mRNA_H-elongata_contig19886.5578.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19886.5578.1
Unique NamemRNA_H-elongata_contig19886.5578.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: D7FSY6_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY6_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 4.020e-77
Identity = 127/161 (78.88%), Postives = 148/161 (91.93%), Query Frame = 1 
Query:    1 SFEQMMSSLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGRRSVTVRCATPVQAVRIGKDSLGRMMRGSKSASANLREMSILRDISRAKSLLRAVGNITKSTVPSGRIVIKQGDLGDSMYTVVEVRI 483
            SFE+MM+SLE V F+RGDVVFAEG+DVE SP+MY+LGSGKVDLLKRV+DG PP KLASLSSGDIFGESAMI+GG RS TVRCA+ VQAVRIGKDSLGRMM+G+K+ASANLREMSILRDISRAK+LLRAVG+IT+  +P+G  V++QGDLGDSMYTVVE ++
Sbjct:  340 SFEKMMTSLETVEFQRGDVVFAEGEDVEESPYMYILGSGKVDLLKRVHDGAPPVKLASLSSGDIFGESAMIQGGSRSATVRCASEVQAVRIGKDSLGRMMKGTKTASANLREMSILRDISRAKTLLRAVGSITQRRLPAGSAVVQQGDLGDSMYTVVEGKL 500
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.280e-26
Identity = 60/161 (37.27%), Postives = 100/161 (62.11%), Query Frame = 1 
Query:    4 FEQMMSSLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLAS----LSSGDIFGESAMIEGGRRSVTVRCATPVQAVRIGKDSLGRMMRGSKSASANLREMSILRDISRAKSLLRAVGNITKSTVPSGRIVIKQGDLGDSMYTVVE 474
            FE+++S+L  +SF  G  VF EGD  +    MY + SGKV++L   +      K  +    + +GD FGE  ++    RS ++R  TP++ +R+ KDS  RM++ + +AS+NLRE++  R + R K+LLRA+  + +  V  G +V++QG++G SMYT+V+
Sbjct:  413 FERLLSNLTPLSFPAGAYVFREGDPADA---MYFITSGKVEVLVEGHASPGQEKALTRVDVMGAGDFFGEGGLVLNAPRSASIRAVTPIKLIRVEKDSCQRMLKTTGAASSNLREVAFSRQMVRTKALLRALNTVRRLKVRGGEVVVRQGEVGKSMYTIVD 570
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A448YYG3_9STRA (cGMP-dependent protein kinase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYG3_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.190e-10
Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 1 
Query:    4 FEQMMS-SLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGR-RSVTVRCATPVQAVRIGKDSLGRMMRGSKSAS-ANLREMSILRDISRAKSLLRAVGNITKSTVPSGRIVIKQGDLGDSMYTVVEVRI 483
            +E ++S ++EN  F  G  ++ EGD+      MY L SG V+++    DG    +    +SGD FGE A++     RS T+RC TPV A++I ++   + +  S S     L+E   +R  +RAK++LR    +  +  P       +GD GD+M+ + + ++
Sbjct:  555 YENLLSENMENKYFAAGHTIYEEGDEGHA---MYFLESGAVEVIA---DGTRAVR----TSGDFFGEGALLHPRNVRSATLRCLTPVHALKISQEYFEKYIASSSSGLYLTLKEKDKIRKRNRAKTILRMQAGLKTAAKPCKSKFYVEGDHGDTMWILEKGKV 707
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A4R1BQ61_9ACTN (FHA domain-containing protein n=1 Tax=Rubrobacter taiwanensis TaxID=185139 RepID=A0A4R1BQ61_9ACTN)

HSP 1 Score: 66.6 bits (161), Expect = 1.020e-9
Identity = 34/101 (33.66%), Postives = 60/101 (59.41%), Query Frame = 1 
Query:   40 FERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGRRSVTVRCATPVQAVRIGKDSLGRMMRGSKSASANLREMS 342
            +E G+ +F +GD  +     Y++ SG+V++++    G     LA LS G+ FGE+A++   RR+ +VRCATPV  + IG+D    +    +  +++L+E S
Sbjct:  437 YEAGEYIFRQGDPGD---HFYMIASGEVEVIRERSSGAKEV-LARLSQGEYFGETALLTRARRNASVRCATPVDVITIGRDDFATLAGAWQQLASSLKETS 533
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A7S4EH79_9STRA (cGMP-dependent protein kinase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EH79_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.790e-9
Identity = 49/163 (30.06%), Postives = 84/163 (51.53%), Query Frame = 1 
Query:    4 FEQMMS-SLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGR-RSVTVRCATPVQAVRIGKDSLGRMMRGSKSAS-ANLREMSILRDISRAKSLLRAVGNITKSTVPSGRIVIKQGDLGDSMYTVVEVRI 483
            +E ++S ++EN  F  G  ++ EG        MY L SG V+++    DG    +    +SGD FGE A++     RS +VRC TPV A++I ++   + +  S S     L+E   +R  +RAK++LR   ++  +  P        GD GD+M+ + + ++
Sbjct:  614 YENLLSENMENKYFAAGHTIYEEGVQGHA---MYFLESGAVEVIA---DGTRAVR----TSGDFFGEGALLHPRNIRSASVRCLTPVHALKISQEYFDKYIASSGSGLYLTLKEKDKIRKRNRAKTILRMQSSLKTAAKPCQSKFYTDGDRGDTMWILEKGKV 766
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A1F9HWZ2_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium RIFCSPLOWO2_02_44_9 TaxID=1797873 RepID=A0A1F9HWZ2_9DELT)

HSP 1 Score: 63.9 bits (154), Expect = 7.330e-9
Identity = 41/158 (25.95%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   46 RGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGRRSVTVRCATPVQAVRIGKDSLGRMMRGSKSASANLREMSILRDISRAKSLLRA------------VGNITKSTVPSGRIVIKQGDLGDSMYTVVEVRI 483
            +G+ VF EGD  +    +Y++ SG+V+++ R   G     L++L  GD FGE       RR  +VR  +P   + I K  +  ++   +  +  + +    R + R  +L               +  +T S   SG  +++QGD+GD+MY + E ++
Sbjct:  161 QGEFVFKEGDSGDS---IYIINSGEVEIISRDRRG-NDVVLSTLKEGDFFGEFGFFSNARREASVRAKSPASMLEIVKKDIADIIERHRRVAGVIFDFYKERVVDRLMALSSVFEPVTTGDRKIILARLTSSKYESGATIVRQGDIGDTMYLIKEGKV 314
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: UPI00198AA3D7 (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Undibacterium sp. TaxID=1914977 RepID=UPI00198AA3D7)

HSP 1 Score: 62.8 bits (151), Expect = 1.520e-8
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 
Query:   40 FERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGRRSVTVRCATPVQAVRIGK---DSLGRMMRGSKSASANLREMSILRDISRAKS----LLRAVGNITK-STVPSGRIVIKQGDLGDSMYTVVE 474
            FE G  V  EG   E    +YV+ SG+V++L+    G P A +A L  GDIFGE A+IEGG R  +VRCA P   + IGK   DSL       ++    ++++  LR I  ++      L A    ++   +  G IV + GDL    + V E
Sbjct:   82 FEAGAYVVREG---EPGDRLYVVYSGRVEVLREQSVGEPEA-IAELQRGDIFGEMALIEGGIRRRSVRCAAPGVLLSIGKWEFDSLVFSRLSRQAIVDAVQKIGFLRRIPLSRQWSPHALTAFARCSEFRDLKPGEIVFRTGDLNPFFHLVQE 230
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A7BVI5_9GAMM (Reductase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7BVI5_9GAMM)

HSP 1 Score: 63.2 bits (152), Expect = 1.650e-8
Identity = 47/169 (27.81%), Postives = 86/169 (50.89%), Query Frame = 1 
Query:    7 EQMMSSLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGG---RRSVTVRCATPVQAVRIGKDSLGRMMRGSKSASANLREMS---ILRDISRAKSLLR-------AVGNITKSTVPSGRIVIKQGDLGDSMYTVVE 474
            +++ +  + ++ E  +++F EGD   V   MY++ SG V +L    DG P   LASL SGD FGE A++ G    +R ++V    P + ++I    L +++         L+E+S   I  +  +  +L+        A+  + + T   G +V ++GD+GD  Y ++E
Sbjct:   26 QELFAHAKILNVELDEIIFEEGD---VGHSMYLIKSGAVRVLTTNEDGQPMI-LASLQSGDCFGEQAILSGRNEEKRQISVIATEPGEILKIALSDLYKIVPPDSRLEGQLQEISEDKIRHEREKQSALVGEQLLDKGAMEWLDEKTFKDGEVVFQEGDIGDRFYLILE 190
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A661F3N9_9GAMM (Crp/Fnr family transcriptional regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661F3N9_9GAMM)

HSP 1 Score: 62.8 bits (151), Expect = 1.910e-8
Identity = 31/91 (34.07%), Postives = 53/91 (58.24%), Query Frame = 1 
Query:    1 SFEQMMSSLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGRRSVTVRCATPVQAVRI 273
            + +Q++ SLE V+F++G V+F +GD   V  + +++  G   L ++  +         LS G+ FGE A++ G RR++TV   T +QA RI
Sbjct:  161 NLQQVLMSLEEVTFKKGQVIFQQGD---VGDYCFLIKKGSCSLSRKASERAKEISYLELSEGETFGEQAILTGERRNMTVTAVTDMQASRI 248
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BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Match: A0A7C1IQ14_9FIRM (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C1IQ14_9FIRM)

HSP 1 Score: 59.3 bits (142), Expect = 5.860e-8
Identity = 30/83 (36.14%), Postives = 51/83 (61.45%), Query Frame = 1 
Query:    7 EQMMSSLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPAKLASLSSGDIFGESAMIEGGRRSVTVRCATP 255
            E ++S+L   ++++G  VF +GDD +   ++Y+L  G V +   V  G+   K+ASL SG+ FGE +++ G ++S T  C TP
Sbjct:   30 ESLISNLIKKNYKKGQRVFNQGDDAD---YLYILFQGNVGIF--VKSGIGKKKIASLDSGNYFGEMSLVLGDKKSATAVCETP 107
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19886.5578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY6_ECTSI4.020e-7778.88cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
A0A836CF38_9STRA3.280e-2637.27cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A448YYG3_9STRA1.190e-1030.67cGMP-dependent protein kinase n=1 Tax=Pseudo-nitzs... [more]
A0A4R1BQ61_9ACTN1.020e-933.66FHA domain-containing protein n=1 Tax=Rubrobacter ... [more]
A0A7S4EH79_9STRA4.790e-930.06cGMP-dependent protein kinase n=1 Tax=Pseudo-nitzs... [more]
A0A1F9HWZ2_9DELT7.330e-925.95Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
UPI00198AA3D71.520e-835.29Cyclic nucleotide-binding domain-containing protei... [more]
A7BVI5_9GAMM1.650e-827.81Reductase n=1 Tax=Beggiatoa sp. PS TaxID=422289 Re... [more]
A0A661F3N9_9GAMM1.910e-834.07Crp/Fnr family transcriptional regulator n=1 Tax=G... [more]
A0A7C1IQ14_9FIRM5.860e-836.14Cyclic nucleotide-binding domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19886contigH-elongata_contig19886:438..5427 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score76.3
Seed ortholog evalue1.5e-11
Seed eggNOG ortholog2880.D7G5Y1
KEGG koko:K07376,ko:K08813,ko:K13412
KEGG Pathwayko04022,ko04270,ko04540,ko04611,ko04626,ko04713,ko04714,ko04730,ko04740,ko04923,ko04970,ko05145,map04022,map04270,map04540,map04611,map04626,map04713,map04714,map04730,map04740,map04923,map04970,map05145
KEGG ModuleM00694
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009931,GO:0009987,GO:0010857,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.cGMP-dependent protein kinase activity
EggNOG OGsCOG0664@1,KOG0032@1,KOG0032@2759,KOG0614@2759
EC2.7.11.1,2.7.11.12
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons4
Model size504
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19886.5578.1prot_H-elongata_contig19886.5578.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19886 450..5427 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930122.6986444-UTR-H-elongata_contig19886:437..4491622930122.6986444-UTR-H-elongata_contig19886:437..449Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19886 438..449 +
1691679289.591543-UTR-H-elongata_contig19886:437..4491691679289.591543-UTR-H-elongata_contig19886:437..449Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig19886 438..449 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930122.7120373-CDS-H-elongata_contig19886:449..5571622930122.7120373-CDS-H-elongata_contig19886:449..557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 450..557 +
1691679289.6035635-CDS-H-elongata_contig19886:449..5571691679289.6035635-CDS-H-elongata_contig19886:449..557Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 450..557 +
1622930122.727168-CDS-H-elongata_contig19886:3145..32861622930122.727168-CDS-H-elongata_contig19886:3145..3286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 3146..3286 +
1691679289.6108968-CDS-H-elongata_contig19886:3145..32861691679289.6108968-CDS-H-elongata_contig19886:3145..3286Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 3146..3286 +
1622930122.7432075-CDS-H-elongata_contig19886:3766..38411622930122.7432075-CDS-H-elongata_contig19886:3766..3841Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 3767..3841 +
1691679289.6182764-CDS-H-elongata_contig19886:3766..38411691679289.6182764-CDS-H-elongata_contig19886:3766..3841Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 3767..3841 +
1622930122.7614758-CDS-H-elongata_contig19886:5259..54271622930122.7614758-CDS-H-elongata_contig19886:5259..5427Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 5260..5427 +
1691679289.6254733-CDS-H-elongata_contig19886:5259..54271691679289.6254733-CDS-H-elongata_contig19886:5259..5427Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19886 5260..5427 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19886.5578.1

>prot_H-elongata_contig19886.5578.1 ID=prot_H-elongata_contig19886.5578.1|Name=mRNA_H-elongata_contig19886.5578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MMSSLENVSFERGDVVFAEGDDVEVSPFMYVLGSGKVDLLKRVYDGVPPA
KLASLSSGDIFGESAMIEGGRRSVTVRCATPVQAVRIGKDSLGRMMRGSK
SASANLREMSILRDISRAKSLLRAVGNITKSTVPSGRIVIKQGDLGDSMY
TVVEVRIYSELVR*
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mRNA from alignment at H-elongata_contig19886:438..5427+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19886.5578.1 ID=mRNA_H-elongata_contig19886.5578.1|Name=mRNA_H-elongata_contig19886.5578.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4990bp|location=Sequence derived from alignment at H-elongata_contig19886:438..5427+ (Himanthalia elongata Himel1 dioecious)
AGCTTTGAGCAGATGATGTCGTCCTTGGAGAATGTCTCGTTCGAGCGGGG
CGACGTGGTATTCGCCGAAGGGGACGATGTTGAAGTGTCCCCGTTTATGT
ACGTCCTGGGCAGCGGCAAGGTGTGCATCGCAACGCAACGTAGTGCAGTG
GAGTGTAGTACAGGTACACGAAGGGTTACAGTGAGCCTATATTTTTTATT
GCCTAGCGGCCAAAAGTAAAGGTTAGATCCAACCGTTTAACGCCAAACGG
GCAGAATTATACCGAGAAGAATCCAACTGTCTAAGCATCCAACGGTGGCT
AAAAACTTAAGATGGATCCATTTCCTAAACACTAAACGGTTGGATGAAAT
GCACCGGGGAATAGTTCCTTGGATATACTGTATACCCATTTTTAAAACGC
CAAAAGGTTGAATTCGAAGAATCTCAGAATAGATCCTAGCATGGATATAT
ATAATATATATCATAAACAATAGCCCGAAATCAAGGAAAATAGGCAGCCA
GCCATTCATGGCCCAAACGGCCGGAATCCTATGATGCACCGAACGAGCGG
AAAACAACCTCCGATGGATCCAGATATTCTTTACGCGAAACCTCCTTGAA
TGTTTGGTGATGCGTCTTAATCGTCAGGTGCTACCACCTTTGGCATCATA
GCGCCAGTCTTCTCCTTGTTTCTTGTTTGGTTTCGAGGTTTACTGGCGTT
GTCGGGCGTAGTAGAGTGTAAACCAAAACGCTATTACTAGTCGGCGGCTA
ACAAATGCATGCCCTGGCTAGGTCCTAAGAGTCTGATAGTAGAAGAGAGG
TTTCCTACGCCGGGGGATTACATTTCGGACCCTTACAGCACTGTACTATA
ACTATAAGTGATAGGGCGGTAGGTGCAAATCACACGGAACACTTTTTCGG
TCTATTTTTCACGATCTCGTCGAGGTCTTTTTCTATAAATGTCCACACCG
TGGCGTGTCTGTGCTGTATCCCACTTGATCACTGCGGCAAACATGGACCG
TGTAACAGCGTTGGGCGAGTGGTGCACCTTTGTAGGTCAGGGTAAAGTAT
TTATAATCCAATACACAGCCCTGATGTGAAACAATAATCGCGTTCGTCAT
ACACTGTGTACCATTCTTCGAGATGGGAAGACCCCTAGGAGATGGAGACA
GTGGGACTCGAACCCACCATTTGCTTTAGTAAAGGGTAGAAAATTGACTC
CCACTCCATGTAGTCAACGGTTACTTTTGCTGGGTAGCTAGCTGACTTGG
CCTAGACCCCAGTGGTAACTTTTAAGTCTGCCCCGCCAGCGAAAATGAAT
AGATTTCCCTAGAGTTTCAACCTGCTCTAGCAGGCTAGGGCAGCATTAGG
TTGATGCAGCCGCCTCAACCAGATTTTTGAATACCACTGTTGTAGTATCT
TATGCAATTTCCATGGAAATGTAGCACTTACAAGCTTTTTGGGTTGCTGC
TAAGAGGCCGACTTTTACCACTTTATTCTTTGTCGAAACCATCTCTAAAT
ATATTTGTATAAGCTGATCCCCCCGTTTGACCAGACATGACGATGACTCC
ACCTAACCCCGAAGAAAGCCTGGCGTCAATTTCCGACATGGGGACGTTTA
CATATTACTAGGGATGCAAGCTGTGCGGTTGTATTAGTTATCGACAAAGC
TTTTTATCTTAACGTTTGAGATATTTCAAACACTCGGAACATCCACACCT
TTATACCAATTTGAGTGAAACTCTGAGGAACCTCCCGTCGTTGGATTCGA
CTAGGCACTTCATTGGCTTGTCAGCATAAAAACGCCATATGGTATTTAAC
GTGGTTCCCGGTGATATTAGCATTGGATCAAAATAGATTGCCACCACCCT
ACCCAGAGGCCGAAATAGAGTATTTGAAATGGTATTAGAGCTAGAGGACT
CATCAGTAATGTGTCCTTTCTCCCAACTTGATGATTTCTATTGATGACAA
TATCCTATCTGTTTCGTCACACGTTGCTGCTGAGGTGAAATCTTGACTTC
TGGAATAAACGTCCCAACGCCTTTAAGCTCCCCACAACAGGGCTATCGTA
GAGGGCAACCATGGTGGCAAGAACGACTACGGAGAACCAGGAAATTAACT
GCTGCCTTTGTGTCAAAAACCTGTGCCCAGTCCCTCCGCCAAAGCAAAAT
AACGACCTACTTAGCCCCCTCCTCCCCCTCCTTATTACTTTTGCACGAGG
ATCGTGAGTTGTGTACTGCAAACACTATATTTGGACATAAACTCGCTTCG
CCCTTCACCCCCACTTCGGCAAAGTAGAAAGGAGCGATTGGCCAACGGCG
ATCGATCATGTAGGAACAATACTCCATTCTCCCGAAGACCCATGATCAAT
GGTTCAACAGCGAAGACATTTAAAACTTGAGGACACTTCCGCCCCCCCCC
TCCCTAAAAAAAACTGATTTAACTCAAACCCTCCGAATATCCACACGTTG
TTTACCCCTGCTTCGGTGAAATTCCGGGAAAACGTACTGTCCGGTTCATA
AAACACCACATGTGATTTATATCGGGGAGTTACACACTCTTATACGAGAA
AACCGAAGTCTTTCAGTTTAGATCGCTTGACTGTTTGTTGAAGTGGAGGC
GGTTGGTAGGTAGAACTGGGACCAGTTTCCAGCGTCCTATTATACAAAAC
CGACCGCTGAACTACTTTGCTGATGGTGGTATTCACCAAATACCACACGA
TGGAACAGGTTGATCTGTTAAAGCGAGTGTACGATGGTGTTCCCCCCGCC
AAGCTGGCATCGCTGTCAAGCGGGGATATCTTCGGCGAATCGGCCATGAT
CGAAGGCGGCAGAAGATCAGTCACGGTTCGGTGCGCGACTCCTGTCCAGG
TGAGATGTGGACGCATGTTGTACGTGCGTGGAAACCCGTTTTCATTTTTT
TTAGTTTACTCTTGTGGGCCGTCGGCCGTGGAAGCGGTGGTCGCTCTCTT
CTCCGCGTGTTGTAGAAACTGTTCTGTGACCTGCATCGCGATGAAAGAGC
GTGGATAAGTGTAAGCCGGTGAGAGGTAGAGTAGACCCTCCAGGATCAAC
GCTGGGTTCCGTAAGTTTAATACTGAAATCCCCCGGAGCACGCGGATTTG
GTAGCCTGGCCCATGGGGAGAAAATGAGAAAATGCCTCCCAGAGAAAAAT
AAAATAAGATAACAAAAACAACACAAAAATGGGCACGACGATGAAAACAG
GGATTTACCGATGTTTGTTGCAGCCGTCAGGCCGCAGATTAACTACACTC
TGTCGTAGGTTATGGGCTGATAATATTTTGGCTGTGTTTTTCTCTGGTGT
GGTCCGTCCCTGGTGTTGGGCAAACACAGGCCGTGCGGATCGGTAAGGAC
AGTCTTGGGCGCATGATGAGGGGCTCTAAGTCGGCGTCAGCCAACCTTCG
AGAGGTACAGTGATATGGTGTACGTACGCGTAAACGTTCATGCCACAATC
ACCGCCAAAATAGATACTGGAATACTGTGCGAGGCAGCTGGTCGTATAAC
GATATAACCAAAAGTTTTGTCTCGATGGCCATACATATGTGATGGGATCA
CACATTTCAAGGGTGGACGAATACAGCATGAAGTTTGTAGCGTACCCACC
AAGAGAAGATATAGGTGGAGGAGGCTGTGAGCAAAGGTGTTTCCGCCGGG
GTATACTGTAGAACCTTCGAAGCGATGCTGCTTGGATAAAGTAGATTATT
ATAGACTGTCCGAAGGAACCCGGTACAGGCACAAGACGGACATGGCCGGG
ACCGTGTAGTGCCTAGGCATGTGAATGCGTAACGTAGCGTCTCCCCTTGT
TGTGTGAGCTTTGTTTTTGTCTGCTCCTCCATGTCAGCATATCTCCTTTA
GACTAGAGATAGAGACATCTCGGGTTTTGTCTAGCTTGTCGACCGAATAG
TCTACATTTGGACATAAACCATGGCCATGAAAAGAAGTGGTGGACATACC
GCTGAGATGACTTTAAGATCTTCAAGATCGAGGAGATTATTTCGCGAGGG
CTTGCGATGTTGCTGAGCGGCTGACTACTACCATGAAAGAGAAAACGAAG
AATATGGATGAGTTGGGGGAAGACAATGCGATCCACCAAAGGCATCCTGC
GTGCAGAGGAACGCGTGACGTTAACGACCATAGTTGTTCCGGGGATCAAA
ATCGTGGACTGGGCACGATTCAGTGAGACGTTTGCTGGGGATAGTTTTGG
GGTACAACTGCCTCTTCCCAAGAAATGTCGCAGTGAGAAATACCCCGGGG
GTAGATATGTGTGTATTCCACTCTCGAGGTCAACCCAGGGACCTTGTTCA
AGGATTTTCTCGAAGATGAGCGAACATGCCATTGCTCCGTTCTCCTCAAG
AGGGTGGTAGTCCGTCCTCCGGTAAAAACACCCCCAACATGTCCAGTAGG
TGCAGTGTCTGTGGAACACAGGGACGAAGCGAGGAAGATGGGGTAGGAGC
TGGCGGTGGAAATGGACGGATTCGTGTAGCACTTTCTAACTGTTCAGTAC
TGCCGTCGAATCCTCCAATTTACGCGTTTATGTTCCTGGATAAGTGGGAC
GAAGGTGGATAGGGAGTCGAACACCTTTTTTTCGTTTGTGTATTCTCTGT
GCCGTAGCCACGTTAGCGCATGTTTTTTGTCTCTTCATTTTTGTCTTTTG
AGTAAATTAGTGTACATAGTTTCCTAATGTTTTTTTTCTACCTTTGTTTT
GGGACTAACCACGAGCGGGACTGGGTCAGGGCCAGATACTAAATATGCGA
ATTGAACTCATTTTAATTAACCTTTTTACATACAATGCTGCTATTGCTCA
TTTGAATATTGCGACGTGGCAGATGTCCATCCTTCGAGACATCAGTCGTG
CCAAATCTCTCCTGAGGGCCGTAGGGAATATCACCAAGTCCACGGTACCT
TCAGGGCGAATCGTAATAAAGCAGGGTGATCTGGGCGACTCTATGTATAC
TGTAGTGGAGGTAAGGATATACTCGGAGCTAGTAAGGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig19886:438..5427+

>mRNA_H-elongata_contig19886.5578.1 ID=mRNA_H-elongata_contig19886.5578.1|Name=mRNA_H-elongata_contig19886.5578.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=984bp|location=Sequence derived from alignment at H-elongata_contig19886:438..5427+ (Himanthalia elongata Himel1 dioecious)
ATGATGTCGTCCTTGGAGAATGTCTCGTTCGAGCGGGGCGACGTGGTATT
CGCCGAAGGGGACGATGTTGAAGTGTCCCCGTTTATGTACGTCCTGGGCA
GCGGCAAGATGATGTCGTCCTTGGAGAATGTCTCGTTCGAGCGGGGCGAC
GTGGTATTCGCCGAAGGGGACGATGTTGAAGTGTCCCCGTTTATGTACGT
CCTGGGCAGCGGCAAGGTTGATCTGTTAAAGCGAGTGTACGATGGTGTTC
CCCCCGCCAAGCTGGCATCGCTGTCAAGCGGGGATATCTTCGGCGAATCG
GCCATGATCGAAGGCGGCAGAAGATCAGTCACGGTTCGGTGCGCGACTCC
TGTCCAGGTTGATCTGTTAAAGCGAGTGTACGATGGTGTTCCCCCCGCCA
AGCTGGCATCGCTGTCAAGCGGGGATATCTTCGGCGAATCGGCCATGATC
GAAGGCGGCAGAAGATCAGTCACGGTTCGGTGCGCGACTCCTGTCCAGGC
CGTGCGGATCGGTAAGGACAGTCTTGGGCGCATGATGAGGGGCTCTAAGT
CGGCGTCAGCCAACCTTCGAGAGGCCGTGCGGATCGGTAAGGACAGTCTT
GGGCGCATGATGAGGGGCTCTAAGTCGGCGTCAGCCAACCTTCGAGAGAT
GTCCATCCTTCGAGACATCAGTCGTGCCAAATCTCTCCTGAGGGCCGTAG
GGAATATCACCAAGTCCACGGTACCTTCAGGGCGAATCGTAATAAAGCAG
GGTGATCTGGGCGACTCTATGTATACTGTAGTGGAGGTAAGGATATACTC
GGAGCTAGTAAGGTAGATGTCCATCCTTCGAGACATCAGTCGTGCCAAAT
CTCTCCTGAGGGCCGTAGGGAATATCACCAAGTCCACGGTACCTTCAGGG
CGAATCGTAATAAAGCAGGGTGATCTGGGCGACTCTATGTATACTGTAGT
GGAGGTAAGGATATACTCGGAGCTAGTAAGGTAG
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