mRNA_H-elongata_contig19884.5576.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: A0A6H5KSE9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSE9_9PHAE) HSP 1 Score: 227 bits (578), Expect = 9.560e-59 Identity = 164/446 (36.77%), Postives = 219/446 (49.10%), Query Frame = 2
Query: 881 QGEMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYAGK---GNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQN-RDRLRKTSNTQFIRLCRGGARGLQFLHEKGIVHGDVKPNNFLVSEDRFVCKVADFGSAGPRNTA-AGMSTLPYAAPESVGVFKEMKVDLQDPMDVWSMALVILQVIFRQPLAPTEHDVLAEHEDFLLPPDDQTPVKIAQSNYDLLCDRAD------GTGRRADLKAQGLALCELRTLRGLYSGMSARLKDLDEYLLSTLVWEDMSSLAYEAEVKKVLASMLDSDPRRRVCMATVVDALSQATLWEIEGDSLLRRVD-----------------------GATSSGVSDL------LRSI--------------GREIAGNRTDEPSWLAVAKATGND-WWKRVCPCP 2053
+G LGEGG G V+ L + + L+ A GRGL +K K G REIR+L S MP H NI NVFAT+ +IVME M DL+ LL + R+ L + S Q +RL G A GL F+HE G HGDVKP N LVS D CK++DFGS G A G TLP+ PE++GV K KV L+ MDVWS +V+LQ R PT+H+VL +H +LP + Q+ IAQ++ ++ A+ G +R +KA ++ LR +Y G A+ K LD+++LS VW D + EV+KVL +ML DPR R+ M V L LW L G TS + L L S+ G+ + G+R + PSWL V A + WW+ V P P
Sbjct: 929 KGVKLGEGGGGEVFDLKIADEQLQGQFAAAGVGRGLVLKTLKKPKKGKRDTGIREIRMLASFMPTCHPNITNVFATNIATRSIVMEKMHMDLEHLLNHPREGLDRVSQDQMVRLIYGAALGLNFMHEMGFAHGDVKPANMLVSNDLRECKISDFGSVGRLGVADVGDVTLPFTPPEAMGVAKGWKVPLKASMDVWSFGMVVLQATSRVRRLPTDHEVLGDHIHSILPTERQS--WIAQAHEAMMVANANFYYIACGRSKRTQIKASS----DIIRLREVYFGTYAKTKTLDDFILSRRVWPDQRVFRHLPEVRKVLGAMLAVDPRERINMKLVALFLRHPGLWSRTTTGLRAAASADAPGLPGAPTAATPSPSPGDGSGKTSLDLKPLPETAHTLLSVLDEAANHDMVFTADGQVVPGDRAEVPSWLEVEMARKDGAWWQNV-PIP 1367
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: D7FZ99_ECTSI (Kinase, CAMK CAMKL n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ99_ECTSI) HSP 1 Score: 141 bits (355), Expect = 5.360e-31 Identity = 110/356 (30.90%), Postives = 174/356 (48.88%), Query Frame = 2
Query: 839 GILSSLDGVGGPIVQ-GEMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYA----GKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQNRDRLRKTSNTQFIRLCRGGARGLQFLH-EKGIVHGDVKPNNFLVSEDRFVCKVADFGSAGPRNTAAGMSTLPYAAPESVGVFKEMKVD----LQDPMDVWSMALVILQVIFRQPLAPTEHDVLAEHEDFLLPPDDQTPVKIAQSNYDLLCDRADGTGRRADLKAQGLALCELRTLRGLYSGMSARLKDLDEYLLSTLVWEDMSSLAYEAEVKKVLASMLDSDPRRRVCMATVVDALSQATLW 1876
G ++ L GG + G LG+GG V RL + +A + T GL +K G+ ++REIRV+ + P H N+I++ +TS +VM A F D+Q LL+++ L S + + G ARGL +LH E G+ HGDVKP N L+++ V K+ADFG +G + YAAPE+V VF ++ LQ +D +S+ +++LQV+F + + LA H P + V+ N L + + TG D + A + L Y+ A++ DL +L+ W L ++ EV + S+L+++P RR + TV L+ LW
Sbjct: 404 GFITELASAGGRMSTFGRRLGQGGCAVVTRLEMLDAEHQTRVDEYTGDAGLVVKIVPMDGGRAMEMAMEREIRVVKMIPPRCHVNVIDIMSTSMENLCMVMPAAFCDVQHLLEDKAVLEMMSFADRMMMMAGAARGLDYLHSELGLTHGDVKPENCLLTKG-LVIKLADFGLSGSSGEPICGLSKQYAAPEAVAVFLRREIPQRAMLQPSLDTFSLGVMMLQVLFVEEGSRFSGKALATHGFTPKHPSFHSAVQ----NAAYLKQKFEATGTGIDKERFEDASTVVLDLHVNYAAQPAKMGDLRRTILNPSKWNQSGELLFQEEVTQAFLSLLNANPLRRPSLDTVSRLLACPLLW 754
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: D7G6N6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N6_ECTSI) HSP 1 Score: 124 bits (310), Expect = 4.890e-26 Identity = 100/327 (30.58%), Postives = 157/327 (48.01%), Query Frame = 2
Query: 830 RGLGILSSLDGVGGPIVQ-GEMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYA----GKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQNRDRLRKTSNTQFIRLCRGGARGLQFLH-EKGIVHGDVKPNNFLVSEDRFVCKVADFGSAGPRNTAAGMSTLPYAAPESVGVFKEMKVD----LQDPMDVWSMALVILQVIFRQPLAPTEHDVLAEHEDFLLPPDDQTPVKIAQSNYDLLCDRADGTGRRADLKAQGLALCELRTLRGLYSGMSARLKDLDEYLLSTLVWEDMSSLAYEAE 1780
R G ++ L GG + G LG+GG V RL + +A + T GL +K G+ ++REIRV+ + P H N+I++ +TS +VM A F D+Q LL+++ L S + + G ARGL +LH E G+ HGDVKP N L+++ V K+ADFG +G + YAAPE+V VF ++ LQ +D +S+ +++LQV+F + + LA H P + V+ N L + + TG D + A + L Y+ A++ DL +L+ W L ++ E
Sbjct: 203 RRFGFITELASAGGRMSTFGRRLGQGGCAVVTRLEMLDAEHQTRVDEYTGDAGLVVKIVPMDGGRAMEMAMEREIRVVKMIPPRCHVNVIDIMSTSMENLCMVMPAAFCDVQHLLEDKAVLEMMSFADRMMMMAGAARGLDYLHSELGLTHGDVKPENCLLTKG-LVIKLADFGLSGSSGEPICGLSKQYAAPEAVAVFLRREIPQRAMLQPSLDTFSLGVMMLQVLFVEEGSRFSGKALATHGFTPKHPSFHSAVQ----NAAYLKQKFEATGTGIDKERFEDASTVVLDLHVNYAAQPAKMGDLRRTILNPSKWNQSGELLFQEE 524
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: D7FHW0_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW0_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 3.420e-16 Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = 2
Query: 839 GILSSLDGVGGPIVQ-GEMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYA----GKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQNRDRLRKTSNTQFIRLCRGGARGLQFLH-EKGIVHGDVKPNNFLVSEDRFVCKVADFGSAG 1342
G ++ L GG + G LG+GG V RL + A ++ T GL +K G+ ++REIRV+ + P H N+I++ +TS +VM A F D+Q LL+++ L S + + G ARGL +LH E G+ HGDVKP N L+++ V K+ADFG +G
Sbjct: 206 GFITELASAGGRMSTFGRRLGQGGCAVVARLEMLNAEHQSRVDEYTGDAGLVVKIVPMDGGRAMEMAMEREIRVVKMIPPRCHVNVIDIMSTSMENLCMVMPAAFCDVQHLLEDKAVLEMMSFADRMMMMAGAARGLDYLHSELGLTHGDVKPENCLLTKG-LVIKLADFGLSG 378
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: A0A218WUQ1_PUNGR (Protein kinase domain-containing protein n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218WUQ1_PUNGR) HSP 1 Score: 78.6 bits (192), Expect = 9.500e-12 Identity = 66/208 (31.73%), Postives = 110/208 (52.88%), Query Frame = 2
Query: 890 MLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYAGKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCV--KNTIVMEAMF-ADLQSLLQNRDRLRKTSNTQFIRLCRGGARGLQFLHEKG--IVHGDVKPNNFLVSEDRFVCKVADFGSA--GPRNTAAGMSTLP-----YAAPESVGVFKEMKVDLQDPMDVWSMALVILQV 1477
++GEGGFG VY+ + ++ AT +G +A+K + A+ K + L L F+H NI+ + C + +V E M L+ LL + ++ S ++ IR+ G ARGL++LHE ++H D+K +N L+ D F K++DFG A GP++ + +ST Y APE +G + LQ D +S +V+L++
Sbjct: 112 LVGEGGFGDVYKGWINPCTMTATKE--NNGSIVAVKRLRRTGAQGHKEWLNELRFLSEFNHPNIVKLIGYCCEDQQRILVYEYMLRGSLEELLFGENN-QELSWSRRIRIALGAARGLEYLHEHAEPVIHRDIKASNILLDGD-FTAKLSDFGLARLGPQDDRSYVSTRVLGTKGYFAPEYIGTGH---LTLQT--DTYSFGIVLLEI 310
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: A0A1X0P3F4_9TRYP (Mitogen activated kinase-like protein n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P3F4_9TRYP) HSP 1 Score: 79.7 bits (195), Expect = 1.380e-11 Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 2
Query: 872 PIVQGEMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYAGK--GNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQNRDRLRKTSNTQFIRLCRGGARGLQFLHEKGIVHGDVKPNNFLVSEDRFVCKVADFGSAGPRNTAAGM-STLPYAAPESVGVFKEMKVDLQDPMDVWSMALVILQVI 1480
P ++G LG G F VY T ++L MA+ I+ +GK K L EI +L L +H NII+ F +NTI + AD ++ R K R+ + + + +LHE GI+H D+KP N L+S+ V K++DFG+A N GM T+ Y APE + K D+WS+ V+ + +
Sbjct: 710 PWIKGRKLGRGAFADVYEAT---STLTGGKMAVK-----MIRLSGKFEDKVKDLMNEIEILCKL---THPNIIHYFYCERTENTINLFMELADQGTVADLLQRYPKLPENYLARMTKELLQAVNYLHECGIIHRDIKPGNMLISKG--VLKLSDFGTA-TANVGEGMHGTIFYMAPEVIEGRSSSK-----ECDIWSIGCVVCECL 896
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: D3AY38_POLPP (Putative transmembrane protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AY38_POLPP) HSP 1 Score: 79.3 bits (194), Expect = 1.930e-11 Identity = 62/217 (28.57%), Postives = 105/217 (48.39%), Query Frame = 2
Query: 884 GEMLGEGGFGSVYRLTVR--EASLKATAMAITHGRGLAIKYAGKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSL---LQNRDRLRKTSNTQFIRLCRGGARGLQFLHEKGIVHGDVKPNNFLV---SEDRFVC-KVADFG------SAGPRNTAAGMSTLPYAAPESVGVFKEMKVDLQDPMDVWSMALVILQVIFRQ 1489
G+ +G GG+GSV+R R E ++K + K+ K ++RE ++ L H N++N F T+ + + + L S+ + N + R+ + + IR+C A+G FLH+ GI+H D+KP+N LV S D VC K+ DFG S N +G+ T Y APE + +K DV+S +++ +++ +
Sbjct: 849 GDPIGSGGYGSVFRSKWRGLEVAVKV----------IRTKHCSADVVKEVERECDLMNRLR---HPNVVNYFGTALHDGDHYLVSEYVPLGSVANVIYNSEPPRRLAMNEIIRVCLDTAKGCNFLHQSGIMHRDLKPDNLLVVSLSLDSPVCIKLTDFGTSKEVNSMASENATSGIGTPVYMAPEIL-----LKKPYGTQADVYSFGIMLYELVIGE 1047
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: B0EC32_ENTDS (Protein serine/threonine kinase, putative n=1 Tax=Entamoeba dispar (strain ATCC PRA-260 / SAW760) TaxID=370354 RepID=B0EC32_ENTDS) HSP 1 Score: 79.3 bits (194), Expect = 2.180e-11 Identity = 65/228 (28.51%), Postives = 107/228 (46.93%), Query Frame = 2
Query: 875 IVQGEMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYAGKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQNRDRLRKTSNTQF-----IRLCRGGARGLQFLHEKGIVHGDVKPNNFLV----SEDRFVCKVADFGSAGPRNT-------AAGMSTLPYAAPESVGVFKEMKVDLQDPMDVWSMALVILQVI-FRQPLAPTE 1507
I + + +GEG FG VY + +AI +K+ G K ++E+ +L F II+ + + N I M +A S+ +D + K +NT+ I+ GA+G+++LH GI+H D+KP+NFLV + CK+ DFGS+ N G+ T Y APE + + + D++S A+ +LQ+I ++ P TE
Sbjct: 1433 IKEEKKIGEGSFGIVYI-----GEFRGNQVAIKK-----MKHLGDSKMKEFEKEVMMLDK---FRSEYIIHFYGAVFIPNKICMITEYAKYGSI---QDLINKRTNTEIPNKIRIKFMIDGAKGIEYLHSNGIIHRDIKPDNFLVVSIDENQQINCKLTDFGSSRNINMMMTNMTFTKGIGTPKYMAPEVLN-----REHYKMESDIYSYAITMLQIITWKDPFPKTE 1639
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: A0A5E4EQW6_PRUDU (PREDICTED: receptor kinase n=4 Tax=Prunus TaxID=3754 RepID=A0A5E4EQW6_PRUDU) HSP 1 Score: 78.2 bits (191), Expect = 3.670e-11 Identity = 69/217 (31.80%), Postives = 110/217 (50.69%), Query Frame = 2
Query: 887 EMLGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKYAGKGNAKHLKR---EIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSL---LQNRDRLRKTSNTQFIRLCRGGARGLQFLHEK---GIVHGDVKPNNFLVSEDRFVCKVADFG-----SAGPRNTAAGMS-TLPYAAPESVGVFKEMKVDLQDPMDVWSMALVILQVIFRQP 1492
++LGEGGFG+VYR T+ + GR +A+K A KG+ + L+ EI++L + H +++++ K+ +++ F + +L L D L + Q + +C G ARGL +LH GI+H DVK NN L+ E V KVADFG S + + TL Y P+ + M L + DV+S +V+L+V+ +P
Sbjct: 469 KLLGEGGFGNVYRGTLLD------------GRKVAVKRAKKGSGQGLQEFHTEIKILSKI---HHRHLVSLIGYCDQKSEMIIVYEFMENGTLTDHLYGSD-LPRLPWKQRLEICLGAARGLDYLHTVAAGGIIHRDVKSNNILLDEYN-VAKVADFGLSKHGSVDETHVVTKVKGTLGYLDPDYM-----MSEQLSEKSDVYSFGVVLLEVLCGRP 663
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Match: UPI0011D1D2A8 (inactive protein kinase SELMODRAFT_444075-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D1D2A8) HSP 1 Score: 77.4 bits (189), Expect = 6.110e-11 Identity = 67/208 (32.21%), Postives = 99/208 (47.60%), Query Frame = 2
Query: 893 LGEGGFGSVYRLTVREASLKATAMAITHGRGLAIKY---AGKGNAKHLKREIRVLGSLMPFSHNNIINVFATSCVKNTIVMEAMFADLQSLLQNRDRLRKTSNT--QFIRLCRGGARGLQFLHEKGIVHGDVKPNNFLVSEDRFVCKVADFGSAGPRNTAAGMS-------TLPYAAPESVGVFKEMKVDLQDPMDVWSMALVILQVI 1480
L EGGFGSVYR + +G +A+K A K K E+ VL + H N++ + + N ++ + SL Q+ + + T + +R+ G A+GLQ+LHEK IVH D++PNN LV+ D F + DFG A R+ + S TL Y APE K + DV+S +V+LQ+I
Sbjct: 384 LSEGGFGSVYR-------------GVLNGLKIAVKQHKSASFQGEKEFKSEVNVLSTAR---HENLVMLLGSCSEGNRRLLVYEYVCNGSLDQHLSKHSRRPLTWEKRMRIAMGAAKGLQYLHEKNIVHRDMRPNNILVTHD-FESLLGDFGLAKTRHEDSDYSSETRLVGTLGYLAPEYAEYGK-----VSTKTDVYSFGVVLLQLI 569 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19884.5576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19884.5576.1 >prot_H-elongata_contig19884.5576.1 ID=prot_H-elongata_contig19884.5576.1|Name=mRNA_H-elongata_contig19884.5576.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=614bp MRASANEEGCYVLCSLASAPCHTRPFTWASWFRACEEGMSDIFFSGLHAFback to top mRNA from alignment at H-elongata_contig19884:755..6998+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19884.5576.1 ID=mRNA_H-elongata_contig19884.5576.1|Name=mRNA_H-elongata_contig19884.5576.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6244bp|location=Sequence derived from alignment at H-elongata_contig19884:755..6998+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19884:755..6998+ >mRNA_H-elongata_contig19884.5576.1 ID=mRNA_H-elongata_contig19884.5576.1|Name=mRNA_H-elongata_contig19884.5576.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3684bp|location=Sequence derived from alignment at H-elongata_contig19884:755..6998+ (Himanthalia elongata Himel1 dioecious)back to top |