mRNA_H-elongata_contig1988.5575.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A6H5L2P2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P2_9PHAE) HSP 1 Score: 495 bits (1275), Expect = 7.120e-155 Identity = 279/527 (52.94%), Postives = 374/527 (70.97%), Query Frame = 1
Query: 616 DISSISKHIRSDKLMNAARATISLLKVVDGMMKTLVERGEWDIVIKASSLRTEFAMDQMLHDTRRMTFRNKARPTEGE-GRLLVSYELLKAKQEEITVIAKQESMAKQXSFTVKDTTASSSSTASFQDVLKSAIPLSMIQRLTNRITQPVAIEDPNSPKELLELMPQAFLLEHLSDRHKINLPDLCEVVLDEGTRPYAQFRGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGA-IYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGNKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTRIVDDKQ-QDPGSD--DVAFLLQHRTQANKRQQFY 2181
+ S++ + I + L AA+ ISL KV + + +L + G+ DIV++AS TEFAM DTRR+ FRN G GR+L S++L +A++ +++++ S+++ A F D P S + +++ + VA +DPNSP E+L+ +P+ FL E+L++ H NL DL E+VLDEG RPYA +GRG++FL +D+SVVVT++ ID VVG+++ + +F GDNRAG PG+LHRISVMR +E I+GVTLR+GR+F GSA +VDD F+V SP+ PE + S+L+LG+ GSGKTTV+RDICRKIS +T+VIVDTSNEIAG PH AIG SRR+MV +K+ QH VM EALQNHTP+TIVVDE+S+ EARAC DIKARGVR+VASAHGDL+SL++NP LNTLVGGTTSVTLGD+MA N GNK+Q QRAG P+FDTI++LER +VN W++VRNV AVDA+LSG Y++E+RTRI D Q G+D D AFLL+H K +Q+Y
Sbjct: 377 EASTMRRPIDATTLGLAAQPVISLAKVTESAILSLSKEGQKDIVLEASQRMTEFAMSSGRQDTRRVAFRNHGSCCGGGVGRILTSFDLKQARERGGLSAPSRQALS------------SNATPAIFDDTN----PTSALD--SSKQSDGVA-QDPNSPHEILKRIPEEFLEEYLTESHLQNLQDLNELVLDEGRRPYATLQGRGKLFLCSDKSVVVTKEHIDMVVGRLDLEDKFAGDNRAGVPGQLHRISVMRSREARRIFGVTLRIGRYFSGSASLVDDVLFHVQGSPDKPERAASVLVLGKPGSGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPNKAGQHNVMKEALQNHTPQTIVVDEVSDKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMASATNAGNKIQRQRAGAPIFDTIVELERGQVNKWTIVRNVDLAVDAILSGKPYKVEQRTRIPHDSGLQQAGADPEDTAFLLKHAYAMEKLKQYY 884
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: D7FII7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII7_ECTSI) HSP 1 Score: 384 bits (987), Expect = 1.060e-120 Identity = 197/304 (64.80%), Postives = 243/304 (79.93%), Query Frame = 1
Query: 1282 VVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGA-IYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGNKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTRIVDDKQ-QDPGSD--DVAFLLQHRTQANKRQQFY 2181
VVG+++ +G+F GDNRAG PG+LHRISVMR +EG I+GVTLR+GR+F GSAG+VDD F+V SP+ PE + S+L+LG+ G GKTTV+RDICRKIS +T+VIVDTSNEIAG PH AIG SRR+MV DK++QH VM EALQNHTP+TIVVDE+SN EARAC DIKARGVR+VASAHGDL+SL++NP LNTLVGGTTSVTLGD+MA N GNKVQ QRAG P+FDTI++LER +VN W++V NV AVDA+LSG Y++ +RTRI +D Q G+D D AFLL+H + +Q+Y
Sbjct: 2 VVGRLDLEGKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDKPERAASVLVLGKPGCGKTTVLRDICRKISQEQTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGDLQSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDLAVDAILSGKPYKVSQRTRIPNDSGLQQAGADHEDAAFLLKHAYAMEQTKQYY 305
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A7S1EUK0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUK0_9RHOD) HSP 1 Score: 264 bits (675), Expect = 3.570e-76 Identity = 142/319 (44.51%), Postives = 202/319 (63.32%), Query Frame = 1
Query: 1165 LCEVVLDEGTRPYAQFRGRG---RVFLVTDESVVVTRKD---IDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFE-----TLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGNKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
+ ++ LD G RPY G RVFLV D VVT+ D ++ + K+ +F GDNRAGF +LHR+S +R+ + I G+T+R+GR ++ ++ ++DD F P SP SILILG G GKTT+IRDI RK+S + ++DTSNEI G H+ ++GL+ R+M+ S+Q VM+E LQNHTP I++DEI E +A + +K R VRL+ASAHGD ESLM+NP L L+GG +VTLGD+ +K N G K +T+R G P+FD II+L+ E NTW+++ + AVD +LS Y+++RR R
Sbjct: 1 VIDIRLDYGERPYCWVSNEGTKERVFLVNDGPGVVTKVDRELLESITSKL----RFRGDNRAGFDRELHRVSAIRNTDDTIIGLTMRIGRTYENNSYLIDDLLFQQPERGQSP----SILILGRPGCGKTTIIRDIARKLSISNYSHNNNVWVIDTSNEIGGDGDIKHS-SLGLASRMMIPTGSSQKEVMVECLQNHTPDVIIIDEIGRKEEVQAAKTVKERDVRLIASAHGDFESLMRNPDLVGLIGGLQTVTLGDAASKAENDGRKTKTERGGSPIFDVIIELKPREFNTWTIIEDTKTAVDCILSNKSYKVQRRHR 310
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A7S4RVG8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RVG8_9STRA) HSP 1 Score: 258 bits (659), Expect = 3.330e-72 Identity = 153/350 (43.71%), Postives = 210/350 (60.00%), Query Frame = 1
Query: 1087 KELLELMPQAFLLEHLSDRHKINLPD------LCEVVLDEGTRPYAQFRGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKE-----NNGG-----NKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
K+L++L+P L H + ++P L ++ LD G R + G RVFL DE+ +VT ++ID +V K+ G FG DNRAG KLHRIS M ++ G + G+++RVGR+F+G+A M+ DF SILILGE GSGKTT++RD +++ + +VDTSNEIAG PH IG +RR+MV Q VM+E +QNHTP +V+DEI E A + +K RGVR++ASAHGDL L+KN L LVGG +VTLGD AKE +NGG +K + QR G P FD I+++ R E + W + R+ AVDA+L G Y++E RTR
Sbjct: 104 KDLIDLLPAD--LTHELVQEGTDIPTYMAEYALIDINLDVGRRACC-WMGDDRVFLSQDENRLVTMEEIDDIVSKL---GGFGSDNRAGLEQKLHRISGMCNRNGEVIGLSMRVGRWFEGNAAMLVDFLL---------GSDKSILILGEPGSGKTTIVRDAVSVLASRHNVCVVDTSNEIAGDGNIPHP-CIGDARRMMVPSLDAQSNVMVECVQNHTPHVMVIDEIGRPREVEAARTVKQRGVRIIASAHGDLRKLLKNKELRGLVGGVETVTLGDKAAKEEAERRSNGGANGQFSKTKAQRMGEPTFDIIVEVRRGEKHEWRITRDAKTAVDAILDGQKYKVESRTR 437
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A1V9YJN7_9STRA (AAA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJN7_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.930e-71 Identity = 143/312 (45.83%), Postives = 202/312 (64.74%), Query Frame = 1
Query: 1159 PDLCEVVLDEGTRPYAQFRGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGN--KVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
P + ++ LD G RP+A G+ R+FL TDE+VVVT D+ +VV + G FG DNRAG +LHR+S +R++E AI GVT+RVGR +G+A ++ D + + ++L LGE G GKTT+IR++ + ++A + IVDTSNEIAG PH +GL+RRIMV + Q VM+E +QNH P +V+DEI E A + K RGVR++ASAHG L L+KN L LVGG TSVT+GD++A++ GN K+ +R+G +FD I++L R N+W VV + AVDA+L+GG Y ++ RTR
Sbjct: 367 PHVLDIDLDLGRRPWASVAGQ-RLFLDTDEAVVVTPADVARVVDAV---GGFGSDNRAGIERQLHRVSALRNRESAIVGVTIRVGRHVEGNARLLADVL---------GDVTKNVLFLGEPGCGKTTIIREVAQHLAATFNVCIVDTSNEIAGDGDVPHP-CVGLARRIMVPSLAKQAAVMVECVQNHAPEVMVIDEIGRPNEVEAARTCKQRGVRMIASAHGSLRKLLKNQPLRGLVGGVTSVTVGDALARKGADGNLLKIVAERSGESIFDVIVELRRQRYNSWHVVLDAEAAVDAVLAGGSYTVQVRTR 664
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A1V9YTH6_9STRA (AAA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YTH6_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.670e-71 Identity = 147/337 (43.62%), Postives = 209/337 (62.02%), Query Frame = 1
Query: 1093 LLELMPQAFLLEHLSDRHKINLPDLCEVVLDEGTRPYAQFRGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGN-----KVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
+L L+P D K L D +VLD G +P+A + G R FL ++ VT++++D++ + G FG D+RAG +LHR+S +R++ G I G+T+R GR+ +G+A M+ D + S+L LGE G GKTT++R++ R+++A + IVDTSNEIAG PH +GL+RR+MV Q VM++ +QNHTP +V+DEI E A + K RGVR+VASAHGDL L+KN L+ LVGGT SVT+GD++AKE + G K QTQRAG P+F+ +++L R E TW +V + A AVDA+L G MYE + RTR
Sbjct: 331 ILGLLPDDLAEPLRDDAVKCRLQD---IVLDLGRQPWA-WVGGARFFLAGNDERTVTQENLDEITEAV---GGFGSDDRAGLERQLHRVSAVRNRLGEIMGLTIRAGRYIEGNASMIADIL---------AAKNKSVLFLGEPGCGKTTIVREVSRQLAAKYNVCIVDTSNEIAGDGNIPHP-CVGLARRMMVPSLDKQAAVMVKVVQNHTPEVMVIDEIGRANEVEAARTCKQRGVRIVASAHGDLRKLLKNKPLSGLVGGTLSVTVGDALAKEKSRGKSGPIRKQQTQRAGEPIFEVVVELRRGEYTTWRLVMDAAAAVDAILEGQMYEAQVRTR 650
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: D7G6R4_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R4_ECTSI) HSP 1 Score: 249 bits (636), Expect = 2.840e-70 Identity = 146/324 (45.06%), Postives = 200/324 (61.73%), Query Frame = 1
Query: 1213 RGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNS----PECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGL-SRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGNKVQTQRAGIPVFDTIIQLE-RA--EVNTWSVVRNVAPAVDALLSGG-MYEMERRTRIVDDK---QQDPGSDDVAFLLQH 2148
+GRG+V+L D V+VTR ++ VVGK+E G FG DN AGF G LHR+ VMRDK G IYGVT+RVGR+ KG A MVDD F + S + SIL+LG G+GKTT++RD+CRK+S+ ET+VIVDT ++I GA PH AIG SRR+MV QH V+++A +NH+P+TIVVDEIS+ L+ AC +KARG+R+VA A GDL ++ +P + +GG + A ++ + +RAG PVF+ +++LE RA +VV NV VD LL G + E R + +D +D G D + H
Sbjct: 14 KGRGKVYLCKDRGVLVTRYHLNCVVGKLEHLGLFGRDNMAGFDGLLHRVGVMRDKGGKIYGVTIRVGRYAKGMADMVDDLLFNHHTATGSGKRASQAPASILVLGRHGAGKTTLVRDMCRKLSSHETVVIVDTRSDIGGAGVVPHRRAIGEESRRVMVPQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEACMAVKARGIRVVAGAVGDLPYVLDSPEIGAALGGLEDI---QRSANVDDDSDDQMERRAGSPVFEAVVELEGRAGGAAPQGAVVTNVEAVVDELLDKGCVTRPEMRAPVGEDDVMLDEDAGEDAAGGIGGH 334
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A6V2IJU1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IJU1_9STRA) HSP 1 Score: 253 bits (645), Expect = 1.130e-69 Identity = 149/348 (42.82%), Postives = 207/348 (59.48%), Query Frame = 1
Query: 1087 KELLELMPQAFLLEHLSDRHKINLP----DLCEVVLDEGTRPYAQFRGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKE----------NNGGNKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
++L+ L+P+ L + + I DL ++ LD G R + G RVFL DE+ +VT ++ID +V K+ G FG DNRAG KLHRIS M +++G + G+++RVGR+F+G+A M+ D SILILGE GSGKTT++R+ R +++ + +VDTSNEIAG PH IG +RR+MV Q VM+E +QNHTP +V+DEI E A + +K RGVR++ASAHGDL L+KN L LVGG SVTLGD+ AKE N +K + QR G P FD I+++ R E + W + R+ AVDA+L G Y+ E R+R
Sbjct: 158 EDLINLLPEDLLSKLVQKGTHIPTHMAEYDLVDINLDVGRRACC-WMGNDRVFLSDDENRLVTMEEIDCIVSKL---GGFGTDNRAGLEQKLHRISGMCNRKGEVIGLSMRVGRWFEGNAAMLVDLLL---------GSDKSILILGEPGSGKTTIVREAVRVLASRHNVCVVDTSNEIAGDGDIPHP-CIGDARRMMVPSLDAQSSVMVECVQNHTPHIMVIDEIGRPREVEAARTVKQRGVRIIASAHGDLRKLLKNKELRGLVGGVESVTLGDAAAKEEAMRKSNGKANGSFSKTKAQRMGEPTFDVIVEVRRGEKHEWRITRDAKVAVDAILDGQKYKAELRSR 491
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A6B2L513_9EUKA (AAA domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L513_9EUKA) HSP 1 Score: 249 bits (636), Expect = 1.680e-69 Identity = 156/388 (40.21%), Postives = 214/388 (55.15%), Query Frame = 1
Query: 1045 RITQPVAIEDPNSPKELLELMPQAFLLEHLSDRHKINLPD-----LCEVVLDEGTRPYAQF----RGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFT-----------FYVPNSPNSPE--------------------CSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKENNGGNKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
R+T +E +S E+ +L+P+ F + K++ D + +++LD+G P+A R R FL D V T ID VV KI GQFG D RAG G LHRIS M++ +G IYG+T R+GR F ++ D F P+ N+P SIL+LG GSGKTT+IR+I R ++ + +VDTSNEI G + PH+ ++GL+RR+MV Q VM+E LQNHTP IV+DEI E A +K RGVRL+ASAHG+LE+L+KN LN L+GG +VTLGD AK+ N +K+ QR P+FD +I+L + E N W VV V AVD +L G Y ++ R+R
Sbjct: 18 RVTSEPTMEVVSSADEIFKLLPEEF-------KRKVSPADFEYANIRDIILDKGRLPFAWIMFPNRPPQRKFLSDDIKVDSTH--IDSVVSKI---GQFGPDCRAGINGSLHRISCMKNLQGDIYGLTFRIGRSFTKGTHLIMDLLLGNNVSLPNTKFTPPHVENNPTPLNKPFGTLGLPNPAKKSQFVGNSILVLGGPGSGKTTIIREIVRILADKFNVCVVDTSNEICGDGKIPHS-SVGLARRMMVPSVEEQGNVMVECLQNHTPDVIVIDEIGRRNEVEAAATVKQRGVRLIASAHGNLETLVKNKQLNGLIGGVETVTLGDMAAKKTNNNSKLAAQRIAPPIFDVVIELMKGEFNKWRVVTKVEEAVDKILKGKPYPVQIRSR 392
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Match: A0A1E7FZ72_9STRA (AAA domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FZ72_9STRA) HSP 1 Score: 246 bits (629), Expect = 2.210e-69 Identity = 142/337 (42.14%), Postives = 194/337 (57.57%), Query Frame = 1
Query: 1150 INLPDLCEVVLDEGTRPYAQFRGRGRVFLVTDESVVVTRKDIDKVVGKIERDGQFGGDNRAGFPGKLHRISVMRDKEGAIYGVTLRVGRFFKGSAGMVDDFTFYVPNSPNSPECSPSILILGEAGSGKTTVIRDICRKISAFETLVIVDTSNEIAGANRSPHTEAIGLSRRIMVADKSNQHRVMIEALQNHTPRTIVVDEISNNLEARACQDIKARGVRLVASAHGDLESLMKNPSLNTLVGGTTSVTLGDSMAKE------------------------NNGGNKVQTQRAGIPVFDTIIQLERAEVNTWSVVRNVAPAVDALLSGGMYEMERRTR 2088
I + L ++VLD G RP+ R RVFL DE +V +ID++ K+ G+FG DNRAG G+LHR S MRD++ I G+T+RVGR G+A M+ D SILILGE GSGKTT++R+ RK++ + ++ DTSNEIAG PH + IGL+RR+MV Q MIE +QNHTP +V+DEI E +A + +K RGVR++ASAHGDL L+KN L LVGG SVT+GD MAKE +N +K + QR P F+ I+++ R + W +V + A AVD +L G Y+ + R+R
Sbjct: 14 IPMETLSDIVLDIGRRPHCWTRDC-RVFLCDDEFKLVQHSEIDEISAKL---GKFGSDNRAGLNGQLHRFSAMRDRDDQIAGITIRVGRNVNGNAAMLMDLLL---------GSDKSILILGEPGSGKTTIVREAARKLAETKNAIVADTSNEIAGDGTHPH-QCIGLARRMMVPSLDKQSATMIECVQNHTPHVMVIDEIGRPKEVQAARTVKQRGVRMIASAHGDLRRLLKNKDLVGLVGGIESVTIGDDMAKEEAIRKQKLHVQEQGGGEHRSSSMDSNSISKTRVQRCSEPTFEIIVEVSRESRHDWRIVSDSAKAVDRILDGLRYQAQLRSR 336 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1988.5575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1988.5575.1 >prot_H-elongata_contig1988.5575.1 ID=prot_H-elongata_contig1988.5575.1|Name=mRNA_H-elongata_contig1988.5575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=555bp MLCSRFGVCTYNAITNHQSPNWGLTSGRETPIDISSISKHIRSDKLMNAAback to top mRNA from alignment at H-elongata_contig1988:536..14314- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1988.5575.1 ID=mRNA_H-elongata_contig1988.5575.1|Name=mRNA_H-elongata_contig1988.5575.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=13779bp|location=Sequence derived from alignment at H-elongata_contig1988:536..14314- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1988:536..14314- >mRNA_H-elongata_contig1988.5575.1 ID=mRNA_H-elongata_contig1988.5575.1|Name=mRNA_H-elongata_contig1988.5575.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3330bp|location=Sequence derived from alignment at H-elongata_contig1988:536..14314- (Himanthalia elongata Himel1 dioecious)back to top |