mRNA_H-elongata_contig19676.5486.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: D7FYU3_ECTSI (Elongation factor G, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYU3_ECTSI) HSP 1 Score: 799 bits (2063), Expect = 1.280e-284 Identity = 400/471 (84.93%), Postives = 432/471 (91.72%), Query Frame = 1
Query: 136 RHAYRIHQKAVASSRPTGIHRRTMWRYLSAQPSEAVEQEPLAVGHVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKKGKKGGGGDTTDRFSKA 1548
RH + Q VA SRP HR+TMWR LSAQPSE +E GH+ KTRNIGISAHIDSGKTTLTERIL+YTG+INSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFC W HHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPR+AFINKLDRAGANPQRVI+DMR+QLKL+ AAVQLPIGLED H+GVVD+VCG+AFQFSGVKGENVEEI VP++MK DV A RALLVEMMAD+DE+VAELFLMEEEVDD TLKAA+RRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEV N+ALDT E+KVL++C D+PTLALAFKLEEGKFGQLTYMR+YQG+ISKGDML+NLNSGKKLKVPRLVRMHS+EM+DV+ VAAGDVVAMFGVDCSSMDTFTDG+T+LAMTSMFVPEPVMSLAITPKK KKGGG DT D+FSKA
Sbjct: 6 RHVRGLQQAVVAGSRPAARHRQTMWRSLSAQPSETIEGRTSPAGHIAKTRNIGISAHIDSGKTTLTERILYYTGRINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCEWDNHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRVAFINKLDRAGANPQRVINDMRSQLKLNTAAVQLPIGLEDGHAGVVDLVCGRAFQFSGVKGENVEEIAVPESMKDDVVAGRALLVEMMADLDEDVAELFLMEEEVDDATLKAAMRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVPNFALDTTNDEKKVLVECCPDSPTLALAFKLEEGKFGQLTYMRLYQGSISKGDMLFNLNSGKKLKVPRLVRMHSSEMQDVDTVAAGDVVAMFGVDCSSMDTFTDGRTQLAMTSMFVPEPVMSLAITPKKSKKGGGSDTADKFSKA 476
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: A0A836CCY0_9STRA (Elongation factor G, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCY0_9STRA) HSP 1 Score: 615 bits (1586), Expect = 8.390e-213 Identity = 311/409 (76.04%), Postives = 351/409 (85.82%), Query Frame = 1
Query: 283 RNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKKGKK 1509
RNIGISAHIDSGKTTLTERILFYTG+I +IHDVRG+DGVGAKMDSM+LEREKGITIQSAATFC W H+NIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRY VPRLAFINKLDR G++P++VI D+RNQLKL+AAAVQ+PIGLE +H GVVDV+ G A+ F G KGE VEE VP+++K +AAR LVE +AD+DEEVAELF+ EE+V LK AIRR T++ KFVPVFMGSAYKN+GVQ LLDGVVDYLP+P EV N+ALDTA E +V + C D PT+ALAFKLEE KFGQLTYMRVYQG I +G L+NL +GKK+KVPRLVRMHS EME+V + AGDVVAMFGVDC+SMDTFTDG T+LAM+SMFVPEPVMSLAI P G K
Sbjct: 5 RNIGISAHIDSGKTTLTERILFYTGRIKAIHDVRGRDGVGAKMDSMELEREKGITIQSAATFCSWGDAHVNIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYGVPRLAFINKLDRVGSSPRKVIADLRNQLKLNAAAVQVPIGLEAAHDGVVDVIRGVAYYFRGEKGEMVEEAPVPEDLKAAAAAARQELVERVADVDEEVAELFICEEDVPKDLLKRAIRRQTIAQKFVPVFMGSAYKNRGVQPLLDGVVDYLPSPAEVPNFALDTAADEARVALSCDPDKPTVALAFKLEECKFGQLTYMRVYQGRIERGHFLHNLKTGKKIKVPRLVRMHSNEMEEVTSAGAGDVVAMFGVDCASMDTFTDGTTQLAMSSMFVPEPVMSLAIKPDAGPK 413
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: A0A6S9LCG4_HETAK (Elongation factor G, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LCG4_HETAK) HSP 1 Score: 597 bits (1538), Expect = 5.330e-205 Identity = 313/464 (67.46%), Postives = 365/464 (78.66%), Query Frame = 1
Query: 175 SRPTGIHRRTMWRYLSAQPSEAVEQEPLAVG------HVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKKGKKGGGGDTTDRFSKA 1548
+R T RR + L PS V PL+ ++ K RNIGISAHIDSGKTTLTERILFYTG+IN+IHDV+GKDGVGAKMDSMDLEREKGITIQSAATF W H INIIDTPGHVDFTIEVERALRVLDG VLVLCGV+GVQSQSLTVDRQMKRY+VPR+AFINKLDR G+NP +VI D+R QL L+AAAVQLP+GLE+ H+GVVD+V +++ F+G GE +EE VP++++ R L+E +AD D+E+AELFLMEEE D PTLKAAIRR T++L FVPVFMGSA+KNKGVQ LLDGVVDYLP P EV N ALD E V + C AP +ALAFKLEEG+FGQLTYMR+YQG+I KG ++NLN+GKKLKVPRLVRMHS EMED+E AGDVVAMFGVDC+SM+TFTDG+ + AMTSM VP+ VMSLA+ PK K +D F+KA
Sbjct: 15 ARTTAFSRRLLKNNL---PSMGVYGVPLSTASFSTAEYMSKYRNIGISAHIDSGKTTLTERILFYTGRINAIHDVKGKDGVGAKMDSMDLEREKGITIQSAATFAQWGDHFINIIDTPGHVDFTIEVERALRVLDGGVLVLCGVAGVQSQSLTVDRQMKRYNVPRVAFINKLDRMGSNPWKVIRDLREQLALNAAAVQLPLGLEERHTGVVDLVERRSYVFAGAHGEVIEEGPVPEDLQELAQEKRHELIERLADHDDEIAELFLMEEEPDVPTLKAAIRRQTIALNFVPVFMGSAFKNKGVQALLDGVVDYLPTPREVPNTALDLDNHEAPVAVACDPAAPLVALAFKLEEGRFGQLTYMRIYQGSIKKGGWIHNLNTGKKLKVPRLVRMHSDEMEDIEEAGAGDVVAMFGVDCASMETFTDGRLKWAMTSMHVPDAVMSLAVKPKTTKM------SDNFTKA 469
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: I2CNZ5_NANGC (Elongation factor G, mitochondrial n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CNZ5_NANGC) HSP 1 Score: 594 bits (1532), Expect = 1.280e-203 Identity = 291/411 (70.80%), Postives = 347/411 (84.43%), Query Frame = 1
Query: 268 HVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKK 1500
H+ K RNIGISAHIDSGKTTLTERILFYTG+I IHDV+GKDGVGAKMDSMDLEREKGITIQSAAT+C W HHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGV+GVQSQS+TVDRQMKRY+VPRLAFINKLDRAGANP +V+ D+R L+L+AAAVQ+PIGLE H GVVD++ KA+ F+G +GE V E+ + ++ V + R ++E +AD+D+E+AELFL E EV L+AAIRR T++L FVPVFMGSA+KNKGVQ LLDGVVDYLPNP +V NYALD + E +V + C + P +ALAFKLEEGKFGQLTYMRVYQGTI +G L+N+ + KK+KVPRLVRMHS E+E++E+++AGDV AMFGVDCSSMD+FTDG + A+TSMFVP PV+SLA+ PK+
Sbjct: 67 HIAKLRNIGISAHIDSGKTTLTERILFYTGRIREIHDVKGKDGVGAKMDSMDLEREKGITIQSAATYCSWGDHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVAGVQSQSITVDRQMKRYNVPRLAFINKLDRAGANPWKVVGDLRQYLRLNAAAVQVPIGLEAEHKGVVDLIDRKAYVFAGERGEVVTEVPIEGGLEATVLSKRNEMIERLADVDDEIAELFLAETEVPPEVLRAAIRRQTLALAFVPVFMGSAFKNKGVQRLLDGVVDYLPNPSQVTNYALDLTQDEARVPVPCKENLPAVALAFKLEEGKFGQLTYMRVYQGTIKRGGWLFNMRNDKKVKVPRLVRMHSNELEEIESISAGDVCAMFGVDCSSMDSFTDGTVKYALTSMFVPAPVISLAVKPKQ 477
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: A0A7S4QBF3_9STRA (Elongation factor G, mitochondrial n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QBF3_9STRA) HSP 1 Score: 580 bits (1495), Expect = 1.000e-198 Identity = 294/426 (69.01%), Postives = 345/426 (80.99%), Query Frame = 1
Query: 274 KKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEIT-VPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKKGKKGGGGDTTDRFSKA 1548
KK RNIGISAHIDSGKTTLTERIL+YTG+INSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFC W HINIIDTPGHVDFTIEVERALRVLDG +LVLCGVSGVQSQSLTVDRQMKRY+VPR AF+NKLDR G+NP +VIDD+RNQLKL+AAAVQ+PIGLE H G+VD++ KA +F G +GE +EE+ +P +K V R L+ +AD+D+++AELFLMEEE LK AIRR T++ FVPVFMGSA+KNKGVQ LLDGV+DYLP P E AN+ALD +KGE++V + SSD P LALAFKLEE FGQLTYMR+YQG + KG+ + N+N GKK+K+ R+VRMHS +ME++ AG+VVAMFG+DC SMDTF+DG AM+SMFVPEPVMSLA+ P K + FSKA
Sbjct: 27 KKHRNIGISAHIDSGKTTLTERILYYTGRINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCQWKDAHINIIDTPGHVDFTIEVERALRVLDGGILVLCGVSGVQSQSLTVDRQMKRYNVPRAAFVNKLDRQGSNPWKVIDDLRNQLKLNAAAVQIPIGLESEHEGIVDILEQKAIRFKGDRGEVLEEVMEIPDELKELVEEKREELISRLADVDDDIAELFLMEEEPTVQDLKDAIRRQTLTCSFVPVFMGSAFKNKGVQPLLDGVLDYLPEPHEKANFALDRSKGEQEVQVTASSDDPLLALAFKLEETPFGQLTYMRIYQGMLKKGNHITNVNDGKKIKLARIVRMHSDDMEEITEAGAGEVVAMFGIDCKSMDTFSDGDMNFAMSSMFVPEPVMSLAVKPANTKM------QNNFSKA 446
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: I0Z207_COCSC (Elongation factor G, mitochondrial n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z207_COCSC) HSP 1 Score: 577 bits (1487), Expect = 1.730e-197 Identity = 296/461 (64.21%), Postives = 356/461 (77.22%), Query Frame = 1
Query: 169 ASSRPTGIHRRTMWRYLSAQP-SEAVEQEPLAVGHVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKKGKKGGGGDTTDRFSKA 1548
A+S P+ H ++ SA P ++ +P + H+ RNIGISAHIDSGKTTLTERILFYTG+I++IH+VRGKDGVGAKMD MDLEREKGITIQSAAT+C W INIIDTPGHVDFTIEVERALRVLDGA+LVLC V GVQSQS+TVDRQM+RY VPRLAFINKLDRAGA+P +VI M+++L+L+ A VQLPIGLE+ H G++D+V KAF F G GE + E+ + + R+ LVE +AD+DE++ ELFLMEE +D+ TL+ AIRRAT SL FVP+FMGSAYKNKGVQLLLDGV DYLP P +V N ALD A E+ V + CS D P +ALAFKLEEG+FGQLTYMR+Y GTISKGD + N+ +GK++KVPRLVRMHS +MED+ AGD+VAMFG++CS+ DTFTDG R MTSM VP+PVMSLAI PK + G FSKA
Sbjct: 5 AASHPSRTHAPSIGTNFSALPLAQTATNDPDELSHI---RNIGISAHIDSGKTTLTERILFYTGRIHAIHEVRGKDGVGAKMDHMDLEREKGITIQSAATYCTWKDTSINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYDVPRLAFINKLDRAGADPWKVIGQMQDKLRLNCAPVQLPIGLEEDHKGLIDLVKMKAFAFEGPNGETITEVPMSAEQAAWAAEKRSELVEKLADVDEQLGELFLMEEPIDEETLRGAIRRATTSLAFVPIFMGSAYKNKGVQLLLDGVTDYLPAPSDVGNSALDAANEEQPVALPCSRDGPLVALAFKLEEGRFGQLTYMRIYSGTISKGDNVINVVTGKRIKVPRLVRMHSNDMEDIMEAGAGDIVAMFGIECSTGDTFTDGTVRYTMTSMNVPDPVMSLAILPKTREAAGN------FSKA 456
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: E1Z1Z5_CHLVA (Elongation factor G, mitochondrial n=2 Tax=Chlorella clade TaxID=2511126 RepID=E1Z1Z5_CHLVA) HSP 1 Score: 578 bits (1489), Expect = 2.640e-197 Identity = 297/446 (66.59%), Postives = 354/446 (79.37%), Query Frame = 1
Query: 211 RYLSAQPSEAVEQEPLAVGHVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKKGKKGGGGDTTDRFSKA 1548
R +A P+ E++ A+ V RNIGISAHIDSGKTTLTERILFYTG+I++IH+VRGKDGVGAKMDSMDLEREKGITIQSAATFC W HINIIDTPGHVDFTIEVERALRVLDGA+LVLC V GVQSQS+TVDRQM+RY VPR+AFINKLDRAGA+P +VI MR +L+L+AAAVQLPIG EDS G+VD+V +AF F G GE V E+ + +K +V A RA LVE +A++DE + E F++EE +D L AIRR+ + LKFVPVFMGSA+KN+GVQLLLDGV DYLP+PL+V N+ALD KGEE+VL+ CS P +ALAFKLEEG+FGQLTYMR+Y G + KGD + N SGK++KVPRLVRMH+ E+ED+ AAGD+VAMFGV+C+S DTF DG T LAMTS+ VPEPVMSLA+ PK D + FSKA
Sbjct: 51 RLYAALPAGVTEEDKAALTDV---RNIGISAHIDSGKTTLTERILFYTGRIHAIHEVRGKDGVGAKMDSMDLEREKGITIQSAATFCRWKDTHINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYDVPRVAFINKLDRAGADPWKVIRQMREKLRLNAAAVQLPIGSEDSLRGLVDLVERRAFHFEGSSGEKVVEVPLSAELKEEVEAKRAELVEHVAEVDEALGEHFVLEEPIDGGMLADAIRRSVLGLKFVPVFMGSAFKNRGVQLLLDGVSDYLPSPLDVNNFALDLDKGEERVLLPCSKTGPLVALAFKLEEGRFGQLTYMRIYSGVVRKGDNIVNQTSGKRIKVPRLVRMHADELEDITEAAAGDIVAMFGVECASGDTFCDGATTLAMTSISVPEPVMSLAVAPK------ARDQSANFSKA 487
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: A0A024UUS5_9STRA (Translation elongation factor G, variant n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUS5_9STRA) HSP 1 Score: 570 bits (1468), Expect = 1.050e-196 Identity = 289/427 (67.68%), Postives = 347/427 (81.26%), Query Frame = 1
Query: 220 SAQPSEAVEQEPLAVGHVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENV-EEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKT-RLAMTSMFVPEPVMSLAITP 1494
+A +E E+ P G++ RNIGISAHIDSGKTTLTERILFYTG+IN+IHDVRGKDGVGAKMDSM+LEREKGITIQSAAT+ W +INIIDTPGHVDFTIEVERALRVLDG VLVLCGVSGVQSQSLTVD+QMKRY VPR+AFINKLDR GANP +VI D+R QLKL+AAAVQ+PIG+ED GVVD+V + ++ G GE + +P N+K V+ R ++E +AD+D+E+ ELFLMEEE L AIRRAT++ KFVPVFMGSA+KNKGVQ +LDGV+DYLP+P E N ALD K EE VL+ CS DAP LALAFKLEEG+FGQL+YMR+Y GT+ +G +YN+++ K++KVPRLV+MHS EMEDVE V+AG+VVAMFGVDC+SMDTF+D + ++ MTS+ VPEPVMSLAI P
Sbjct: 29 AALNTELFEKYPHPEGYMNNLRNIGISAHIDSGKTTLTERILFYTGRINAIHDVRGKDGVGAKMDSMELEREKGITIQSAATYAQWKDANINIIDTPGHVDFTIEVERALRVLDGGVLVLCGVSGVQSQSLTVDKQMKRYGVPRIAFINKLDRMGANPWKVIKDLRKQLKLNAAAVQVPIGIEDQLEGVVDLVRMQVYRNDGPSGETILTSSEIPDNLKELVAEKRLEMIERLADVDDEIGELFLMEEEPTVDQLVGAIRRATIAHKFVPVFMGSAFKNKGVQPMLDGVIDYLPSPSEAQNIALDQGKNEEPVLVPCSPDAPLLALAFKLEEGRFGQLSYMRIYSGTLKRGGFIYNMSNMKRIKVPRLVKMHSNEMEDVEEVSAGEVVAMFGVDCASMDTFSDSNSSKMTMTSLHVPEPVMSLAIIP 455
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: A0A7S3MFH5_9STRA (Elongation factor G, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFH5_9STRA) HSP 1 Score: 572 bits (1475), Expect = 1.450e-195 Identity = 283/410 (69.02%), Postives = 335/410 (81.71%), Query Frame = 1
Query: 271 VKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVEEITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGKTRLAMTSMFVPEPVMSLAITPKK 1500
++ +RNIGISAHIDSGKTTLTERILFYTG+IN IHDVRGKDGVGAKMDSMDLEREKGITIQSAAT+C W +HINIIDTPGHVDFT+EVERALRVLDGA+LV+CGVSG+QSQ+LTVDRQMKRY+VPR+AF+NKLDR GANP + ++ MR QLKL AA VQ+P+GLE H GVVD++ +A F G KG N++ VP+ RA L+E +AD+D+E+AELF+ EEE LK AIRR T++ KFVPVFMGSA+KNKGVQLLLDGV DYLP P EV N ALD + GE +V +KC AP +ALAFKLEE KFGQLTY+R+YQGT+ KG M+ N +GKK+KVPRLVRMHS EM DV++ AGDVVA+FG+DCSSMDTFTDG +M SMFVP PVMSL++ PK+
Sbjct: 34 MRNSRNIGISAHIDSGKTTLTERILFYTGRINEIHDVRGKDGVGAKMDSMDLEREKGITIQSAATYCRWGQNHINIIDTPGHVDFTVEVERALRVLDGAILVVCGVSGIQSQTLTVDRQMKRYNVPRVAFVNKLDRMGANPLKALNGMRQQLKLGAALVQVPMGLEGEHEGVVDIINREAVYFLGEKGLNIQRKPVPEQYVEQCEKYRAELIERVADIDDEIAELFMAEEEPTPKQLKDAIRRQTIARKFVPVFMGSAFKNKGVQLLLDGVNDYLPAPPEVRNVALDVSNGEAEVELKCDGGAPLVALAFKLEESKFGQLTYVRIYQGTLKKGSMVLNTKTGKKVKVPRLVRMHSNEMLDVDSAGAGDVVALFGMDCSSMDTFTDGTINYSMVSMFVPNPVMSLSVKPKE 443
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Match: F0WLH9_9STRA (Elongation factor G, mitochondrial n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLH9_9STRA) HSP 1 Score: 571 bits (1472), Expect = 6.440e-195 Identity = 290/447 (64.88%), Postives = 353/447 (78.97%), Query Frame = 1
Query: 214 YLSAQPSEAVEQEPLAVGHVKKTRNIGISAHIDSGKTTLTERILFYTGKINSIHDVRGKDGVGAKMDSMDLEREKGITIQSAATFCHWSGHHINIIDTPGHVDFTIEVERALRVLDGAVLVLCGVSGVQSQSLTVDRQMKRYSVPRLAFINKLDRAGANPQRVIDDMRNQLKLDAAAVQLPIGLEDSHSGVVDVVCGKAFQFSGVKGENVE-EITVPKNMKVDVSAARALLVEMMADMDEEVAELFLMEEEVDDPTLKAAIRRATVSLKFVPVFMGSAYKNKGVQLLLDGVVDYLPNPLEVANYALDTAKGEEKVLIKCSSDAPTLALAFKLEEGKFGQLTYMRVYQGTISKGDMLYNLNSGKKLKVPRLVRMHSAEMEDVEAVAAGDVVAMFGVDCSSMDTFTDGK-TRLAMTSMFVPEPVMSLAITPK-KGKKGGGGDTTDRFSK 1545
+ A + +E ++ RNIGISAHIDSGKTTLTERIL+YTGKINSIHDVRGKDGVGAKMDSM+LEREKGITIQSAATFC W +HINIIDTPGHVDFTIEVERALRVLDG +LVLCGVSGVQSQSLTVD+QMKRY VPR+AFINKLDR GAN +VI D+R QLKL+A A+Q+PIG+E S G++D+V KA + G GE V+ +P+ + + R L+E +A++DEE+ ELFLMEEE D +K AIRRAT++ +FVPV MGSA+KN+GVQ LLD VV YLP P +V NYALD +KGEEKVL+ CS AP LALAFKLEEGKFGQLTYMR+Y G++ +G +YN+N+ K++KVPRLV+MHS EMEDVE V+AG+V+AMFGV+C+SMDTF+D T+ +TS+ VPEPVMSLA+TPK KG+ +RF +
Sbjct: 33 FCEAAAIRSFAEEDAPADYMSNLRNIGISAHIDSGKTTLTERILYYTGKINSIHDVRGKDGVGAKMDSMELEREKGITIQSAATFCQWKENHINIIDTPGHVDFTIEVERALRVLDGGILVLCGVSGVQSQSLTVDKQMKRYGVPRIAFINKLDRMGANVDKVISDLRTQLKLNACALQIPIGIEHSLEGIIDLVEMKAIRNEGDNGEIVQVSDEIPEGLIEIAARKRTELIEHLANVDEEIGELFLMEEEPDIDQMKNAIRRATIAQQFVPVLMGSAFKNRGVQPLLDAVVSYLPAPADVPNYALDQSKGEEKVLVPCSPKAPLLALAFKLEEGKFGQLTYMRIYSGSLKRGSFIYNMNNMKRIKVPRLVKMHSNEMEDVEQVSAGEVIAMFGVECASMDTFSDSNATKYTLTSLHVPEPVMSLAVTPKDKGQSSNFSKALNRFQR 479 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19676.5486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19676.5486.1 >prot_H-elongata_contig19676.5486.1 ID=prot_H-elongata_contig19676.5486.1|Name=mRNA_H-elongata_contig19676.5486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=482bp MALFLRHAYRIHQKAVASSRPTGIHRRTMWRYLSAQPSEAVEQEPLAVGHback to top mRNA from alignment at H-elongata_contig19676:179..6116- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19676.5486.1 ID=mRNA_H-elongata_contig19676.5486.1|Name=mRNA_H-elongata_contig19676.5486.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5938bp|location=Sequence derived from alignment at H-elongata_contig19676:179..6116- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19676:179..6116- >mRNA_H-elongata_contig19676.5486.1 ID=mRNA_H-elongata_contig19676.5486.1|Name=mRNA_H-elongata_contig19676.5486.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2892bp|location=Sequence derived from alignment at H-elongata_contig19676:179..6116- (Himanthalia elongata Himel1 dioecious)back to top |