mRNA_H-elongata_contig19921.5598.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19921.5598.1
Unique NamemRNA_H-elongata_contig19921.5598.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 1.920e-142
Identity = 272/515 (52.82%), Postives = 334/515 (64.85%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAV-SLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVP---SDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLS----------SGEHPS--FASPLRPNMKIAARDWGAYAHKLAIKS----------NGKVVST------------TGQDHERRACTQCG--------KYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASH---EGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
            +VHHVLKDH YRKLALSLRR S++    A  +  +++  RVVGLTASY+YAVG+AK++ASL  LC EL +T   TA+R+EL + GY A+GA+AEV L P   S   +    P GVVP  ++KPH M  TFFRRE  G  TAF+R  M CVR ME+              S  H +  F+SP+ P+ K+A R+WGAYAHKLA+K+            K+  T            TG    +R CT+CG        + +S +   H+  LLAELEHWYEA+KT+VVSWEE ED+A  IL+M GC       A+S    P+D     +   ++AFW  VP TF RY+ LK VL +KY  H            +  FRGIVFV QRVTTHVLAHVIA DP +A  F  ACLYASSSPATASLSV+KAQ+QASIE+FR GSVNLL+AT VAEEG+DIP ANCV+R+DAM H VS+VQ RGRAR+E SSFVVLS+R DRTTADLEAVE +Q RLV  F+P
Sbjct:  137 EVHHVLKDHPYRKLALSLRRSSLTPPPPASPATGSSSHPRVVGLTASYSYAVGDAKIEASLTRLCHELRITATETATRQELEAGGYQAMGAAAEVLLDPRPDSAGTTDDTAPAGVVPEADQKPHEMGTTFFRREAKGTSTAFTRLLMACVRSMEEATAXXXXXXXXXXXSQPHQTLLFSSPMPPSGKLAPREWGAYAHKLALKAAXXXXXXXXXXAKMPETAAGRGMGGGGDFTGNSVAKR-CTRCGIDANAGQPRRSSSRPTLHL--LLAELEHWYEAVKTMVVSWEEREDDAATILDMFGCTGSPSHRAASEAVWPSD-----VRQKISAFWEAVPRTFRRYDKLKNVLLDKYDHHGXXXXXXXXXXXKKCFRGIVFVVQRVTTHVLAHVIAADPRLAPRFSAACLYASSSPATASLSVTKAQAQASIEAFRSGSVNLLLATVVAEEGIDIPKANCVVRYDAMMHGVSMVQGRGRAREEDSSFVVLSERPDRTTADLEAVERQQQRLVWGFRP 643          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A6H5L4Y7_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y7_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 1.560e-127
Identity = 241/468 (51.50%), Postives = 299/468 (63.89%), Query Frame = 1
Query:    4 VHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINR--KPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHV-TPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
            VHH+LK H YRKLA SLR +   +  S +        RV+GLTASY+Y  G  + KA L +L SEL +TN+ T S +EL + G HA  A AEV L PS +      P GV+P  +R  +P  M   F  RER  E T F+ + M CVR MEK + +  EHP+FASPL  + ++ A +WGAYAH LA    G   +T       R C    +Y+   Q   V  P+LAELEHWYEA+K LVVSWEE EDEA  IL+M GC        +     P D     +   ++ FW  VP TFPR+EHLK VL +KY  H G  S  +E   FRGIVFVRQRVTTHVLAHVIA DP+MA  F  ACL ASSSPATASLS+S+  +Q  +E+FR GSVNLL++T+VAEEG+D+  ANCV+R+D+++H VS+VQ RGRAR E SSFVVL +R DRTTADLEAVE  QL  +RN +P
Sbjct:    8 VHHLLKGHPYRKLAQSLRHWQSRSTPSVLGTQ-----RVLGLTASYSYEFGNPRAKARLRALSSELCLTNIETVSHQELRAGGCHA--AMAEVLLPPSTV-----TPSGVLPEADRTQQPATM---FLLRERRNEGTDFAGRIMACVRGMEKAITAVSEHPTFASPLVLDGQMKACEWGAYAHSLAYNGAGGGGATN------RGCPT-NQYSRQPQPPSVHRPMLAELEHWYEAVKVLVVSWEEREDEAATILDMFGCTGSPSHRVAPEVVWPGD-----VRQKISVFWEAVPGTFPRFEHLKNVLLDKYDHHGGNGSGGSEGEAFRGIVFVRQRVTTHVLAHVIAADPSMAP-FSAACLCASSSPATASLSLSERATQEILEAFRSGSVNLLLSTAVAEEGIDVADANCVVRYDSIDHVVSMVQGRGRARGEKSSFVVLCERADRTTADLEAVEQRQLWQLRNIEP 447          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: D7FR00_ECTSI (ATP-dependent RNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR00_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 5.040e-119
Identity = 235/473 (49.68%), Postives = 292/473 (61.73%), Query Frame = 1
Query:   13 VLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHE----------RRACTQCGKYASGKQVGHV-TPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
            +LK H YR+LA SL  + + +  SA+        RV+GLTASY+Y  G AK +  L  L SEL +TN+ TAS +EL + G H V    EV L PS     +  P GV+   NR       TF  RER  E T FSR+ M CVR MEK + +  EHP+FASPL  + ++  R+WGAYAH LA    G                      R C +  +Y+   Q   V  P+LAELEHWYEA++ LVVSWEE EDEA +IL+M GC       A      P D     +   ++AFW  VP  FPR+EHLKKVL +KY  H G  S  ++   F GIVFVRQR+TTHVLAHVIA DP MA  F  ACLYASSSP TASLS+S+  ++ ++E+FR GSVNLL++T VAEEG+D+P ANCV+R+D M+HAVS+VQ RGRAR   SSFVVL +R DRTTADLEAVE  QL  +RN +P
Sbjct:    1 MLKKHPYRELAQSLCYWRLQSPPSALGTQ-----RVLGLTASYSYEFGNAKAEDRLRQLLSELCITNIETASGQELEAGGCHDVVT--EVLLPPS-----TATPSGVLLEANRTQQ-QATTFLLRERRHEGTDFSRRIMICVRSMEKAITAVSEHPAFASPLVLDGQMKTREWGAYAHSLAHNGAGXXXXXXXXXXXXXXXXXXGATNRGC-RTNRYSRQPQPPSVHRPMLAELEHWYEAVRALVVSWEEREDEAAIILDMFGCTGSPSHRAPPEAVWPGD-----VRQKISAFWEAVPRMFPRFEHLKKVLLDKYDHHGGDGSGSSDGEAFLGIVFVRQRMTTHVLAHVIAADPRMAPRFSAACLYASSSPTTASLSLSERDTEENLEAFRSGSVNLLLSTCVAEEGIDVPDANCVVRYDPMDHAVSMVQGRGRARGAESSFVVLCERADRTTADLEAVEQRQLWHLRNMEP 454          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO)

HSP 1 Score: 338 bits (867), Expect = 1.420e-106
Identity = 220/469 (46.91%), Postives = 281/469 (59.91%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVL---KEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
            +VHHVLKDH YRKLA  L + + SA             RV+GLTAS TYAVGE +V+A++  LC++L + ++++A+ EEL SSGYHA+ A AEV+  P D+  P  VP GVVP   RKPH+M +TFF R RN   T  +++    V  ME  V S+   P F +PL  N  + A  WG YA++   +S                                 PL A LEHWYEALK LVVSWEEA D A   LEM G K  Q+ +  S  AR           A + FW  +P++FPR+E+LK VL    E +++  GG         FRGIVF +QRV TH+L HVI RD  ++S FRTAC+YA+SSPATASL+V+  QS+  ++ F  G+VNLLIATSVAEEGMD+PA NC I FD M ++VS VQ RGRARQ  S+FVVLS+R DR  + L  VE +QL +VR F P
Sbjct:  116 EVHHVLKDHPYRKLAQHLAQVNGSAP------------RVLGLTASLTYAVGEKQVEAAIRRLCTDLRIASMASATDEELRSSGYHALKAKAEVE--PVDI--PGAVPAGVVPAAWRKPHMMHETFFERLRNNTSTLAAQRLYAAVSAMEAQVSSAD--PEFRTPLH-NRSLKA--WGEYANRNKDRS---------------------------------PLYAALEHWYEALKILVVSWEEAADAAATFLEMCGEKAAQQHLLWSQAARQ----------AQSMFWNGLPESFPRFENLKDVLLYRHESFSAATGG---------FRGIVFAQQRVMTHILEHVIRRDEELSSCFRTACIYATSSPATASLAVTAHQSKRRLDQFASGAVNLLIATSVAEEGMDVPAMNCAICFDPMLNSVSFVQRRGRARQANSAFVVLSEREDRNASKLAEVEQQQLAIVRGFNP 511          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI)

HSP 1 Score: 333 bits (853), Expect = 1.780e-104
Identity = 217/467 (46.47%), Postives = 279/467 (59.74%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL-RLVRNFKP 1398
            +VHHVLKDH YR+LALSL +  +  +             ++GL+AS TYAVGE KV+  +  +C EL + +++TA  EEL + GYH+  A     ++P+ L  PS VPEGV+P   RKPHLM+ TFF R + G  T F+++  + V+ +E  V +      F SPL+     A R WG YAHK         + T            C K             LA LEHWYEAL+ LV SWEEAED AV  L+M G +        +AG  P        EA L  FW +  + FPR+EHLK  L  ++A+      S      FRGI+FV+QR+ THVL HVI  D  + S F+ AC+YA+SSPATAS SVS A S+A +  F +GSVNLLIAT VAEEGMD+PAANCVIRFD M ++VS VQ RGRARQE SSFVVLS+R DR T+ L AVE++QL ++VR+F P
Sbjct:  116 EVHHVLKDHPYRRLALSLSKLQLGPQ-------------ILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLETTVAAVDS--GFKSPLQ---NPAPRTWGDYAHKR--------IPT------------CSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PTAGLWPP-----VAEATLAQFWHEAGEYFPRFEHLKDALLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNP 509          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO)

HSP 1 Score: 333 bits (853), Expect = 1.740e-100
Identity = 217/467 (46.47%), Postives = 279/467 (59.74%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL-RLVRNFKP 1398
            +VHHVLKDH YR+LALSL +  +  +             ++GL+AS TYAVGE KV+  +  +C EL + +++TA  EEL + GYH+  A     ++P+ L  PS VPEGV+P   RKPHLM+ TFF R + G  T F+++  + V+ +E  V +      F SPL+     A R WG YAHK         + T            C K             LA LEHWYEAL+ LV SWEEAED AV  L+M G +        +AG  P        EA L  FW +  + FPR+EHLK  L  ++A+      S      FRGI+FV+QR+ THVL HVI  D  + S F+ AC+YA+SSPATAS SVS A S+A +  F +GSVNLLIAT VAEEGMD+PAANCVIRFD M ++VS VQ RGRARQE SSFVVLS+R DR T+ L AVE++QL ++VR+F P
Sbjct:  116 EVHHVLKDHPYRRLALSLSKLQLGPQ-------------ILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLETTVAAVDS--GFKSPLQ---NPAPRTWGDYAHKR--------IPT------------CSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PTAGLWPP-----VAEATLAQFWHEAGEYFPRFEHLKDALLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNP 509          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO)

HSP 1 Score: 315 bits (806), Expect = 2.340e-97
Identity = 209/466 (44.85%), Postives = 268/466 (57.51%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
            +VHHVLK+H YR+LALSL R      Q            V+GL+AS TYAVGE +V+  L  +  EL + +++TA+  EL + GYH+    A +   P+  L P  VPEGV+P+  RKPHLM   FF R + G  T F+++ ++ VR ME  V S  E   F SPL+     A R WG YAH                    R   Q  K+AS             LEHWYEAL+ LV SWEEAED A   L M G  +      S     P++     +EAA   FW    D+FPR EHLK  L  +Y      E+      +FR I+FV+QR+ TH+L H +  D A+A+    AC+YA++SPAT S  VS A S+A + SF +G +NLLIAT VAEEGMD+PAANCVIRFD M ++VSLVQ RGRARQ  SSFVVL +R DR T+ L AVE++QL ++RNFKP
Sbjct:  132 EVHHVLKEHPYRQLALSLSRLPAGPPQ------------VLGLSASLTYAVGEQRVEQELARISRELRIQHMATATAWELEAGGYHSKAGQATL---PTWNL-PCSVPEGVLPIGERKPHLMAKKFFDRLQEGASTPFTQRLLSVVRAMESAVAS--EDSGFKSPLQ---NPAPRMWGDYAH--------------------RRVGQSAKFAS-------------LEHWYEALRMLVTSWEEAEDAATTYLRMVGEGQ------SKPFTWPSE-----VEAASAQFWHNSADSFPRLEHLKDALLYEY------ETLSTTHGSFRCILFVQQRIMTHILEHFVRTDEALANRLNPACIYATASPATPSFRVSAADSKARLASFAKGGINLLIATVVAEEGMDVPAANCVIRFDPMINSVSLVQGRGRARQPDSSFVVLCERQDRPTSTLAAVEAQQLEIIRNFKP 526          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A812IWI1_SYMPI (CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWI1_SYMPI)

HSP 1 Score: 321 bits (823), Expect = 7.130e-94
Identity = 217/481 (45.11%), Postives = 274/481 (56.96%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLK---EKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL------------RLVRNFKP 1398
            +VHHVLKDH YRKLALSL + +    Q            V+GL+AS TYA+GE KV++ L  +C EL + +++TAS  EL + GYH+  A A   ++P  L  P+  PEGV+PV  RKPHLM   F+ R + G+ T F++Q ++ VR ME  V       SF SPL+     A R WG YA+K  I  +   +S                                LEHWYEAL+ LV SWEEAED A   L M G  RL      + GA P +     +E A   FW K PD+FPR+EHLK  L    EK +   G         +FRGIVFV+QR+ TH+L H+I  D  +AS    AC+YA++SPAT S  VS A S+A +  F  G +NLLIAT VAEEGMD+PAANCVIRFD M +AVS VQ RGRARQ  SSFVVLS+R DR T+ L AVE++QL            R+V+NF P
Sbjct: 2106 EVHHVLKDHPYRKLALSLSKLTDGRPQ------------VLGLSASLTYAIGERKVESDLTRICRELNIQHMATASENELEACGYHSRPAEA---VLPVSL--PNVTPEGVLPVERRKPHLMASKFWERAQQGKSTQFTKQLLSVVRLMEAAVAEVDA--SFESPLQHP---APRTWGEYANKR-IPQSANFMS--------------------------------LEHWYEALRMLVTSWEEAEDAATTYLRMVGQTRL------TVGAWPLE-----VETACVRFWEKRPDSFPRFEHLKDALLYELEKLSKLHG---------SFRGIVFVQQRIMTHILEHLIQNDGDLASKLTPACIYATTSPATPSFRVSAADSKARLAEFANGRINLLIATVVAEEGMDVPAANCVIRFDPMINAVSFVQGRGRARQADSSFVVLSERQDRPTSTLAAVEAQQLQKLRPTFESSFGRIVQNFNP 2511          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A813AFJ5_9DINO (DCL2A protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AFJ5_9DINO)

HSP 1 Score: 282 bits (722), Expect = 4.440e-87
Identity = 186/395 (47.09%), Postives = 233/395 (58.99%), Query Frame = 1
Query:  214 LSTASREELTSSGYHAVGASAEVKLVPSDLLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1398
            ++TA  EEL + GYH+  A     ++P+ L  PS VPEGV+P   RKPHLM+ TFF R + G  T F+++  + VR +E  V +     SF SPL+     A R WG YAHK         + T            C K             LA LEHWYEAL+ LV SWEEAED AV  L+M G +        +AG  P        EA L  FW +  + FPR+EHLK  L  ++A+      S      FRGI+FV+QR+ THVL HVI  D  + S F+ AC+YA+SSPATAS    +A S+A +  F +GSVNLLIAT VAEEGMD+PAANCVIRFD M  +VS VQ RGRARQE SSFVVLS+R DR T+ L AVE++QL +VR+F P
Sbjct:    1 MATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVRCLETAVAAVDS--SFKSPLQ---NPAPRTWGDYAHKR--------IPT------------CSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PAAGLWPP-----VAEATLAQFWHEAVECFPRFEHLKDTLLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASY---RADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMISSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEIVRSFNP 332          
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Match: A0A2V3IZ19_9FLOR (Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ19_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 4.760e-73
Identity = 182/463 (39.31%), Postives = 248/463 (53.56%), Query Frame = 1
Query:    1 KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYAVGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSDLLSPSR-VPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREMEKVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDHERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVMILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDT-FPRYEHLKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAMASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEEGMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLV 1383
            +VHH LK H YR LALSL+R              +A  RVVGLTAS+TYA+ + +    L +LC+E   + + TA   EL S GYHA  A +     PS++   +R VP  V+P   R+PHLM+ TF  R    + T  ++Q    V  ME VV +     S  S LR    +  R W     K A   N +++ T                           LL +L HWYEAL+ L+V+WEE E  AV  L+M  C      +  +    P   A       + +FW +V    F R   LK+VL ++ A       +      FRGI+FV+QRV TH++ H I  D  + ++ R  C+YASS+ AT  LSVSK+++   IE+FR G++NLLIATSVAEEGMDIPAANCVIRFD ++  VS VQ RGRAR EGS+FVV+ +   +++A    VESE ++L+
Sbjct:  125 EVHHALKKHPYRTLALSLKRCK------------SAHPRVVGLTASFTYALAQQRATNVLKTLCNEFQFSAVQTAPAHELKSGGYHASSAGS----TPSNVQPLARTVPANVLPPQQRQPHLMLHTFLDRCEAKQATQTAQQIFQVVLSMESVVHARDR--SLDSQLRHVRNV--RKWSGNTFKRATAHNQQIMRT---------------------------LLTQLCHWYEALRLLIVTWEEDEFAAVWFLKMMKCN-----LNDAIQVWPEHCARH-----VRSFWYRVNTLQFDRLVCLKQVLLQQDAQRRADGVA------FRGIIFVQQRVYTHMIEHYIESDQQLQAVLRCGCVYASSTSATPLLSVSKSKAAERIEAFRTGAINLLIATSVAEEGMDIPAANCVIRFDTVQSTVSFVQGRGRARLEGSAFVVMKESAAKSSARFAQVESEHMKLL 524          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19921.5598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX57_9PHAE1.920e-14252.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L4Y7_9PHAE1.560e-12751.50Helicase C-terminal domain-containing protein n=1 ... [more]
D7FR00_ECTSI5.040e-11949.68ATP-dependent RNA helicase, putative n=1 Tax=Ectoc... [more]
A0A7S4V2U7_9DINO1.420e-10646.91Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A1Q9EU77_SYMMI1.780e-10446.47Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodiniu... [more]
A0A812TEW1_9DINO1.740e-10046.47DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A812RBN0_9DINO2.340e-9744.85DCL2A protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A812IWI1_SYMPI7.130e-9445.11CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]
A0A813AFJ5_9DINO4.440e-8747.09DCL2A protein n=1 Tax=Symbiodinium necroappetens T... [more]
A0A2V3IZ19_9FLOR4.760e-7339.31Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19921contigH-elongata_contig19921:4604..6001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score450.3
Seed ortholog evalue1.1e-123
Seed eggNOG ortholog2880.D7FQZ7
KEGG koko:K11592
KEGG Pathwayko05206,map05206
EggNOG free text desc.helicase activity
EggNOG OGsCOG0571@1,COG1111@1,KOG0354@2759,KOG0701@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categorymitochondrion
Exons1
Model size1398
Cds size1398
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930124.4340577-CDS-H-elongata_contig19921:4603..60011622930124.4340577-CDS-H-elongata_contig19921:4603..6001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19921 4604..6001 -
1691679290.3717883-CDS-H-elongata_contig19921:4603..60011691679290.3717883-CDS-H-elongata_contig19921:4603..6001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19921 4604..6001 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19921.5598.1prot_H-elongata_contig19921.5598.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19921 4604..6001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19921.5598.1

>prot_H-elongata_contig19921.5598.1 ID=prot_H-elongata_contig19921.5598.1|Name=mRNA_H-elongata_contig19921.5598.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=466bp
KVHHVLKDHLYRKLALSLRRFSISARQSAVSLPTTALLRVVGLTASYTYA
VGEAKVKASLGSLCSELLVTNLSTASREELTSSGYHAVGASAEVKLVPSD
LLSPSRVPEGVVPVINRKPHLMIDTFFRRERNGECTAFSRQFMTCVREME
KVVLSSGEHPSFASPLRPNMKIAARDWGAYAHKLAIKSNGKVVSTTGQDH
ERRACTQCGKYASGKQVGHVTPLLAELEHWYEALKTLVVSWEEAEDEAVM
ILEMGGCKRLQRMIASSAGARPTDKANATLEAALTAFWMKVPDTFPRYEH
LKKVLKEKYASHEGGESSENEQHTFRGIVFVRQRVTTHVLAHVIARDPAM
ASLFRTACLYASSSPATASLSVSKAQSQASIESFREGSVNLLIATSVAEE
GMDIPAANCVIRFDAMEHAVSLVQSRGRARQEGSSFVVLSQRTDRTTADL
EAVESEQLRLVRNFKP
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mRNA from alignment at H-elongata_contig19921:4604..6001-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19921.5598.1 ID=mRNA_H-elongata_contig19921.5598.1|Name=mRNA_H-elongata_contig19921.5598.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-elongata_contig19921:4604..6001- (Himanthalia elongata Himel1 dioecious)
AAGGTGCACCACGTACTGAAAGACCATCTCTACCGGAAGCTAGCTCTTAG CCTTCGTCGGTTCTCCATCTCTGCACGGCAGTCAGCAGTATCGCTGCCAA CAACCGCGTTACTACGTGTGGTAGGGCTGACGGCATCATACACCTATGCC GTTGGCGAAGCTAAGGTTAAAGCTTCGCTTGGCTCGTTGTGTAGCGAGCT TCTGGTCACGAACCTCTCCACCGCAAGTCGCGAGGAGCTCACTAGTAGTG GGTATCACGCCGTGGGGGCGTCTGCGGAAGTAAAGCTGGTCCCGAGTGAT TTGCTGTCGCCTTCGCGTGTTCCCGAGGGTGTAGTACCCGTGATCAATCG GAAGCCACATTTGATGATAGACACTTTCTTCCGTCGGGAGAGAAATGGAG AGTGTACCGCGTTCTCTCGGCAGTTCATGACCTGCGTCCGCGAGATGGAA AAAGTCGTCTTGTCCTCGGGGGAGCACCCATCCTTCGCCTCGCCGCTTCG TCCGAACATGAAGATAGCCGCCAGAGACTGGGGTGCCTACGCTCACAAAC TTGCGATTAAAAGCAATGGAAAGGTTGTCAGCACTACCGGGCAAGATCAC GAACGCAGAGCTTGCACACAATGCGGAAAGTACGCCTCGGGGAAGCAGGT GGGCCATGTGACGCCCCTGTTGGCCGAGCTGGAGCACTGGTACGAGGCTT TAAAGACACTGGTTGTTTCATGGGAGGAGGCCGAGGACGAAGCTGTGATG ATACTCGAGATGGGTGGTTGCAAGAGACTACAGCGCATGATAGCAAGCTC TGCCGGCGCGCGTCCTACTGATAAGGCGAATGCGACATTGGAGGCGGCCT TAACCGCATTCTGGATGAAGGTACCTGACACGTTTCCGCGTTACGAGCAC TTAAAAAAAGTGCTGAAGGAGAAATACGCGTCCCACGAGGGTGGCGAAAG TTCCGAGAACGAACAGCACACTTTCCGAGGCATAGTTTTTGTTCGCCAGC GCGTGACGACACATGTTCTTGCGCACGTGATTGCGCGAGATCCCGCCATG GCGTCTCTCTTCCGCACAGCTTGCCTGTATGCGTCATCTTCACCCGCGAC GGCATCGCTCTCCGTGTCGAAGGCGCAGTCTCAGGCGTCGATTGAATCCT TCCGCGAAGGCAGCGTCAATCTTCTAATTGCGACGAGCGTGGCGGAGGAA GGGATGGATATCCCCGCGGCAAACTGCGTGATTCGCTTCGACGCGATGGA GCACGCCGTTTCGCTCGTGCAGAGTCGGGGTCGCGCGCGACAAGAAGGAA GCAGCTTCGTGGTCCTCAGCCAGCGCACGGATCGCACCACCGCCGACCTA GAAGCCGTGGAGAGCGAACAGTTGCGCCTTGTGCGGAATTTCAAGCCT
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Coding sequence (CDS) from alignment at H-elongata_contig19921:4604..6001-

>mRNA_H-elongata_contig19921.5598.1 ID=mRNA_H-elongata_contig19921.5598.1|Name=mRNA_H-elongata_contig19921.5598.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2796bp|location=Sequence derived from alignment at H-elongata_contig19921:4604..6001- (Himanthalia elongata Himel1 dioecious)
AAGGTGCACCACGTACTGAAAGACCATCTCTACCGGAAGCTAGCTCTTAG
CCTTCGTCGGTTCTCCATCTCTGCACGGCAGTCAGCAGTATCGCTGCCAA
CAACCGCGTTACTACGTGTGGTAGGGCTGACGGCATCATACACCTATGCC
GTTGGCGAAGCTAAGGTTAAAGCTTCGCTTGGCTCGTTGTGTAGCGAGCT
TCTGGTCACGAACCTCTCCACCGCAAGTCGCGAGGAGCTCACTAGTAGTG
GGTATCACGCCGTGGGGGCGTCTGCGGAAGTAAAGCTGGTCCCGAGTGAT
TTGCTGTCGCCTTCGCGTGTTCCCGAGGGTGTAGTACCCGTGATCAATCG
GAAGCCACATTTGATGATAGACACTTTCTTCCGTCGGGAGAGAAATGGAG
AGTGTACCGCGTTCTCTCGGCAGTTCATGACCTGCGTCCGCGAGATGGAA
AAAGTCGTCTTGTCCTCGGGGGAGCACCCATCCTTCGCCTCGCCGCTTCG
TCCGAACATGAAGATAGCCGCCAGAGACTGGGGTGCCTACGCTCACAAAC
TTGCGATTAAAAGCAATGGAAAGGTTGTCAGCACTACCGGGCAAGATCAC
GAACGCAGAGCTTGCACACAATGCGGAAAGTACGCCTCGGGGAAGCAGGT
GGGCCATGTGACGCCCCTGTTGGCCGAGCTGGAGCACTGGTACGAGGCTT
TAAAGACACTGGTTGTTTCATGGGAGGAGGCCGAGGACGAAGCTGTGATG
ATACTCGAGATGGGTGGTTGCAAGAGACTACAGCGCATGATAGCAAGCTC
TGCCGGCGCGCGTCCTACTGATAAGGCGAATGCGACATTGGAGGCGGCCT
TAACCGCATTCTGGATGAAGGTACCTGACACGTTTCCGCGTTACGAGCAC
TTAAAAAAAGTGCTGAAGGAGAAATACGCGTCCCACGAGGGTGGCGAAAG
TTCCGAGAACGAACAGCACACTTTCCGAGGCATAGTTTTTGTTCGCCAGC
GCGTGACGACACATGTTCTTGCGCACGTGATTGCGCGAGATCCCGCCATG
GCGTCTCTCTTCCGCACAGCTTGCCTGTATGCGTCATCTTCACCCGCGAC
GGCATCGCTCTCCGTGTCGAAGGCGCAGTCTCAGGCGTCGATTGAATCCT
TCCGCGAAGGCAGCGTCAATCTTCTAATTGCGACGAGCGTGGCGGAGGAA
GGGATGGATATCCCCGCGGCAAACTGCGTGATTCGCTTCGACGCGATGGA
GCACGCCGTTTCGCTCGTGCAGAGTCGGGGTCGCGCGCGACAAGAAGGAA
GCAGCTTCGTGGTCCTCAGCCAGCGCACGGATCGCACCACCGCCGACCTA
GAAGCCGTGGAGAGCGAACAGTTGCGCCTTGTGCGGAATTTCAAGCCTAA
GGTGCACCACGTACTGAAAGACCATCTCTACCGGAAGCTAGCTCTTAGCC
TTCGTCGGTTCTCCATCTCTGCACGGCAGTCAGCAGTATCGCTGCCAACA
ACCGCGTTACTACGTGTGGTAGGGCTGACGGCATCATACACCTATGCCGT
TGGCGAAGCTAAGGTTAAAGCTTCGCTTGGCTCGTTGTGTAGCGAGCTTC
TGGTCACGAACCTCTCCACCGCAAGTCGCGAGGAGCTCACTAGTAGTGGG
TATCACGCCGTGGGGGCGTCTGCGGAAGTAAAGCTGGTCCCGAGTGATTT
GCTGTCGCCTTCGCGTGTTCCCGAGGGTGTAGTACCCGTGATCAATCGGA
AGCCACATTTGATGATAGACACTTTCTTCCGTCGGGAGAGAAATGGAGAG
TGTACCGCGTTCTCTCGGCAGTTCATGACCTGCGTCCGCGAGATGGAAAA
AGTCGTCTTGTCCTCGGGGGAGCACCCATCCTTCGCCTCGCCGCTTCGTC
CGAACATGAAGATAGCCGCCAGAGACTGGGGTGCCTACGCTCACAAACTT
GCGATTAAAAGCAATGGAAAGGTTGTCAGCACTACCGGGCAAGATCACGA
ACGCAGAGCTTGCACACAATGCGGAAAGTACGCCTCGGGGAAGCAGGTGG
GCCATGTGACGCCCCTGTTGGCCGAGCTGGAGCACTGGTACGAGGCTTTA
AAGACACTGGTTGTTTCATGGGAGGAGGCCGAGGACGAAGCTGTGATGAT
ACTCGAGATGGGTGGTTGCAAGAGACTACAGCGCATGATAGCAAGCTCTG
CCGGCGCGCGTCCTACTGATAAGGCGAATGCGACATTGGAGGCGGCCTTA
ACCGCATTCTGGATGAAGGTACCTGACACGTTTCCGCGTTACGAGCACTT
AAAAAAAGTGCTGAAGGAGAAATACGCGTCCCACGAGGGTGGCGAAAGTT
CCGAGAACGAACAGCACACTTTCCGAGGCATAGTTTTTGTTCGCCAGCGC
GTGACGACACATGTTCTTGCGCACGTGATTGCGCGAGATCCCGCCATGGC
GTCTCTCTTCCGCACAGCTTGCCTGTATGCGTCATCTTCACCCGCGACGG
CATCGCTCTCCGTGTCGAAGGCGCAGTCTCAGGCGTCGATTGAATCCTTC
CGCGAAGGCAGCGTCAATCTTCTAATTGCGACGAGCGTGGCGGAGGAAGG
GATGGATATCCCCGCGGCAAACTGCGTGATTCGCTTCGACGCGATGGAGC
ACGCCGTTTCGCTCGTGCAGAGTCGGGGTCGCGCGCGACAAGAAGGAAGC
AGCTTCGTGGTCCTCAGCCAGCGCACGGATCGCACCACCGCCGACCTAGA
AGCCGTGGAGAGCGAACAGTTGCGCCTTGTGCGGAATTTCAAGCCT
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