mRNA_H-elongata_contig19664.5485.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A6H5L8R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R8_9PHAE) HSP 1 Score: 369 bits (948), Expect = 3.270e-111 Identity = 248/548 (45.26%), Postives = 309/548 (56.39%), Query Frame = 3
Query: 24 SAPGTENSSITHTHPTAGLLARLSSEFHDLLLCHPDLDTSGVVDGDCPTSKMETHRSAAAVSPGKXXXXXXXXXLISLISSASHERRLFRLKKVDRLEMSKKVAKCMATARVLVVEKAVEEFKQRYAQKITRLESNIRGLILRFVASVDT---------AAKCHHCEREMERLDLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEATESCRVKGLFCHVPGNSLEQVVLYGM----------DSLREGGAT--GASGSAHRSAWDEDPIDPLWASRNEGLVRRVVKGQGEHDTISDTLGN----FPRTFSRHSTLEEEREYANPP-----DRTRGMREMS-----VTTICSNGRRRKEDKNPSTSQRSLDED-GSVSGLRLLALCRVTIGSMYVSSAPSL----HRAGGDAV-------------AESIAVRASVRQEAAPPSVESQPSTV--LICPPSGQAEFDSVYFPREEEYRLFNKAFVLPEFLVVHRFVARPSPT 1502
SAP NS + HP++GLLA LS E DLLLCHP+ + + AV P L L+S +RR R ++VD LE SK +A+ +ATAR+ + AV +++ A+ +L+ + L+L F A+ AA+ HC RE+ERL+L+ARLASLA TA HRT+G VVLRRLPPTHPQH RC+RAAT NV+PGFFSS+S YGAVRV DIYK+EN+FLLERFQRAAEA E C+VKGLFCHVP SLE VVLYGM D G A G +G + WD DPID L V G +T G FPR FSRHSTLEEER+YAN D RGMR+ ++ C +R++ + P R + G+VSGLR LALCRV IGS +V++ S R G +SIA++ RQ A+ P P+ L PP GQAEFDS++FPREEEYR+ N+AFVLPEFLVVHRFVA P+
Sbjct: 96 SAPAAPNS-MGSGHPSSGLLAGLSGELRDLLLCHPESNAA---------------EPGGAVDPAAGG-------LCGLVSGVRIQRRSVRRRRVDYLETSKTIARSLATARLAAAQAAVGGYREGCAESRAQLDCRLGRLVLSFAAAASAEMGAEDAQMAAEDEHCRREVERLELSARLASLATTAEHRTRGCVVLRRLPPTHPQHERCLRAATENVRPGFFSSESRYGAVRVLDIYKMENRFLLERFQRAAEAREPCKVKGLFCHVPDASLEHVVLYGMGGAGALMDECDGYSSGAALTDGKAGLLPTNDWDRDPIDSF-------LGAPTVGASGRRETSGGNNGKRPLEFPRAFSRHSTLEEERQYANRSSCGCDDEDRGMRQQHRSWSPPSSGCHPLQRQRRHRVPGDGSREDGQQRGAVSGLRFLALCRVMIGSTHVAATTSPVTWGQRKGNGGTQPHDPKSLSPRHRTDSIALQK--RQRASSPRSAGHPADEFSLPTPPPGQAEFDSIFFPREEEYRILNEAFVLPEFLVVHRFVAAEPPS 611
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: D8LSF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF4_ECTSI) HSP 1 Score: 318 bits (814), Expect = 4.180e-94 Identity = 263/644 (40.84%), Postives = 326/644 (50.62%), Query Frame = 3
Query: 474 AAKCHHCEREMERLDLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEATESCRVKGLFCHVPGNSLEQVVLYGMDSLREGGATGA---------SGSAHRSA----------WDEDPIDPLWASRNEGLVRRVVKGQGEHDTISDTLGN----FPRTFSRHSTLEEEREYANPP-----DRTRGMREMSVT-TICSNG-----RRRKEDKNPSTSQRSLDEDGSVSGLRLLALCRVTIGSMYVSSAPS-----------------------LHRAGGDAVAESIAVRASVRQEAAPPSVESQPSTVLICPPSGQAEFDSVYFPREEEYRLFNKAFVLPEFLVVHRFVARPSPTLSPSSVTNSSRIAAFGDSGNGGG---LKTAVDTTSRDK-RGVADEVP-RGHSNSDNVGTS----------------------------------RTAASVVAGIEAAMIR-AQPSRS-----------GMLGTPSYFEASSSP-----STDSKVDAGCATGGCDIPVVAAGLG----------------RRQERGSGRPDRDSIVRAVELNFERFWCERDKLRNLEKEEMARLATRAKVPGQPP 2018
AA+ C RE+ERL+++ RLASLA TA HRT+G VVLRRLPPTHPQH RC+RAAT NV+PGFFSS+S YGAVRV DIYK+EN+FLL+RFQRAAEA E C+VKGLFCHVP SLE VVLYGM G TGA SGSA ++ WD DPID + G+ G +T G FPR FSRHSTLEEER+YAN D RGMR+ + ++ S+G R+R+ S E G+VSGLR LALCRV IGS +V++ S HR D++A RAS + A P+ E L PP GQAEFDSVYFPREEEYR+ N+AFVLPEFLVVHRFVA P+ + R + ++ G G + AV T R++ + A P G ++ V + + AASVV GIEAAM A P R+ G+ G P+ EA + P S + DA T D VV G + R + R RDSIV +VE FER+W E ++LR L+K E+ + A QPP
Sbjct: 9 AAEGELCRREVERLEISGRLASLATTAEHRTRGCVVLRRLPPTHPQHERCLRAATENVRPGFFSSESRYGAVRVLDIYKMENRFLLDRFQRAAEAREPCKVKGLFCHVPDASLEHVVLYGM------GGTGALMDECGGYSSGSASKTDGKAGLLPTYDWDLDPIDSFLGAPTVGV-------SGGRETSGGNNGKRPLEFPRAFSRHSTLEEERQYANRSSCGCDDEDRGMRQHHASWSLPSSGCHPLQRQRRHRVPGDGSHEDGQERGAVSGLRFLALCRVMIGSTHVAATTSPATWGQGKGNGGTPPHDPKSLSPRHRT--DSIALQKRQRASSPRSAGRPADEFS----LPTPPPGQAEFDSVYFPREEEYRILNEAFVLPEFLVVHRFVAAEPPSGPTVNTEGHDRHSPRTNASCGVGNDDVAVAVMTGGREQDQPTAGVHPVHGKKGAEKVSVAGGRCKREYQEQGRCRFPSNCAKGVATPSSMPPRLQDAASVVEGIEAAMEGLALPQRNNFRPYTVTGNDGVGGGPTAREAVAPPCISPCSNGCRGDASTLTTSRDGTVVGGRAGSLSTTPNVDRGDVGTTKGSRRENERARRDSIVCSVEQEFERYWQEMNRLRELQKSEVVKGALSRGKLRQPP 633
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A7S2WFR5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFR5_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.780e-36 Identity = 126/411 (30.66%), Postives = 182/411 (44.28%), Query Frame = 3
Query: 420 LESNIRGLILRFVASVDTAAKCHH---------CEREMERLDLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSP----YGAVRVTDIYKIENKFLLERFQRAAEATESCRVKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAHRSAWDEDPIDPLWASRNEGLVRRV------------VKGQGEHDTISDTLGNFPRTFSRHSTLEEEREYANPPDRTRGMREMSVTTICSNGRRRKE--------DKNPSTSQRSLDEDG------SVSGLRLLALCRVTIGSMYVSSAPSLHRAGGDAVAESIAVRASVRQEAAPPSVESQPSTVLICPPSGQ-AEFDSVYFPREEEYRLFNKAFVLPEFLVVHRFVAR-PSPTLSPSSVTNS 1529
L+S + G++LR+ A + + C+ + L A RL A H T+G ++L+RLP +HPQ+ RC RAAT NVK FF++ Y V V D+YKIEN+ LL+ FQ + +E +VKGLFC VP +E++V++G A + A + +PI ++G FPR FSRHSTLEE+R N R + + +M +R +E + + ++ ++ +G SG R LALCRV IG ++V+S +SQ ++ + P GQ A+FDS+Y P EEYRL N VLPEFLV +RF P P S T S
Sbjct: 3 LDSRLAGVMLRYAAIAEAEVQSLSARRGEEVVACDLHRKHLSTARRLGLFALHLEHETRGKIMLKRLPQSHPQYQRCRRAATENVKSDFFAANKQTNGRYTGVTVLDVYKIENRLLLKDFQNTSATSEPSKVKGLFCRVPRKCVERLVVHGAHQRPPPLLQNAFQHSWVDATEGEPITGGGVDEXXXXXXXXXXXXXXXXGNMSMEGYAARAVRRSPCLPFPRNFSRHSTLEEDRPAVNGLSRKKEIEQMMQEMA----QRHEEPGDKWLGLQQELARAKADMEAEGLGDGVEPGSGTRFLALCRVMIGKIFVAS-------------------------------KSQETSPFLAAPDGQLADFDSIYSPTREEYRLLNPTNVLPEFLVEYRFTEELPLPPGFESGQTRS 378
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A7S1UH08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH08_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.440e-30 Identity = 125/390 (32.05%), Postives = 185/390 (47.44%), Query Frame = 3
Query: 492 CEREMERLDLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSP---------YGAVRVTDIYKIENKFLLERFQRAAEATESCRVKGLFCHVPGNSLEQVVLYGM-----DSLREGGATGASGSAHRSAWDEDPIDPLWASRNEGLVRRVVKGQGEHDTISDTLGNFPRTFSRHSTLEEEREYAN------PPDRTRGMREMSVTTICSNGRRRK-EDKNPSTSQRSLDEDGSV--SGLRLLALCRVTIGSMYVSSAPSLHRAGGDAVAESI---AVRASVRQEAAPPSVESQPSTVLIC---------------------PPSGQAEFDSVYFPREEEYRLFNKAFVLPEFLVVHRFVA-RPSPTLSPSS 1517
CE+ ++ + L + H T+G+VVL+RLPPTHPQH RC RAA NV+ G+F + Y ++V D+YKIENK LLE+FQ AA + +VKGLFC VP + LE V+L GM + L++ A + +W + +G RVVK E I FPR FSRHSTL EE E + PP R + + T S G E +P+T + + + + R ++ +S+A +GGD+ A ++ +R ++ +A P +S +++C PP +FDS+Y P EEYRL +VLPEF+V++R+ A RPS + S+
Sbjct: 163 CEQMSDQFKIIRHLNLFSLHLEHETRGSVVLKRLPPTHPQHLRCKRAALENVRKGYFQAAPAALPEGSFLRYTGLKVLDVYKIENKLLLEKFQAAAARDKPGKVKGLFCTVPMDCLEHVILSGMFPNPSERLKQ---------AFKGSWFS-----MGQRGGQGHAARVVK---EARPIP-----FPRNFSRHSTLLEEAELVHGGLANLPPAPKRTL--LGKPTPQSAGEEAAGEASSPATEGAGVGNTSTTFQASKEYRSAVRAAHAAVLLSNA-----SGGDSAAAAVPEDGLRQALSDDA-PLGEDSDIRLLMLCRVMIGDIFICDESQASFPERVPPG---KFDSMYSPALEEYRLLKPEYVLPEFIVLYRYTAARPSARVLASA 519
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A2R5GCW3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCW3_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.930e-24 Identity = 100/325 (30.77%), Postives = 143/325 (44.00%), Query Frame = 3
Query: 555 AHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEATESCRVKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAHRSAWDEDPIDPLWASRNEGLVRRVVK-----GQGEHDTISDTLGNFPRTFSRHSTLEEEREYANPPDRTRGMREMSVTTICSNGRRRKEDKNPSTSQRSLDEDGSVSGLRLLALCRVTIGSMYVSSA--PSLHRAGGDAVAESIAVRASVRQEAAPPSVESQPSTVLICPPSGQAEFDSVYFPREEEYRLFNKAFVLPEFLVVHRFVARPSPTLS 1508
AH T+G + LRRL P +PQ++RC RA NVK FF + Y ++V D++KIEN+ LL FQR A A + VKGLFC VP SL ++++ GM + LV + G E ++ FP+ FSR STLEE RE P + +N R + +++ S S + R LALCRV IGS +V+SA P P+V+S S+ +FDS++ +EY + + VLPEFL+ + + R +PT S
Sbjct: 733 AHETEGRINLRRLTPDNPQYSRCKRATAENVKSDFFGKDANYSGIKVLDVFKIENRPLLRDFQRRAAALKPGSVKGLFCAVPEESLFRIIVEGMGRKTQDAEDTDEAXXXXXXXXXXXXXXXATFLRTHLVALEPEAGSSPGYAEARFLASKPVAFPKQFSRFSTLEEFREAVKAP------------VMGTNTGSRDQHHGQASAVSSSSSSTSQTVPRYLALCRVIIGSSFVTSADYPGF------------------------PNVDSATSS----------KFDSIFSSSLDEYLVLHGHHVLPEFLIRYEYKPRFNPTSS 1011
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A8J2X2L4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2L4_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.830e-23 Identity = 103/314 (32.80%), Postives = 136/314 (43.31%), Query Frame = 3
Query: 423 ESNIRGLILRF---VASVDTAAKCHHCEREMERL------DLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEATESCR-------VKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAHRSAWDED----PIDPLWASRNE--GLVRRVVKGQGEHDTISDTLG-NFPRTFSRHSTLEEEREYANPPDRTRGMREMSVTTICSNGRRRKEDKNPSTSQRSLDEDGSVSGLRLLALCRVTIGSMYVSSAPSLHRAGGDAVAESI 1295
++ + L +R+ VA+ AA+C E ERL +L RLA+ A H T+G LRRL P Q+ARC RAA N + GFF+ P+ + V D++KIEN+ LL+ FQR E ++ R VKGLFC VP S+E++VLYG+ G A + AW D P P AS G V R D FPR FSR+STLE R A G LR+LALCRV +G++ V S DA+ S+
Sbjct: 110 DARLATLAIRYGSVVAAERRAAQCRERVAEAERLKAIDVLELRNRLAAFALHCDHETRGAARLRRLTPRDAQYARCRRAAAENARRGFFAGGGPFAGLDVVDVFKIENRCLLDAFQREVERRKTPRSDEKKIAVKGLFCDVPAASVERLVLYGL----RGDAAPLERTLFDDAWLADQSRTPGAPTAASPGGFGGTVERKPTEVKARRAARDAASLEFPRAFSRYSTLESVRGDARKGGERAGR------------------------------------LRVLALCRVLVGAVRVEEDASTDGPEPDALYSSV 383
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A7S2W257_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W257_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.800e-22 Identity = 102/409 (24.94%), Postives = 169/409 (41.32%), Query Frame = 3
Query: 381 EEFKQRYAQKITRLESNIRGLILRFVASVDT---------AAKCHHCEREMERLDLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEATESCRVKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAHRSAWDEDPIDPLWAS--RNEGLVRRVVKGQGEHDTISDTLGN----------FPRTFSRHSTLEEEREYANPPDRTRGMREMSVTTICSNGRRRKEDKNPSTSQRSLDEDGSVSGLRLLALCRVTIGSMYVSSAPSLHRAGGDAVAESIAVRASVRQEAAPPSVESQPSTVLICPPSGQA--EFDSVYFPREEEYRLFNKAFVLPEFLVVHRFVAR-----PSPTLSPSSVT 1523
E ++++ + +++++ F AS++ A + H + ++ + L A AH T V L+RL T+PQ RC RA NVK FF + S Y + V +++KIEN+ +L++FQ+ A + VKGLFC +P SLE+VV+ GM ++ +ED D + + L +V +D +S FP TFSR+STLE R + D++ + +R LAL RV IG + +S Q P++ P SG + +FDS++ ++EY + N +VLPEFL+ ++F +R P+ + P++ T
Sbjct: 113 ERLREKHYDRAQAMDNDLLTHCAHFAASIEKQCLMLNKQLALEHHRNQIKIANMKKTLELEQFALHLAHETNDQVTLKRLNETNPQFIRCKRACQENVKAEFFGTTSNYSGISVMEVFKIENRPMLKQFQKMAAKLKPGSVKGLFCTIPEESLERVVIQGMRGEKD------------ICKEEDSHDSQGKTVLTGKNLFSQVQYCPFPNDQVSSRFAEERFNRAKDAPFPATFSRYSTLEANRHLME--------------------------------SKQSDQEETTEPVRTLALSRVIIGECFCTS----------------------NQYEGFPNI----------PTSGSSTNKFDSMFSSGQDEYLMLNPNYVLPEFLIRYKFRSRFMTDAPAESTGPATDT 445
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: D0NRW5_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NRW5_PHYIT) HSP 1 Score: 95.5 bits (236), Expect = 2.710e-17 Identity = 76/235 (32.34%), Postives = 109/235 (46.38%), Query Frame = 3
Query: 381 EEFKQRYAQKITRLESNIRGLILRFVASVDTAAKCHHCEREMERL--DLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEA----TESCRVKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAH--------RSAWDEDPIDPLWASRNEGLVRRVVKGQGEHDTISDTLGNFPRTFSRHSTLEE 1043
+ +Q Y Q +T ++ L+ + KC + +R L R S A T G V + RLP + PQ RCV+AAT N+K FFSS P + V ++YKI+N+ LL FQR ++ ++KGLFC++P +S+++ V+YGM + +E H RSA D D S +V G T FPR FSR+STLEE
Sbjct: 138 QTLEQAYKQHVTSDILHLYALLEAESKYITAWNKCEEAKYNDQRALTKLLFRFNSFALQLESETSGQVRMWRLPVSDPQRKRCVKAATENIKKRFFSS--PGQPLEVLEVYKIDNRVLLSNFQRFTDSLSKTNSDIKIKGLFCNLPADSVKRCVVYGMHTAKEKNGEIRFLDPHGAEIKVFSRSALLHDRKDAPGTSMAFRARLKVNNG---------TELQFPRRFSRYSTLEE 361
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: A0A833W6F0_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W6F0_PHYIN) HSP 1 Score: 96.7 bits (239), Expect = 6.090e-17 Identity = 77/235 (32.77%), Postives = 109/235 (46.38%), Query Frame = 3
Query: 381 EEFKQRYAQKITRLESNIRGLILRFVASVDTAAKCHHCEREMERL--DLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQRAAEA----TESCRVKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAH--------RSAWDEDPIDPLWASRNEGLVRRVVKGQGEHDTISDTLGNFPRTFSRHSTLEE 1043
+ +Q Y Q +T ++ L+ + KC + +R L R S A T G V + RLP + PQ RCV+AAT N+K FFSS P + V ++YKI+N+ LL FQR ++ ++KGLFC++P +S+E+ V+YGM + +E H RSA D D S +V G T FPR FSR+STLEE
Sbjct: 138 QTLEQAYKQHVTSDILHLYALLEAESKYITAWNKCEEAKYNDQRALTKLLFRFNSFALQLESETSGQVRMWRLPVSDPQRKRCVKAATENIKKRFFSS--PGQPLEVLEVYKIDNRVLLSNFQRFTDSLSKTNSDIKIKGLFCNLPADSVERCVVYGMHTAKEENGEIRFLDPHGAEIKVFSRSALLHDRKDAPGTSMAFRARFKVNNG---------TELQFPRRFSRYSTLEE 361
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Match: W2PZZ0_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PZZ0_PHYPN) HSP 1 Score: 95.1 bits (235), Expect = 1.800e-16 Identity = 74/246 (30.08%), Postives = 119/246 (48.37%), Query Frame = 3
Query: 375 AVEEFKQRYAQKITRLESNIRGLILRFVASVDTAAKCHH-----------CEREMERLDLAARLASLAATAAHRTQGNVVLRRLPPTHPQHARCVRAATNNVKPGFFSSKSPYGAVRVTDIYKIENKFLLERFQR-AAEATESC---RVKGLFCHVPGNSLEQVVLYGMDSLREGGATGASGSAHRSAWDEDPIDPLWASRNEGLV-RRVVKGQGEHDTISDTLGN-----FPRTFSRHSTLEEER 1049
A++++ Q++ + + + ++ ILR A ++ A+C + C + L + S + T G V + RLP + PQ RCV+AAT N+K FFSS + + V ++YKI+N+ LL FQR + +++C ++KGLFC VP S+E+ ++YGM + G D D + SR+ L R+ G + N FPR FSR++TLEE R
Sbjct: 126 ALDQYLQQFQKLVQAYKQHVTSDILRLYAVLE--AECKYITAWNKREEAKCRDQRVLTKLLFQFNSFSLQLESETSGQVRMWRLPVSDPQRMRCVKAATENIKKHFFSSSEQF--LEVLEVYKIDNRVLLNSFQRFTSSLSKTCSEIKIKGLFCSVPAESVERCIVYGMHAGENG---------EPRFLDPDGAEIKIFSRSVLLQDRKDAPGTNMAFRARSKVNNGTPLQFPRRFSRYNTLEEMR 358 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19664.5485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19664.5485.1 >prot_H-elongata_contig19664.5485.1 ID=prot_H-elongata_contig19664.5485.1|Name=mRNA_H-elongata_contig19664.5485.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=615bp METHRSAAAVSPGKGGGGGNGNGLISLISSASHERRLFRLKKVDRLEMSKback to top mRNA from alignment at H-elongata_contig19664:2012..6047- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19664.5485.1 ID=mRNA_H-elongata_contig19664.5485.1|Name=mRNA_H-elongata_contig19664.5485.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4036bp|location=Sequence derived from alignment at H-elongata_contig19664:2012..6047- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19664:2012..6047- >mRNA_H-elongata_contig19664.5485.1 ID=mRNA_H-elongata_contig19664.5485.1|Name=mRNA_H-elongata_contig19664.5485.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3690bp|location=Sequence derived from alignment at H-elongata_contig19664:2012..6047- (Himanthalia elongata Himel1 dioecious)back to top |