KA L +L SEL +TN+ T S +EL + G HA A AEV L PS + P GV+P +R +P M F RER E T F+ + M CVR MEK + + EHP+FASPL + ++ A +WGAYAH LA G +T R C +Y+ Q V P+LAELEHWYEA+K LVVSWEE EDEA IL+M GC + P D + ++ FW VP TFPR+EHLK VL +KY H G S +E FRGIVFVRQRVTTHVLAHVIA DP+MA F ACL ASSSPATASLS+S+ +Q +E+FR GSVNLL++T+VAEEG+D+ ANCV+R+D+++H VS+VQ RGRAR E SSFVVL +R DRTTADLEAVE QL +RN +P
Sbjct: 8 VHHLLKGHPYRKLAQSLRHWQSRSTPSVLGTQ-----RVLGLTASYSYEFGNPRAKARLRALSSELCLTNIETVSHQELRAGGCHA--AMAEVLLPPSTV-----TPSGVLPEADRTQQPATM---FLLRERRNEGTDFAGRIMACVRGMEKAITAVSEHPTFASPLVLDGQMKACEWGAYAHSLAYNGAGGGGATN------RGCPT-NQYSRQPQPPSVHRPMLAELEHWYEAVKVLVVSWEEREDEAATILDMFGCTGSPSHRVAPEVVWPGD-----VRQKISVFWEAVPGTFPRFEHLKNVLLDKYDHHGGNGSGGSEGEAFRGIVFVRQRVTTHVLAHVIAADPSMAP-FSAACLCASSSPATASLSLSERATQEILEAFRSGSVNLLLSTAVAEEGIDVADANCVVRYDSIDHVVSMVQGRGRARGEKSSFVVLCERADRTTADLEAVEQRQLWQLRNIEP 447
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: D7FR00_ECTSI (ATP-dependent RNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR00_ECTSI) HSP 1 Score: 381 bits (978), Expect = 5.040e-119 Identity = 235/473 (49.68%), Postives = 292/473 (61.73%), Query Frame = 1
Query: 13 VLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHE----------RRACTQCGKYASGKQVGHV-TPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
+LK H YR+LA SL + + + SA+ RV+GLTASY+Y G AK + L L SEL +TN+ TAS +EL + G H V EV L PS + P GV+ NR TF RER E T FSR+ M CVR MEK + + EHP+FASPL + ++ R+WGAYAH LA G R C + +Y+ Q V P+LAELEHWYEA++ LVVSWEE EDEA +IL+M GC A P D + ++AFW VP FPR+EHLKKVL +KY H G S ++ F GIVFVRQR+TTHVLAHVIA DP MA F ACLYASSSP TASLS+S+ ++ ++E+FR GSVNLL++T VAEEG+D+P ANCV+R+D M+HAVS+VQ RGRAR SSFVVL +R DRTTADLEAVE QL +RN +P
Sbjct: 1 MLKKHPYRELAQSLCYWRLQSPPSALGTQ-----RVLGLTASYSYEFGNAKAEDRLRQLLSELCITNIETASGQELEAGGCHDVVT--EVLLPPS-----TATPSGVLLEANRTQQ-QATTFLLRERRHEGTDFSRRIMICVRSMEKAITAVSEHPAFASPLVLDGQMKTREWGAYAHSLAHNGAGXXXXXXXXXXXXXXXXXXGATNRGC-RTNRYSRQPQPPSVHRPMLAELEHWYEAVRALVVSWEEREDEAAIILDMFGCTGSPSHRAPPEAVWPGD-----VRQKISAFWEAVPRMFPRFEHLKKVLLDKYDHHGGDGSGSSDGEAFLGIVFVRQRMTTHVLAHVIAADPRMAPRFSAACLYASSSPTTASLSLSERDTEENLEAFRSGSVNLLLSTCVAEEGIDVPDANCVVRYDPMDHAVSMVQGRGRARGAESSFVVLCERADRTTADLEAVEQRQLWHLRNMEP 454
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO) HSP 1 Score: 338 bits (867), Expect = 1.420e-106 Identity = 220/469 (46.91%), Postives = 281/469 (59.91%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVL---KEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
+VHHVLKDH YRKLA L + + SA RV+GLTAS TYAVGE +V+A++ LC++L + ++++A+ EEL SSGYHA+ A AEV+ P D+ P VP GVVP RKPH+M +TFF R RN T +++ V ME V S+ P F +PL N + A WG YA++ +S PL A LEHWYEALK LVVSWEEA D A LEM G K Q+ + S AR A + FW +P++FPR+E+LK VL E +++ GG FRGIVF +QRV TH+L HVI RD ++S FRTAC+YA+SSPATASL+V+ QS+ ++ F G+VNLLIATSVAEEGMD+PA NC I FD M ++VS VQ RGRARQ S+FVVLS+R DR + L VE +QL +VR F P
Sbjct: 116 EVHHVLKDHPYRKLAQHLAQVNGSAP------------RVLGLTASLTYAVGEKQVEAAIRRLCTDLRIASMASATDEELRSSGYHALKAKAEVE--PVDI--PGAVPAGVVPAAWRKPHMMHETFFERLRNNTSTLAAQRLYAAVSAMEAQVSSAD--PEFRTPLH-NRSLKA--WGEYANRNKDRS---------------------------------PLYAALEHWYEALKILVVSWEEAADAAATFLEMCGEKAAQQHLLWSQAARQ----------AQSMFWNGLPESFPRFENLKDVLLYRHESFSAATGG---------FRGIVFAQQRVMTHILEHVIRRDEELSSCFRTACIYATSSPATASLAVTAHQSKRRLDQFASGAVNLLIATSVAEEGMDVPAMNCAICFDPMLNSVSFVQRRGRARQANSAFVVLSEREDRNASKLAEVEQQQLAIVRGFNP 511
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI) HSP 1 Score: 333 bits (853), Expect = 1.780e-104 Identity = 217/467 (46.47%), Postives = 279/467 (59.74%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL-RLVRNFKP 1398
+VHHVLKDH YR+LALSL + + + ++GL+AS TYAVGE KV+ + +C EL + +++TA EEL + GYH+ A ++P+ L PS VPEGV+P RKPHLM+ TFF R + G T F+++ + V+ +E V + F SPL+ A R WG YAHK + T C K LA LEHWYEAL+ LV SWEEAED AV L+M G + +AG P EA L FW + + FPR+EHLK L ++A+ S FRGI+FV+QR+ THVL HVI D + S F+ AC+YA+SSPATAS SVS A S+A + F +GSVNLLIAT VAEEGMD+PAANCVIRFD M ++VS VQ RGRARQE SSFVVLS+R DR T+ L AVE++QL ++VR+F P
Sbjct: 116 EVHHVLKDHPYRRLALSLSKLQLGPQ-------------ILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLETTVAAVDS--GFKSPLQ---NPAPRTWGDYAHKR--------IPT------------CSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PTAGLWPP-----VAEATLAQFWHEAGEYFPRFEHLKDALLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNP 509
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO) HSP 1 Score: 333 bits (853), Expect = 1.740e-100 Identity = 217/467 (46.47%), Postives = 279/467 (59.74%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL-RLVRNFKP 1398
+VHHVLKDH YR+LALSL + + + ++GL+AS TYAVGE KV+ + +C EL + +++TA EEL + GYH+ A ++P+ L PS VPEGV+P RKPHLM+ TFF R + G T F+++ + V+ +E V + F SPL+ A R WG YAHK + T C K LA LEHWYEAL+ LV SWEEAED AV L+M G + +AG P EA L FW + + FPR+EHLK L ++A+ S FRGI+FV+QR+ THVL HVI D + S F+ AC+YA+SSPATAS SVS A S+A + F +GSVNLLIAT VAEEGMD+PAANCVIRFD M ++VS VQ RGRARQE SSFVVLS+R DR T+ L AVE++QL ++VR+F P
Sbjct: 116 EVHHVLKDHPYRRLALSLSKLQLGPQ-------------ILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLETTVAAVDS--GFKSPLQ---NPAPRTWGDYAHKR--------IPT------------CSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PTAGLWPP-----VAEATLAQFWHEAGEYFPRFEHLKDALLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNP 509
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO) HSP 1 Score: 315 bits (806), Expect = 2.340e-97 Identity = 209/466 (44.85%), Postives = 268/466 (57.51%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
+VHHVLK+H YR+LALSL R Q V+GL+AS TYAVGE +V+ L + EL + +++TA+ EL + GYH+ A + P+ L P VPEGV+P+ RKPHLM FF R + G T F+++ ++ VR ME V S E F SPL+ A R WG YAH R Q K+AS LEHWYEAL+ LV SWEEAED A L M G + S P++ +EAA FW D+FPR EHLK L +Y E+ +FR I+FV+QR+ TH+L H + D A+A+ AC+YA++SPAT S VS A S+A + SF +G +NLLIAT VAEEGMD+PAANCVIRFD M ++VSLVQ RGRARQ SSFVVL +R DR T+ L AVE++QL ++RNFKP
Sbjct: 132 EVHHVLKEHPYRQLALSLSRLPAGPPQ------------VLGLSASLTYAVGEQRVEQELARISRELRIQHMATATAWELEAGGYHSKAGQATL---PTWNL-PCSVPEGVLPIGERKPHLMAKKFFDRLQEGASTPFTQRLLSVVRAMESAVAS--EDSGFKSPLQ---NPAPRMWGDYAH--------------------RRVGQSAKFAS-------------LEHWYEALRMLVTSWEEAEDAATTYLRMVGEGQ------SKPFTWPSE-----VEAASAQFWHNSADSFPRLEHLKDALLYEY------ETLSTTHGSFRCILFVQQRIMTHILEHFVRTDEALANRLNPACIYATASPATPSFRVSAADSKARLASFAKGGINLLIATVVAEEGMDVPAANCVIRFDPMINSVSLVQGRGRARQPDSSFVVLCERQDRPTSTLAAVEAQQLEIIRNFKP 526
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A812IWI1_SYMPI (CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWI1_SYMPI) HSP 1 Score: 321 bits (823), Expect = 7.130e-94 Identity = 217/481 (45.11%), Postives = 274/481 (56.96%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLK---EKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL------------RLVRNFKP 1398
+VHHVLKDH YRKLALSL + + Q V+GL+AS TYA+GE KV++ L +C EL + +++TAS EL + GYH+ A A ++P L P+ PEGV+PV RKPHLM F+ R + G+ T F++Q ++ VR ME V SF SPL+ A R WG YA+K I + +S LEHWYEAL+ LV SWEEAED A L M G RL + GA P + +E A FW K PD+FPR+EHLK L EK + G +FRGIVFV+QR+ TH+L H+I D +AS AC+YA++SPAT S VS A S+A + F G +NLLIAT VAEEGMD+PAANCVIRFD M +AVS VQ RGRARQ SSFVVLS+R DR T+ L AVE++QL R+V+NF P
Sbjct: 2106 EVHHVLKDHPYRKLALSLSKLTDGRPQ------------VLGLSASLTYAIGERKVESDLTRICRELNIQHMATASENELEACGYHSRPAEA---VLPVSL--PNVTPEGVLPVERRKPHLMASKFWERAQQGKSTQFTKQLLSVVRLMEAAVAEVDA--SFESPLQHP---APRTWGEYANKR-IPQSANFMS--------------------------------LEHWYEALRMLVTSWEEAEDAATTYLRMVGQTRL------TVGAWPLE-----VETACVRFWEKRPDSFPRFEHLKDALLYELEKLSKLHG---------SFRGIVFVQQRIMTHILEHLIQNDGDLASKLTPACIYATTSPATPSFRVSAADSKARLAEFANGRINLLIATVVAEEGMDVPAANCVIRFDPMINAVSFVQGRGRARQADSSFVVLSERQDRPTSTLAAVEAQQLQKLRPTFESSFGRIVQNFNP 2511
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A813AFJ5_9DINO (DCL2A protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AFJ5_9DINO) HSP 1 Score: 282 bits (722), Expect = 4.440e-87 Identity = 186/395 (47.09%), Postives = 233/395 (58.99%), Query Frame = 1
Query: 214 LSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
++TA EEL + GYH+ A ++P+ L PS VPEGV+P RKPHLM+ TFF R + G T F+++ + VR +E V + SF SPL+ A R WG YAHK + T C K LA LEHWYEAL+ LV SWEEAED AV L+M G + +AG P EA L FW + + FPR+EHLK L ++A+ S FRGI+FV+QR+ THVL HVI D + S F+ AC+YA+SSPATAS +A S+A + F +GSVNLLIAT VAEEGMD+PAANCVIRFD M +VS VQ RGRARQE SSFVVLS+R DR T+ L AVE++QL +VR+F P
Sbjct: 1 MATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVRCLETAVAAVDS--SFKSPLQ---NPAPRTWGDYAHKR--------IPT------------CSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PAAGLWPP-----VAEATLAQFWHEAVECFPRFEHLKDTLLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASY---RADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMISSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEIVRSFNP 332
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A2V3IZ19_9FLOR (Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ19_9FLOR) HSP 1 Score: 249 bits (635), Expect = 4.760e-73 Identity = 182/463 (39.31%), Postives = 248/463 (53.56%), Query Frame = 1
Query: 1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSR-VPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDT-FPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLV 1383
+VHH LK H YR LALSL+R +A RVVGLTAS+TYA+ + + L +LC+E + + TA EL S GYHA A + PS++ +R VP V+P R+PHLM+ TF R + T ++Q V ME VV + S S LR + R W K A N +++ T LL +L HWYEAL+ L+V+WEE E AV L+M C + + P A + +FW +V F R LK+VL ++ A + FRGI+FV+QRV TH++ H I D + ++ R C+YASS+ AT LSVSK+++ IE+FR G++NLLIATSVAEEGMDIPAANCVIRFD ++ VS VQ RGRAR EGS+FVV+ + +++A VESE ++L+
Sbjct: 125 EVHHALKKHPYRTLALSLKRCK------------SAHPRVVGLTASFTYALAQQRATNVLKTLCNEFQFSAVQTAPAHELKSGGYHASSAGS----TPSNVQPLARTVPANVLPPQQRQPHLMLHTFLDRCEAKQATQTAQQIFQVVLSMESVVHARDR--SLDSQLRHVRNV--RKWSGNTFKRATAHNQQIMRT---------------------------LLTQLCHWYEALRLLIVTWEEDEFAAVWFLKMMKCN-----LNDAIQVWPEHCARH-----VRSFWYRVNTLQFDRLVCLKQVLLQQDAQRRADGVA------FRGIIFVQQRVYTHMIEHYIESDQQLQAVLRCGCVYASSTSATPLLSVSKSKAAERIEAFRTGAINLLIATSVAEEGMDIPAANCVIRFDTVQSTVSFVQGRGRARLEGSAFVVMKESAAKSSARFAQVESEHMKLL 524 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19921.5598.1 >prot_H-elongata_contig19921.5598.1 ID=prot_H-elongata_contig19921.5598.1|Name=mRNA_H-elongata_contig19921.5598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=466bp KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAback to top mRNA from alignment at H-elongata_contig19921:4604..6001- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19921.5598.1 ID=mRNA_H-elongata_contig19921.5598.1|Name=mRNA_H-elongata_contig19921.5598.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-elongata_contig19921:4604..6001- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19921:4604..6001- >mRNA_H-elongata_contig19921.5598.1 ID=mRNA_H-elongata_contig19921.5598.1|Name=mRNA_H-elongata_contig19921.5598.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2796bp|location=Sequence derived from alignment at H-elongata_contig19921:4604..6001- (Himanthalia elongata Himel1 dioecious)back to top |