mRNA_H-elongata_contig196869.5490.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: D8LK85_ECTSI (Protein-serine/threonine kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK85_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.330e-21 Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 1
Query: 1 QRHRIDRILDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSPVMV 147
QRHRIDRILD+FFISRISLRFLVDTYISSK NKPGFSGVI+SECSPVMV
Sbjct: 443 QRHRIDRILDNFFISRISLRFLVDTYISSKKNKPGFSGVIESECSPVMV 491
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: A0A836CJJ3_9STRA (Protein-serine/threonine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ3_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.870e-14 Identity = 32/49 (65.31%), Postives = 45/49 (91.84%), Query Frame = 1
Query: 1 QRHRIDRILDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSPVMV 147
++HR+D+IL+SFF+SRI+LRFL++ YI+SK ++PGF G+IQSECSPV V
Sbjct: 150 EQHRVDQILNSFFLSRIALRFLIEQYIASKRHRPGFRGMIQSECSPVEV 198
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: A0A7S3YBE1_HETAK (Protein-serine/threonine kinase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBE1_HETAK) HSP 1 Score: 57.8 bits (138), Expect = 1.680e-8 Identity = 23/46 (50.00%), Postives = 38/46 (82.61%), Query Frame = 1
Query: 1 QRHRIDRILDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSP 138
+R +I+ LD FF+SR+SLRFL++ YI+++ +PGF+G+ Q++CSP
Sbjct: 203 RRGQINAALDHFFLSRVSLRFLMEHYIAARRPRPGFNGIFQTDCSP 248
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: A0A3M6VCB2_9STRA (Protein-serine/threonine kinase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCB2_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 5.790e-7 Identity = 22/41 (53.66%), Postives = 33/41 (80.49%), Query Frame = 1
Query: 25 LDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSPVMV 147
LD+F+ SRI +R LVD +I+++ KPGF+GV++ ECSPV +
Sbjct: 162 LDNFYNSRIGIRMLVDQHIAAQTPKPGFTGVVKDECSPVKI 202
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: R1DE73_EMIHU (Protein-serine/threonine kinase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DE73_EMIHU) HSP 1 Score: 53.1 bits (126), Expect = 7.960e-7 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 1 QRHRIDRILDSFFISRISLRFLVDTYISSKAN-----KPGFSGVIQSECSPVMV 147
Q+ ID LD FF++RI RFL++ Y++S + +PGFSG+IQS CSP V
Sbjct: 196 QQRVIDTHLDEFFLARIGQRFLIEHYLASSGSSGAEQRPGFSGIIQSRCSPFEV 249
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: D0MWV1_PHYIT (Protein-serine/threonine kinase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MWV1_PHYIT) HSP 1 Score: 49.7 bits (117), Expect = 1.330e-5 Identity = 20/41 (48.78%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 25 LDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSPVMV 147
LD+F+ SRI +R LVD +++++ KPGFSG++ E SPV +
Sbjct: 162 LDNFYNSRIGIRMLVDQHVAAQTPKPGFSGIVNDETSPVKI 202
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: A0A8J5M9D2_9STRA (BCDHK_Adom3 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M9D2_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 1.840e-5 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 25 LDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSPVMV 147
LD+F+ SRI +R LVD +I+++ KPGFSG++ E SPV +
Sbjct: 796 LDNFYNSRIGIRMLVDQHIAAQTPKPGFSGIVNVETSPVKI 836
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: L1JNM9_GUITC (Protein-serine/threonine kinase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNM9_GUITC) HSP 1 Score: 48.1 bits (113), Expect = 4.670e-5 Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 13 IDRILDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSP 138
IDR+L SF+ SRI +RFL++ +I+SK + G+SG++ C P
Sbjct: 146 IDRVLTSFYTSRIGVRFLMEHHITSKQHVEGYSGILAKACRP 187
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Match: A0A7S4UHR4_GUITH (Protein-serine/threonine kinase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UHR4_GUITH) HSP 1 Score: 48.1 bits (113), Expect = 4.690e-5 Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 13 IDRILDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSP 138
IDR+L SF+ SRI +RFL++ +I+SK + G+SG++ C P
Sbjct: 225 IDRVLTSFYTSRIGVRFLMEHHITSKQHVEGYSGILAKACRP 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig196869.5490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig196869.5490.1 >prot_H-elongata_contig196869.5490.1 ID=prot_H-elongata_contig196869.5490.1|Name=mRNA_H-elongata_contig196869.5490.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp QRHRIDRILDSFFISRISLRFLVDTYISSKANKPGFSGVIQSECSPVMVback to top mRNA from alignment at H-elongata_contig196869:109..255- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig196869.5490.1 ID=mRNA_H-elongata_contig196869.5490.1|Name=mRNA_H-elongata_contig196869.5490.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=147bp|location=Sequence derived from alignment at H-elongata_contig196869:109..255- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig196869:109..255- >mRNA_H-elongata_contig196869.5490.1 ID=mRNA_H-elongata_contig196869.5490.1|Name=mRNA_H-elongata_contig196869.5490.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at H-elongata_contig196869:109..255- (Himanthalia elongata Himel1 dioecious)back to top |