mRNA_H-elongata_contig19539.5445.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: D8LKL8_ECTSI (GPA2, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL8_ECTSI) HSP 1 Score: 566 bits (1460), Expect = 3.040e-202 Identity = 275/319 (86.21%), Postives = 302/319 (94.67%), Query Frame = 1
Query: 1 DNKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGACTFDRGVSYFLEKFNAANTAKKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
DNK EQEKIKLLLLGPGESGKSTIFRQMKLIYG+ISE+DR++LTPVVYANTISTIKM+IK+A YGF KQVVD++++ +IR L++QAPID +VG+AI++LW DPMIQKTWE+RSEYQVIESMKYFLDGMSRIMQP+Y+AT QDILH+RIRSSGIVVDKY IDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRM+EAV LFQGIC+N F+RSSIILFLNKKDLFAEKL TNPI H KEW+DFKGACTFDRGVSYFLEKFNAANTAKKTVYHHVTCATDSENIEVVF+SCKDT+LR NFR
Sbjct: 28 DNKTEQEKIKLLLLGPGESGKSTIFRQMKLIYGVISEDDRVSLTPVVYANTISTIKMVIKKAGFYGFEKQVVDQDAIGLIRSLEDQAPIDEKVGQAITALWGDPMIQKTWEKRSEYQVIESMKYFLDGMSRIMQPEYVATPQDILHIRIRSSGIVVDKYRIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMTEAVNLFQGICSNSYFKRSSIILFLNKKDLFAEKLATNPINHTKEWSDFKGACTFDRGVSYFLEKFNAANTAKKTVYHHVTCATDSENIEVVFNSCKDTILRINFR 346
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A6H5K7D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7D1_9PHAE) HSP 1 Score: 499 bits (1285), Expect = 3.150e-175 Identity = 242/278 (87.05%), Postives = 264/278 (94.96%), Query Frame = 1
Query: 1 DNKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGACTFDRGVSYFLEK 834
DNKAEQEK+KLLLLGPGESGKSTIFRQMKLIYG+ISE+DRI+LTPVVYANTISTIKM+IK+A YGF KQVVD+++M +IR L++QAPID +VG+AI++LW DPMIQKTWE+RSEYQVIESMKYFLDGMSRIMQPQY+AT QDILH+RIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRM+EAV LFQGIC+N FERSSIILFLNKKDLFAEKL TNPI H KEW+DFKGACTFDRGVSYFLEK
Sbjct: 28 DNKAEQEKVKLLLLGPGESGKSTIFRQMKLIYGVISEDDRISLTPVVYANTISTIKMVIKKAGFYGFDKQVVDQDAMRLIRSLEDQAPIDEKVGQAITALWGDPMIQKTWEKRSEYQVIESMKYFLDGMSRIMQPQYVATPQDILHIRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMTEAVNLFQGICSNSCFERSSIILFLNKKDLFAEKLATNPINHTKEWSDFKGACTFDRGVSYFLEK 305
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A836CKU9_9STRA (GPA1, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKU9_9STRA) HSP 1 Score: 387 bits (993), Expect = 3.010e-131 Identity = 188/321 (58.57%), Postives = 249/321 (77.57%), Query Frame = 1
Query: 1 DNKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGACT-FDRGVSYFLEKFNA-ANTAKKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
D + EQ+KI+LLLLGPGESGKSTIFRQMKL+YG I+E++R ++TPVVYAN +ST+K++IK+ ++G+ +++ D+ S EM+ ++ AP+D ++G A+ ++W D +QKTW RR+EYQ++ESM Y+LD + RI P Y+A D+LHVRIRSSG+VVD+Y IDG TFEMYDVGGQRNERKKWIHCFDNVTA+IYVAALSEY+QG++EDA TNRM EA+ LF+ I +NP F SS+ILFLNKKDLF K+ I V ++D+ G + G +YFL+KF A A + + VYHHVTCATD+ ++VV S KDTVLR N +
Sbjct: 29 DFRREQKKIRLLLLGPGESGKSTIFRQMKLLYGEITEDERKSMTPVVYANIVSTMKILIKQCHLFGYGEEIEDQTSAEMLTYCEDTAPVDAELGAAVKAVWADAAVQKTWFRRNEYQIVESMSYYLDSIDRISAPDYVADINDVLHVRIRSSGVVVDRYTIDGFTFEMYDVGGQRNERKKWIHCFDNVTAIIYVAALSEYDQGLYEDAQTNRMVEAISLFREIAHNPFFIHSSLILFLNKKDLFEAKVKVRNIADVPHFSDYGGPRSDHAAGTTYFLKKFLAHARSEDQAVYHHVTCATDTSAMQVVLISTKDTVLRQNLQ 349
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: D7FP05_ECTSI (GPA1, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP05_ECTSI) HSP 1 Score: 384 bits (985), Expect = 4.940e-130 Identity = 184/317 (58.04%), Postives = 248/317 (78.23%), Query Frame = 1
Query: 13 EQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGACTFDR-GVSYFLEKFNAAN-TAKKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
EQEKIKLLLLG GESGKSTIF+QMK+++G++S E++ +TPVVY+NTI ++K+++++A + G + V ES +++ D ++ A ID+++G+AI +W DP + + WERR+EYQ++ES+KYF + M RI Q ++AT QD+L+ R+R+SGIV ++Y IDG+TFEMYDVGGQRNERKKWIHCFDNVTAVI+VAALSEY+Q +FEDA+TNRM+EA+ LF ICNN F SS+ILFLNKKDLFAEK+ I V++WADF G + G +YFL F N ++ VYHHVTCATD+EN+ VF+SCKD +LRSN +
Sbjct: 33 EQEKIKLLLLGAGESGKSTIFKQMKILFGVVSAEEKKQMTPVVYSNTIMSMKILVEQATLLGEEENVACPESFKLVVDCEDSAAIDMELGQAIQDVWSDPAMLRVWERRAEYQIVESVKYFFNEMERIKQDDFVATQQDVLYSRVRTSGIVTERYEIDGSTFEMYDVGGQRNERKKWIHCFDNVTAVIFVAALSEYDQCLFEDASTNRMTEAMDLFNEICNNRFFSESSMILFLNKKDLFAEKIQRVDIKSVEKWADFTGEPRDEEAGKAYFLSLFLKVNQNPEREVYHHVTCATDTENVNFVFNSCKDVILRSNLK 349
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A7S2XUR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUR0_9STRA) HSP 1 Score: 378 bits (971), Expect = 7.040e-128 Identity = 183/320 (57.19%), Postives = 245/320 (76.56%), Query Frame = 1
Query: 7 KAEQEKIKLLLLGPGESGKSTIFRQMKLIYGI-ISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGAC-TFDRGVSYFLEKFNAAN-TAKKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
K EQEKIKLLLLG GESGKSTIF+QMK++YG +++++R +TPVVY NT+S +K + + +G+ +QV KE+++ I LD+ A ID++VG+A+ LW DP I KTW+RR+E+Q++ES+KY+ + + RIMQP Y+A QD+L+ R+R+SGIV ++Y IDG+ FEMYDVGGQRNERKKWIHCFD+VTAVI+VAALSEY+Q +FEDA+TNRM EA+ LF ICNN F SS+ILFLNK+DLFAEK+ I V + DF G F+ GV YFL F N + +YHHVTCATD++N++VVF++CKD +LR N +
Sbjct: 31 KKEQEKIKLLLLGAGESGKSTIFKQMKVLYGDKLTDDERRQITPVVYNNTVSAMKTLTDQTYNFGYDEQVEAKEALKKISLLDDNADIDMEVGQAVKDLWSDPGILKTWDRRAEFQIVESVKYYFNEIDRIMQPDYLANQQDVLYARVRTSGIVTERYMIDGSIFEMYDVGGQRNERKKWIHCFDDVTAVIFVAALSEYDQSLFEDASTNRMVEAIELFAEICNNRYFHNSSMILFLNKRDLFAEKIMVKDIKQVSHFNDFPGGLGDFELGVQYFLNLFLKVNQNPDRVIYHHVTCATDTQNVQVVFNACKDIILRGNLK 350
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: W7U751_9STRA (G-protein complex alpha subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U751_9STRA) HSP 1 Score: 366 bits (940), Expect = 3.430e-123 Identity = 176/321 (54.83%), Postives = 247/321 (76.95%), Query Frame = 1
Query: 7 KAEQEKIKLLLLGPGESGKSTIFRQMKLIYGI-ISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGAC-TFDRGVSYFLEKFNAANTA--KKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
K EQEKIKLLLLG GESGKSTIF+QMKL+YG + ED+ +TPVVYANTI +++++++ +G+ +++D++++++I + + ID+++G AI +LW+D IQKTW RRSE+Q++ES+KY+ + + I +P Y+A+ DIL+ R+R+SGIV ++Y IDGT FEMYDVGGQRNERKKWIHCFDNVTA+I+VAALSEY+Q +FED++TNRM EA+ LF+ ICNN F SS++LFLNKKDLFAEK+ I V +++D+KG FD GV YF+ F N +K +Y+HVTCATD++N+EVV ++CKD + R N +
Sbjct: 31 KKEQEKIKLLLLGAGESGKSTIFKQMKLLYGAGTTLEDKKMMTPVVYANTICAMRILLEQCKQFGYDSEILDQDAIDLINTIPD-TDIDLKIGSAIKTLWKDDAIQKTWARRSEFQIVESVKYYFNKIDEISEPDYLASDDDILYARVRTSGIVTERYMIDGTMFEMYDVGGQRNERKKWIHCFDNVTAIIFVAALSEYDQVLFEDSSTNRMIEAIQLFKEICNNKFFANSSMLLFLNKKDLFAEKIWVKDIKGVPQFSDYKGCLGDFDAGVDYFVNLFLGVNDRPNEKIIYNHVTCATDTKNVEVVMNACKDIITRGNLK 350
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A836CAY4_9STRA (GPA1, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY4_9STRA) HSP 1 Score: 350 bits (899), Expect = 5.460e-117 Identity = 166/317 (52.37%), Postives = 236/317 (74.45%), Query Frame = 1
Query: 13 EQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGAC-TFDRGVSYFLEKFNAANT-AKKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
E+EKIKLLLLG GESGKST+F+QMK++YG++++E++ + PVVY NT+ ++K ++ + +++ VV +E+ ++ DE A ID+ +G A+ +LW DP I WERRSE+Q++ES+K++ + RIMQP Y+ + QD+L+ R+R+SGIV ++Y ID TTFEMYDVGGQRNERKKWIHCFD+VTAVI+V+ALSEY+Q +FEDA TNRM EA+ LF ICNN F+ SS+ILFLNKKDL+ +K+ I + ++DF G ++G+ YF F A NT + +Y +VTCATD++N+ VFS+CKD +LR N +
Sbjct: 33 EREKIKLLLLGAGESGKSTVFKQMKILYGVMTDEEKRQIRPVVYNNTLVSMKTLVDQVSIWNLDGTVVAQEAFHTVKATDEAAVIDVALGTALKALWVDPGILGVWERRSEFQIVESVKFYFGELDRIMQPDYLPSQQDVLYARVRTSGIVTERYEIDSTTFEMYDVGGQRNERKKWIHCFDDVTAVIFVSALSEYDQSLFEDATTNRMVEAIELFGEICNNRYFQDSSMILFLNKKDLYEDKIKKVDIKSIDAFSDFPGGLGDAEKGIEYFTGLFLAVNTNPARCIYSYVTCATDTDNVNKVFSACKDIILRGNLK 349
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A835YQV5_9STRA (GPA1, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV5_9STRA) HSP 1 Score: 350 bits (899), Expect = 5.460e-117 Identity = 166/321 (51.71%), Postives = 235/321 (73.21%), Query Frame = 1
Query: 1 DNKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKG-ACTFDRGVSYFLEKFNAANTA-KKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
D + EQEK+KLLLLG GESGKSTIF+QMK+++G+I++EDR LTP+VY NTI +K ++ + Q+ ++ E ++ +E A ID +G+A+ +W DP++Q WE+++EYQ++ES+K+F D + RI Y AT QD+++ R+R++GIV D+Y IDGTTFEMYDVGGQRNERKKWIHCFDNVTAV++VA++SEY+Q +FEDANTNR++EA+ LF CNN F+ SSIIL LNK+DL+ K+ I V + D+ G A D G+ YF++KF A + KK +Y HV CATD++N++ VF +CKD +L+ + R
Sbjct: 29 DFRKEQEKVKLLLLGAGESGKSTIFKQMKILHGVITDEDRRLLTPIVYQNTIIAMKTLVAQVEHRNLEGQLRAVDAFETVKSCEESAVIDPPLGKALKEVWNDPVVQGVWEKQAEYQIVESVKFFFDALDRISAADYTATPQDMVYTRVRTTGIVTDRYVIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVLFVASISEYDQSLFEDANTNRVNEALTLFADTCNNKYFQSSSIILLLNKRDLYEAKVKKVAINSVPAFKDYSGPAKDVDAGIKYFMDKFLAQKGSFKKDIYVHVVCATDTQNVDRVFGACKDIILKDSLR 349
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A835ZE70_9STRA (GPA1, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE70_9STRA) HSP 1 Score: 347 bits (891), Expect = 9.200e-116 Identity = 167/321 (52.02%), Postives = 236/321 (73.52%), Query Frame = 1
Query: 1 DNKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGA-CTFDRGVSYFLEKFNAANTA-KKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
D + EQEK+KLLLLG GESGKSTIF+QMK+++G+I+EEDR +TPVV+ NT+ +K ++ + QV + + ++ D+ A ID ++G+A+ ++W+DP++Q+ WE+++E+Q+ ES+KYF D M RI P Y AT QD+++ R+R++GIV D+Y IDGTTFEMYDVGGQRNERKKWIHCFD VTAV++VA+LSEY+Q +FEDA+TNR++EA+ LF CNN F SSIILFLNK+DLF K+ I + + DF G + + G+ YF++KF A A +K +Y HV CATD+EN+ VFS+C D +L+ + R
Sbjct: 30 DFRKEQEKVKLLLLGAGESGKSTIFKQMKILHGVITEEDRRLMTPVVHQNTLLAMKTLVGQVEARSLQGQVAAAAAFDTVKTCDDTAVIDTELGKALKAVWQDPVVQRVWEKQAEFQIEESVKYFFDDMDRISGPGYTATPQDMVYTRVRTTGIVTDRYVIDGTTFEMYDVGGQRNERKKWIHCFDAVTAVLFVASLSEYDQKLFEDASTNRVTEALSLFADTCNNKYFHNSSIILFLNKRDLFEAKVLKVSIKSIPSFIDFGGPEQSAEAGIKYFMDKFLAQKGAFRKDIYVHVVCATDTENVNRVFSACTDIILKDSLR 350
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Match: A0A485L3B6_9STRA (Aste57867_14988 protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485L3B6_9STRA) HSP 1 Score: 347 bits (889), Expect = 1.730e-115 Identity = 166/321 (51.71%), Postives = 240/321 (74.77%), Query Frame = 1
Query: 4 NKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGI-ISEEDRINLTPVVYANTISTIKMIIKRAAVYGFSKQVVDKESMEMIRDLDEQAPIDIQVGEAISSLWEDPMIQKTWERRSEYQVIESMKYFLDGMSRIMQPQYIATSQDILHVRIRSSGIVVDKYCIDGTTFEMYDVGGQRNERKKWIHCFDNVTAVIYVAALSEYNQGMFEDANTNRMSEAVILFQGICNNPVFERSSIILFLNKKDLFAEKLPTNPIGHVKEWADFKGAC-TFDRGVSYFLEKFNAANTA-KKTVYHHVTCATDSENIEVVFSSCKDTVLRSNFR 957
++ EQEK+KLLLLG GESGKSTIF+QMK++YG+ ++EE+R + TP+VY N +++IK+++ + +V E + I+ + ++ ++ +VG+ I +LW DP + TW RR+E+Q++ES+K++ + + RIM+ Y+ T QD+L+ R+R+SGIV +KY IDG TF MYDVGGQRNERKKWIHCF++VT+VI+VAALSEY+Q ++ED++TNRM EA+ LF I NN F S++ILFLNKKDLF EK+ I ++ + DF G FD+GV+YFL KF N +K +YHHVTCATDS+N++VVF++CKD +L+ N R
Sbjct: 28 HRLEQEKVKLLLLGAGESGKSTIFKQMKILYGMPLTEEERRHCTPIVYNNIVTSIKILLDQCVELQLKSEVKCIEDFDEIKAISDETEVNPKVGQKIKNLWTDPGVAATWARRAEFQIVESVKFYFNDIDRIMKDDYMVTQQDMLYARVRTSGIVEEKYQIDGATFVMYDVGGQRNERKKWIHCFEDVTSVIFVAALSEYDQSLYEDSSTNRMIEAITLFDEIVNNRFFSNSAMILFLNKKDLFEEKVKKIDIKSIEVFKDFPGGLGDFDKGVTYFLSKFLEMNRQPEKEIYHHVTCATDSQNVQVVFNACKDIILKQNIR 348 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19539.5445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19539.5445.1 >prot_H-elongata_contig19539.5445.1 ID=prot_H-elongata_contig19539.5445.1|Name=mRNA_H-elongata_contig19539.5445.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=327bp DNKAEQEKIKLLLLGPGESGKSTIFRQMKLIYGIISEEDRINLTPVVYANback to top mRNA from alignment at H-elongata_contig19539:1370..5269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19539.5445.1 ID=mRNA_H-elongata_contig19539.5445.1|Name=mRNA_H-elongata_contig19539.5445.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3900bp|location=Sequence derived from alignment at H-elongata_contig19539:1370..5269+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19539:1370..5269+ >mRNA_H-elongata_contig19539.5445.1 ID=mRNA_H-elongata_contig19539.5445.1|Name=mRNA_H-elongata_contig19539.5445.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1962bp|location=Sequence derived from alignment at H-elongata_contig19539:1370..5269+ (Himanthalia elongata Himel1 dioecious)back to top |