mRNA_H-elongata_contig198235.5548.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: D7FI59_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI59_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 5.690e-12 Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 1
Query: 1 GSSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAK 132
G+SV SYLPEDLSFS++VG+GMN +EM +NPRLT LVQNLN+K
Sbjct: 187 GASVASYLPEDLSFSKVVGVGMNDEEMKSNPRLTDTLVQNLNSK 230
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: A0A257B8V3_9BACT (Methyltransferase type 11 n=1 Tax=Chloracidobacterium sp. CP2_5A TaxID=2012633 RepID=A0A257B8V3_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 8.670e-9 Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNA 129
SS S+LPE++ + E+VG+GMNA E+AANPRLT+RLV +LNA
Sbjct: 60 SSWVSHLPEEVGYREVVGIGMNAAELAANPRLTRRLVHDLNA 101
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: UPI001D0C4222 (methyltransferase domain-containing protein n=1 Tax=Methylobacterium sp. W2 TaxID=2598107 RepID=UPI001D0C4222) HSP 1 Score: 57.8 bits (138), Expect = 1.250e-8 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAKVCRPSKGLSCE 165
SS S+LPED++F+ ++G G+NA E+AANPRLT+ VQ+LNA+ P G S +
Sbjct: 60 SSWVSHLPEDMTFARVIGHGLNAAELAANPRLTQHFVQDLNAEPHLPLDGASVD 113
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: UPI001B8BB56D (methyltransferase domain-containing protein n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8BB56D) HSP 1 Score: 57.0 bits (136), Expect = 2.360e-8 Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAKVCRP 144
SS S+LPED+++ +++G+G+NA E+AANPRLT+ V +LNA C P
Sbjct: 60 SSWVSHLPEDIAYRQVIGIGLNAAELAANPRLTQWFVHDLNANPCLP 106
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: UPI0019861360 (Methyltransferase domain-containing protein n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI0019861360) HSP 1 Score: 57.0 bits (136), Expect = 2.440e-8 Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAKVCRP 144
SS S+LPED+ + E+VGLGMN +E+AANPRLTK +VQ+LN + P
Sbjct: 61 SSWISHLPEDVVYREVVGLGMNREELAANPRLTKFVVQDLNREPLLP 107
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: A0A4Q3AJX5_9SPHN (Methyltransferase domain-containing protein n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q3AJX5_9SPHN) HSP 1 Score: 56.6 bits (135), Expect = 3.260e-8 Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNA 129
SS S+LP+D ++E+VG GMNADE+AANPRL +R VQ+LNA
Sbjct: 60 SSWVSHLPDDRLYAEIVGHGMNADELAANPRLDRRFVQDLNA 101
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: A0A7W1ZZY5_9BACT (Methyltransferase domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1ZZY5_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 3.400e-8 Identity = 25/42 (59.52%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNA 129
SS S+LP D+++ + GLGMNA+E+AANPRLT+ ++QNLNA
Sbjct: 63 SSWISHLPNDVAYGRVAGLGMNAEELAANPRLTETIMQNLNA 104
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: K8ZC85_NANGC (Methyltransf_11 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZC85_NANGC) HSP 1 Score: 57.4 bits (137), Expect = 3.600e-8 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 1 GSSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAKVCRPSKGL 156
G+S SYLP LS S VG+G+N +EMAANP LT R+VQ+LNA P+ +
Sbjct: 159 GASAHSYLPPSLSPSRFVGVGVNEEEMAANPALTDRIVQDLNADFSLPASAV 210
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: A0A2S7XN44_9GAMM (SAM-dependent methyltransferase n=1 Tax=Chromatium okenii TaxID=61644 RepID=A0A2S7XN44_9GAMM) HSP 1 Score: 56.6 bits (135), Expect = 6.670e-8 Identity = 26/42 (61.90%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNA 129
SS ++LPE+L+ +E+VGLGMNA E+ ANPRLT+R+V +LNA
Sbjct: 245 SSWQTHLPEELALAELVGLGMNAAELDANPRLTERVVHDLNA 286
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Match: A0A5N6L6R6_9ROSI (Methyltransf_11 domain-containing protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6L6R6_9ROSI) HSP 1 Score: 55.5 bits (132), Expect = 9.030e-8 Identity = 26/47 (55.32%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 4 SSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAKVCRP 144
SS S+LPE+++++E+VGLGMNA E+AANPRL + +VQ+LN + P
Sbjct: 60 SSWVSHLPEEVAYAEVVGLGMNAAELAANPRLARTVVQSLNDQPALP 106 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198235.5548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig198235.5548.1 >prot_H-elongata_contig198235.5548.1 ID=prot_H-elongata_contig198235.5548.1|Name=mRNA_H-elongata_contig198235.5548.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp GSSVDSYLPEDLSFSEMVGLGMNADEMAANPRLTKRLVQNLNAKVCRPSKback to top mRNA from alignment at H-elongata_contig198235:849..1019- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig198235.5548.1 ID=mRNA_H-elongata_contig198235.5548.1|Name=mRNA_H-elongata_contig198235.5548.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=171bp|location=Sequence derived from alignment at H-elongata_contig198235:849..1019- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig198235:849..1019- >mRNA_H-elongata_contig198235.5548.1 ID=mRNA_H-elongata_contig198235.5548.1|Name=mRNA_H-elongata_contig198235.5548.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=342bp|location=Sequence derived from alignment at H-elongata_contig198235:849..1019- (Himanthalia elongata Himel1 dioecious)back to top |